| Clone Name | basd27p10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190481.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2532 Score = 456 bits (230), Expect = e-125 Identities = 357/399 (89%), Gaps = 1/399 (0%) Strand = Plus / Plus Query: 4 gcgatttacccaggtaaacgtgctctctcttcacatgaagaagccaccgggtttcaagta 63 |||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 1612 gcgatttacccagg-aaatgtgctctctcttcacatgaagaagccgccgggtttcaagta 1670 Query: 64 caagagtgggatgtacctgtttgtgaaatgccctgacgtttcgnctttcgaatggcatcc 123 |||||| |||||||||||||||||||| |||||||| || || |||||||||||||||| Sbjct: 1671 caagagcgggatgtacctgtttgtgaagtgccctgatgtctctcctttcgaatggcatcc 1730 Query: 124 gttctccatcacttctgcacctggagatgattacctgagcgtgcatatccgcacgctagg 183 ||||||||||||||||||||||||||||| |||||||| ||||||||||| || ||||| Sbjct: 1731 cttctccatcacttctgcacctggagatgactacctgagtgtgcatatccgtacactagg 1790 Query: 184 tgactggacatctgaactcaggaacttgttcgggaagtgttgngaggcacaagttacttc 243 ||||||||| |||||||||| ||| |||| |||||| ||| |||||||| |||||||| Sbjct: 1791 tgactggacgactgaactcagaaacctgtttgggaaggcttgcgaggcacaggttacttc 1850 Query: 244 caagaaggctaccctttcgagacttgaaactacagttgtggcagactctacgacagaaga 303 ||||||||||||||||| ||||||||||||||||||||||| ||| || |||||| || Sbjct: 1851 taagaaggctaccctttcaagacttgaaactacagttgtggcggacgctcagacagagga 1910 Query: 304 caccaggtttcctaaggtctttatcgatggcccttatggngcaccggcgcaaaattacaa 363 || ||||||||||||||| |||| ||||| || ||||| |||||||||||||| ||||| Sbjct: 1911 tactaggtttcctaaggtccttattgatgggccctatggtgcaccggcgcaaaactacaa 1970 Query: 364 gaaatacgacattcttttgcttatcggtcttgggattgg 402 ||| || ||||||||||||||||| |||||||| ||||| Sbjct: 1971 gaagtatgacattcttttgcttattggtcttggaattgg 2009
>dbj|AK100241.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054P13, full insert sequence Length = 2899 Score = 456 bits (230), Expect = e-125 Identities = 357/399 (89%), Gaps = 1/399 (0%) Strand = Plus / Plus Query: 4 gcgatttacccaggtaaacgtgctctctcttcacatgaagaagccaccgggtttcaagta 63 |||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 1761 gcgatttacccagg-aaatgtgctctctcttcacatgaagaagccgccgggtttcaagta 1819 Query: 64 caagagtgggatgtacctgtttgtgaaatgccctgacgtttcgnctttcgaatggcatcc 123 |||||| |||||||||||||||||||| |||||||| || || |||||||||||||||| Sbjct: 1820 caagagcgggatgtacctgtttgtgaagtgccctgatgtctctcctttcgaatggcatcc 1879 Query: 124 gttctccatcacttctgcacctggagatgattacctgagcgtgcatatccgcacgctagg 183 ||||||||||||||||||||||||||||| |||||||| ||||||||||| || ||||| Sbjct: 1880 cttctccatcacttctgcacctggagatgactacctgagtgtgcatatccgtacactagg 1939 Query: 184 tgactggacatctgaactcaggaacttgttcgggaagtgttgngaggcacaagttacttc 243 ||||||||| |||||||||| ||| |||| |||||| ||| |||||||| |||||||| Sbjct: 1940 tgactggacgactgaactcagaaacctgtttgggaaggcttgcgaggcacaggttacttc 1999 Query: 244 caagaaggctaccctttcgagacttgaaactacagttgtggcagactctacgacagaaga 303 ||||||||||||||||| ||||||||||||||||||||||| ||| || |||||| || Sbjct: 2000 taagaaggctaccctttcaagacttgaaactacagttgtggcggacgctcagacagagga 2059 Query: 304 caccaggtttcctaaggtctttatcgatggcccttatggngcaccggcgcaaaattacaa 363 || ||||||||||||||| |||| ||||| || ||||| |||||||||||||| ||||| Sbjct: 2060 tactaggtttcctaaggtccttattgatgggccctatggtgcaccggcgcaaaactacaa 2119 Query: 364 gaaatacgacattcttttgcttatcggtcttgggattgg 402 ||| || ||||||||||||||||| |||||||| ||||| Sbjct: 2120 gaagtatgacattcttttgcttattggtcttggaattgg 2158
>dbj|AK068400.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151M04, full insert sequence Length = 2525 Score = 456 bits (230), Expect = e-125 Identities = 357/399 (89%), Gaps = 1/399 (0%) Strand = Plus / Plus Query: 4 gcgatttacccaggtaaacgtgctctctcttcacatgaagaagccaccgggtttcaagta 63 |||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 1387 gcgatttacccagg-aaatgtgctctctcttcacatgaagaagccgccgggtttcaagta 1445 Query: 64 caagagtgggatgtacctgtttgtgaaatgccctgacgtttcgnctttcgaatggcatcc 123 |||||| |||||||||||||||||||| |||||||| || || |||||||||||||||| Sbjct: 1446 caagagcgggatgtacctgtttgtgaagtgccctgatgtctctcctttcgaatggcatcc 1505 Query: 124 gttctccatcacttctgcacctggagatgattacctgagcgtgcatatccgcacgctagg 183 ||||||||||||||||||||||||||||| |||||||| ||||||||||| || ||||| Sbjct: 1506 cttctccatcacttctgcacctggagatgactacctgagtgtgcatatccgtacactagg 1565 Query: 184 tgactggacatctgaactcaggaacttgttcgggaagtgttgngaggcacaagttacttc 243 ||||||||| |||||||||| ||| |||| |||||| ||| |||||||| |||||||| Sbjct: 1566 tgactggacgactgaactcagaaacctgtttgggaaggcttgcgaggcacaggttacttc 1625 Query: 244 caagaaggctaccctttcgagacttgaaactacagttgtggcagactctacgacagaaga 303 ||||||||||||||||| ||||||||||||||||||||||| ||| || |||||| || Sbjct: 1626 taagaaggctaccctttcaagacttgaaactacagttgtggcggacgctcagacagagga 1685 Query: 304 caccaggtttcctaaggtctttatcgatggcccttatggngcaccggcgcaaaattacaa 363 || ||||||||||||||| |||| ||||| || ||||| |||||||||||||| ||||| Sbjct: 1686 tactaggtttcctaaggtccttattgatgggccctatggtgcaccggcgcaaaactacaa 1745 Query: 364 gaaatacgacattcttttgcttatcggtcttgggattgg 402 ||| || ||||||||||||||||| |||||||| ||||| Sbjct: 1746 gaagtatgacattcttttgcttattggtcttggaattgg 1784
>dbj|AK066013.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047I12, full insert sequence Length = 2195 Score = 456 bits (230), Expect = e-125 Identities = 357/399 (89%), Gaps = 1/399 (0%) Strand = Plus / Plus Query: 4 gcgatttacccaggtaaacgtgctctctcttcacatgaagaagccaccgggtttcaagta 63 |||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 1035 gcgatttacccagg-aaatgtgctctctcttcacatgaagaagccgccgggtttcaagta 1093 Query: 64 caagagtgggatgtacctgtttgtgaaatgccctgacgtttcgnctttcgaatggcatcc 123 |||||| |||||||||||||||||||| |||||||| || || |||||||||||||||| Sbjct: 1094 caagagcgggatgtacctgtttgtgaagtgccctgatgtctctcctttcgaatggcatcc 1153 Query: 124 gttctccatcacttctgcacctggagatgattacctgagcgtgcatatccgcacgctagg 183 ||||||||||||||||||||||||||||| |||||||| ||||||||||| || ||||| Sbjct: 1154 cttctccatcacttctgcacctggagatgactacctgagtgtgcatatccgtacactagg 1213 Query: 184 tgactggacatctgaactcaggaacttgttcgggaagtgttgngaggcacaagttacttc 243 ||||||||| |||||||||| ||| |||| |||||| ||| |||||||| |||||||| Sbjct: 1214 tgactggacgactgaactcagaaacctgtttgggaaggcttgcgaggcacaggttacttc 1273 Query: 244 caagaaggctaccctttcgagacttgaaactacagttgtggcagactctacgacagaaga 303 ||||||||||||||||| ||||||||||||||||||||||| ||| || |||||| || Sbjct: 1274 taagaaggctaccctttcaagacttgaaactacagttgtggcggacgctcagacagagga 1333 Query: 304 caccaggtttcctaaggtctttatcgatggcccttatggngcaccggcgcaaaattacaa 363 || ||||||||||||||| |||| ||||| || ||||| |||||||||||||| ||||| Sbjct: 1334 tactaggtttcctaaggtccttattgatgggccctatggtgcaccggcgcaaaactacaa 1393 Query: 364 gaaatacgacattcttttgcttatcggtcttgggattgg 402 ||| || ||||||||||||||||| |||||||| ||||| Sbjct: 1394 gaagtatgacattcttttgcttattggtcttggaattgg 1432
>gb|AY107416.1| Zea mays PCO107390 mRNA sequence Length = 1867 Score = 280 bits (141), Expect = 3e-72 Identities = 315/374 (84%) Strand = Plus / Plus Query: 23 gtgctctctcttcacatgaagaagccaccgggtttcaagtacaagagtgggatgtacctg 82 ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 699 gtgctctctattcacatgaagaagccacagggtttcaagtacaagagtgggatgtatctg 758 Query: 83 tttgtgaaatgccctgacgtttcgnctttcgaatggcatccgttctccatcacttctgca 142 ||||| |||||||| || || ||| | ||||| ||||| || ||||| || ||||| ||| Sbjct: 759 tttgttaaatgcccagaagtctcgcccttcgagtggcaccccttctctataacttcggca 818 Query: 143 cctggagatgattacctgagcgtgcatatccgcacgctaggtgactggacatctgaactc 202 || || ||||| ||| |||| ||||||||||| ||||| |||||||||||||| ||||| Sbjct: 819 ccaggcgatgactacttgagtgtgcatatccgtacgctgggtgactggacatccgaactg 878 Query: 203 aggaacttgttcgggaagtgttgngaggcacaagttacttccaagaaggctaccctttcg 262 ||| | || |||||| ||| |||||||||| ||||||||||||||||||||| | Sbjct: 879 cggatgctttttgggaaggcttgccaggcacaagtaacttccaagaaggctacccttaca 938 Query: 263 agacttgaaactacagttgtggcagactctacgacagaagacaccaggtttcctaaggtc 322 ||||||||||||||||||||||||||| | |||||| ||||| |||||||| |||||| Sbjct: 939 agacttgaaactacagttgtggcagacgcccagacagaggacactaggtttcccaaggtc 998 Query: 323 tttatcgatggcccttatggngcaccggcgcaaaattacaagaaatacgacattcttttg 382 | || || || || || || ||||| || |||||||||| |||||| ||||||||| || Sbjct: 999 tacatagacgggccatacggtgcaccagcacaaaattacaggaaatatgacattcttctg 1058 Query: 383 cttatcggtcttgg 396 ||||| || ||||| Sbjct: 1059 cttattggccttgg 1072
>ref|XM_475388.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2205 Score = 192 bits (97), Expect = 6e-46 Identities = 212/251 (84%) Strand = Plus / Plus Query: 23 gtgctctctcttcacatgaagaagccaccgggtttcaagtacaagagtgggatgtacctg 82 ||||||||| |||||||||| || ||| | ||||||||||||| ||||||||||| || Sbjct: 1555 gtgctctctattcacatgaataaaccatcaagtttcaagtacaaaagtgggatgtatatg 1614 Query: 83 tttgtgaaatgccctgacgtttcgnctttcgaatggcatccgttctccatcacttctgca 142 ||||| |||||||| || |||||| |||| ||||||||||| |||||||| ||||||||| Sbjct: 1615 tttgtaaaatgcccagatgtttcgccttttgaatggcatcccttctccataacttctgca 1674 Query: 143 cctggagatgattacctgagcgtgcatatccgcacgctaggtgactggacatctgaactc 202 ||||||||||| ||| |||| || |||||||| || |||||||||||||| | ||||| Sbjct: 1675 cctggagatgactacttgagtgttcatatccgtacattaggtgactggacaacagaactt 1734 Query: 203 aggaacttgttcgggaagtgttgngaggcacaagttacttccaagaaggctaccctttcg 262 || ||| | || |||||| ||| ||||||||||| | ||||||||||||||| ||| | Sbjct: 1735 agaaacctatttgggaaggcttgtgaggcacaagtaagttccaagaaggctacacttgca 1794 Query: 263 agacttgaaac 273 |||||||||| Sbjct: 1795 cgacttgaaac 1805 Score = 89.7 bits (45), Expect = 7e-15 Identities = 80/92 (86%) Strand = Plus / Plus Query: 311 tttcctaaggtctttatcgatggcccttatggngcaccggcgcaaaattacaagaaatac 370 ||||| || |||||||| ||||| |||| || ||||| || ||||||||||||||||| Sbjct: 1843 tttcccaaagtctttatagatggtcctttcggcgcaccagctcaaaattacaagaaatat 1902 Query: 371 gacattcttttgcttatcggtcttgggattgg 402 |||||||||||||||||||| ||||| ||||| Sbjct: 1903 gacattcttttgcttatcgggcttggaattgg 1934
>dbj|AK072353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055G12, full insert sequence Length = 2954 Score = 192 bits (97), Expect = 6e-46 Identities = 212/251 (84%) Strand = Plus / Plus Query: 23 gtgctctctcttcacatgaagaagccaccgggtttcaagtacaagagtgggatgtacctg 82 ||||||||| |||||||||| || ||| | ||||||||||||| ||||||||||| || Sbjct: 1684 gtgctctctattcacatgaataaaccatcaagtttcaagtacaaaagtgggatgtatatg 1743 Query: 83 tttgtgaaatgccctgacgtttcgnctttcgaatggcatccgttctccatcacttctgca 142 ||||| |||||||| || |||||| |||| ||||||||||| |||||||| ||||||||| Sbjct: 1744 tttgtaaaatgcccagatgtttcgccttttgaatggcatcccttctccataacttctgca 1803 Query: 143 cctggagatgattacctgagcgtgcatatccgcacgctaggtgactggacatctgaactc 202 ||||||||||| ||| |||| || |||||||| || |||||||||||||| | ||||| Sbjct: 1804 cctggagatgactacttgagtgttcatatccgtacattaggtgactggacaacagaactt 1863 Query: 203 aggaacttgttcgggaagtgttgngaggcacaagttacttccaagaaggctaccctttcg 262 || ||| | || |||||| ||| ||||||||||| | ||||||||||||||| ||| | Sbjct: 1864 agaaacctatttgggaaggcttgtgaggcacaagtaagttccaagaaggctacacttgca 1923 Query: 263 agacttgaaac 273 |||||||||| Sbjct: 1924 cgacttgaaac 1934 Score = 81.8 bits (41), Expect = 2e-12 Identities = 79/92 (85%) Strand = Plus / Plus Query: 311 tttcctaaggtctttatcgatggcccttatggngcaccggcgcaaaattacaagaaatac 370 ||||| || |||||||| ||||| |||| || ||||| || |||||||||||||| || Sbjct: 1972 tttcccaaagtctttatagatggtcctttcggcgcaccagctcaaaattacaagaagtat 2031 Query: 371 gacattcttttgcttatcggtcttgggattgg 402 |||||||||||||||||||| ||||| ||||| Sbjct: 2032 gacattcttttgcttatcgggcttggaattgg 2063
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 151 bits (76), Expect = 2e-33 Identities = 106/115 (92%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 4 gcgatttacccaggtaaacgtgctctctcttcacatgaagaagccaccgggtttcaagta 63 |||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 35809145 gcgatttacccagg-aaatgtgctctctcttcacatgaagaagccgccgggtttcaagta 35809203 Query: 64 caagagtgggatgtacctgtttgtgaaatgccctgacgtttcgnctttcgaatgg 118 |||||| |||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 35809204 caagagcgggatgtacctgtttgtgaagtgccctgatgtctctcctttcgaatgg 35809258 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 117 ggcatccgttctccatcacttctgcacctggagatgattacctgagcgtgcatatccgca 176 ||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| | Sbjct: 35809344 ggcatcccttctccatcacttctgcacctggagatgactacctgagtgtgcatatccgta 35809403 Query: 177 cgctaggtgactggacatctgaactcaggaacttgttcgggaag 220 | |||||||||||||| |||||||||| ||| |||| |||||| Sbjct: 35809404 cactaggtgactggacgactgaactcagaaacctgtttgggaag 35809447 Score = 113 bits (57), Expect = 5e-22 Identities = 86/96 (89%) Strand = Plus / Plus Query: 307 caggtttcctaaggtctttatcgatggcccttatggngcaccggcgcaaaattacaagaa 366 |||||||||||||||| |||| ||||| || ||||| |||||||||||||| |||||||| Sbjct: 35809747 caggtttcctaaggtccttattgatgggccctatggtgcaccggcgcaaaactacaagaa 35809806 Query: 367 atacgacattcttttgcttatcggtcttgggattgg 402 || ||||||||||||||||| |||||||| ||||| Sbjct: 35809807 gtatgacattcttttgcttattggtcttggaattgg 35809842 Score = 95.6 bits (48), Expect = 1e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 223 ttgngaggcacaagttacttccaagaaggctaccctttcgagacttgaaactacagttgt 282 ||| |||||||| |||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 35809572 ttgcgaggcacaggttacttctaagaaggctaccctttcaagacttgaaactacagttgt 35809631 Query: 283 ggc 285 ||| Sbjct: 35809632 ggc 35809634 Score = 42.1 bits (21), Expect = 1.4 Identities = 51/61 (83%) Strand = Plus / Minus Query: 117 ggcatccgttctccatcacttctgcacctggagatgattacctgagcgtgcatatccgca 176 ||||||| || ||||| || || ||||||||||||||||| || || || ||||| |||| Sbjct: 14605700 ggcatccattttccataacatcagcacctggagatgattatcttagtgttcatattcgca 14605641 Query: 177 c 177 | Sbjct: 14605640 c 14605640
>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506B12 Length = 170759 Score = 151 bits (76), Expect = 2e-33 Identities = 106/115 (92%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 4 gcgatttacccaggtaaacgtgctctctcttcacatgaagaagccaccgggtttcaagta 63 |||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 73603 gcgatttacccagg-aaatgtgctctctcttcacatgaagaagccgccgggtttcaagta 73661 Query: 64 caagagtgggatgtacctgtttgtgaaatgccctgacgtttcgnctttcgaatgg 118 |||||| |||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 73662 caagagcgggatgtacctgtttgtgaagtgccctgatgtctctcctttcgaatgg 73716 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 117 ggcatccgttctccatcacttctgcacctggagatgattacctgagcgtgcatatccgca 176 ||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| | Sbjct: 73802 ggcatcccttctccatcacttctgcacctggagatgactacctgagtgtgcatatccgta 73861 Query: 177 cgctaggtgactggacatctgaactcaggaacttgttcgggaag 220 | |||||||||||||| |||||||||| ||| |||| |||||| Sbjct: 73862 cactaggtgactggacgactgaactcagaaacctgtttgggaag 73905 Score = 113 bits (57), Expect = 5e-22 Identities = 86/96 (89%) Strand = Plus / Plus Query: 307 caggtttcctaaggtctttatcgatggcccttatggngcaccggcgcaaaattacaagaa 366 |||||||||||||||| |||| ||||| || ||||| |||||||||||||| |||||||| Sbjct: 74205 caggtttcctaaggtccttattgatgggccctatggtgcaccggcgcaaaactacaagaa 74264 Query: 367 atacgacattcttttgcttatcggtcttgggattgg 402 || ||||||||||||||||| |||||||| ||||| Sbjct: 74265 gtatgacattcttttgcttattggtcttggaattgg 74300 Score = 95.6 bits (48), Expect = 1e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 223 ttgngaggcacaagttacttccaagaaggctaccctttcgagacttgaaactacagttgt 282 ||| |||||||| |||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 74030 ttgcgaggcacaggttacttctaagaaggctaccctttcaagacttgaaactacagttgt 74089 Query: 283 ggc 285 ||| Sbjct: 74090 ggc 74092
>dbj|AK119267.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-A07, full insert sequence Length = 3154 Score = 151 bits (76), Expect = 2e-33 Identities = 106/115 (92%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 4 gcgatttacccaggtaaacgtgctctctcttcacatgaagaagccaccgggtttcaagta 63 |||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 1751 gcgatttacccagg-aaatgtgctctctcttcacatgaagaagccgccgggtttcaagta 1693 Query: 64 caagagtgggatgtacctgtttgtgaaatgccctgacgtttcgnctttcgaatgg 118 |||||| |||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1692 caagagcgggatgtacctgtttgtgaagtgccctgatgtctctcctttcgaatgg 1638 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 117 ggcatccgttctccatcacttctgcacctggagatgattacctgagcgtgcatatccgca 176 ||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| | Sbjct: 1552 ggcatcccttctccatcacttctgcacctggagatgactacctgagtgtgcatatccgta 1493 Query: 177 cgctaggtgactggacatctgaactcaggaacttgttcgggaag 220 | |||||||||||||| |||||||||| ||| |||| |||||| Sbjct: 1492 cactaggtgactggacgactgaactcagaaacctgtttgggaag 1449
>gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009E21, complete sequence Length = 153214 Score = 89.7 bits (45), Expect = 7e-15 Identities = 80/92 (86%) Strand = Plus / Plus Query: 311 tttcctaaggtctttatcgatggcccttatggngcaccggcgcaaaattacaagaaatac 370 ||||| || |||||||| ||||| |||| || ||||| || ||||||||||||||||| Sbjct: 73786 tttcccaaagtctttatagatggtcctttcggcgcaccagctcaaaattacaagaaatat 73845 Query: 371 gacattcttttgcttatcggtcttgggattgg 402 |||||||||||||||||||| ||||| ||||| Sbjct: 73846 gacattcttttgcttatcgggcttggaattgg 73877 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 117 ggcatccgttctccatcacttctgcacctggagatgattacctgagcgtgcatatccgca 176 ||||||| |||||||| |||||||||||||||||||| ||| |||| || |||||||| | Sbjct: 73368 ggcatcccttctccataacttctgcacctggagatgactacttgagtgttcatatccgta 73427 Query: 177 cgctaggtgactggaca 193 | |||||||||||||| Sbjct: 73428 cattaggtgactggaca 73444 Score = 81.8 bits (41), Expect = 2e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 23 gtgctctctcttcacatgaagaagccaccgggtttcaagtacaagagtgggatgtacctg 82 ||||||||| |||||||||| || ||| | ||||||||||||| ||||||||||| || Sbjct: 73198 gtgctctctattcacatgaataaaccatcaagtttcaagtacaaaagtgggatgtatatg 73257 Query: 83 tttgtgaaatgccctgacgtttcgnctttcgaatgg 118 ||||| |||||||| || |||||| |||| |||||| Sbjct: 73258 tttgtaaaatgcccagatgtttcgccttttgaatgg 73293 Score = 48.1 bits (24), Expect = 0.022 Identities = 44/51 (86%) Strand = Plus / Plus Query: 223 ttgngaggcacaagttacttccaagaaggctaccctttcgagacttgaaac 273 ||| ||||||||||| | ||||||||||||||| ||| | |||||||||| Sbjct: 73593 ttgtgaggcacaagtaagttccaagaaggctacacttgcacgacttgaaac 73643
>gb|AC108503.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1387_F08, complete sequence Length = 141535 Score = 89.7 bits (45), Expect = 7e-15 Identities = 80/92 (86%) Strand = Plus / Plus Query: 311 tttcctaaggtctttatcgatggcccttatggngcaccggcgcaaaattacaagaaatac 370 ||||| || |||||||| ||||| |||| || ||||| || ||||||||||||||||| Sbjct: 28144 tttcccaaagtctttatagatggtcctttcggcgcaccagctcaaaattacaagaaatat 28203 Query: 371 gacattcttttgcttatcggtcttgggattgg 402 |||||||||||||||||||| ||||| ||||| Sbjct: 28204 gacattcttttgcttatcgggcttggaattgg 28235 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 117 ggcatccgttctccatcacttctgcacctggagatgattacctgagcgtgcatatccgca 176 ||||||| |||||||| |||||||||||||||||||| ||| |||| || |||||||| | Sbjct: 27726 ggcatcccttctccataacttctgcacctggagatgactacttgagtgttcatatccgta 27785 Query: 177 cgctaggtgactggaca 193 | |||||||||||||| Sbjct: 27786 cattaggtgactggaca 27802 Score = 81.8 bits (41), Expect = 2e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 23 gtgctctctcttcacatgaagaagccaccgggtttcaagtacaagagtgggatgtacctg 82 ||||||||| |||||||||| || ||| | ||||||||||||| ||||||||||| || Sbjct: 27556 gtgctctctattcacatgaataaaccatcaagtttcaagtacaaaagtgggatgtatatg 27615 Query: 83 tttgtgaaatgccctgacgtttcgnctttcgaatgg 118 ||||| |||||||| || |||||| |||| |||||| Sbjct: 27616 tttgtaaaatgcccagatgtttcgccttttgaatgg 27651 Score = 48.1 bits (24), Expect = 0.022 Identities = 44/51 (86%) Strand = Plus / Plus Query: 223 ttgngaggcacaagttacttccaagaaggctaccctttcgagacttgaaac 273 ||| ||||||||||| | ||||||||||||||| ||| | |||||||||| Sbjct: 27951 ttgtgaggcacaagtaagttccaagaaggctacacttgcacgacttgaaac 28001
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 89.7 bits (45), Expect = 7e-15 Identities = 80/92 (86%) Strand = Plus / Plus Query: 311 tttcctaaggtctttatcgatggcccttatggngcaccggcgcaaaattacaagaaatac 370 ||||| || |||||||| ||||| |||| || ||||| || ||||||||||||||||| Sbjct: 22718587 tttcccaaagtctttatagatggtcctttcggcgcaccagctcaaaattacaagaaatat 22718646 Query: 371 gacattcttttgcttatcggtcttgggattgg 402 |||||||||||||||||||| ||||| ||||| Sbjct: 22718647 gacattcttttgcttatcgggcttggaattgg 22718678 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 117 ggcatccgttctccatcacttctgcacctggagatgattacctgagcgtgcatatccgca 176 ||||||| |||||||| |||||||||||||||||||| ||| |||| || |||||||| | Sbjct: 22718169 ggcatcccttctccataacttctgcacctggagatgactacttgagtgttcatatccgta 22718228 Query: 177 cgctaggtgactggaca 193 | |||||||||||||| Sbjct: 22718229 cattaggtgactggaca 22718245 Score = 81.8 bits (41), Expect = 2e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 23 gtgctctctcttcacatgaagaagccaccgggtttcaagtacaagagtgggatgtacctg 82 ||||||||| |||||||||| || ||| | ||||||||||||| ||||||||||| || Sbjct: 22717999 gtgctctctattcacatgaataaaccatcaagtttcaagtacaaaagtgggatgtatatg 22718058 Query: 83 tttgtgaaatgccctgacgtttcgnctttcgaatgg 118 ||||| |||||||| || |||||| |||| |||||| Sbjct: 22718059 tttgtaaaatgcccagatgtttcgccttttgaatgg 22718094 Score = 48.1 bits (24), Expect = 0.022 Identities = 44/51 (86%) Strand = Plus / Plus Query: 223 ttgngaggcacaagttacttccaagaaggctaccctttcgagacttgaaac 273 ||| ||||||||||| | ||||||||||||||| ||| | |||||||||| Sbjct: 22718394 ttgtgaggcacaagtaagttccaagaaggctacacttgcacgacttgaaac 22718444
>ref|NM_124165.2| Arabidopsis thaliana RBOHD (RESPIRATORY BURST OXIDASE PROTEIN D) AT5G47910 (RBOHD) mRNA, complete cds Length = 3201 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 110 ttcgaatggcatccgttctccatcacttctgcacctggagatgattacctgagcgtgcat 169 |||||||||||||| ||||| ||||| || || || ||||| |||||||||||||| ||| Sbjct: 2111 ttcgaatggcatcctttctcaatcacatcagctcccggagacgattacctgagcgtacat 2170 Query: 170 atccgcacgctaggtgactggaca 193 |||||||| || |||||||||||| Sbjct: 2171 atccgcactctcggtgactggaca 2194
>gb|AF424625.1|AF424625 Arabidopsis thaliana AT5g47910/MCA23_25 mRNA, complete cds Length = 2999 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 110 ttcgaatggcatccgttctccatcacttctgcacctggagatgattacctgagcgtgcat 169 |||||||||||||| ||||| ||||| || || || ||||| |||||||||||||| ||| Sbjct: 2111 ttcgaatggcatcctttctcaatcacatcagctcccggagacgattacctgagcgtacat 2170 Query: 170 atccgcacgctaggtgactggaca 193 |||||||| || |||||||||||| Sbjct: 2171 atccgcactctcggtgactggaca 2194
>gb|BT002651.1| Arabidopsis thaliana At5g47910/MCA23_25 gene, complete cds Length = 2766 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 110 ttcgaatggcatccgttctccatcacttctgcacctggagatgattacctgagcgtgcat 169 |||||||||||||| ||||| ||||| || || || ||||| |||||||||||||| ||| Sbjct: 1969 ttcgaatggcatcctttctcaatcacatcagctcccggagacgattacctgagcgtacat 2028 Query: 170 atccgcacgctaggtgactggaca 193 |||||||| || |||||||||||| Sbjct: 2029 atccgcactctcggtgactggaca 2052
>dbj|AB016886.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCA23 Length = 82503 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 110 ttcgaatggcatccgttctccatcacttctgcacctggagatgattacctgagcgtgcat 169 |||||||||||||| ||||| ||||| || || || ||||| |||||||||||||| ||| Sbjct: 78102 ttcgaatggcatcctttctcaatcacatcagctcccggagacgattacctgagcgtacat 78161 Query: 170 atccgcacgctaggtgactggaca 193 |||||||| || |||||||||||| Sbjct: 78162 atccgcactctcggtgactggaca 78185
>gb|AF055357.1|AF055357 Arabidopsis thaliana respiratory burst oxidase protein D (RbohD) mRNA, complete cds Length = 3035 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 110 ttcgaatggcatccgttctccatcacttctgcacctggagatgattacctgagcgtgcat 169 |||||||||||||| ||||| ||||| || || || ||||| |||||||||||||| ||| Sbjct: 2100 ttcgaatggcatcctttctcaatcacatcagctcccggagacgattacctgagcgtacat 2159 Query: 170 atccgcacgctaggtgactggaca 193 |||||||| || |||||||||||| Sbjct: 2160 atccgcactctcggtgactggaca 2183
>ref|NM_114450.2| Arabidopsis thaliana calcium ion binding / oxidoreductase/ superoxide-generating NADPH oxidase AT3G45810 mRNA, complete cds Length = 2739 Score = 85.7 bits (43), Expect = 1e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 56 ttcaagtacaagagtgggatgtacctgtttgtgaaatgccctgacgtttcgnctttcgaa 115 ||||||||||| ||||| |||||| ||||||| || |||||||| | || |||||| Sbjct: 1768 ttcaagtacaaaagtggcatgtacatgtttgtcaagtgccctgatatctccaaattcgaa 1827 Query: 116 tggcatccgttctccatcacttctgcacctggagatga 153 |||||||| |||||||||||||||||||| |||||||| Sbjct: 1828 tggcatccattctccatcacttctgcacccggagatga 1865
>dbj|AK120739.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003N01, full insert sequence Length = 3515 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 110 ttcgaatggcatccgttctccatcacttctgcacctggagatgattacct 159 |||||||||||||| |||||||||||||| || ||||||||||| ||||| Sbjct: 2331 ttcgaatggcatcccttctccatcacttcagctcctggagatgactacct 2380
>ref|NM_125394.1| Arabidopsis thaliana calcium ion binding / oxidoreductase/ superoxide-generating NADPH oxidase AT5G60010 mRNA, complete cds Length = 2520 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 113 gaatggcatccgttctccatcacttctgcacctggagatga 153 ||||||||||| |||||||||||||||||||| |||||||| Sbjct: 1795 gaatggcatccattctccatcacttctgcaccaggagatga 1835
>ref|NM_202070.1| Arabidopsis thaliana ATRBOHB; calcium ion binding / oxidoreductase AT1G09090 (ATRBOHB) transcript variant AT1G09090.2 mRNA, complete cds Length = 2627 Score = 60.0 bits (30), Expect = 6e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 114 aatggcatccgttctccatcacttctgcacctggagatgattacctgagcgtgcatatcc 173 ||||||||||||| || || ||||| || | || ||||||||||| ||||| ||||||| Sbjct: 1746 aatggcatccgttttcaattacttcggcttccggggatgattacctcagcgttcatatcc 1805 Query: 174 gcacgctaggtgactggacatc 195 |||| || || ||||||||||| Sbjct: 1806 gcacactcggagactggacatc 1827
>ref|NM_100780.3| Arabidopsis thaliana ATRBOHB; calcium ion binding / oxidoreductase AT1G09090 (ATRBOHB) transcript variant AT1G09090.1 mRNA, complete cds Length = 2701 Score = 60.0 bits (30), Expect = 6e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 114 aatggcatccgttctccatcacttctgcacctggagatgattacctgagcgtgcatatcc 173 ||||||||||||| || || ||||| || | || ||||||||||| ||||| ||||||| Sbjct: 1746 aatggcatccgttttcaattacttcggcttccggggatgattacctcagcgttcatatcc 1805 Query: 174 gcacgctaggtgactggacatc 195 |||| || || ||||||||||| Sbjct: 1806 gcacactcggagactggacatc 1827
>emb|BX816700.1|CNS0ADX6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH63ZH03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2590 Score = 60.0 bits (30), Expect = 6e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 114 aatggcatccgttctccatcacttctgcacctggagatgattacctgagcgtgcatatcc 173 ||||||||||||| || || ||||| || | || ||||||||||| ||||| ||||||| Sbjct: 1732 aatggcatccgttttcaattacttcggcttccggggatgattacctcagcgttcatatcc 1791 Query: 174 gcacgctaggtgactggacatc 195 |||| || || ||||||||||| Sbjct: 1792 gcacactcggagactggacatc 1813
>gb|BT005716.1| Arabidopsis thaliana clone RAFL14-97-K04 (R20129) putative respiratory burst oxidase protein B (At1g09090) mRNA, complete cds Length = 2721 Score = 60.0 bits (30), Expect = 6e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 114 aatggcatccgttctccatcacttctgcacctggagatgattacctgagcgtgcatatcc 173 ||||||||||||| || || ||||| || | || ||||||||||| ||||| ||||||| Sbjct: 1747 aatggcatccgttttcaattacttcggcttccggggatgattacctcagcgttcatatcc 1806 Query: 174 gcacgctaggtgactggacatc 195 |||| || || ||||||||||| Sbjct: 1807 gcacactcggagactggacatc 1828
>emb|AL162459.2|ATF16L2 Arabidopsis thaliana DNA chromosome 3, BAC clone F16L2 Length = 111338 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 117 ggcatccgttctccatcacttctgcacctggagatga 153 ||||||| |||||||||||||||||||| |||||||| Sbjct: 31272 ggcatccattctccatcacttctgcacccggagatga 31236 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Minus Query: 56 ttcaagtacaagagtgggatgtacctgtttgtgaaatgccctga 99 ||||||||||| ||||| |||||| ||||||| || |||||||| Sbjct: 31427 ttcaagtacaaaagtggcatgtacatgtttgtcaagtgccctga 31384
>dbj|AB015475.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMN10 Length = 84325 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 117 ggcatccgttctccatcacttctgcacctggagatga 153 ||||||| |||||||||||||||||||| |||||||| Sbjct: 76594 ggcatccattctccatcacttctgcaccaggagatga 76630
>gb|BT009552.1| Triticum aestivum clone wr1.pk178.b5:fis, full insert mRNA sequence Length = 2312 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 113 gaatggcatccgttctccatcacttctgcacctggagatgattacct 159 ||||||||||| ||||||||||| || || ||||||||||| ||||| Sbjct: 297 gaatggcatcctttctccatcacctcagctcctggagatgactacct 343
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 117 ggcatccgttctccatcacttctgcacctggagatgattacct 159 ||||||| |||||||||||||| || ||||||||||| ||||| Sbjct: 16140821 ggcatcccttctccatcacttcagctcctggagatgactacct 16140863
>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556H01 Length = 149800 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 117 ggcatccgttctccatcacttctgcacctggagatgattacct 159 ||||||| |||||||||||||| || ||||||||||| ||||| Sbjct: 45422 ggcatcccttctccatcacttcagctcctggagatgactacct 45464
>dbj|AP005833.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1328_D07 Length = 155007 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 117 ggcatccgttctccatcacttctgcacctggagatgattacct 159 ||||||| |||||||||||||| || ||||||||||| ||||| Sbjct: 141034 ggcatcccttctccatcacttcagctcctggagatgactacct 141076
>gb|AF055354.1|AF055354 Arabidopsis thaliana respiratory burst oxidase protein B (RbohB) gene, complete cds Length = 3917 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 149 gatgattacctgagcgtgcatatccgcacgctaggtgactggacatc 195 ||||||||||| ||||| ||||||||||| || || ||||||||||| Sbjct: 2816 gatgattacctcagcgttcatatccgcacactcggagactggacatc 2862
>gb|AC000106.1|F7G19 Sequence of BAC F7G19 from Arabidopsis thaliana chromosome 1, complete sequence Length = 110514 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 149 gatgattacctgagcgtgcatatccgcacgctaggtgactggacatc 195 ||||||||||| ||||| ||||||||||| || || ||||||||||| Sbjct: 7690 gatgattacctcagcgttcatatccgcacactcggagactggacatc 7644
>dbj|AP006656.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT05H03, TM0342a, complete sequence Length = 57652 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 125 ttctccatcacttctgcacctggagatgattacctgagcgtgcatat 171 ||||||||||| ||||||||||||||||| ||| |||| || ||||| Sbjct: 32580 ttctccatcacctctgcacctggagatgactacttgagtgtccatat 32626 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 125 ttctccatcacttctgcacctggagatgattacctgagcgtgcatat 171 ||||||||||| ||| ||||||||||||| ||| |||| || ||||| Sbjct: 45216 ttctccatcacctcttcacctggagatgactacttgagtgtccatat 45262
>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08, complete sequence Length = 197156 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 44 aagccaccgggtttcaagtacaagagtggg 73 ||||||| |||||||||||||||||||||| Sbjct: 192173 aagccacagggtttcaagtacaagagtggg 192144
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 44 aagccaccgggtttcaagtacaagagtggg 73 ||||||| |||||||||||||||||||||| Sbjct: 31528 aagccacagggtttcaagtacaagagtggg 31499
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 44 aagccaccgggtttcaagtacaagagtggg 73 ||||||| |||||||||||||||||||||| Sbjct: 18928157 aagccacagggtttcaagtacaagagtggg 18928128
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 44 aagccaccgggtttcaagtacaagagtggg 73 ||||||| |||||||||||||||||||||| Sbjct: 19086979 aagccacagggtttcaagtacaagagtggg 19086950
>gb|AY603975.1| Oryza sativa (indica cultivar-group) respiratory burst oxidase protein B (rbohB) mRNA, complete cds Length = 3334 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 113 gaatggcatccgttctccatcacttctgcacctggagatgattacctgagcgtgcatatc 172 ||||||||||| || ||||| || || ||||||||||||||||| || || || ||||| Sbjct: 2204 gaatggcatccattttccataacatcagcacctggagatgattatcttagtgttcatatt 2263 Query: 173 cgcac 177 ||||| Sbjct: 2264 cgcac 2268
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 125 ttctccatcacttctgcacctggagatga 153 |||||||||||||| |||||||||||||| Sbjct: 22210879 ttctccatcacttcagcacctggagatga 22210907
>dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0048G02 Length = 155542 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 125 ttctccatcacttctgcacctggagatga 153 |||||||||||||| |||||||||||||| Sbjct: 27255 ttctccatcacttcagcacctggagatga 27283
>dbj|AK121916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106C16, full insert sequence Length = 3255 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 113 gaatggcatccgttctccatcacttctgcacctggagatgattacctgagcgtgcatatc 172 ||||||||||| || ||||| || || ||||||||||||||||| || || || ||||| Sbjct: 2277 gaatggcatccattttccataacatcagcacctggagatgattatcttagtgttcatatt 2336 Query: 173 cgcac 177 ||||| Sbjct: 2337 cgcac 2341
>dbj|AK099714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084G19, full insert sequence Length = 3731 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 113 gaatggcatccgttctccatcacttctgcacctggagatgattacctgagcgtgcatatc 172 ||||||||||| || ||||| || || ||||||||||||||||| || || || ||||| Sbjct: 2796 gaatggcatccattttccataacatcagcacctggagatgattatcttagtgttcatatt 2855 Query: 173 cgcac 177 ||||| Sbjct: 2856 cgcac 2860
>gb|AF088279.1|AF088279 Potamogeton crispus NADPH oxidase (RBOH1) gene, partial cds Length = 900 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 117 ggcatccgttctccatcacttctgcacctggagatga 153 ||||||| ||||| |||||||| |||||||||||||| Sbjct: 146 ggcatcctttctcgatcacttcagcacctggagatga 182
>dbj|AK060770.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B03, full insert sequence Length = 2978 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Plus Query: 113 gaatggcatccgttctccatcacttctgcacctggagatgattacctgagcgtgcatatc 172 ||||||||||| || ||||| || || ||||||||||||||||| || || || ||||| Sbjct: 1917 gaatggcatccattttccataacatcagcacctggagatgattatcttagtgttcatatt 1976 Query: 173 cgcac 177 ||||| Sbjct: 1977 cgcac 1981
>dbj|AB050661.1| Solanum tuberosum StrbohB mRNA for respiratory burst oxidase homolog, complete cds Length = 2856 Score = 50.1 bits (25), Expect = 0.006 Identities = 39/44 (88%) Strand = Plus / Plus Query: 329 gatggcccttatggngcaccggcgcaaaattacaagaaatacga 372 |||||||||||||| ||||| || || |||||||||||||||| Sbjct: 2146 gatggcccttatggagcaccagcacaggattacaagaaatacga 2189
>gb|AY109999.1| Zea mays CL562_1 mRNA sequence Length = 2590 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Plus Query: 113 gaatggcatccgttctccatcacttctgcacctggagatgatta 156 ||||||||||||||||| || ||||| || ||||| |||||||| Sbjct: 1118 gaatggcatccgttctcaattacttcagcgcctggggatgatta 1161
>ref|NM_191558.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2832 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 113 gaatggcatccgttctccatcacttctgcacctggagatgattacct 159 ||||||||||| ||||| || ||||| |||||||| ||||| ||||| Sbjct: 1984 gaatggcatcccttctcaattacttcagcacctggggatgactacct 2030
>gb|AF015302.1|AF015302 Oryza sativa RbohAOsp mRNA, partial cds Length = 2782 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 113 gaatggcatccgttctccatcacttctgcacctggagatgattacct 159 ||||||||||| ||||| || ||||| |||||||| ||||| ||||| Sbjct: 1391 gaatggcatcccttctcaattacttcagcacctggggatgactacct 1437
>emb|X93301.1|OSRBOHA O.sativa mRNA for NAD(P)H oxidase Length = 2198 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 113 gaatggcatccgttctccatcacttctgcacctggagatgattacct 159 ||||||||||| ||||| || ||||| |||||||| ||||| ||||| Sbjct: 925 gaatggcatcccttctcaattacttcagcacctggggatgactacct 971
>dbj|AK103747.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138P16, full insert sequence Length = 2070 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 113 gaatggcatccgttctccatcacttctgcacctggagatgattacct 159 ||||||||||| ||||| || ||||| |||||||| ||||| ||||| Sbjct: 765 gaatggcatcccttctcaattacttcagcacctggggatgactacct 811
>gb|AC092238.2| Drosophila melanogaster clone BACR03D18, complete sequence Length = 184681 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 38 atgaagaagccaccgggtttca 59 |||||||||||||||||||||| Sbjct: 62539 atgaagaagccaccgggtttca 62560
>gb|DQ124226.1| Fagus sylvatica putative respiratory burst oxidase mRNA, partial cds Length = 752 Score = 44.1 bits (22), Expect = 0.35 Identities = 67/82 (81%) Strand = Plus / Plus Query: 114 aatggcatccgttctccatcacttctgcacctggagatgattacctgagcgtgcatatcc 173 |||||||||| || || || ||||| || || || |||||||| || ||| | ||||| | Sbjct: 319 aatggcatcctttttcaattacttcggccccgggggatgattatctaagcatccatatac 378 Query: 174 gcacgctaggtgactggacatc 195 |||| |||||||||||||||| Sbjct: 379 gcaccttaggtgactggacatc 400
>ref|NM_078844.2| Drosophila melanogaster lethal (2) 35Bd CG3688-RA (l(2)35Bd), mRNA Length = 1775 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 atgaagaagccaccgggtttca 59 |||||||||||||||||||||| Sbjct: 844 atgaagaagccaccgggtttca 823
>gb|AY071407.1| Drosophila melanogaster RE49394 full length cDNA Length = 1780 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 atgaagaagccaccgggtttca 59 |||||||||||||||||||||| Sbjct: 844 atgaagaagccaccgggtttca 823
>gb|AE003646.3| Drosophila melanogaster chromosome 2L, section 55 of 83 of the complete sequence Length = 265413 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 atgaagaagccaccgggtttca 59 |||||||||||||||||||||| Sbjct: 10569 atgaagaagccaccgggtttca 10548
>ref|NM_106085.1| Arabidopsis thaliana heat shock protein binding / nucleic acid binding / unfolded protein binding / zinc ion binding AT1G74250 mRNA, complete cds Length = 1893 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 367 atacgacattcttttgcttat 387 ||||||||||||||||||||| Sbjct: 1315 atacgacattcttttgcttat 1295
>gb|AC166333.9| Mus musculus chromosome 1, clone RP23-395A13, complete sequence Length = 188044 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 188 tggacatctgaactcaggaacttgt 212 |||| |||||||||||||||||||| Sbjct: 33955 tggagatctgaactcaggaacttgt 33931 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 188 tggacatctgaactcaggaacttgt 212 |||| |||||||||||||||||||| Sbjct: 30533 tggagatctgaactcaggaacttgt 30509
>dbj|AB059744.1| Solanum tuberosum rboh mRNA for respiratory burst oxydase, partial cds Length = 3039 Score = 42.1 bits (21), Expect = 1.4 Identities = 42/49 (85%) Strand = Plus / Plus Query: 108 ctttcgaatggcatccgttctccatcacttctgcacctggagatgatta 156 |||| ||||||||||| || || || |||||||| |||| ||||||||| Sbjct: 1997 cttttgaatggcatcctttttctattacttctgctcctgaagatgatta 2045
>ref|XM_395437.2| PREDICTED: Apis mellifera similar to G kinase anchoring protein 1 (LOC411970), mRNA Length = 757 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 352 gcaaaattacaagaaatacga 372 ||||||||||||||||||||| Sbjct: 602 gcaaaattacaagaaatacga 622
>gb|AC084292.23|AC084292 Mus musculus 1 BAC RP23-254E8 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 192003 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 188 tggacatctgaactcaggaacttgt 212 |||| |||||||||||||||||||| Sbjct: 181830 tggagatctgaactcaggaacttgt 181806 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 188 tggacatctgaactcaggaacttgt 212 |||| |||||||||||||||||||| Sbjct: 178408 tggagatctgaactcaggaacttgt 178384
>gb|AC020579.5|AC020579 Arabidopsis thaliana chromosome 1 BAC F1O17 genomic sequence, complete sequence Length = 50821 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 367 atacgacattcttttgcttat 387 ||||||||||||||||||||| Sbjct: 31313 atacgacattcttttgcttat 31333
>dbj|AP003444.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1164G11 Length = 142699 Score = 42.1 bits (21), Expect = 1.4 Identities = 51/61 (83%) Strand = Plus / Minus Query: 117 ggcatccgttctccatcacttctgcacctggagatgattacctgagcgtgcatatccgca 176 ||||||| || ||||| || || ||||||||||||||||| || || || ||||| |||| Sbjct: 87077 ggcatccattttccataacatcagcacctggagatgattatcttagtgttcatattcgca 87018 Query: 177 c 177 | Sbjct: 87017 c 87017
>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0514H03 Length = 167230 Score = 42.1 bits (21), Expect = 1.4 Identities = 51/61 (83%) Strand = Plus / Minus Query: 117 ggcatccgttctccatcacttctgcacctggagatgattacctgagcgtgcatatccgca 176 ||||||| || ||||| || || ||||||||||||||||| || || || ||||| |||| Sbjct: 165013 ggcatccattttccataacatcagcacctggagatgattatcttagtgttcatattcgca 164954 Query: 177 c 177 | Sbjct: 164953 c 164953
>dbj|AK120905.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031D09, full insert sequence Length = 3489 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 113 gaatggcatccgttctccatcacttctgcacctggagatga 153 ||||||||||| ||||| || ||||| |||||||| ||||| Sbjct: 2097 gaatggcatcccttctcaataacttcggcacctggggatga 2137
>dbj|AK065117.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O12, full insert sequence Length = 3198 Score = 42.1 bits (21), Expect = 1.4 Identities = 54/65 (83%) Strand = Plus / Plus Query: 113 gaatggcatccgttctccatcacttctgcacctggagatgattacctgagcgtgcatatc 172 ||||||||||| || ||||| | || ||||||||||||||||| || || || ||||| Sbjct: 2280 gaatggcatccattttccataaaatcagcacctggagatgattatcttagtgttcatatt 2339 Query: 173 cgcac 177 ||||| Sbjct: 2340 cgcac 2344
>emb|AL590381.4| Human DNA sequence from clone RP11-373O10 on chromosome 9, complete sequence Length = 182430 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 gaagacaccaggtttcctaaggtc 322 ||||||||||| |||||||||||| Sbjct: 34424 gaagacaccagttttcctaaggtc 34401
>emb|AL157883.15| Human DNA sequence from clone RP11-360J12 on chromosome 9q21.12-21.32 Contains an orthodenticle homolog 2 (Drosophila) (OTX2) pseudogene, complete sequence Length = 176870 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 ctctctcttcacatgaagaagcca 49 ||||||||| |||||||||||||| Sbjct: 17941 ctctctctttacatgaagaagcca 17964
>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16 Length = 349841 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 caggaacttgttcgggaagt 221 |||||||||||||||||||| Sbjct: 196535 caggaacttgttcgggaagt 196516
>gb|AC108116.2| Homo sapiens chromosome 5 clone RP11-318B23, complete sequence Length = 203171 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 acatctgaactcaggaacttgttc 214 |||| ||||||||||||||||||| Sbjct: 55477 acatttgaactcaggaacttgttc 55500
>gb|AC091939.3| Homo sapiens chromosome 5 clone RP11-32D16, complete sequence Length = 190346 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cctgtttgtgaaatgccctg 98 |||||||||||||||||||| Sbjct: 34984 cctgtttgtgaaatgccctg 34965
>gb|AC010414.8| Homo sapiens chromosome 5 clone CTD-2169P11, complete sequence Length = 145156 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cctgtttgtgaaatgccctg 98 |||||||||||||||||||| Sbjct: 60935 cctgtttgtgaaatgccctg 60916
>gb|AC010254.6| Homo sapiens chromosome 5 clone CTC-434O11, complete sequence Length = 172300 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cctgtttgtgaaatgccctg 98 |||||||||||||||||||| Sbjct: 28684 cctgtttgtgaaatgccctg 28703
>gb|AC154678.2| Mus musculus BAC clone RP24-302G10 from chromosome 16, complete sequence Length = 198982 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 ctgaactcaggaacttgttc 214 |||||||||||||||||||| Sbjct: 68344 ctgaactcaggaacttgttc 68363
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 caggaacttgttcgggaagt 221 |||||||||||||||||||| Sbjct: 7852403 caggaacttgttcgggaagt 7852384
>gb|AF190364.1|AF190364 Eucalyptus tetragona 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 728 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 acccaggtaaacgtgctctc 30 |||||||||||||||||||| Sbjct: 418 acccaggtaaacgtgctctc 399
>emb|CR450791.5| Zebrafish DNA sequence from clone CH211-39A7 in linkage group 19, complete sequence Length = 72657 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 atgtacctgtttgtgaaatg 93 |||||||||||||||||||| Sbjct: 36337 atgtacctgtttgtgaaatg 36318
>dbj|AP004933.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT10J03, TM0094b, complete sequence Length = 65726 Score = 40.1 bits (20), Expect = 5.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 137 tctgcacctggagatgattacctgagcgtgcatatccgcacgctaggtgactggac 192 ||||| || |||||||| ||||| ||||| || ||| | || |||||||||||||| Sbjct: 41720 tctgccccaggagatgactaccttagcgttcacatcagaacactaggtgactggac 41665
>emb|AL731671.15| Mouse DNA sequence from clone RP23-235I24 on chromosome 2, complete sequence Length = 90624 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 ctggacatctgaactcagga 206 |||||||||||||||||||| Sbjct: 76615 ctggacatctgaactcagga 76634 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,768,146 Number of Sequences: 3902068 Number of extensions: 2768146 Number of successful extensions: 46319 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 46064 Number of HSP's gapped (non-prelim): 248 length of query: 405 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 383 effective length of database: 17,147,199,772 effective search space: 6567377512676 effective search space used: 6567377512676 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)