ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd27o21 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY641433.1| Triticum aestivum eukaryotic translation initiation factor 3 subunit g mRNA, partial cds Length = 455 Score = 446 bits (225), Expect = e-122 Identities = 381/427 (89%), Gaps = 7/427 (1%) Strand = Plus / Plus Query: 126 ccgtgtgacaaatctgtcagaggacacccgtgagcctgacctcctcgagctgttccgcac 185 |||||| || |||||||| ||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 10 ccgtgttaccaatctgtctgaggacacccgcgagcccgacctcctcgagctgttccgcac 69 Query: 186 gtttggtgctgtcagccgtgtctacgtcgcggtggatcagaagactggaatgagcagggg 245 |||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 70 gtttggcccggtcagccgtgtctatgtcgcggtggatcagaagactggaatgagcagggg 129 Query: 246 cttcggtttcgtcaactttgtccacagggaggacgctgagaaggccatcagcaagctcaa 305 ||| || || ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 130 ctttgggtttgtcaactttgttcacagggaggacgccgagaaggccatcagcaagctcaa 189 Query: 306 tgggtatggttatgataaccttatcctccatgtggagatggctgcacctagacctactta 365 ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 190 tgggtatggttatgataacctcatcctccatgtggagatggctgcacctaggcctactta 249 Query: 366 gttactgcctactaagcattcagatatcc--caagtgtc--atggttatgctctccgcat 421 ||||||||||||||||||| ||||| ||| |||||||| || ||||| |||||| | Sbjct: 250 gttactgcctactaagcatccagatttcctacaagtgtcgtatcattatggtctccgaaa 309 Query: 422 tatcagttc-tttttgtcgtaaacttgtgtcttgttttgccttgttgagaataacaacac 480 || | || | ||| |||||| | |||||||| ||||||||||||||||||||||| |||| Sbjct: 310 tacccgtacgtttgtgtcgtgagcttgtgtcatgttttgccttgttgagaataactacac 369 Query: 481 tctgtttggccaaaaagtgaattccgtaaggactgg-acttgagtttatatttcatcaag 539 |||| ||| |||||||||||| | ||||| ||| ||||||||||||||||||||||| Sbjct: 370 tctg-gtggtgaaaaagtgaatttcttaagggatggcacttgagtttatatttcatcaag 428 Query: 540 ttttgta 546 |||||| Sbjct: 429 ctttgta 435
>ref|XM_468182.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1150 Score = 283 bits (143), Expect = 3e-73 Identities = 215/239 (89%) Strand = Plus / Plus Query: 94 gacatgaggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacc 153 ||||||||||| |||||||| |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 692 gacatgaggcgtaggaatgatgagaactctgtccgtgtgaccaatctatcagaggacacc 751 Query: 154 cgtgagcctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtc 213 ||||| || ||||| || ||||| |||||||| |||||| | || |||||||||||||| Sbjct: 752 cgtgaacccgacctacttgagctattccgcacatttggtccagttagccgtgtctacgtt 811 Query: 214 gcggtggatcagaagactggaatgagcaggggcttcggtttcgtcaactttgtccacagg 273 ||||||||||||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 812 gcggtggatcagaagactggagcaagcagggggttcggcttcgtcaactttgttcacaga 871 Query: 274 gaggacgctgagaaggccatcagcaagctcaatgggtatggttatgataaccttatcct 332 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 872 gaggacgctgagaaggctatcagcaagctcaatggttatggttatgataaccttatcct 930
>ref|XM_507016.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0054K20.22 mRNA Length = 1154 Score = 283 bits (143), Expect = 3e-73 Identities = 215/239 (89%) Strand = Plus / Plus Query: 94 gacatgaggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacc 153 ||||||||||| |||||||| |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 708 gacatgaggcgtaggaatgatgagaactctgtccgtgtgaccaatctatcagaggacacc 767 Query: 154 cgtgagcctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtc 213 ||||| || ||||| || ||||| |||||||| |||||| | || |||||||||||||| Sbjct: 768 cgtgaacccgacctacttgagctattccgcacatttggtccagttagccgtgtctacgtt 827 Query: 214 gcggtggatcagaagactggaatgagcaggggcttcggtttcgtcaactttgtccacagg 273 ||||||||||||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 828 gcggtggatcagaagactggagcaagcagggggttcggcttcgtcaactttgttcacaga 887 Query: 274 gaggacgctgagaaggccatcagcaagctcaatgggtatggttatgataaccttatcct 332 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 888 gaggacgctgagaaggctatcagcaagctcaatggttatggttatgataaccttatcct 946
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 283 bits (143), Expect = 3e-73 Identities = 215/239 (89%) Strand = Plus / Plus Query: 94 gacatgaggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacc 153 ||||||||||| |||||||| |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 33513810 gacatgaggcgtaggaatgatgagaactctgtccgtgtgaccaatctatcagaggacacc 33513869 Query: 154 cgtgagcctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtc 213 ||||| || ||||| || ||||| |||||||| |||||| | || |||||||||||||| Sbjct: 33513870 cgtgaacccgacctacttgagctattccgcacatttggtccagttagccgtgtctacgtt 33513929 Query: 214 gcggtggatcagaagactggaatgagcaggggcttcggtttcgtcaactttgtccacagg 273 ||||||||||||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 33513930 gcggtggatcagaagactggagcaagcagggggttcggcttcgtcaactttgttcacaga 33513989 Query: 274 gaggacgctgagaaggccatcagcaagctcaatgggtatggttatgataaccttatcct 332 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 33513990 gaggacgctgagaaggctatcagcaagctcaatggttatggttatgataaccttatcct 33514048 Score = 71.9 bits (36), Expect = 2e-09 Identities = 183/232 (78%) Strand = Plus / Plus Query: 101 ggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacccgtgagc 160 |||| ||||| ||||||||||| ||||| || || || ||||| ||||||||||| ||| Sbjct: 33511097 ggcggaggaacgacgagaactcggtccgcgtcaccaacctgtcggaggacacccgcgagg 33511156 Query: 161 ctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtcgcggtgg 220 ||||||| |||||||||| ||| || || | ||| ||| | ||||||||| ||| Sbjct: 33511157 aagacctccgcgagctgttcggcagcttcggcccgctcacccgcgcgtacgtcgcgttgg 33511216 Query: 221 atcagaagactggaatgagcaggggcttcggtttcgtcaactttgtccacagggaggacg 280 |||| ||| || ||||||||| ||||| ||| ||| ||| ||| |||||||||||| Sbjct: 33511217 atcaccggaccggggagagcagggggttcggcttcctcagcttcgtctacagggaggacg 33511276 Query: 281 ctgagaaggccatcagcaagctcaatgggtatggttatgataaccttatcct 332 | |||| ||||||| ||||||||||| ||||| || |||| ||| ||||| Sbjct: 33511277 ccgagagggccatcgctaagctcaatggctatggctacgatagcctcatcct 33511328
>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0054K20 Length = 153584 Score = 283 bits (143), Expect = 3e-73 Identities = 215/239 (89%) Strand = Plus / Plus Query: 94 gacatgaggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacc 153 ||||||||||| |||||||| |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 88685 gacatgaggcgtaggaatgatgagaactctgtccgtgtgaccaatctatcagaggacacc 88744 Query: 154 cgtgagcctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtc 213 ||||| || ||||| || ||||| |||||||| |||||| | || |||||||||||||| Sbjct: 88745 cgtgaacccgacctacttgagctattccgcacatttggtccagttagccgtgtctacgtt 88804 Query: 214 gcggtggatcagaagactggaatgagcaggggcttcggtttcgtcaactttgtccacagg 273 ||||||||||||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 88805 gcggtggatcagaagactggagcaagcagggggttcggcttcgtcaactttgttcacaga 88864 Query: 274 gaggacgctgagaaggccatcagcaagctcaatgggtatggttatgataaccttatcct 332 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 88865 gaggacgctgagaaggctatcagcaagctcaatggttatggttatgataaccttatcct 88923 Score = 71.9 bits (36), Expect = 2e-09 Identities = 183/232 (78%) Strand = Plus / Plus Query: 101 ggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacccgtgagc 160 |||| ||||| ||||||||||| ||||| || || || ||||| ||||||||||| ||| Sbjct: 85972 ggcggaggaacgacgagaactcggtccgcgtcaccaacctgtcggaggacacccgcgagg 86031 Query: 161 ctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtcgcggtgg 220 ||||||| |||||||||| ||| || || | ||| ||| | ||||||||| ||| Sbjct: 86032 aagacctccgcgagctgttcggcagcttcggcccgctcacccgcgcgtacgtcgcgttgg 86091 Query: 221 atcagaagactggaatgagcaggggcttcggtttcgtcaactttgtccacagggaggacg 280 |||| ||| || ||||||||| ||||| ||| ||| ||| ||| |||||||||||| Sbjct: 86092 atcaccggaccggggagagcagggggttcggcttcctcagcttcgtctacagggaggacg 86151 Query: 281 ctgagaaggccatcagcaagctcaatgggtatggttatgataaccttatcct 332 | |||| ||||||| ||||||||||| ||||| || |||| ||| ||||| Sbjct: 86152 ccgagagggccatcgctaagctcaatggctatggctacgatagcctcatcct 86203
>dbj|AK103497.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131A11, full insert sequence Length = 1154 Score = 283 bits (143), Expect = 3e-73 Identities = 215/239 (89%) Strand = Plus / Plus Query: 94 gacatgaggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacc 153 ||||||||||| |||||||| |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 708 gacatgaggcgtaggaatgatgagaactctgtccgtgtgaccaatctatcagaggacacc 767 Query: 154 cgtgagcctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtc 213 ||||| || ||||| || ||||| |||||||| |||||| | || |||||||||||||| Sbjct: 768 cgtgaacccgacctacttgagctattccgcacatttggtccagttagccgtgtctacgtt 827 Query: 214 gcggtggatcagaagactggaatgagcaggggcttcggtttcgtcaactttgtccacagg 273 ||||||||||||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 828 gcggtggatcagaagactggagcaagcagggggttcggcttcgtcaactttgttcacaga 887 Query: 274 gaggacgctgagaaggccatcagcaagctcaatgggtatggttatgataaccttatcct 332 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 888 gaggacgctgagaaggctatcagcaagctcaatggttatggttatgataaccttatcct 946
>dbj|AK060351.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-F12, full insert sequence Length = 1150 Score = 283 bits (143), Expect = 3e-73 Identities = 215/239 (89%) Strand = Plus / Plus Query: 94 gacatgaggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacc 153 ||||||||||| |||||||| |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 692 gacatgaggcgtaggaatgatgagaactctgtccgtgtgaccaatctatcagaggacacc 751 Query: 154 cgtgagcctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtc 213 ||||| || ||||| || ||||| |||||||| |||||| | || |||||||||||||| Sbjct: 752 cgtgaacccgacctacttgagctattccgcacatttggtccagttagccgtgtctacgtt 811 Query: 214 gcggtggatcagaagactggaatgagcaggggcttcggtttcgtcaactttgtccacagg 273 ||||||||||||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 812 gcggtggatcagaagactggagcaagcagggggttcggcttcgtcaactttgttcacaga 871 Query: 274 gaggacgctgagaaggccatcagcaagctcaatgggtatggttatgataaccttatcct 332 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 872 gaggacgctgagaaggctatcagcaagctcaatggttatggttatgataaccttatcct 930
>gb|AY107832.1| Zea mays PCO079325 mRNA sequence Length = 1165 Score = 246 bits (124), Expect = 7e-62 Identities = 205/232 (88%) Strand = Plus / Plus Query: 103 cgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacccgtgagcct 162 |||||||| |||||||| |||||||||||||| || || || ||||||||||| |||||| Sbjct: 680 cgcaggaacgacgagaattccgtccgtgtgaccaacctctcggaggacacccgcgagcct 739 Query: 163 gacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtcgcggtggat 222 |||||||| ||||| ||||| | ||||| ||||||||||||||||||||||||||||| Sbjct: 740 gacctccttgagctcttccgtgcctttggccctgtcagccgtgtctacgtcgcggtggat 799 Query: 223 cagaagactggaatgagcaggggcttcggtttcgtcaactttgtccacagggaggacgct 282 ||||||||||| ||||||||| || || || ||||||||||| ||||| |||||||| Sbjct: 800 cagaagactgggtcgagcagggggtttgggtttgtcaactttgttcacagagaggacgcc 859 Query: 283 gagaaggccatcagcaagctcaatgggtatggttatgataaccttatcctcc 334 ||||||||||||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 860 gagaaggccatcaacaagctcaacgggtatggttatgacaaccttatcctcc 911
>gb|BT019012.1| Zea mays clone Contig505.F mRNA sequence Length = 1140 Score = 238 bits (120), Expect = 2e-59 Identities = 204/232 (87%) Strand = Plus / Plus Query: 103 cgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacccgtgagcct 162 |||||||| |||||||| |||||||||||||| || || || ||||||||||| |||||| Sbjct: 654 cgcaggaacgacgagaattccgtccgtgtgaccaacctctcggaggacacccgcgagcct 713 Query: 163 gacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtcgcggtggat 222 |||||||| ||||| ||||| | ||||| ||||||||||||||||||||||||||||| Sbjct: 714 gacctccttgagctcttccgtgcctttggccctgtcagccgtgtctacgtcgcggtggat 773 Query: 223 cagaagactggaatgagcaggggcttcggtttcgtcaactttgtccacagggaggacgct 282 ||||||||||| ||||||||| || || || || |||||||| ||||| |||||||| Sbjct: 774 cagaagactgggtcgagcagggggtttgggtttgtgaactttgttcacagagaggacgcc 833 Query: 283 gagaaggccatcagcaagctcaatgggtatggttatgataaccttatcctcc 334 ||||||||||||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 834 gagaaggccatcaacaagctcaacgggtatggttatgacaaccttatcctcc 885
>ref|NM_111973.2| Arabidopsis thaliana EIF3G1; RNA binding / translation initiation factor AT3G11400 (EIF3G1) mRNA, complete cds Length = 1196 Score = 95.6 bits (48), Expect = 2e-16 Identities = 192/240 (80%) Strand = Plus / Plus Query: 94 gacatgaggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacc 153 ||||||||| | ||||| || |||||||| || ||||| || |||||||| ||||| ||| Sbjct: 761 gacatgaggaggaggaacgatgagaactctgtgcgtgtaaccaatctgtccgaggatacc 820 Query: 154 cgtgagcctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtc 213 ||||| |||||| | | |||||||||| | ||||||| ||||||| |||||||| || Sbjct: 821 cgtgaacctgacttgatggagctgttccacccgtttggagctgtcacacgtgtctatgtg 880 Query: 214 gcggtggatcagaagactggaatgagcaggggcttcggtttcgtcaactttgtccacagg 273 || | |||||||| |||||| ||||||| || || ||||||||||| || || ||| Sbjct: 881 gccattgatcagaaaactggagtgagcagaggatttggtttcgtcaatttcgtgagcaga 940 Query: 274 gaggacgctgagaaggccatcagcaagctcaatgggtatggttatgataaccttatcctc 333 || |||||| | | || |||| ||| | ||||| ||||||||||||||||| |||||| Sbjct: 941 gaagacgctcaaagagcaatcaacaaattgaatggttatggttatgataacctcatcctc 1000
>emb|AJ293728.1|ATH293728 Arabidopsis thaliana partial mRNA for translation initiation factor 3, subunit g (eIF3g gene) Length = 1127 Score = 95.6 bits (48), Expect = 2e-16 Identities = 192/240 (80%) Strand = Plus / Plus Query: 94 gacatgaggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacc 153 ||||||||| | ||||| || |||||||| || ||||| || |||||||| ||||| ||| Sbjct: 673 gacatgaggaggaggaacgatgagaactctgtgcgtgtaaccaatctgtccgaggatacc 732 Query: 154 cgtgagcctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtc 213 ||||| |||||| | | |||||||||| | ||||||| ||||||| |||||||| || Sbjct: 733 cgtgaacctgacttgatggagctgttccacccgtttggagctgtcacacgtgtctatgtg 792 Query: 214 gcggtggatcagaagactggaatgagcaggggcttcggtttcgtcaactttgtccacagg 273 || | |||||||| |||||| ||||||| || || ||||||||||| || || ||| Sbjct: 793 gccattgatcagaaaactggagtgagcagaggatttggtttcgtcaatttcgtgagcaga 852 Query: 274 gaggacgctgagaaggccatcagcaagctcaatgggtatggttatgataaccttatcctc 333 || |||||| | | || |||| ||| | ||||| ||||||||||||||||| |||||| Sbjct: 853 gaagacgctcaaagagcaatcaacaaattgaatggttatggttatgataacctcatcctc 912
>gb|AY133625.1| Arabidopsis thaliana AT3g11400/F24K9_7 mRNA, complete cds Length = 885 Score = 95.6 bits (48), Expect = 2e-16 Identities = 192/240 (80%) Strand = Plus / Plus Query: 94 gacatgaggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacc 153 ||||||||| | ||||| || |||||||| || ||||| || |||||||| ||||| ||| Sbjct: 613 gacatgaggaggaggaacgatgagaactctgtgcgtgtaaccaatctgtccgaggatacc 672 Query: 154 cgtgagcctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtc 213 ||||| |||||| | | |||||||||| | ||||||| ||||||| |||||||| || Sbjct: 673 cgtgaacctgacttgatggagctgttccacccgtttggagctgtcacacgtgtctatgtg 732 Query: 214 gcggtggatcagaagactggaatgagcaggggcttcggtttcgtcaactttgtccacagg 273 || | |||||||| |||||| ||||||| || || ||||||||||| || || ||| Sbjct: 733 gccattgatcagaaaactggagtgagcagaggatttggtttcgtcaatttcgtgagcaga 792 Query: 274 gaggacgctgagaaggccatcagcaagctcaatgggtatggttatgataaccttatcctc 333 || |||||| | | || |||| ||| | ||||| ||||||||||||||||| |||||| Sbjct: 793 gaagacgctcaaagagcaatcaacaaattgaatggttatggttatgataacctcatcctc 852
>gb|AY074582.1| Arabidopsis thaliana AT3g11400/F24K9_7 mRNA, complete cds Length = 1114 Score = 95.6 bits (48), Expect = 2e-16 Identities = 192/240 (80%) Strand = Plus / Plus Query: 94 gacatgaggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacc 153 ||||||||| | ||||| || |||||||| || ||||| || |||||||| ||||| ||| Sbjct: 685 gacatgaggaggaggaacgatgagaactctgtgcgtgtaaccaatctgtccgaggatacc 744 Query: 154 cgtgagcctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtc 213 ||||| |||||| | | |||||||||| | ||||||| ||||||| |||||||| || Sbjct: 745 cgtgaacctgacttgatggagctgttccacccgtttggagctgtcacacgtgtctatgtg 804 Query: 214 gcggtggatcagaagactggaatgagcaggggcttcggtttcgtcaactttgtccacagg 273 || | |||||||| |||||| ||||||| || || ||||||||||| || || ||| Sbjct: 805 gccattgatcagaaaactggagtgagcagaggatttggtttcgtcaatttcgtgagcaga 864 Query: 274 gaggacgctgagaaggccatcagcaagctcaatgggtatggttatgataaccttatcctc 333 || |||||| | | || |||| ||| | ||||| ||||||||||||||||| |||||| Sbjct: 865 gaagacgctcaaagagcaatcaacaaattgaatggttatggttatgataacctcatcctc 924
>gb|AF428308.1|AF428308 Arabidopsis thaliana AT3g11400/F24K9_7 mRNA, complete cds Length = 1124 Score = 95.6 bits (48), Expect = 2e-16 Identities = 192/240 (80%) Strand = Plus / Plus Query: 94 gacatgaggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacc 153 ||||||||| | ||||| || |||||||| || ||||| || |||||||| ||||| ||| Sbjct: 688 gacatgaggaggaggaacgatgagaactctgtgcgtgtaaccaatctgtccgaggatacc 747 Query: 154 cgtgagcctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtc 213 ||||| |||||| | | |||||||||| | ||||||| ||||||| |||||||| || Sbjct: 748 cgtgaacctgacttgatggagctgttccacccgtttggagctgtcacacgtgtctatgtg 807 Query: 214 gcggtggatcagaagactggaatgagcaggggcttcggtttcgtcaactttgtccacagg 273 || | |||||||| |||||| ||||||| || || ||||||||||| || || ||| Sbjct: 808 gccattgatcagaaaactggagtgagcagaggatttggtttcgtcaatttcgtgagcaga 867 Query: 274 gaggacgctgagaaggccatcagcaagctcaatgggtatggttatgataaccttatcctc 333 || |||||| | | || |||| ||| | ||||| ||||||||||||||||| |||||| Sbjct: 868 gaagacgctcaaagagcaatcaacaaattgaatggttatggttatgataacctcatcctc 927
>dbj|AK220979.1| Arabidopsis thaliana mRNA for eukaryotic translation initiation factor 3 subunit like protein, complete cds, clone: RAFL22-58-D06 Length = 517 Score = 95.6 bits (48), Expect = 2e-16 Identities = 192/240 (80%) Strand = Plus / Plus Query: 94 gacatgaggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacc 153 ||||||||| | ||||| || |||||||| || ||||| || |||||||| ||||| ||| Sbjct: 32 gacatgaggaggaggaacgatgagaactctgtgcgtgtaaccaatctgtccgaggatacc 91 Query: 154 cgtgagcctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtc 213 ||||| |||||| | | |||||||||| | ||||||| ||||||| |||||||| || Sbjct: 92 cgtgaacctgacttgatggagctgttccacccgtttggagctgtcacacgtgtctatgtg 151 Query: 214 gcggtggatcagaagactggaatgagcaggggcttcggtttcgtcaactttgtccacagg 273 || | |||||||| |||||| ||||||| || || ||||||||||| || || ||| Sbjct: 152 gccattgatcagaaaactggagtgagcagaggatttggtttcgtcaatttcgtgagcaga 211 Query: 274 gaggacgctgagaaggccatcagcaagctcaatgggtatggttatgataaccttatcctc 333 || |||||| | | || |||| ||| | ||||| ||||||||||||||||| |||||| Sbjct: 212 gaagacgctcaaagagcaatcaacaaattgaatggttatggttatgataacctcatcctc 271
>emb|BX824210.1|CNS0A5OW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH30ZB07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1043 Score = 95.6 bits (48), Expect = 2e-16 Identities = 192/240 (80%) Strand = Plus / Plus Query: 94 gacatgaggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacc 153 ||||||||| | ||||| || |||||||| || ||||| || |||||||| ||||| ||| Sbjct: 655 gacatgaggaggaggaacgatgagaactctgtgcgtgtaaccaatctgtccgaggatacc 714 Query: 154 cgtgagcctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtc 213 ||||| |||||| | | |||||||||| | ||||||| ||||||| |||||||| || Sbjct: 715 cgtgaacctgacttgatggagctgttccacccgtttggagctgtcacacgtgtctatgtg 774 Query: 214 gcggtggatcagaagactggaatgagcaggggcttcggtttcgtcaactttgtccacagg 273 || | |||||||| |||||| ||||||| || || ||||||||||| || || ||| Sbjct: 775 gccattgatcagaaaactggagtgagcagaggatttggtttcgtcaatttcgtgagcaga 834 Query: 274 gaggacgctgagaaggccatcagcaagctcaatgggtatggttatgataaccttatcctc 333 || |||||| | | || |||| ||| | ||||| ||||||||||||||||| |||||| Sbjct: 835 gaagacgctcaaagagcaatcaacaaattgaatggttatggttatgataacctcatcctc 894
>emb|BX822827.1|CNS0A5UP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB67ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 733 Score = 95.6 bits (48), Expect = 2e-16 Identities = 192/240 (80%) Strand = Plus / Plus Query: 94 gacatgaggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacc 153 ||||||||| | ||||| || |||||||| || ||||| || |||||||| ||||| ||| Sbjct: 298 gacatgaggaggaggaacgatgagaactctgtgcgtgtaaccaatctgtccgaggatacc 357 Query: 154 cgtgagcctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtc 213 ||||| |||||| | | |||||||||| | ||||||| ||||||| |||||||| || Sbjct: 358 cgtgaacctgacttgatggagctgttccacccgtttggagctgtcacacgtgtctatgtg 417 Query: 214 gcggtggatcagaagactggaatgagcaggggcttcggtttcgtcaactttgtccacagg 273 || | |||||||| |||||| ||||||| || || ||||||||||| || || ||| Sbjct: 418 gccattgatcagaaaactggagtgagcagaggatttggtttcgtcaatttcgtgagcaga 477 Query: 274 gaggacgctgagaaggccatcagcaagctcaatgggtatggttatgataaccttatcctc 333 || |||||| | | || |||| ||| | ||||| ||||||||||||||||| |||||| Sbjct: 478 gaagacgctcaaagagcaatcaacaaattgaatggttatggttatgataacctcatcctc 537
>gb|AC008153.5|AC008153 Arabidopsis thaliana chromosome 3 BAC F24K9 genomic sequence, complete sequence Length = 117296 Score = 95.6 bits (48), Expect = 2e-16 Identities = 192/240 (80%) Strand = Plus / Plus Query: 94 gacatgaggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacc 153 ||||||||| | ||||| || |||||||| || ||||| || |||||||| ||||| ||| Sbjct: 22629 gacatgaggaggaggaacgatgagaactctgtgcgtgtaaccaatctgtccgaggatacc 22688 Query: 154 cgtgagcctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtc 213 ||||| |||||| | | |||||||||| | ||||||| ||||||| |||||||| || Sbjct: 22689 cgtgaacctgacttgatggagctgttccacccgtttggagctgtcacacgtgtctatgtg 22748 Query: 214 gcggtggatcagaagactggaatgagcaggggcttcggtttcgtcaactttgtccacagg 273 || | |||||||| |||||| ||||||| || || ||||||||||| || || ||| Sbjct: 22749 gccattgatcagaaaactggagtgagcagaggatttggtttcgtcaatttcgtgagcaga 22808 Query: 274 gaggacgctgagaaggccatcagcaagctcaatgggtatggttatgataaccttatcctc 333 || |||||| | | || |||| ||| | ||||| ||||||||||||||||| |||||| Sbjct: 22809 gaagacgctcaaagagcaatcaacaaattgaatggttatggttatgataacctcatcctc 22868
>emb|BX823196.1|CNS0A5Y2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB9ZF05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1032 Score = 93.7 bits (47), Expect = 6e-16 Identities = 137/167 (82%) Strand = Plus / Plus Query: 94 gacatgaggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacc 153 ||||||||| | ||||| || |||||||| || ||||| || |||||||| ||||| ||| Sbjct: 648 gacatgaggaggaggaacgatgagaactctgtgcgtgtaaccaatctgtccgaggatacc 707 Query: 154 cgtgagcctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtc 213 ||||| |||||| | | |||||||||| | ||||||| ||||||| |||||||| || Sbjct: 708 cgtgaacctgacttgatggagctgttccacccgtttggagctgtcacacgtgtctatgtg 767 Query: 214 gcggtggatcagaagactggaatgagcaggggcttcggtttcgtcaa 260 || | |||||||| |||||| ||||||| || || ||||||||||| Sbjct: 768 gccattgatcagaaaactggagtgagcagaggatttggtttcgtcaa 814
>gb|BT014055.1| Lycopersicon esculentum clone 133153F, mRNA sequence Length = 1126 Score = 89.7 bits (45), Expect = 9e-15 Identities = 87/101 (86%) Strand = Plus / Plus Query: 220 gatcagaagactggaatgagcaggggcttcggtttcgtcaactttgtccacagggaggac 279 ||||| ||||| ||||||||||| || || ||||| |||||||||||| |||| || || Sbjct: 820 gatcaaaagacgggaatgagcagaggatttggttttgtcaactttgtcaacagagaagat 879 Query: 280 gctgagaaggccatcagcaagctcaatgggtatggttatga 320 ||||||| |||||| | |||||||||||| ||||||||||| Sbjct: 880 gctgagagggccataaacaagctcaatggttatggttatga 920
>emb|BX822539.1|CNS0A5TQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB47ZD10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 820 Score = 87.7 bits (44), Expect = 4e-14 Identities = 191/240 (79%) Strand = Plus / Plus Query: 94 gacatgaggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacc 153 ||||||||| | ||||| || |||||||| || ||||| || |||||||| ||||| ||| Sbjct: 387 gacatgaggaggaggaacgatgagaactctgtgcgtgtaaccaatctgtccgaggatacc 446 Query: 154 cgtgagcctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtc 213 ||||| |||||| | | |||||||||| | ||||||| ||||| | |||||||| || Sbjct: 447 cgtgaacctgacttgatggagctgttccacccgtttggagctgttacacgtgtctatgtg 506 Query: 214 gcggtggatcagaagactggaatgagcaggggcttcggtttcgtcaactttgtccacagg 273 || | |||||||| |||||| ||||||| || || ||||||||||| || || ||| Sbjct: 507 gccattgatcagaaaactggagtgagcagaggatttggtttcgtcaatttcgtgagcaga 566 Query: 274 gaggacgctgagaaggccatcagcaagctcaatgggtatggttatgataaccttatcctc 333 || |||||| | | || |||| ||| | ||||| ||||||||||||||||| |||||| Sbjct: 567 gaagacgctcaaagagcaatcaacaaattgaatggttatggttatgataacctcatcctc 626
>gb|AF291712.1|AF291712 Arabidopsis thaliana initiation factor 3g mRNA, complete cds Length = 1085 Score = 87.7 bits (44), Expect = 4e-14 Identities = 191/240 (79%) Strand = Plus / Plus Query: 94 gacatgaggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacc 153 ||||||||| | ||||| || |||||||| || ||||| || |||||||| ||||| ||| Sbjct: 655 gacatgaggaggaggaacgatgagaactctgtgcgtgtaaccaatctgtccgaggatacc 714 Query: 154 cgtgagcctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtc 213 ||||| |||||| | | |||||||||| ||||||| ||||||| |||||||| || Sbjct: 715 cgtgaacctgacttgatggagctgttccatccgtttggagctgtcacacgtgtctatgtg 774 Query: 214 gcggtggatcagaagactggaatgagcaggggcttcggtttcgtcaactttgtccacagg 273 || | |||||||| |||||| ||||||| || || ||||||||||| || || ||| Sbjct: 775 gccattgatcagaaaactggagtgagcagaggatttggtttcgtcaatttcgtgagcaga 834 Query: 274 gaggacgctgagaaggccatcagcaagctcaatgggtatggttatgataaccttatcctc 333 || |||||| | | || |||| ||| | ||||| ||||||||||||||||| |||||| Sbjct: 835 gaagacgctcaaagagcaatcaacaaattgaatggttatggttatgataacctcatcctc 894
>gb|AY087887.1| Arabidopsis thaliana clone 39231 mRNA, complete sequence Length = 1190 Score = 87.7 bits (44), Expect = 4e-14 Identities = 191/240 (79%) Strand = Plus / Plus Query: 94 gacatgaggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacc 153 ||||||||| | ||||| || |||||||| || ||||| || |||||||| ||||| ||| Sbjct: 761 gacatgaggaggaggaacgatgagaactctgtgcgtgtaaccaatctgtccgaggatacc 820 Query: 154 cgtgagcctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtc 213 ||||| |||||| | | |||||||||| ||||||| ||||||| |||||||| || Sbjct: 821 cgtgaacctgacttgatggagctgttccatccgtttggagctgtcacacgtgtctatgtg 880 Query: 214 gcggtggatcagaagactggaatgagcaggggcttcggtttcgtcaactttgtccacagg 273 || | |||||||| |||||| ||||||| || || ||||||||||| || || ||| Sbjct: 881 gccattgatcagaaaactggagtgagcagaggatttggtttcgtcaatttcgtgagcaga 940 Query: 274 gaggacgctgagaaggccatcagcaagctcaatgggtatggttatgataaccttatcctc 333 || |||||| | | || |||| ||| | ||||| ||||||||||||||||| |||||| Sbjct: 941 gaagacgctcaaagagcaatcaacaaattgaatggttatggttatgataacctcatcctc 1000
>emb|BX822392.1|CNS0A63U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB33ZD02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1084 Score = 85.7 bits (43), Expect = 1e-13 Identities = 136/167 (81%) Strand = Plus / Plus Query: 94 gacatgaggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacc 153 ||||||||| | ||||| || |||||||| || ||||| || |||||||| ||||| ||| Sbjct: 649 gacatgaggaggaggaacgatgagaactctgtgcgtgtaaccaatctgtccgaggatacc 708 Query: 154 cgtgagcctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtc 213 ||||| |||||| | | |||||||||| | ||||||| ||||||| |||||||| || Sbjct: 709 cgtgaacctgacttgatggagctgttccacccgtttggagctgtcacacgtgtctatgtg 768 Query: 214 gcggtggatcagaagactggaatgagcaggggcttcggtttcgtcaa 260 || | |||||||| |||||| | ||||| || || ||||||||||| Sbjct: 769 gccattgatcagaaaactggagttagcagaggatttggtttcgtcaa 815
>emb|BX822110.1|CNS0A60I Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB13ZD04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 624 Score = 85.7 bits (43), Expect = 1e-13 Identities = 136/167 (81%) Strand = Plus / Plus Query: 94 gacatgaggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacc 153 ||||||||| | ||||| || |||||||| || ||||| || |||||||| ||||| ||| Sbjct: 235 gacatgaggaggaggaacgatgagaactctgtgcgtgtaaccaatctgtccgaggatacc 294 Query: 154 cgtgagcctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtc 213 ||||| |||||| | | |||||||||| | ||||||| ||||| | |||||||| || Sbjct: 295 cgtgaacctgacttgatggagctgttccacccgtttggagctgttacacgtgtctatgtg 354 Query: 214 gcggtggatcagaagactggaatgagcaggggcttcggtttcgtcaa 260 || | |||||||| |||||| ||||||| || || ||||||||||| Sbjct: 355 gccattgatcagaaaactggagtgagcagaggatttggtttcgtcaa 401
>emb|BX824291.1|CNS0A5KI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH36ZH11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1003 Score = 75.8 bits (38), Expect = 1e-10 Identities = 134/166 (80%) Strand = Plus / Plus Query: 95 acatgaggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacaccc 154 |||||||| | ||||| || |||||||| || ||||| || |||||||| ||||| |||| Sbjct: 575 acatgaggaggaggaacgatgagaactctgtgcgtgtaaccaatctgtccgaggataccc 634 Query: 155 gtgagcctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtcg 214 |||| ||| || | | |||||||||| | ||||||| ||| ||| |||||||| || | Sbjct: 635 gtgaacctcacttgatggagctgttccacccgtttggcgctctcacacgtgtctatgtgg 694 Query: 215 cggtggatcagaagactggaatgagcaggggcttcggtttcgtcaa 260 | | |||||||| |||||| ||||||| || || ||||||||||| Sbjct: 695 ccattgatcagaaaactggagtgagcagaggatttggtttcgtcaa 740
>ref|XM_468181.1| Oryza sativa (japonica cultivar-group), mRNA Length = 870 Score = 71.9 bits (36), Expect = 2e-09 Identities = 183/232 (78%) Strand = Plus / Plus Query: 101 ggcgcaggaatgacgagaactccgtccgtgtgacaaatctgtcagaggacacccgtgagc 160 |||| ||||| ||||||||||| ||||| || || || ||||| ||||||||||| ||| Sbjct: 605 ggcggaggaacgacgagaactcggtccgcgtcaccaacctgtcggaggacacccgcgagg 664 Query: 161 ctgacctcctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtcgcggtgg 220 ||||||| |||||||||| ||| || || | ||| ||| | ||||||||| ||| Sbjct: 665 aagacctccgcgagctgttcggcagcttcggcccgctcacccgcgcgtacgtcgcgttgg 724 Query: 221 atcagaagactggaatgagcaggggcttcggtttcgtcaactttgtccacagggaggacg 280 |||| ||| || ||||||||| ||||| ||| ||| ||| ||| |||||||||||| Sbjct: 725 atcaccggaccggggagagcagggggttcggcttcctcagcttcgtctacagggaggacg 784 Query: 281 ctgagaaggccatcagcaagctcaatgggtatggttatgataaccttatcct 332 | |||| ||||||| ||||||||||| ||||| || |||| ||| ||||| Sbjct: 785 ccgagagggccatcgctaagctcaatggctatggctacgatagcctcatcct 836
>gb|AC137078.24| Medicago truncatula clone mth2-10e12, complete sequence Length = 144306 Score = 63.9 bits (32), Expect = 5e-07 Identities = 131/164 (79%) Strand = Plus / Plus Query: 169 ctcgagctgttccgcacgtttggtgctgtcagccgtgtctacgtcgcggtggatcagaag 228 |||||||| ||||| | |||||||||||||| | ||||| || || | ||||| ||| Sbjct: 102767 ctcgagcttttccggccttttggtgctgtcagtagggtctatgttgctattgatcaaaag 102826 Query: 229 actggaatgagcaggggcttcggtttcgtcaactttgtccacagggaggacgctgagaag 288 ||||| ||||| |||||||| || || ||||||||||| |||||| || ||| ||| | Sbjct: 102827 actggcatgagtaggggctttggctttgtcaactttgttagcagggaagatgctcagagg 102886 Query: 289 gccatcagcaagctcaatgggtatggttatgataaccttatcct 332 || |||| ||| |||||||| ||||| || ||||| || ||||| Sbjct: 102887 gctatcaacaaactcaatggatatggctacgataatctcatcct 102930
>emb|AJ310437.1|PFL310437 Platichthys flesus partial mRNA for eukaryotic translation initiation factor 3 p42 (eif3p42 gene) Length = 395 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 125 tccgtgtgacaaatctgtcagaggacacccgtgagcctgac 165 |||||||||| ||||| || ||||||||||||||| ||||| Sbjct: 139 tccgtgtgaccaatctttctgaggacacccgtgagactgac 179
>emb|CR713317.2|CNS0GDCH Tetraodon nigroviridis full-length cDNA Length = 995 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgagcctgac 165 |||||||| ||| |||| ||||||||||||||| ||||| Sbjct: 675 cgtgtgactaatttgtctgaggacacccgtgaggctgac 713
>gb|AC092631.1| Homo sapiens BAC clone RP11-326P21 from 4, complete sequence Length = 191468 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 445 ttgtgtcttgttttgccttgtt 466 |||||||||||||||||||||| Sbjct: 176064 ttgtgtcttgttttgccttgtt 176043
>ref|XM_863151.1| PREDICTED: Canis familiaris similar to Eukaryotic translation initiation factor 3 subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (eIF3g), transcript variant 8 (LOC612971), mRNA Length = 1007 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 125 tccgtgtgacaaatctgtcagaggacacccgtgagcctgac 165 ||||||| || || |||||||||||||| |||||| ||||| Sbjct: 778 tccgtgtcaccaacctgtcagaggacactcgtgagactgac 818
>ref|XM_863146.1| PREDICTED: Canis familiaris similar to Eukaryotic translation initiation factor 3 subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (eIF3g), transcript variant 7 (LOC612971), mRNA Length = 1153 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 125 tccgtgtgacaaatctgtcagaggacacccgtgagcctgac 165 ||||||| || || |||||||||||||| |||||| ||||| Sbjct: 799 tccgtgtcaccaacctgtcagaggacactcgtgagactgac 839
>ref|XM_863141.1| PREDICTED: Canis familiaris similar to Eukaryotic translation initiation factor 3 subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (eIF3g), transcript variant 6 (LOC612971), mRNA Length = 1017 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 125 tccgtgtgacaaatctgtcagaggacacccgtgagcctgac 165 ||||||| || || |||||||||||||| |||||| ||||| Sbjct: 663 tccgtgtcaccaacctgtcagaggacactcgtgagactgac 703
>ref|XM_863137.1| PREDICTED: Canis familiaris similar to Eukaryotic translation initiation factor 3 subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (eIF3g), transcript variant 5 (LOC612971), mRNA Length = 869 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 125 tccgtgtgacaaatctgtcagaggacacccgtgagcctgac 165 ||||||| || || |||||||||||||| |||||| ||||| Sbjct: 515 tccgtgtcaccaacctgtcagaggacactcgtgagactgac 555
>ref|XM_863134.1| PREDICTED: Canis familiaris similar to Eukaryotic translation initiation factor 3 subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (eIF3g), transcript variant 4 (LOC612971), mRNA Length = 786 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 125 tccgtgtgacaaatctgtcagaggacacccgtgagcctgac 165 ||||||| || || |||||||||||||| |||||| ||||| Sbjct: 432 tccgtgtcaccaacctgtcagaggacactcgtgagactgac 472
>ref|XM_849020.1| PREDICTED: Canis familiaris similar to Eukaryotic translation initiation factor 3 subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (eIF3g), transcript variant 1 (LOC612971), mRNA Length = 1126 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 125 tccgtgtgacaaatctgtcagaggacacccgtgagcctgac 165 ||||||| || || |||||||||||||| |||||| ||||| Sbjct: 772 tccgtgtcaccaacctgtcagaggacactcgtgagactgac 812
>emb|CR733959.2|CNS0GT3Q Tetraodon nigroviridis full-length cDNA Length = 989 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 674 cgtgtgactaatttgtctgaggacacccgtgag 706
>emb|CR723985.2|CNS0GLKN Tetraodon nigroviridis full-length cDNA Length = 998 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 683 cgtgtgactaatttgtctgaggacacccgtgag 715
>emb|CR718000.2|CNS0GGYE Tetraodon nigroviridis full-length cDNA Length = 895 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 697 cgtgtgactaatttgtctgaggacacccgtgag 729
>emb|CR712807.2|CNS0GCYB Tetraodon nigroviridis full-length cDNA Length = 842 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 522 cgtgtgactaatttgtctgaggacacccgtgag 554
>emb|CR712676.2|CNS0GCUO Tetraodon nigroviridis full-length cDNA Length = 873 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 675 cgtgtgactaatttgtctgaggacacccgtgag 707
>emb|CR708896.2|CNS0G9XO Tetraodon nigroviridis full-length cDNA Length = 873 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 675 cgtgtgactaatttgtctgaggacacccgtgag 707
>emb|CR706572.2|CNS0G854 Tetraodon nigroviridis full-length cDNA Length = 873 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 675 cgtgtgactaatttgtctgaggacacccgtgag 707
>emb|CR705626.2|CNS0G7EU Tetraodon nigroviridis full-length cDNA Length = 871 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 675 cgtgtgactaatttgtctgaggacacccgtgag 707
>emb|CR704405.2|CNS0G6GX Tetraodon nigroviridis full-length cDNA Length = 957 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 654 cgtgtgactaatttgtctgaggacacccgtgag 686
>emb|CR703930.2|CNS0G63Q Tetraodon nigroviridis full-length cDNA Length = 973 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 659 cgtgtgactaatttgtctgaggacacccgtgag 691
>emb|CR703241.2|CNS0G5KL Tetraodon nigroviridis full-length cDNA Length = 988 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 673 cgtgtgactaatttgtctgaggacacccgtgag 705
>emb|CR701881.2|CNS0G4IT Tetraodon nigroviridis full-length cDNA Length = 920 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 722 cgtgtgactaatttgtctgaggacacccgtgag 754
>emb|CR700852.2|CNS0G3Q8 Tetraodon nigroviridis full-length cDNA Length = 1002 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 687 cgtgtgactaatttgtctgaggacacccgtgag 719
>emb|CR698154.2|CNS0G1NA Tetraodon nigroviridis full-length cDNA Length = 1051 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 669 cgtgtgactaatttgtctgaggacacccgtgag 701
>emb|CR697832.2|CNS0G1EC Tetraodon nigroviridis full-length cDNA Length = 988 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 684 cgtgtgactaatttgtctgaggacacccgtgag 716
>emb|CR697190.2|CNS0G0WI Tetraodon nigroviridis full-length cDNA Length = 852 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 536 cgtgtgactaatttgtctgaggacacccgtgag 568
>emb|CR695248.2|CNS0FZEK Tetraodon nigroviridis full-length cDNA Length = 984 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 675 cgtgtgactaatttgtctgaggacacccgtgag 707
>emb|CR691742.2|CNS0FWP6 Tetraodon nigroviridis full-length cDNA Length = 983 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 668 cgtgtgactaatttgtctgaggacacccgtgag 700
>emb|CR691667.2|CNS0FWN3 Tetraodon nigroviridis full-length cDNA Length = 959 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 655 cgtgtgactaatttgtctgaggacacccgtgag 687
>emb|CR691364.1|CNS0FWEO Tetraodon nigroviridis full-length cDNA Length = 1340 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 1042 cgtgtgactaatttgtctgaggacacccgtgag 1074
>emb|CR686463.1|CNS0FSMJ Tetraodon nigroviridis full-length cDNA Length = 966 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 662 cgtgtgactaatttgtctgaggacacccgtgag 694
>emb|CR683660.2|CNS0FQGO Tetraodon nigroviridis full-length cDNA Length = 997 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 684 cgtgtgactaatttgtctgaggacacccgtgag 716
>emb|CR682344.2|CNS0FPG4 Tetraodon nigroviridis full-length cDNA Length = 961 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 659 cgtgtgactaatttgtctgaggacacccgtgag 691
>emb|CR681477.2|CNS0FOS1 Tetraodon nigroviridis full-length cDNA Length = 987 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 673 cgtgtgactaatttgtctgaggacacccgtgag 705
>emb|CR681101.2|CNS0FOHL Tetraodon nigroviridis full-length cDNA Length = 869 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 671 cgtgtgactaatttgtctgaggacacccgtgag 703
>emb|CR681047.2|CNS0FOG3 Tetraodon nigroviridis full-length cDNA Length = 989 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 675 cgtgtgactaatttgtctgaggacacccgtgag 707
>emb|CR679535.2|CNS0FNA3 Tetraodon nigroviridis full-length cDNA Length = 979 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 675 cgtgtgactaatttgtctgaggacacccgtgag 707
>emb|CR667936.2|CNS0FECM Tetraodon nigroviridis full-length cDNA Length = 982 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 668 cgtgtgactaatttgtctgaggacacccgtgag 700
>emb|CR665938.2|CNS0FCT4 Tetraodon nigroviridis full-length cDNA Length = 992 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 677 cgtgtgactaatttgtctgaggacacccgtgag 709
>emb|CR658901.2|CNS0F7DN Tetraodon nigroviridis full-length cDNA Length = 1007 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 691 cgtgtgactaatttgtctgaggacacccgtgag 723
>emb|CR654533.1|CNS0F40B Tetraodon nigroviridis full-length cDNA Length = 960 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 656 cgtgtgactaatttgtctgaggacacccgtgag 688
>emb|CR647894.2|CNS0EYVW Tetraodon nigroviridis full-length cDNA Length = 981 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 670 cgtgtgactaatttgtctgaggacacccgtgag 702
>emb|CR641658.2|CNS0EU2O Tetraodon nigroviridis full-length cDNA Length = 874 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 cgtgtgacaaatctgtcagaggacacccgtgag 159 |||||||| ||| |||| ||||||||||||||| Sbjct: 675 cgtgtgactaatttgtctgaggacacccgtgag 707
>emb|AL160272.16| Human DNA sequence from clone RP11-336A17 on chromosome 9 Contains the TLR4 gene for toll-like receptor 4, the 5' end of a novel gene and a CpG island, complete sequence Length = 146978 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 523 gtttatatttcatcaagtttt 543 ||||||||||||||||||||| Sbjct: 126060 gtttatatttcatcaagtttt 126040
>emb|CR753873.6| Zebrafish DNA sequence from clone DKEY-145O23 in linkage group 5, complete sequence Length = 173372 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 270 cagggaggacgctgagaaggccatc 294 |||||||||||||| |||||||||| Sbjct: 166198 cagggaggacgctgcgaaggccatc 166174
>gb|AC108518.3| Homo sapiens BAC clone RP11-699F8 from 4, complete sequence Length = 120612 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 tactgcctactaagcattcag 388 ||||||||||||||||||||| Sbjct: 34327 tactgcctactaagcattcag 34307
>gb|AC021216.6| Homo sapiens BAC clone RP11-497K18 from 4, complete sequence Length = 84902 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 tactgcctactaagcattcag 388 ||||||||||||||||||||| Sbjct: 14033 tactgcctactaagcattcag 14013
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 411 gctctccgcattatcagttcttttt 435 |||||| |||||||||||||||||| Sbjct: 1120416 gctctctgcattatcagttcttttt 1120440
>gb|AC134919.3| Homo sapiens BAC clone RP13-485B10 from 4, complete sequence Length = 145992 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 tactgcctactaagcattcag 388 ||||||||||||||||||||| Sbjct: 4658 tactgcctactaagcattcag 4638
>ref|NM_120682.2| Arabidopsis thaliana EIF3G2; RNA binding / translation initiation factor AT5G06000 (EIF3G2) mRNA, complete cds Length = 1037 Score = 40.1 bits (20), Expect = 7.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 110 atgacgagaactccgtccgtgtgacaaatctgtcagaggacacccgtg 157 |||| |||||||| ||||||||||| ||| |||| || || ||||||| Sbjct: 607 atgatgagaactctgtccgtgtgactaatttgtctgaagatacccgtg 654
>gb|AC167173.4| Mus musculus BAC clone RP23-30D21 from chromosome 3, complete sequence Length = 203513 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 365 agttactgcctactaagcattcagatat 392 |||||||| |||||||||||||| |||| Sbjct: 37626 agttactggctactaagcattcaaatat 37653
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 atgtggagatggctgcacct 354 |||||||||||||||||||| Sbjct: 3375627 atgtggagatggctgcacct 3375608
>ref|XM_324155.1| Neurospora crassa OR74A hypothetical protein (NCU04799.1) partial mRNA Length = 2295 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ggcttcggtttcgtcaactt 263 |||||||||||||||||||| Sbjct: 844 ggcttcggtttcgtcaactt 863
>ref|XM_955332.1| Neurospora crassa OR74A hypothetical protein (NCU04799.1) partial mRNA Length = 2295 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ggcttcggtttcgtcaactt 263 |||||||||||||||||||| Sbjct: 844 ggcttcggtttcgtcaactt 863
>ref|XM_656512.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4000.2), mRNA Length = 2136 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ggcttcggtttcgtcaactt 263 |||||||||||||||||||| Sbjct: 790 ggcttcggtttcgtcaactt 809
>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome Length = 1827111 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 atttcatcaagttttgtaga 548 |||||||||||||||||||| Sbjct: 888905 atttcatcaagttttgtaga 888886
>gb|AC004925.1| Homo sapiens PAC clone RP5-907C10 from 7, complete sequence Length = 154959 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 tatatttcatcaagttttgt 545 |||||||||||||||||||| Sbjct: 28340 tatatttcatcaagttttgt 28359
>ref|XM_745074.1| Aspergillus fumigatus Af293 polyadenylate-binding protein (Afu1g04190) partial mRNA Length = 2262 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 231 tggaatgagcaggggcttcggtttcgtc 258 ||||| ||||| |||||||||||||||| Sbjct: 1257 tggaaagagcaagggcttcggtttcgtc 1284
>emb|CR376778.9| Zebrafish DNA sequence from clone DKEYP-94F12 in linkage group 25, complete sequence Length = 185814 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 agggaggacgctgagaaggccatc 294 ||||||||||||| |||||||||| Sbjct: 57458 agggaggacgctgcgaaggccatc 57435
>emb|BX510935.28| Zebrafish DNA sequence from clone DKEY-207L24 in linkage group 14, complete sequence Length = 128666 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 agggaggacgctgagaaggccatc 294 ||||||||||||| |||||||||| Sbjct: 51862 agggaggacgctgcgaaggccatc 51839
>gb|AC139292.4| Mus musculus BAC clone RP24-279K6 from chromosome 3, complete sequence Length = 165051 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 365 agttactgcctactaagcattcagatat 392 |||||||| |||||||||||||| |||| Sbjct: 70769 agttactggctactaagcattcaaatat 70742
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 aaggccatcagcaagctcaa 305 |||||||||||||||||||| Sbjct: 1187996 aaggccatcagcaagctcaa 1188015
>gb|AC161369.3| Mus musculus BAC clone RP23-426C11 from chromosome 3, complete sequence Length = 202655 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 365 agttactgcctactaagcattcagatat 392 |||||||| |||||||||||||| |||| Sbjct: 170347 agttactggctactaagcattcaaatat 170374
>emb|BX510311.6| Zebrafish DNA sequence from clone CH211-235F16, complete sequence Length = 198245 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 agggaggacgctgagaaggccatc 294 ||||||||||||| |||||||||| Sbjct: 194305 agggaggacgctgcgaaggccatc 194328
>gb|AY072407.1| Arabidopsis thaliana eukaryotic translation initiation factor 3 subunit-like protein (At5g06000) mRNA, complete cds Length = 940 Score = 40.1 bits (20), Expect = 7.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 110 atgacgagaactccgtccgtgtgacaaatctgtcagaggacacccgtg 157 |||| |||||||| ||||||||||| ||| |||| || || ||||||| Sbjct: 606 atgatgagaactctgtccgtgtgactaatttgtctgaagatacccgtg 653
>emb|BX511020.10| Zebrafish DNA sequence from clone RP71-9C18, complete sequence Length = 160830 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 agggaggacgctgagaaggccatc 294 ||||||||||||| |||||||||| Sbjct: 142137 agggaggacgctgcgaaggccatc 142114
>gb|AC091656.3| Rattus norvegicus strain Brown Norway clone RP31-236J24, complete sequence Length = 132420 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 gtccacagggaggacgctga 284 |||||||||||||||||||| Sbjct: 53702 gtccacagggaggacgctga 53721
>emb|BX088547.12| Zebrafish DNA sequence from clone DKEY-238O14, complete sequence Length = 256446 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 agggaggacgctgagaaggccatc 294 ||||||||||||| |||||||||| Sbjct: 7560 agggaggacgctgcgaaggccatc 7583
>dbj|AB017060.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K18J17 Length = 54252 Score = 40.1 bits (20), Expect = 7.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 110 atgacgagaactccgtccgtgtgacaaatctgtcagaggacacccgtg 157 |||| |||||||| ||||||||||| ||| |||| || || ||||||| Sbjct: 42311 atgatgagaactctgtccgtgtgactaatttgtctgaagatacccgtg 42358
>gb|AC147869.3| Monodelphis domestica clone VMRC6-113K21, complete sequence Length = 157763 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 gacttgagtttatatttcat 535 |||||||||||||||||||| Sbjct: 61047 gacttgagtttatatttcat 61066
>gb|BT002127.1| Arabidopsis thaliana eukaryotic translation initiation factor 3 subunit-like protein (At5g06000) mRNA, complete cds Length = 855 Score = 40.1 bits (20), Expect = 7.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 110 atgacgagaactccgtccgtgtgacaaatctgtcagaggacacccgtg 157 |||| |||||||| ||||||||||| ||| |||| || || ||||||| Sbjct: 512 atgatgagaactctgtccgtgtgactaatttgtctgaagatacccgtg 559
>emb|AL713996.11| Zebrafish DNA sequence from clone BUSM1-201C3 in linkage group 9, complete sequence Length = 58037 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 agggaggacgctgagaaggccatc 294 ||||||||||||| |||||||||| Sbjct: 22878 agggaggacgctgcgaaggccatc 22901
>dbj|AP001696.1| Homo sapiens genomic DNA, chromosome 21q, section 40/105 Length = 340000 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 aggactggacttgagtttat 528 |||||||||||||||||||| Sbjct: 109474 aggactggacttgagtttat 109493
>emb|CR555293.8| Zebrafish DNA sequence from clone DKEY-23P14 in linkage group 11, complete sequence Length = 220631 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 agggaggacgctgagaaggccatc 294 ||||||||||||| |||||||||| Sbjct: 51000 agggaggacgctgcgaaggccatc 50977
>emb|BX005356.7| Zebrafish DNA sequence from clone CH211-255I20 in linkage group 14, complete sequence Length = 171108 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 agggaggacgctgagaaggccatc 294 ||||||||||||||| |||||||| Sbjct: 169241 agggaggacgctgaggaggccatc 169218
>gb|U70731.1|ENU70731 Emericella nidulans putative poly(A)-binding protein (fabM) gene, complete cds Length = 3076 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ggcttcggtttcgtcaactt 263 |||||||||||||||||||| Sbjct: 1424 ggcttcggtttcgtcaactt 1443
>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold Length = 1833844 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 gacttgagtttatatttcat 535 |||||||||||||||||||| Sbjct: 1489611 gacttgagtttatatttcat 1489630
>dbj|AP001596.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1466C5, APP-D21S292 region, complete sequence Length = 151079 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 aggactggacttgagtttat 528 |||||||||||||||||||| Sbjct: 10659 aggactggacttgagtttat 10678 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,255,721 Number of Sequences: 3902068 Number of extensions: 4255721 Number of successful extensions: 79672 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79437 Number of HSP's gapped (non-prelim): 233 length of query: 577 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 554 effective length of database: 17,143,297,704 effective search space: 9497386928016 effective search space used: 9497386928016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
