ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd27o14 |
|---|---|
| Clone Library Name | barley_pub |
>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase| (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3259 Score = 37.0 bits (84), Expect = 0.037 Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 8/83 (9%) Frame = -1 Query: 297 EPRTDILRPEQSLSVLHQPPPSRWMSQLPDPSPEPLCRWYPGG---VPSKHTAPFSCA-- 133 +P +D LRP +L PPPS+ + LP PSP R PG P+ T+P C Sbjct: 291 QPASDALRPRPAL-----PPPSK-SALLPPPSPRVGKRALPGSSAQPPATPTSPHRCTQE 344 Query: 132 ---PTRRLTSTGSTGAAPDSIGP 73 P T+ G P S GP Sbjct: 345 PSLPEDITTTEEKRGKKPKSSGP 367
>Y215_ADE02 (P03291) Hypothetical protein F-215| Length = 215 Score = 34.7 bits (78), Expect = 0.18 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = -1 Query: 279 LRPEQSLSVLHQPPPSRWMSQLPDPSPEPLCRWYPGGVPS 160 +RP S HQP P +S P P P+P R P G P+ Sbjct: 176 MRPLASHRRRHQPAPGNQVSPGPSPRPDPAMRGKPAGAPA 215
>TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36)| Length = 3164 Score = 34.7 bits (78), Expect = 0.18 Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 3/76 (3%) Frame = -1 Query: 282 ILRPEQSLSVLHQPPPSRWMSQLPDPSPEPLCRWYPGGVPSKHTAPFSCAPT---RRLTS 112 +L P+ Q P+ + P P P R GVP++ T P P RRL S Sbjct: 2593 LLAPDPLSPTADQSVPTSQCAPRP-PGPAVTAREARPGVPAESTRPAPVGPRDDFRRLPS 2651 Query: 111 TGSTGAAPDSIGPRRP 64 S+ A PD+ PR P Sbjct: 2652 PQSSPAPPDATAPRPP 2667
>CYTSA_FUGRU (Q2KN94) Cytospin-A| Length = 1118 Score = 32.3 bits (72), Expect = 0.90 Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 2/80 (2%) Frame = -1 Query: 297 EPRTDILRPEQSLSVLHQPPPSRWMSQLPDPSPEPLCRWYPGGVPSKHTAPFSCAPTRRL 118 EP + +S Q PPS S P S PL R P K + +P +R Sbjct: 825 EPSPTVKTLIKSFDSASQGPPSNGASVTPTVSAAPLPRTPLSPSPMKTPPAAAVSPIQRH 884 Query: 117 TSTGSTGAAP--DSIGPRRP 64 + +GS AA S+G +RP Sbjct: 885 SISGSMSAAKPLSSLGDKRP 904
>CYTSA_TETNG (Q2KN95) Cytospin-A| Length = 1113 Score = 32.3 bits (72), Expect = 0.90 Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 2/80 (2%) Frame = -1 Query: 297 EPRTDILRPEQSLSVLHQPPPSRWMSQLPDPSPEPLCRWYPGGVPSKHTAPFSCAPTRRL 118 EP + +S Q PPS S P S PL R P K + +P +R Sbjct: 820 EPSPTVKTLIKSFDSASQGPPSSGASVTPTASAAPLPRTPLSPSPMKTPPAAAVSPIQRH 879 Query: 117 TSTGSTGAAP--DSIGPRRP 64 + +GS AA S+G +RP Sbjct: 880 SVSGSMSAAKPLSSLGDKRP 899
>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)| Length = 268 Score = 31.6 bits (70), Expect = 1.5 Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 6/73 (8%) Frame = -1 Query: 273 PEQSLSVLHQP------PPSRWMSQLPDPSPEPLCRWYPGGVPSKHTAPFSCAPTRRLTS 112 P S + H P PPS S P PSP P R P P K +P S +P+ L+ Sbjct: 145 PRSSTPIPHPPRRSLPSPPSPSPSPSPSPSPSPSPRSTPIPHPRKR-SPASPSPSPSLSK 203 Query: 111 TGSTGAAPDSIGP 73 + S +P S+ P Sbjct: 204 SPSPSESP-SLAP 215
>ANLN_DROME (Q9V4P1) Actin-binding protein anillin (Actin-binding protein 8)| (ABP8) Length = 1239 Score = 30.8 bits (68), Expect = 2.6 Identities = 19/57 (33%), Positives = 26/57 (45%) Frame = -1 Query: 243 PPPSRWMSQLPDPSPEPLCRWYPGGVPSKHTAPFSCAPTRRLTSTGSTGAAPDSIGP 73 P PSR + +P P P P+ PG SK +P APT S + + D + P Sbjct: 511 PAPSRVVRPMPPPPPPPIAALSPGLASSKRRSP-GDAPTTDEDSKRARKSHSDRLYP 566
>BLTR_BACSU (P39842) Multidrug-efflux transporter 2 regulator| Length = 273 Score = 30.8 bits (68), Expect = 2.6 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +2 Query: 335 GIFDSDEIYNPDFYNWNKVYVRYCDGA 415 GIF ++I DFYN++ Y++ DGA Sbjct: 174 GIFAREQILEKDFYNYSYFYIKVKDGA 200
>PTPRZ_RAT (Q62656) Receptor-type tyrosine-protein phosphatase zeta precursor| (EC 3.1.3.48) (R-PTP-zeta) (Phosphacan) (3F8 chondroitin sulfate proteoglycan) (3H1 keratan sulfate proteoglycan) Length = 2316 Score = 30.8 bits (68), Expect = 2.6 Identities = 16/38 (42%), Positives = 20/38 (52%) Frame = -1 Query: 285 DILRPEQSLSVLHQPPPSRWMSQLPDPSPEPLCRWYPG 172 D+LRPE + + L PS L DPS E W+PG Sbjct: 628 DVLRPESTRNALEDSAPSGSEESLKDPSLEGSV-WFPG 664
>VEGFB_BOVIN (Q9XS49) Vascular endothelial growth factor B precursor (VEGF-B)| (VEGF-related factor) (VRF) Length = 207 Score = 30.8 bits (68), Expect = 2.6 Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 3/74 (4%) Frame = -1 Query: 291 RTDILRPEQSLSVLHQPPPSR---WMSQLPDPSPEPLCRWYPGGVPSKHTAPFSCAPTRR 121 R ++P+++ + H+P P W PSP + P PS H AP + + Sbjct: 129 RESAVKPDRASTPHHRPQPRSVPGWDPAPGAPSPADITHPTPAPGPSAHAAPSAASALTP 188 Query: 120 LTSTGSTGAAPDSI 79 +T + AA S+ Sbjct: 189 GPATAAADAAASSV 202
>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-2) Length = 1558 Score = 30.8 bits (68), Expect = 2.6 Identities = 21/64 (32%), Positives = 28/64 (43%) Frame = -1 Query: 279 LRPEQSLSVLHQPPPSRWMSQLPDPSPEPLCRWYPGGVPSKHTAPFSCAPTRRLTSTGST 100 L QSL P+ + Q+P SP P + PGG P P SC PT + S+ Sbjct: 999 LTQSQSLPPPAASHPTTGLHQVPSQSPFPQHPFVPGGPPP--ITPPSCPPTSTPPAGPSS 1056 Query: 99 GAAP 88 + P Sbjct: 1057 SSQP 1060
>WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 501 Score = 30.4 bits (67), Expect = 3.4 Identities = 21/60 (35%), Positives = 26/60 (43%) Frame = -1 Query: 243 PPPSRWMSQLPDPSPEPLCRWYPGGVPSKHTAPFSCAPTRRLTSTGSTGAAPDSIGPRRP 64 PPPSR +P P P + P +PS +AP P L+ GST P P P Sbjct: 322 PPPSRPGVVVPPPPPNRMYPPPPPALPS--SAPSGPPPPPPLSMAGSTAPPPPPPPPPPP 379
>ZN358_HUMAN (Q9NW07) Zinc finger protein 358| Length = 481 Score = 30.4 bits (67), Expect = 3.4 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = -1 Query: 237 PSRWMSQLPDPSPEPLCRWYPGGVPSKHTAPFSCAPTRRLTSTG-STGAAPD 85 PS + +P P P+P+ P P+ + P C+PTR S TG +P+ Sbjct: 421 PSPDLDPVPSPDPDPV----PSPDPNPVSCPDPCSPTRGTVSPALPTGESPE 468
>FOXGB_MOUSE (Q60987) Forkhead box protein G1B (Forkhead-related protein FKHL1)| (Transcription factor BF-1) (Brain factor 1) (BF1) Length = 481 Score = 30.4 bits (67), Expect = 3.4 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Frame = -1 Query: 243 PPPSRWMSQLPDPSPE-PLCRWYPGGVPSKHTAPFSCAPTRRLTSTGSTGAAPDSIGPR 70 PPP + Q P P+P+ P R P K P P ST GA D++G + Sbjct: 66 PPPPQQQQQQPPPAPQPPQARGAPAADDDKGPQPLLLPP-----STALDGAKADALGAK 119
>SRBP2_CRIGR (Q60429) Sterol regulatory element-binding protein 2 (SREBP-2)| (Sterol regulatory element-binding transcription factor 2) Length = 1139 Score = 30.0 bits (66), Expect = 4.5 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = -1 Query: 234 SRWMSQLPDPSPEPLCRWYPGGVPSKHTAPFSCAPTRRLTSTGSTGAAPD 85 S + + PD E LC +PGG S ++ + + + S G+ GAA D Sbjct: 36 SNQVGEFPDLFSEQLCSSFPGGGSSGSSSSSNSSSSSGSNSRGNGGAATD 85
>DDEF1_BOVIN (O97902) 130-kDa phosphatidylinositol 4,5-biphosphate-dependent ARF1| GTPase-activating protein (PIP2-dependent ARF1 GAP) (ADP-ribosylation factor-directed GTPase-activating protein 1) (ARF GTPase-activating protein 1) (Development and differe Length = 1129 Score = 30.0 bits (66), Expect = 4.5 Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 11/69 (15%) Frame = -1 Query: 243 PPPSRWMSQLPDPSPEPLCRWYPGGVPSKHTAPF--------SCAPTRR---LTSTGSTG 97 PPP L DP P PL P G P+K P+ S T + L+ STG Sbjct: 832 PPPPGHKRTLSDP-PSPL----PHGPPNKGAVPWGNDVGPSSSSKTTNKFEGLSQQSSTG 886 Query: 96 AAPDSIGPR 70 +A ++GPR Sbjct: 887 SAKTALGPR 895
>CN032_MACFA (Q4R837) Protein C14orf32 homolog| Length = 245 Score = 30.0 bits (66), Expect = 4.5 Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 5/64 (7%) Frame = -1 Query: 240 PPSRWMSQLP--DPSPEPLCRWYPGGVP---SKHTAPFSCAPTRRLTSTGSTGAAPDSIG 76 PP W P +PS P P G+P + T PF APT S TG P Sbjct: 30 PPQGWPGSSPWNNPSAPPSV---PSGLPPSATPSTVPFGPAPTGMYPSVPPTGPPPGPPA 86 Query: 75 PRRP 64 P P Sbjct: 87 PFPP 90
>IF2_BORPE (Q7VYR2) Translation initiation factor IF-2| Length = 997 Score = 30.0 bits (66), Expect = 4.5 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Frame = -1 Query: 276 RPEQSLSVLHQPPPSRWMSQLPDPSPEPLCRWYPGGVPSKHTA-PFSCAPTRRLTSTGST 100 +PEQ QP P+ P+P PEP P P++ A P A +T T + Sbjct: 164 QPEQPAQAEAQPEPTPAAQAEPEPQPEP----QPEAAPAQAVAEPVEPAKNVSVTETEAE 219 Query: 99 GAAPDSI 79 A P+ + Sbjct: 220 QARPEPV 226
>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich| (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) Length = 699 Score = 30.0 bits (66), Expect = 4.5 Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 6/73 (8%) Frame = -1 Query: 273 PEQSLSVLHQPPPSRWMSQLPDPSPE---PLCRWYPGGVPSKHTAP---FSCAPTRRLTS 112 P Q QPPP + Q P P P+ P+ PG P +AP S P T+ Sbjct: 76 PPQQPPPHQQPPPHQPPHQQPPPPPQESKPVVPQGPGSAPGVSSAPPPAVSAPPANPPTT 135 Query: 111 TGSTGAAPDSIGP 73 G P P Sbjct: 136 GAPPGPGPTPTPP 148
>IF2_BORPA (Q7W9A5) Translation initiation factor IF-2| Length = 969 Score = 30.0 bits (66), Expect = 4.5 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Frame = -1 Query: 276 RPEQSLSVLHQPPPSRWMSQLPDPSPEPLCRWYPGGVPSKHTA-PFSCAPTRRLTSTGST 100 +PEQ QP P+ P+P PEP P P++ A P A +T T + Sbjct: 136 QPEQPAQAEAQPEPTPAAQAEPEPQPEP----QPEAAPAQAVAEPVEPAKNVSVTETEAE 191 Query: 99 GAAPDSI 79 A P+ + Sbjct: 192 QARPEPV 198
>NFIA_HUMAN (Q12857) Nuclear factor 1 A-type (Nuclear factor 1/A) (NF1-A)| (NFI-A) (NF-I/A) (CCAAT-box-binding transcription factor) (CTF) (TGGCA-binding protein) Length = 509 Score = 29.6 bits (65), Expect = 5.9 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 7/58 (12%) Frame = -1 Query: 216 LPDPSPEPLCRWYPGGV-----PSKHTAPFSCAPTRRLTSTGSTGAAPD--SIGPRRP 64 LP P P P+ R P V P+ T + +PT ST ST A S+GPR P Sbjct: 437 LPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPTYSTPSTSPANRFVSVGPRDP 494
>VEGFB_HUMAN (P49765) Vascular endothelial growth factor B precursor (VEGF-B)| (VEGF-related factor) (VRF) Length = 207 Score = 29.6 bits (65), Expect = 5.9 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Frame = -1 Query: 279 LRPEQSLSVLHQPPPSR---WMSQLPDPSPEPLCRWYPGGVPSKHTAPFSCAPTRRLTST 109 ++P+++ + H+P P W S PSP + P PS H AP T + Sbjct: 133 VKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAP----STTSALTP 188 Query: 108 GSTGAAPDS 82 G AA D+ Sbjct: 189 GPAAAAADA 197
>RNH3_LISMO (Q8Y7P5) Ribonuclease HIII (EC 3.1.26.4) (RNase HIII)| Length = 308 Score = 29.3 bits (64), Expect = 7.7 Identities = 18/59 (30%), Positives = 25/59 (42%) Frame = +2 Query: 233 EGGGWCSTLKDCSGRRMSVLGSSNFMKPLQFAGHGIFDSDEIYNPDFYNWNKVYVRYCD 409 E W +TL + + SV S + P FA + SDE+ DF+ V Y D Sbjct: 61 EAKKWVATLPESKAKAPSV---SKGILPANFASKNVIGSDEVGTGDFFGPITVCAAYVD 116
>SF01_HUMAN (Q15637) Splicing factor 1 (Zinc finger protein 162) (Transcription| factor ZFM1) (Zinc finger gene in MEN1 locus) (Mammalian branch point-binding protein mBBP) (BBP) Length = 639 Score = 29.3 bits (64), Expect = 7.7 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 7/64 (10%) Frame = -1 Query: 243 PPPSRWMSQLPDPSPEPLCRWY-------PGGVPSKHTAPFSCAPTRRLTSTGSTGAAPD 85 PPP Q P P PL W P PS A + P ++ T+T +T A Sbjct: 480 PPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTG 539 Query: 84 SIGP 73 SI P Sbjct: 540 SIPP 543
>NFIA_CHICK (P17923) Nuclear factor 1 A-type (Nuclear factor 1/A) (NF1-A)| (NFI-A) (NF-I/A) (CCAAT-box-binding transcription factor) (CTF) (TGGCA-binding protein) Length = 522 Score = 29.3 bits (64), Expect = 7.7 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 7/58 (12%) Frame = -1 Query: 216 LPDPSPEPLCRWYPGGV-----PSKHTAPFSCAPTRRLTSTGSTGAAPD--SIGPRRP 64 LP P P P+ R P V P+ T + +PT ST ST A S+GPR P Sbjct: 450 LPPPPPPPMARPVPLPVPDTKPPTTSTEGGATSPTSPTYSTPSTSPANRFVSVGPRDP 507
>SF01_MOUSE (Q64213) Splicing factor 1 (Zinc finger protein 162) (Transcription| factor ZFM1) (mZFM) (Zinc finger gene in MEN1 locus) (Mammalian branch point-binding protein mBBP) (BBP) (CW17) Length = 653 Score = 29.3 bits (64), Expect = 7.7 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 7/64 (10%) Frame = -1 Query: 243 PPPSRWMSQLPDPSPEPLCRWY-------PGGVPSKHTAPFSCAPTRRLTSTGSTGAAPD 85 PPP Q P P PL W P PS A + P ++ T+T +T A Sbjct: 480 PPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTG 539 Query: 84 SIGP 73 SI P Sbjct: 540 SIPP 543
>SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich| (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) (100-kDa DNA-pairing protein) (hPOMp Length = 707 Score = 29.3 bits (64), Expect = 7.7 Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 8/67 (11%) Frame = -1 Query: 249 HQPPPSRWMSQLPDPSP------EPLCRWYPGGVPSKHTAP--FSCAPTRRLTSTGSTGA 94 HQPPP Q P P +P+ PG P +AP S AP +T T Sbjct: 85 HQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAP----PATPPTSG 140 Query: 93 APDSIGP 73 AP GP Sbjct: 141 APPGSGP 147
>RNH3_LISMF (Q720K1) Ribonuclease HIII (EC 3.1.26.4) (RNase HIII)| Length = 308 Score = 28.9 bits (63), Expect = 10.0 Identities = 18/60 (30%), Positives = 26/60 (43%) Frame = +2 Query: 230 LEGGGWCSTLKDCSGRRMSVLGSSNFMKPLQFAGHGIFDSDEIYNPDFYNWNKVYVRYCD 409 +E W +TL + + SV S + P FA + SDE+ DF+ V Y D Sbjct: 60 VEAKKWVATLPESKTKAPSV---SKGILPANFASKNVIGSDEVGTGDFFGPITVCAAYVD 116
>RNH3_LISIN (Q92CI0) Ribonuclease HIII (EC 3.1.26.4) (RNase HIII)| Length = 308 Score = 28.9 bits (63), Expect = 10.0 Identities = 18/59 (30%), Positives = 25/59 (42%) Frame = +2 Query: 233 EGGGWCSTLKDCSGRRMSVLGSSNFMKPLQFAGHGIFDSDEIYNPDFYNWNKVYVRYCD 409 E W +TL + + SV S + P FA + SDE+ DF+ V Y D Sbjct: 61 EAKKWVATLPEAKTKAPSV---SKGVLPANFAAKNVIGSDEVGTGDFFGPITVCAAYVD 116
>PAXI_RAT (Q66H76) Paxillin| Length = 586 Score = 28.9 bits (63), Expect = 10.0 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Frame = -1 Query: 243 PPPSRWMSQLPDPSPEPLCRWYPGGVPSKHTAPFSCAPTRRLTSTGSTGAAP-DSIG 76 PPPS L +PL +W P G H P S +P ++ S+ + P DS+G Sbjct: 51 PPPSS--EALNGTVLDPLDQWQPSGSRYAHQQPPSPSPIYSSSTKNSSASNPQDSVG 105
>IF2_AZOSE (Q5NZS1) Translation initiation factor IF-2| Length = 945 Score = 28.9 bits (63), Expect = 10.0 Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 7/89 (7%) Frame = -1 Query: 369 SGLYISSLSKIP*PANCSGFMKFDEPRTDILR-PEQSLSVLHQPPPSRWMSQLPDPSPEP 193 +GL + + P P N + P + +R PE + +P P P+P PEP Sbjct: 118 AGLPMGEIEPTPEPENIVEPVAEAIPEPEPVREPEPEPEPIVEPEPEPEPEPEPEPQPEP 177 Query: 192 LCRWYP------GGVPSKHTAPFSCAPTR 124 R P G P+K AP AP+R Sbjct: 178 EPRPEPEPATVESGAPAKPEAPVR-APSR 205
>Y493_MYCBO (P64704) Hypothetical protein Mb0493| Length = 451 Score = 28.9 bits (63), Expect = 10.0 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = -1 Query: 309 MKFDEPRTDILRPEQSLSVLHQPPPSRWMSQLPDPSPEPLCRWYP 175 ++FD P +D E++L+V PP + LPD + W P Sbjct: 178 IQFDSPISDKAAVERALTVTTDPPVEGGWAWLPDEAQGARVHWRP 222
>Y483_MYCTU (P64703) Hypothetical protein Rv0483/MT0501| Length = 451 Score = 28.9 bits (63), Expect = 10.0 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = -1 Query: 309 MKFDEPRTDILRPEQSLSVLHQPPPSRWMSQLPDPSPEPLCRWYP 175 ++FD P +D E++L+V PP + LPD + W P Sbjct: 178 IQFDSPISDKAAVERALTVTTDPPVEGGWAWLPDEAQGARVHWRP 222
>YAT4_RHOBL (P05447) ATP synthase subunits region ORF 4| Length = 255 Score = 28.9 bits (63), Expect = 10.0 Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 14/82 (17%) Frame = -1 Query: 273 PEQSLSVLHQPPPSRWMSQLPDPSPEPLCR---WYPGGVPSKHTAPFSCAPTR------- 124 PE+SL+VLH PP + E L R W GGV + APTR Sbjct: 170 PERSLTVLHAPPSQTPFWLRTADAWEKLGRRLPWLSGGVLMVEASKQVYAPTRGGLGAVV 229 Query: 123 ----RLTSTGSTGAAPDSIGPR 70 R+ GAA ++ PR Sbjct: 230 KKPLRVLEGIGQGAAKPALNPR 251
>TIG_MESFL (Q6F159) Trigger factor (TF)| Length = 426 Score = 28.9 bits (63), Expect = 10.0 Identities = 12/36 (33%), Positives = 17/36 (47%) Frame = +2 Query: 206 GSGSWLIHLEGGGWCSTLKDCSGRRMSVLGSSNFMK 313 G G W + ++G W TLK R ++ L F K Sbjct: 12 GQGKWTVTIDGTEWTETLKKAKNRVLANLEVPGFRK 47
>MRP2_ARATH (Q42093) Multidrug resistance-associated protein 2 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 2) (ATP-energized glutathione S-conjugate pump 2) Length = 1623 Score = 28.9 bits (63), Expect = 10.0 Identities = 18/65 (27%), Positives = 26/65 (40%) Frame = -1 Query: 273 PEQSLSVLHQPPPSRWMSQLPDPSPEPLCRWYPGGVPSKHTAPFSCAPTRRLTSTGSTGA 94 PE + + PP W S + + R+ P P H F PT ++ G TGA Sbjct: 1221 PEAPPVIENNRPPPGWPSSGSIKFEDVVLRYRPQLPPVLHGVSFFIHPTDKVGIVGRTGA 1280 Query: 93 APDSI 79 S+ Sbjct: 1281 GKSSL 1285
>RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-1-related protein) Length = 1559 Score = 28.9 bits (63), Expect = 10.0 Identities = 17/51 (33%), Positives = 24/51 (47%) Frame = -1 Query: 240 PPSRWMSQLPDPSPEPLCRWYPGGVPSKHTAPFSCAPTRRLTSTGSTGAAP 88 P + + Q+P SP P + PGG P P SC PT + S+ + P Sbjct: 1012 PTTGGLHQVPSQSPFPQHPFVPGGPPP--ITPPSCPPTSTPPAGPSSSSQP 1060
>KELC_ANOST (Q70JS2) Ring canal kelch homolog (Kelch-like protein 1) [Contains:| Kelch short protein] Length = 1499 Score = 28.9 bits (63), Expect = 10.0 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +2 Query: 371 FYNWNKVYVRYCDGASFAGDAEGQAQ 448 F ++N ++ R CDG S AG + GQ Q Sbjct: 1205 FIDFNFMFSRNCDGCSSAGGSHGQQQ 1230
>MMP19_HUMAN (Q99542) Matrix metalloproteinase-19 precursor (EC 3.4.24.-)| (MMP-19) (Matrix metalloproteinase RASI) (MMP-18) Length = 508 Score = 28.9 bits (63), Expect = 10.0 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Frame = +2 Query: 311 KPLQFAGHGIFDSDEIYNPDFYNWNKVYVRYCDGASFAGDAEGQAQDGTTVYFRGLRIYE 490 K F G G + DE+ DF ++ K G A QDG +F+G ++Y Sbjct: 391 KVFLFKGSGYWQWDELARTDFSSYPKPIKGLFTGVPNQPSAAMSWQDGRVYFFKG-KVYW 449 Query: 491 AITDEL-MQKG 520 + +L ++KG Sbjct: 450 RLNQQLRVEKG 460
>IL2RB_RAT (P26896) Interleukin-2 receptor beta chain precursor (IL-2| receptor) (P70-75) (High affinity IL-2 receptor beta subunit) (CD122 antigen) Length = 537 Score = 28.9 bits (63), Expect = 10.0 Identities = 15/46 (32%), Positives = 20/46 (43%) Frame = -1 Query: 267 QSLSVLHQPPPSRWMSQLPDPSPEPLCRWYPGGVPSKHTAPFSCAP 130 ++L H P PS + SQL L +W VP +P AP Sbjct: 277 KTLLKCHIPDPSEFFSQLSSQHGGDLQKWLSSPVPQSFFSPTGSAP 322
>GCNL2_HUMAN (Q92830) General control of amino acid synthesis protein 5-like 2| (EC 2.3.1.48) (Histone acetyltransferase GCN5) (hsGCN5) (STAF97) Length = 837 Score = 28.9 bits (63), Expect = 10.0 Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 4/65 (6%) Frame = -1 Query: 246 QPPPSRWMSQLPDPSPEPLCRWYPGGVPSKHTAPFSCAPTRRLTSTGSTGAAPDSIG--- 76 QP P + + P P+P P P P+ AP A T TG G G Sbjct: 15 QPRPLQSPAPAPTPTPAPSPASAPIPTPTPAPAPAPAAAPAGSTGTGGPGVGSGGAGSGG 74 Query: 75 -PRRP 64 P RP Sbjct: 75 DPARP 79 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,116,103 Number of Sequences: 219361 Number of extensions: 1963854 Number of successful extensions: 7104 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 6423 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7027 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
