ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd27o01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X00408.1|CHHV01 Hordeum vulgare chloroplast genes for ATPase subunits B and E, transfer RNA2-Met and transfer RNA1-Val Length = 3819 Score = 672 bits (339), Expect = 0.0 Identities = 356/364 (97%) Strand = Plus / Plus Query: 61 cagaatattctgtctcatagttctgaaatagagttctttatttttatttttatagtatta 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3194 cagaatattctgtctcatagttctgaaatagagttctttatttttatttttatagtatta 3253 Query: 121 cttctcattatactgcatagattagtcctactatcttaattaggttctaattattctaat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3254 cttctcattatactgcatagattagtcctactatcttaattaggttctaattattctaat 3313 Query: 181 tagtagtattctcatttttatttaatagtctcttattattattaaatagtaaataaagga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3314 tagtagtattctcatttttatttaatagtctcttattattattaaatagtaaataaagga 3373 Query: 241 tagagctattcnnnnnnnatagagattctagagaaagcgagacaaagtgaaacgataaag 300 ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 3374 tagagctattctttttttatagagattctagagaaagcgagacaaagtgaaacgataaag 3433 Query: 301 ttttctttatataagaattagatctacatacaccatatctaaatagaatggaaatccaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3434 ttttctttatataagaattagatctacatacaccatatctaaatagaatggaaatccaaa 3493 Query: 361 agaaagggagttgggattccattggatgaatctttaaagaagatgcagcacagaggaaac 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 3494 agaaagggagttgggattccattggatgaagctttaaagaagatgcagcacagaggaaac 3553 Query: 421 aaag 424 |||| Sbjct: 3554 aaag 3557
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 519 bits (262), Expect = e-144 Identities = 345/373 (92%), Gaps = 19/373 (5%) Strand = Plus / Minus Query: 61 cagaatattctgtctcatagttctgaaatagagttctttatttttatttttatagtatta 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 50748 cagaatattctgtctcatagttctgaaatagagttctttatttttatttt-atagtatta 50690 Query: 121 cttctcatta----tactgcatagattagtcctactatcttaattaggttctaattattc 176 |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 50689 cttctcattaattctactgcatagattagtcctactatcttaattaggttctaatt---- 50634 Query: 177 taattagtagtattctcatttttatttaatagtctcttattatt-----attaaatagta 231 |||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 50633 ----tagtagtattctcatttttatttaatagtctcttattattttattattaaatatta 50578 Query: 232 aataaaggatagagctattcnnnnnnnatagagattctagagaaagcgagacaaagtgaa 291 |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 50577 aataaaggatagagctattcttttttc-tagagattctagagaaagcgagacaaagtgaa 50519 Query: 292 acgataaagttttctttatataagaattagatctacatacaccatatctaaatagaatgg 351 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50518 acgagaaagttttctttatataagaattagatctacatacaccatatctaaatagaatgg 50459 Query: 352 aaatccaaaagaaagggagttgggattccattggatgaatctttaaagaagatgcagcac 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50458 aaatccaaaagaaagggagttgggattccattggatgaatctttaaagaagatgcagcac 50399 Query: 412 agaggaaacaaag 424 ||||||||||||| Sbjct: 50398 agaggaaacaaag 50386
>gb|J04954.1|WHTCPPSBG Triticum aestivum chloroplast NADPH-plastoquinone oxireductase (psbG) and thylakoid membrane protein (ndhC) genes, complete cds Length = 1492 Score = 208 bits (105), Expect = 1e-50 Identities = 105/105 (100%) Strand = Plus / Plus Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 60 Query: 380 cattggatgaatctttaaagaagatgcagcacagaggaaacaaag 424 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cattggatgaatctttaaagaagatgcagcacagaggaaacaaag 105
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 151 bits (76), Expect = 2e-33 Identities = 143/165 (86%), Gaps = 4/165 (2%) Strand = Plus / Minus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 49903 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 49844 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 | ||| || ||||| |||||||||| ||||||| |||||||||||||| ||||||| Sbjct: 49843 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggagtcgggattc 49788 Query: 380 cattggatgaatctttaaagaagatgcagcacagaggaaacaaag 424 |||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 49787 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaag 49743 Score = 75.8 bits (38), Expect = 1e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 ||||||||||||||||||| ||||||||||| |||||| ||||||| ||||||| Sbjct: 50019 gttctgaaatagagttctt------tatttttatagaattactcctcattaggctgcata 49966 Query: 140 gattagtcctactatcttaattaggttctaatt 172 ||||||| | |||||||||||||| ||||||| Sbjct: 49965 cattagtcatcctatcttaattaggctctaatt 49933
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 151 bits (76), Expect = 2e-33 Identities = 143/165 (86%), Gaps = 4/165 (2%) Strand = Plus / Minus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 48157 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 48098 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 | ||| || ||||| |||||||||| ||||||| |||||||||||||| ||||||| Sbjct: 48097 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggagtcgggattc 48042 Query: 380 cattggatgaatctttaaagaagatgcagcacagaggaaacaaag 424 |||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 48041 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaag 47997 Score = 75.8 bits (38), Expect = 1e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 48273 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 48220 Query: 140 gattagtcctactatcttaattaggttctaatt 172 ||||||| | |||||||||||||| ||||||| Sbjct: 48219 cattagtcatcctatcttaattaggctctaatt 48187
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 151 bits (76), Expect = 2e-33 Identities = 143/165 (86%), Gaps = 4/165 (2%) Strand = Plus / Minus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 123090 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 123031 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 | ||| || ||||| |||||||||| ||||||| |||||||||||||| ||||||| Sbjct: 123030 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggagtcgggattc 122975 Query: 380 cattggatgaatctttaaagaagatgcagcacagaggaaacaaag 424 |||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 122974 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaag 122930 Score = 75.8 bits (38), Expect = 1e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 |||||||||||||||||| |||||||||||| |||||| ||||||| ||||||| Sbjct: 123206 gttctgaaatagagttct------ttatttttatagaattactcctcattaggctgcata 123153 Query: 140 gattagtcctactatcttaattaggttctaatt 172 ||||||| | |||||||||||||| ||||||| Sbjct: 123152 cattagtcatcctatcttaattaggctctaatt 123120
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 151 bits (76), Expect = 2e-33 Identities = 143/165 (86%), Gaps = 4/165 (2%) Strand = Plus / Minus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 5608993 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 5608934 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 | ||| || ||||| |||||||||| ||||||| |||||||||||||| ||||||| Sbjct: 5608933 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggagtcgggattc 5608878 Query: 380 cattggatgaatctttaaagaagatgcagcacagaggaaacaaag 424 |||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 5608877 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaag 5608833 Score = 135 bits (68), Expect = 1e-28 Identities = 141/165 (85%), Gaps = 4/165 (2%) Strand = Plus / Minus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 ||||||||||||||||| ||||||| ||||| ||| | |||||| ||| |||||||||| Sbjct: 11286117 tagagattctagagaaaatgagacaacgtgaagcgagagagttttgtttctataagaatt 11286058 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 | ||| || ||||| |||||||||| |||||| |||||||||||||| ||||||| Sbjct: 11286057 atgtctcca----ccatacctaaatagaaaggaaataaaaaagaaagggagtcgggattc 11286002 Query: 380 cattggatgaatctttaaagaagatgcagcacagaggaaacaaag 424 |||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 11286001 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaag 11285957 Score = 75.8 bits (38), Expect = 1e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 11286233 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 11286180 Query: 140 gattagtcctactatcttaattaggttctaatt 172 ||||||| | |||||||||||||| ||||||| Sbjct: 11286179 cattagtcatcctatcttaattaggctctaatt 11286147 Score = 75.8 bits (38), Expect = 1e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 5609109 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 5609056 Query: 140 gattagtcctactatcttaattaggttctaatt 172 ||||||| | |||||||||||||| ||||||| Sbjct: 5609055 cattagtcatcctatcttaattaggctctaatt 5609023
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 151 bits (76), Expect = 2e-33 Identities = 143/165 (86%), Gaps = 4/165 (2%) Strand = Plus / Minus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 10341765 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 10341706 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 | ||| || ||||| |||||||||| ||||||| |||||||||||||| ||||||| Sbjct: 10341705 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggagtcgggattc 10341650 Query: 380 cattggatgaatctttaaagaagatgcagcacagaggaaacaaag 424 |||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 10341649 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaag 10341605 Score = 143 bits (72), Expect = 5e-31 Identities = 142/165 (86%), Gaps = 4/165 (2%) Strand = Plus / Plus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 19944647 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 19944706 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 | ||| || ||||| |||||||||| ||||||| ||||||||||| || ||||||| Sbjct: 19944707 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggggtcgggattc 19944762 Query: 380 cattggatgaatctttaaagaagatgcagcacagaggaaacaaag 424 |||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 19944763 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaag 19944807 Score = 75.8 bits (38), Expect = 1e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Plus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 19944531 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 19944584 Query: 140 gattagtcctactatcttaattaggttctaatt 172 ||||||| | |||||||||||||| ||||||| Sbjct: 19944585 cattagtcatcctatcttaattaggctctaatt 19944617 Score = 75.8 bits (38), Expect = 1e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 10341881 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 10341828 Query: 140 gattagtcctactatcttaattaggttctaatt 172 ||||||| | |||||||||||||| ||||||| Sbjct: 10341827 cattagtcatcctatcttaattaggctctaatt 10341795
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 151 bits (76), Expect = 2e-33 Identities = 143/165 (86%), Gaps = 4/165 (2%) Strand = Plus / Minus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 10347804 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 10347745 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 | ||| || ||||| |||||||||| ||||||| |||||||||||||| ||||||| Sbjct: 10347744 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggagtcgggattc 10347689 Query: 380 cattggatgaatctttaaagaagatgcagcacagaggaaacaaag 424 |||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 10347688 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaag 10347644 Score = 143 bits (72), Expect = 5e-31 Identities = 142/165 (86%), Gaps = 4/165 (2%) Strand = Plus / Plus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 19955923 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 19955982 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 | ||| || ||||| |||||||||| ||||||| ||||||||||| || ||||||| Sbjct: 19955983 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggggtcgggattc 19956038 Query: 380 cattggatgaatctttaaagaagatgcagcacagaggaaacaaag 424 |||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 19956039 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaag 19956083 Score = 75.8 bits (38), Expect = 1e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Plus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 19955807 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 19955860 Query: 140 gattagtcctactatcttaattaggttctaatt 172 ||||||| | |||||||||||||| ||||||| Sbjct: 19955861 cattagtcatcctatcttaattaggctctaatt 19955893 Score = 75.8 bits (38), Expect = 1e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 |||||||||||||||||||| |||||||||| |||||| ||||||| ||||||| Sbjct: 10347920 gttctgaaatagagttcttt------atttttatagaattactcctcattaggctgcata 10347867 Query: 140 gattagtcctactatcttaattaggttctaatt 172 ||||||| | |||||||||||||| ||||||| Sbjct: 10347866 cattagtcatcctatcttaattaggctctaatt 10347834
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 151 bits (76), Expect = 2e-33 Identities = 143/165 (86%), Gaps = 4/165 (2%) Strand = Plus / Minus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 5608982 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 5608923 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 | ||| || ||||| |||||||||| ||||||| |||||||||||||| ||||||| Sbjct: 5608922 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggagtcgggattc 5608867 Query: 380 cattggatgaatctttaaagaagatgcagcacagaggaaacaaag 424 |||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 5608866 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaag 5608822 Score = 135 bits (68), Expect = 1e-28 Identities = 141/165 (85%), Gaps = 4/165 (2%) Strand = Plus / Minus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 ||||||||||||||||| ||||||| ||||| ||| | |||||| ||| |||||||||| Sbjct: 11285788 tagagattctagagaaaatgagacaacgtgaagcgagagagttttgtttctataagaatt 11285729 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 | ||| || ||||| |||||||||| |||||| |||||||||||||| ||||||| Sbjct: 11285728 atgtctcca----ccatacctaaatagaaaggaaataaaaaagaaagggagtcgggattc 11285673 Query: 380 cattggatgaatctttaaagaagatgcagcacagaggaaacaaag 424 |||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 11285672 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaag 11285628 Score = 75.8 bits (38), Expect = 1e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 |||||||||||||||||||| |||||||||| |||||| ||||||| ||||||| Sbjct: 11285904 gttctgaaatagagttcttt------atttttatagaattactcctcattaggctgcata 11285851 Query: 140 gattagtcctactatcttaattaggttctaatt 172 ||||||| | |||||||||||||| ||||||| Sbjct: 11285850 cattagtcatcctatcttaattaggctctaatt 11285818 Score = 75.8 bits (38), Expect = 1e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 |||||||||||||||||| |||||||||||| |||||| ||||||| ||||||| Sbjct: 5609098 gttctgaaatagagttct------ttatttttatagaattactcctcattaggctgcata 5609045 Query: 140 gattagtcctactatcttaattaggttctaatt 172 ||||||| | |||||||||||||| ||||||| Sbjct: 5609044 cattagtcatcctatcttaattaggctctaatt 5609012
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 151 bits (76), Expect = 2e-33 Identities = 143/165 (86%), Gaps = 4/165 (2%) Strand = Plus / Plus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 43892 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 43951 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 | ||| || ||||| |||||||||| ||||||| |||||||||||||| ||||||| Sbjct: 43952 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggagtcgggattc 44007 Query: 380 cattggatgaatctttaaagaagatgcagcacagaggaaacaaag 424 |||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 44008 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaag 44052 Score = 75.8 bits (38), Expect = 1e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Plus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 43776 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 43829 Query: 140 gattagtcctactatcttaattaggttctaatt 172 ||||||| | |||||||||||||| ||||||| Sbjct: 43830 cattagtcatcctatcttaattaggctctaatt 43862
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 143 bits (72), Expect = 5e-31 Identities = 142/165 (86%), Gaps = 4/165 (2%) Strand = Plus / Minus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 49955 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 49896 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 | ||| || ||||| |||||||||| ||||||| ||||||||||| || ||||||| Sbjct: 49895 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggggtcgggattc 49840 Query: 380 cattggatgaatctttaaagaagatgcagcacagaggaaacaaag 424 |||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 49839 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaag 49795 Score = 75.8 bits (38), Expect = 1e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 ||||||||||||||||||| ||||||||||| |||||| ||||||| ||||||| Sbjct: 50071 gttctgaaatagagttctt------tatttttatagaattactcctcattaggctgcata 50018 Query: 140 gattagtcctactatcttaattaggttctaatt 172 ||||||| | |||||||||||||| ||||||| Sbjct: 50017 cattagtcatcctatcttaattaggctctaatt 49985
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 143 bits (72), Expect = 5e-31 Identities = 142/165 (86%), Gaps = 4/165 (2%) Strand = Plus / Minus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 49955 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 49896 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 | ||| || ||||| |||||||||| ||||||| ||||||||||| || ||||||| Sbjct: 49895 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggggtcgggattc 49840 Query: 380 cattggatgaatctttaaagaagatgcagcacagaggaaacaaag 424 |||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 49839 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaag 49795 Score = 75.8 bits (38), Expect = 1e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 ||||||||||||||||||| ||||||||||| |||||| ||||||| ||||||| Sbjct: 50071 gttctgaaatagagttctt------tatttttatagaattactcctcattaggctgcata 50018 Query: 140 gattagtcctactatcttaattaggttctaatt 172 ||||||| | |||||||||||||| ||||||| Sbjct: 50017 cattagtcatcctatcttaattaggctctaatt 49985
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 143 bits (72), Expect = 5e-31 Identities = 142/165 (86%), Gaps = 4/165 (2%) Strand = Plus / Minus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 49961 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 49902 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 | ||| || ||||| |||||||||| ||||||| ||||||||||| || ||||||| Sbjct: 49901 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggggtcgggattc 49846 Query: 380 cattggatgaatctttaaagaagatgcagcacagaggaaacaaag 424 |||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 49845 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaag 49801 Score = 75.8 bits (38), Expect = 1e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 50077 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 50024 Query: 140 gattagtcctactatcttaattaggttctaatt 172 ||||||| | |||||||||||||| ||||||| Sbjct: 50023 cattagtcatcctatcttaattaggctctaatt 49991
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23, complete sequence Length = 130273 Score = 143 bits (72), Expect = 5e-31 Identities = 142/165 (86%), Gaps = 4/165 (2%) Strand = Plus / Minus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 78221 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 78162 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 | ||| || ||||| |||||||||| ||||||| |||||||||||||| ||||||| Sbjct: 78161 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggagtcgggattc 78106 Query: 380 cattggatgaatctttaaagaagatgcagcacagaggaaacaaag 424 ||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 78105 tattggatgaatctttaaagaagacgtggcaaagaggaaacaaag 78061 Score = 67.9 bits (34), Expect = 3e-08 Identities = 78/93 (83%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 78337 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 78284 Query: 140 gattagtcctactatcttaattaggttctaatt 172 |||| || | |||||||||||||| ||||||| Sbjct: 78283 cattactcatcctatcttaattaggctctaatt 78251
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 143 bits (72), Expect = 5e-31 Identities = 142/165 (86%), Gaps = 4/165 (2%) Strand = Plus / Minus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 23635540 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 23635481 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 | ||| || ||||| |||||||||| ||||||| |||||||||||||| ||||||| Sbjct: 23635480 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggagtcgggattc 23635425 Query: 380 cattggatgaatctttaaagaagatgcagcacagaggaaacaaag 424 ||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 23635424 tattggatgaatctttaaagaagacgtggcaaagaggaaacaaag 23635380 Score = 67.9 bits (34), Expect = 3e-08 Identities = 78/93 (83%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 |||||||||||||||||||| |||||||||| |||||| ||||||| ||||||| Sbjct: 23635656 gttctgaaatagagttcttt------atttttatagaattactcctcattaggctgcata 23635603 Query: 140 gattagtcctactatcttaattaggttctaatt 172 |||| || | |||||||||||||| ||||||| Sbjct: 23635602 cattactcatcctatcttaattaggctctaatt 23635570
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 143 bits (72), Expect = 5e-31 Identities = 142/165 (86%), Gaps = 4/165 (2%) Strand = Plus / Plus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 12588823 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 12588882 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 | ||| || ||||| |||||||||| ||||||| |||||||||||||| |||||| Sbjct: 12588883 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggagtcaggattc 12588938 Query: 380 cattggatgaatctttaaagaagatgcagcacagaggaaacaaag 424 |||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 12588939 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaag 12588983 Score = 75.8 bits (38), Expect = 1e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Plus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 23209025 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 23209078 Query: 140 gattagtcctactatcttaattaggttctaatt 172 ||||||| | |||||||||||||| ||||||| Sbjct: 23209079 cattagtcatcctatcttaattaggctctaatt 23209111 Score = 75.8 bits (38), Expect = 1e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Plus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 12588707 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 12588760 Query: 140 gattagtcctactatcttaattaggttctaatt 172 ||||||| | |||||||||||||| ||||||| Sbjct: 12588761 cattagtcatcctatcttaattaggctctaatt 12588793 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 260 tagagattctagagaaagcgagacaaagtgaa 291 ||||||||||||||||| ||||||||||||| Sbjct: 23209141 tagagattctagagaaaatgagacaaagtgaa 23209172
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 143 bits (72), Expect = 5e-31 Identities = 142/165 (86%), Gaps = 4/165 (2%) Strand = Plus / Minus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 41396 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 41337 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 | ||| || ||||| |||||||||| ||||||| ||||||||||| || ||||||| Sbjct: 41336 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggggtcgggattc 41281 Query: 380 cattggatgaatctttaaagaagatgcagcacagaggaaacaaag 424 |||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 41280 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaag 41236 Score = 75.8 bits (38), Expect = 1e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 |||||||||||||||||||| |||||||||| |||||| ||||||| ||||||| Sbjct: 41512 gttctgaaatagagttcttt------atttttatagaattactcctcattaggctgcata 41459 Query: 140 gattagtcctactatcttaattaggttctaatt 172 ||||||| | |||||||||||||| ||||||| Sbjct: 41458 cattagtcatcctatcttaattaggctctaatt 41426
>dbj|AP004757.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652D10 Length = 156744 Score = 143 bits (72), Expect = 5e-31 Identities = 142/165 (86%), Gaps = 4/165 (2%) Strand = Plus / Plus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 71136 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 71195 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 | ||| || ||||| |||||||||| ||||||| |||||||||||||| |||||| Sbjct: 71196 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggagtcaggattc 71251 Query: 380 cattggatgaatctttaaagaagatgcagcacagaggaaacaaag 424 |||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 71252 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaag 71296 Score = 75.8 bits (38), Expect = 1e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Plus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 71020 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 71073 Query: 140 gattagtcctactatcttaattaggttctaatt 172 ||||||| | |||||||||||||| ||||||| Sbjct: 71074 cattagtcatcctatcttaattaggctctaatt 71106
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 143 bits (72), Expect = 5e-31 Identities = 142/165 (86%), Gaps = 4/165 (2%) Strand = Plus / Minus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 49882 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 49823 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 | ||| || ||||| |||||||||| | ||||| |||||||||||||| ||||||| Sbjct: 49822 atgtctcca----ccatacctaaatagaaagtaaatcaaaaagaaagggagtcgggattc 49767 Query: 380 cattggatgaatctttaaagaagatgcagcacagaggaaacaaag 424 |||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 49766 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaag 49722 Score = 75.8 bits (38), Expect = 1e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 |||||||||||||||||| |||||||||||| |||||| ||||||| ||||||| Sbjct: 49998 gttctgaaatagagttct------ttatttttatagaattactcctcattaggctgcata 49945 Query: 140 gattagtcctactatcttaattaggttctaatt 172 ||||||| | |||||||||||||| ||||||| Sbjct: 49944 cattagtcatcctatcttaattaggctctaatt 49912
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 135 bits (68), Expect = 1e-28 Identities = 141/165 (85%), Gaps = 4/165 (2%) Strand = Plus / Plus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 ||||||||||||||||| ||||||| ||||| ||| | |||||| ||| |||||||||| Sbjct: 85937 tagagattctagagaaaatgagacaacgtgaagcgagagagttttgtttctataagaatt 85996 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 | ||| || ||||| |||||||||| |||||| |||||||||||||| ||||||| Sbjct: 85997 atgtctcca----ccatacctaaatagaaaggaaataaaaaagaaagggagtcgggattc 86052 Query: 380 cattggatgaatctttaaagaagatgcagcacagaggaaacaaag 424 |||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 86053 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaag 86097 Score = 75.8 bits (38), Expect = 1e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Plus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 85821 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 85874 Query: 140 gattagtcctactatcttaattaggttctaatt 172 ||||||| | |||||||||||||| ||||||| Sbjct: 85875 cattagtcatcctatcttaattaggctctaatt 85907
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 133 bits (67), Expect = 5e-28 Identities = 125/144 (86%), Gaps = 4/144 (2%) Strand = Plus / Minus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 |||||||||||||||||| ||||||||||||| ||| | |||||||||| |||||||||| Sbjct: 52525 tagagattctagagaaagtgagacaaagtgaagcgaaagagttttctttgtataagaatt 52466 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 || |||| || ||||||||||||||| ||||||| ||||||| || ||| |||||| Sbjct: 52465 aggtctatat----catatctaaatagaagggaaatcaaaaagaagggaagtggggatta 52410 Query: 380 cattggatgaatctttaaagaaga 403 ||||||||||||| |||| ||||| Sbjct: 52409 cattggatgaatccttaaggaaga 52386 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 65 atattctgtctcatagttctgaaatagagttctttatttt 104 ||||||||| ||||| ||||||||||||||||||| |||| Sbjct: 52727 atattctgtttcataattctgaaatagagttctttttttt 52688 Score = 48.1 bits (24), Expect = 0.023 Identities = 39/44 (88%) Strand = Plus / Minus Query: 185 agtattctcatttttatttaatagtctcttattattattaaata 228 |||||| || ||||||||||||||||||| | ||| |||||||| Sbjct: 52592 agtattttcttttttatttaatagtctctgactatcattaaata 52549
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 133 bits (67), Expect = 5e-28 Identities = 125/144 (86%), Gaps = 4/144 (2%) Strand = Plus / Minus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 |||||||||||||||||| ||||||||||||| ||| | |||||||||| |||||||||| Sbjct: 52514 tagagattctagagaaagtgagacaaagtgaagcgaaagagttttctttgtataagaatt 52455 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 || |||| || ||||||||||||||| ||||||| ||||||| || ||| |||||| Sbjct: 52454 aggtctatat----catatctaaatagaagggaaatcaaaaagaagggaagtggggatta 52399 Query: 380 cattggatgaatctttaaagaaga 403 ||||||||||||| |||| ||||| Sbjct: 52398 cattggatgaatccttaaggaaga 52375 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 65 atattctgtctcatagttctgaaatagagttctttatttt 104 ||||||||| ||||| ||||||||||||||||||| |||| Sbjct: 52716 atattctgtttcataattctgaaatagagttctttttttt 52677 Score = 48.1 bits (24), Expect = 0.023 Identities = 39/44 (88%) Strand = Plus / Minus Query: 185 agtattctcatttttatttaatagtctcttattattattaaata 228 |||||| || ||||||||||||||||||| | ||| |||||||| Sbjct: 52581 agtattttcttttttatttaatagtctctgactatcattaaata 52538
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 125 bits (63), Expect = 1e-25 Identities = 124/144 (86%), Gaps = 4/144 (2%) Strand = Plus / Minus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 |||||||||||||||||| ||||||||||||| ||| | |||||||||| |||||||||| Sbjct: 114679 tagagattctagagaaagtgagacaaagtgaagcgaaagagttttctttgtataagaatt 114620 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 || |||| || ||||||||||||||| ||||||| ||||||| | ||| |||||| Sbjct: 114619 aggtctatat----catatctaaatagaagggaaatcaaaaagaaggcaagtggggatta 114564 Query: 380 cattggatgaatctttaaagaaga 403 ||||||||||||| |||| ||||| Sbjct: 114563 cattggatgaatccttaaggaaga 114540 Score = 42.1 bits (21), Expect = 1.4 Identities = 89/111 (80%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 107 tttttatagtattacttctcattatactgcatagattagtcctactatcttaattaggtt 166 ||||| |||||||||| ||||||| || ||| |||| || | | || ||||||||||| Sbjct: 114824 tttttttagtattactcctcattaggatgtatatattaatcatccgattttaattaggtt 114765 Query: 167 ctaattattctaattagt----agtattctcatttttatttaatagtctct 213 |||| |||||||||| |||||| || ||||||||||||||||||| Sbjct: 114764 ctaa----tctaattagtagtaagtattttcttttttatttaatagtctct 114718
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 125 bits (63), Expect = 1e-25 Identities = 124/144 (86%), Gaps = 4/144 (2%) Strand = Plus / Minus Query: 260 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 319 |||||||||||||||||| ||||||||||||| ||| | |||||||||| |||||||||| Sbjct: 53052 tagagattctagagaaagtgagacaaagtgaagcgaaagagttttctttgtataagaatt 52993 Query: 320 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 379 || |||| || ||||||||||||||| ||||||| ||||||| | ||| |||||| Sbjct: 52992 aggtctatat----catatctaaatagaagggaaatcaaaaagaaggcaagtggggatta 52937 Query: 380 cattggatgaatctttaaagaaga 403 ||||||||||||| |||| ||||| Sbjct: 52936 cattggatgaatccttaaggaaga 52913 Score = 42.1 bits (21), Expect = 1.4 Identities = 89/111 (80%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 107 tttttatagtattacttctcattatactgcatagattagtcctactatcttaattaggtt 166 ||||| |||||||||| ||||||| || ||| |||| || | | || ||||||||||| Sbjct: 53197 tttttttagtattactcctcattaggatgtatatattaatcatccgattttaattaggtt 53138 Query: 167 ctaattattctaattagt----agtattctcatttttatttaatagtctct 213 |||| |||||||||| |||||| || ||||||||||||||||||| Sbjct: 53137 ctaa----tctaattagtagtaagtattttcttttttatttaatagtctct 53091
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 75.8 bits (38), Expect = 1e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Plus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 159673 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 159726 Query: 140 gattagtcctactatcttaattaggttctaatt 172 ||||||| | |||||||||||||| ||||||| Sbjct: 159727 cattagtcatcctatcttaattaggctctaatt 159759 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 260 tagagattctagagaaagcgagacaaagtgaa 291 ||||||||||||||||| ||||||||||||| Sbjct: 159789 tagagattctagagaaaatgagacaaagtgaa 159820
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 75.8 bits (38), Expect = 1e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Plus Query: 80 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 139 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 43787 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 43840 Query: 140 gattagtcctactatcttaattaggttctaatt 172 ||||||| | |||||||||||||| ||||||| Sbjct: 43841 cattagtcatcctatcttaattaggctctaatt 43873 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 260 tagagattctagagaaagcgagacaaagtgaa 291 ||||||||||||||||| ||||||||||||| Sbjct: 43903 tagagattctagagaaaatgagacaaagtgaa 43934
>emb|CR628334.9| Zebrafish DNA sequence from clone CH211-175F11 in linkage group 17, complete sequence Length = 147890 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 152 tatcttaattaggttctaattattctaattagtagta 188 |||||||||||||| ||||||| ||| |||||||||| Sbjct: 136939 tatcttaattaggtactaattactcttattagtagta 136903
>gb|AC140211.2| Mus musculus BAC clone RP24-474M1 from chromosome 14, complete sequence Length = 159577 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttatagta 117 |||||||||||||||||||||||| Sbjct: 41279 ttctttatttttatttttatagta 41256
>gb|AC131100.3| Mus musculus BAC clone RP23-43H7 from chromosome 14, complete sequence Length = 200247 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttatagta 117 |||||||||||||||||||||||| Sbjct: 157189 ttctttatttttatttttatagta 157166
>emb|AL163279.2|HS21C079 Homo sapiens chromosome 21 segment HS21C079 Length = 340000 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 97 tttatttttatttttatagtatta 120 |||||||||||||||||||||||| Sbjct: 179704 tttatttttatttttatagtatta 179681
>gb|AF064861.5| Homo sapiens chromosome 21 clone RP1-128M19 map q22.2, complete sequence Length = 135578 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 97 tttatttttatttttatagtatta 120 |||||||||||||||||||||||| Sbjct: 61901 tttatttttatttttatagtatta 61878
>gb|AC131888.1| Homo sapiens chromosome 16 clone RP11-626G3, complete sequence Length = 162957 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 90 agagttctttatttttatttttat 113 |||||||||||||||||||||||| Sbjct: 101728 agagttctttatttttatttttat 101751
>gb|AC157524.2| Pan troglodytes BAC clone CH251-516K17 from chromosome unknown, complete sequence Length = 204622 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 97 tttatttttatttttatagtatta 120 |||||||||||||||||||||||| Sbjct: 96114 tttatttttatttttatagtatta 96137
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 260 tagagattctagagaaagcgagacaaagtgaa 291 ||||||||||||||||| ||||||||||||| Sbjct: 8142769 tagagattctagagaaaatgagacaaagtgaa 8142738 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ttaattaggttctaattatt 175 |||||||||||||||||||| Sbjct: 8142826 ttaattaggttctaattatt 8142807
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0503B05 Length = 156814 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 260 tagagattctagagaaagcgagacaaagtgaa 291 ||||||||||||||||| ||||||||||||| Sbjct: 130962 tagagattctagagaaaatgagacaaagtgaa 130931 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ttaattaggttctaattatt 175 |||||||||||||||||||| Sbjct: 131019 ttaattaggttctaattatt 131000
>dbj|BS000156.1| Pan troglodytes chromosome 22 clone:RP43-145H09, map 22, complete sequences Length = 152714 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 97 tttatttttatttttatagtatta 120 |||||||||||||||||||||||| Sbjct: 65037 tttatttttatttttatagtatta 65014
>emb|AL954225.2|PTB448G23 Pan troglodytes chromosome 22 BAC PTB-448G23, complete sequence Length = 173384 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 97 tttatttttatttttatagtatta 120 |||||||||||||||||||||||| Sbjct: 31792 tttatttttatttttatagtatta 31769
>gb|AC005995.3| Homo sapiens PAC clone RP1-42M2 from 7, complete sequence Length = 80010 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 97 tttatttttatttttatagtatt 119 ||||||||||||||||||||||| Sbjct: 34924 tttatttttatttttatagtatt 34946
>emb|BX897684.8| Zebrafish DNA sequence from clone CH211-107A4 in linkage group 7, complete sequence Length = 147920 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 166 tctaattattctaattagtagtattct 192 ||||||||||||||||| ||||||||| Sbjct: 115750 tctaattattctaattactagtattct 115724
>gb|AC104806.3| Homo sapiens BAC clone RP11-584P21 from 4, complete sequence Length = 147777 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 94 ttctttatttttatttttatagtatta 120 ||||||||||||||||||||| ||||| Sbjct: 144807 ttctttatttttatttttatattatta 144781
>gb|AC131206.2| Homo sapiens 12 BAC RP11-157G21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 177260 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 97 tttatttttatttttatagtattactt 123 |||||||||||||| |||||||||||| Sbjct: 20889 tttatttttattttaatagtattactt 20915
>emb|BX119982.8| Zebrafish DNA sequence from clone CH211-214J4 in linkage group 23, complete sequence Length = 210702 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 89 tagagttctttatttttatttttatag 115 ||||||| ||||||||||||||||||| Sbjct: 190328 tagagttttttatttttatttttatag 190354
>emb|AL645926.16| Zebrafish DNA sequence from clone RP71-1G24, complete sequence Length = 141213 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 284 aaagtgaaacgataaagttttct 306 ||||||||||||||||||||||| Sbjct: 10955 aaagtgaaacgataaagttttct 10933
>gb|AY853472.1| Marsupenaeus japonicus isolate ZJ27 control region, partial sequence; mitochondrial Length = 504 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 tattattattaaatagtaaata 235 |||||||||||||||||||||| Sbjct: 26 tattattattaaatagtaaata 47
>gb|AY853469.1| Marsupenaeus japonicus isolate TW11 control region, partial sequence; mitochondrial Length = 504 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 tattattattaaatagtaaata 235 |||||||||||||||||||||| Sbjct: 26 tattattattaaatagtaaata 47
>gb|AY853467.1| Marsupenaeus japonicus isolate TW7 control region, partial sequence; mitochondrial Length = 505 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 tattattattaaatagtaaata 235 |||||||||||||||||||||| Sbjct: 26 tattattattaaatagtaaata 47
>gb|AY853460.1| Marsupenaeus japonicus isolate HK6 control region, partial sequence; mitochondrial Length = 505 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 tattattattaaatagtaaata 235 |||||||||||||||||||||| Sbjct: 26 tattattattaaatagtaaata 47
>gb|AY853456.1| Marsupenaeus japonicus isolate CB6 control region, partial sequence; mitochondrial Length = 504 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 tattattattaaatagtaaata 235 |||||||||||||||||||||| Sbjct: 26 tattattattaaatagtaaata 47
>gb|AY853453.1| Marsupenaeus japonicus isolate CA10 control region, partial sequence; mitochondrial Length = 505 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 tattattattaaatagtaaata 235 |||||||||||||||||||||| Sbjct: 26 tattattattaaatagtaaata 47
>emb|AL593844.4| Human DNA sequence from clone RP11-406O16 on chromosome 6 Contains the 3' part of a novel gene, complete sequence Length = 157929 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttatag 115 |||||||||||||||||||||| Sbjct: 71068 ttctttatttttatttttatag 71047
>emb|AL451010.4| Human DNA sequence from clone RP11-163M2 on chromosome 1 Contains a novel gene, a pseudogene similar to part of actin, beta (ACTB), the GLMN gene for glomulin, FKBP associated protein and a novel gene (FLJ13150), complete sequence Length = 184144 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 agttctttatttttatttttat 113 |||||||||||||||||||||| Sbjct: 20514 agttctttatttttatttttat 20493
>emb|AL356118.15| Human DNA sequence from clone RP11-487A2 on chromosome 13, complete sequence Length = 166245 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 agttctttatttttatttttat 113 |||||||||||||||||||||| Sbjct: 133468 agttctttatttttatttttat 133489
>gb|AC011726.11| Homo sapiens chromosome , clone RP11-14I17, complete sequence Length = 170074 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 agttctttatttttatttttat 113 |||||||||||||||||||||| Sbjct: 167590 agttctttatttttatttttat 167569
>gb|AC161766.2| Mus musculus BAC clone RP23-39O12 from chromosome 12, complete sequence Length = 224641 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 agttctttatttttatttttat 113 |||||||||||||||||||||| Sbjct: 75373 agttctttatttttatttttat 75352
>emb|AL645570.13| Mouse DNA sequence from clone RP23-377H12 on chromosome 11 Contains two novel genes, the 3' end of the Meis1 gene for myeloid ecotropic viral integration site 1 and two CpG islands, complete sequence Length = 190198 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 95 tctttatttttatttttatagt 116 |||||||||||||||||||||| Sbjct: 150995 tctttatttttatttttatagt 150974
>emb|BX546473.10| Zebrafish DNA sequence from clone DKEYP-51F2 in linkage group 3, complete sequence Length = 211253 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 94 ttctttatttttatttttatagtatt 119 |||||||||||||||||||| ||||| Sbjct: 56814 ttctttatttttatttttattgtatt 56789
>gb|AC012630.7| Homo sapiens chromosome 5 clone CTD-2158F3, complete sequence Length = 70065 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 agttctttatttttatttttat 113 |||||||||||||||||||||| Sbjct: 16563 agttctttatttttatttttat 16584
>gb|AC015743.9| Homo sapiens chromosome 8, clone RP11-1G11, complete sequence Length = 193989 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 agttctttatttttatttttat 113 |||||||||||||||||||||| Sbjct: 12511 agttctttatttttatttttat 12490
>dbj|AK138515.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330048D04 product:unclassifiable, full insert sequence Length = 3675 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 95 tctttatttttatttttatagt 116 |||||||||||||||||||||| Sbjct: 2283 tctttatttttatttttatagt 2304
>gb|AF349019.1|F349018S02 Homo sapiens topoisomerase I gene, exon 2; nuclear gene for mitochondrial product Length = 2975 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 agttctttatttttatttttat 113 |||||||||||||||||||||| Sbjct: 308 agttctttatttttatttttat 329
>gb|AC153923.4| Mus musculus 6 BAC RP23-82I13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 248275 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 agttctttatttttatttttat 113 |||||||||||||||||||||| Sbjct: 227022 agttctttatttttatttttat 227043
>gb|AC021001.5|AC021001 Homo sapiens chromosome 8, clone RP11-419L20, complete sequence Length = 175742 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 104 ttatttttatagtattacttctcatt 129 ||||||||||| |||||||||||||| Sbjct: 145452 ttatttttataatattacttctcatt 145477
>gb|AC105118.23| Homo sapiens chromosome 8, clone RP11-909N17, complete sequence Length = 179941 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 agttctttatttttatttttat 113 |||||||||||||||||||||| Sbjct: 3473 agttctttatttttatttttat 3452
>gb|AC012370.8| Homo sapiens BAC clone RP11-568D19 from 2, complete sequence Length = 105362 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 agttctttatttttatttttat 113 |||||||||||||||||||||| Sbjct: 78890 agttctttatttttatttttat 78911
>gb|AC067838.18| Homo sapiens chromosome 8, clone RP11-722E23, complete sequence Length = 104120 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 agttctttatttttatttttat 113 |||||||||||||||||||||| Sbjct: 31343 agttctttatttttatttttat 31364
>gb|AC087793.17| Homo sapiens chromosome 8, clone RP5-1118A7, complete sequence Length = 124060 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 agttctttatttttatttttat 113 |||||||||||||||||||||| Sbjct: 82823 agttctttatttttatttttat 82802
>gb|AC010200.8| Homo sapiens 12 BAC RP11-575G13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 158149 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttatag 115 |||||||||||||||||||||| Sbjct: 110707 ttctttatttttatttttatag 110686
>emb|Z98941.2|HS204E5 Human DNA sequence from clone XX-204E5 on chromosome 12, complete sequence Length = 129192 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 agttctttatttttatttttat 113 |||||||||||||||||||||| Sbjct: 125797 agttctttatttttatttttat 125776
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 180 ttagtagtattctcatttttatttaa 205 ||||| |||||||||||||||||||| Sbjct: 2577204 ttagttgtattctcatttttatttaa 2577229 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 tctttatttttatttttatagtatt 119 ||||||| ||||||||||||||||| Sbjct: 2271290 tctttatatttatttttatagtatt 2271314
>gb|AC090015.6| Homo sapiens 12 BAC RP11-711C17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186236 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 agttctttatttttatttttat 113 |||||||||||||||||||||| Sbjct: 177693 agttctttatttttatttttat 177672
>dbj|AP003083.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-179B7, complete sequence Length = 161488 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 88 atagagttctttatttttatttttat 113 ||||| |||||||||||||||||||| Sbjct: 96507 atagatttctttatttttatttttat 96532
>emb|CT025738.5| Mouse DNA sequence from clone RP24-378G24 on chromosome 12, complete sequence Length = 182200 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 agttctttatttttatttttat 113 |||||||||||||||||||||| Sbjct: 5447 agttctttatttttatttttat 5468
>emb|Y12853.1|HSP2X748 Homo sapiens P2X7 gene, exon 4-8 Length = 11266 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 agttctttatttttatttttat 113 |||||||||||||||||||||| Sbjct: 4341 agttctttatttttatttttat 4320
>gb|AC091144.12| Homo sapiens chromosome 8, clone RP11-359B20, complete sequence Length = 185872 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 agttctttatttttatttttat 113 |||||||||||||||||||||| Sbjct: 182993 agttctttatttttatttttat 182972
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 gttctttatttttatttttat 113 ||||||||||||||||||||| Sbjct: 484317 gttctttatttttatttttat 484337
>gb|AF487277.1| Lecanicillium muscarium, complete genome Length = 24499 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 tatttttatttttatagtatt 119 ||||||||||||||||||||| Sbjct: 3271 tatttttatttttatagtatt 3251
>gb|AY341443.1| Phaseolus vulgaris cultivar Sprite BAC 78L17, partial sequence Length = 106592 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 ttatttttatttttatagtat 118 ||||||||||||||||||||| Sbjct: 5161 ttatttttatttttatagtat 5141
>ref|NM_008091.2| Mus musculus GATA binding protein 3 (Gata3), mRNA Length = 2853 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 ctttatttttatttttatagtatta 120 ||||||| ||||||||||||||||| Sbjct: 2792 ctttattattatttttatagtatta 2768
>gb|AC119839.8| Mus musculus chromosome 1, clone RP24-170N13, complete sequence Length = 165405 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tttatttttatttttatagta 117 ||||||||||||||||||||| Sbjct: 82104 tttatttttatttttatagta 82124
>ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfamily A (CYP2A) on chromosome 19 Length = 413528 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 gttctttatttttatttttat 113 ||||||||||||||||||||| Sbjct: 379677 gttctttatttttatttttat 379657
>emb|CR932579.1|CNS0KYB9 Paramecium tetraurelia, Small GTPase rab, putative, complete gene Length = 3001 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 aaatagaatggaaatccaaaa 361 ||||||||||||||||||||| Sbjct: 1827 aaatagaatggaaatccaaaa 1847
>emb|CT009545.5| M.truncatula DNA sequence from clone MTH2-107B14 on chromosome 3, complete sequence Length = 96467 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 ctttatttttatttttatagt 116 ||||||||||||||||||||| Sbjct: 7145 ctttatttttatttttatagt 7165
>gb|AC092920.7| Homo sapiens 3 BAC RP11-255G21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164878 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 gttctttatttttatttttat 113 ||||||||||||||||||||| Sbjct: 59312 gttctttatttttatttttat 59332
>emb|CR407590.7| Zebrafish DNA sequence from clone CH211-153N15 in linkage group 2, complete sequence Length = 176623 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tttatttttatttttatagta 117 ||||||||||||||||||||| Sbjct: 32665 tttatttttatttttatagta 32645
>gb|AC116592.5| Mus musculus BAC clone RP24-90K3 from 2, complete sequence Length = 238657 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 ctttatttttatttttatagtatta 120 ||||||| ||||||||||||||||| Sbjct: 74882 ctttattattatttttatagtatta 74858
>gb|DP000044.2| Callithrix jacchus target 106 genomic scaffold Length = 574594 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 300 gttttctttatataagaatta 320 ||||||||||||||||||||| Sbjct: 345801 gttttctttatataagaatta 345781
>gb|AC149804.11| Medicago truncatula clone mth2-73h22, complete sequence Length = 121763 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 295 ataaagttttctttatataag 315 ||||||||||||||||||||| Sbjct: 48672 ataaagttttctttatataag 48652
>emb|AL732325.6| Human DNA sequence from clone RP11-692N21 on chromosome X Contains part of the SH3KBP1 gene for SH3-domain kinase binding protein 1 (CIN85), complete sequence Length = 96764 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttata 114 ||||||||||||||||||||| Sbjct: 14551 ttctttatttttatttttata 14531
>emb|AL445205.14| Human DNA sequence from clone RP11-24J23 on chromosome 1 Contains a novel gene (FLJ38972), the 3' end of the ROR1 gene for receptor tyrosine kinase-like orphan receptor 1, the 5' end of gene MGC35130 and a CpG island, complete sequence Length = 115936 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttata 114 ||||||||||||||||||||| Sbjct: 19594 ttctttatttttatttttata 19614
>emb|AL357519.19| Human DNA sequence from clone RP11-367G18 on chromosome 6 Contains a putative novel gene and a ubiquitin/ ribosomal protein S27A (RPS27A) fusion protein pseudogene, complete sequence Length = 157021 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 92 agttctttatttttatttttatagt 116 |||||||||||| |||||||||||| Sbjct: 135890 agttctttatttctatttttatagt 135866
>gb|AC083928.11| Homo sapiens chromosome 8, clone RP11-77C4, complete sequence Length = 144023 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 179 attagtagtattctcatttttattt 203 |||| |||||||||||||||||||| Sbjct: 33716 attattagtattctcatttttattt 33692
>emb|AL353652.17| Human DNA sequence from clone RP11-279F15 on chromosome 13 Contains a CpG island, complete sequence Length = 126837 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttata 114 ||||||||||||||||||||| Sbjct: 38454 ttctttatttttatttttata 38434
>emb|AL354661.14| Human DNA sequence from clone RP11-386D8 on chromosome 9 Contains the gene for a novel olfactory (seven transmembrane helix) receptor and the 3' end of the gene for a novel protein (including KIAA0368), complete sequence Length = 138069 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 gttctttatttttatttttat 113 ||||||||||||||||||||| Sbjct: 75436 gttctttatttttatttttat 75416
>gb|AC160026.2| Pan troglodytes BAC clone CH251-166J6 from chromosome unknown, complete sequence Length = 172151 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 89 tagagttctttatttttatttttat 113 |||| |||||||||||||||||||| Sbjct: 103551 tagacttctttatttttatttttat 103527
>emb|AL139341.9| Human DNA sequence from clone RP11-99N20 on chromosome 10 Contains the 5' end of a novel gene, the gene for glutathione transferase omega 1 (GSTO1), the 5' end of a variant of the gene for a novel glutathione-S-transferase and two CpG islands, complete sequence Length = 104378 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 gagttctttatttttattttt 111 ||||||||||||||||||||| Sbjct: 7672 gagttctttatttttattttt 7652
>emb|AL096855.48|HS1115A15 Human DNA sequence from clone RP5-1115A15 on chromosome 1p36.11-36.31 Contains part of the RERE gene for arginine-glutamic acid dipeptide (RE) repeats (KIAA0458, FLJ38775), a novel gene and a CpG island, complete sequence Length = 178403 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 gttctttatttttatttttat 113 ||||||||||||||||||||| Sbjct: 77711 gttctttatttttatttttat 77691
>emb|AL024507.7|HS191J18 Human DNA sequence from clone RP1-191J18 on chromosome 6q16.1-22.33 Contains the SEC63 gene for SEC63-like (S. cerevisiae), a 60S ribosomal protein 23A (RPL23A) pseudogene, a ribosomal protein L14 (RPL14) pseudogene, a pseudogene similar to part of methylene tetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase (MTHFD2) (NMDMC) and three CpG islands, complete sequence Length = 152408 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 89 tagagttctttatttttatttttat 113 |||| |||||||||||||||||||| Sbjct: 54834 tagacttctttatttttatttttat 54858
>emb|AL031737.2|HS8B22 Human DNA sequence from clone RP1-8B22 on chromosome 1p35.1-36.21 Contains a dynein, cytoplasmic light chain 1 (DNCL1) pseudogene, complete sequence Length = 133760 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 gttctttatttttatttttat 113 ||||||||||||||||||||| Sbjct: 12935 gttctttatttttatttttat 12955
>gb|AC107394.3| Homo sapiens BAC clone RP11-617I14 from 4, complete sequence Length = 170971 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 89 tagagttctttatttttatttttat 113 ||||||| ||||||||||||||||| Sbjct: 111147 tagagttgtttatttttatttttat 111171
>emb|AL162508.1|ATT7H20 Arabidopsis thaliana DNA chromosome 5, BAC clone T7H20 (ESSA project) Length = 87581 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 agttctttatttttatttttatagt 116 |||| |||||||||||||||||||| Sbjct: 79440 agttttttatttttatttttatagt 79464
>gb|AC105130.8| Homo sapiens chromosome 8, clone RP11-357L10, complete sequence Length = 188410 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 tatttttatagtattacttct 125 ||||||||||||||||||||| Sbjct: 185866 tatttttatagtattacttct 185846
>gb|BC062915.1| Mus musculus GATA binding protein 3, mRNA (cDNA clone MGC:85992 IMAGE:6826352), complete cds Length = 2853 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 ctttatttttatttttatagtatta 120 ||||||| ||||||||||||||||| Sbjct: 2792 ctttattattatttttatagtatta 2768
>gb|AC115720.4| Homo sapiens chromosome 8, clone CTD-2015J21, complete sequence Length = 98067 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 tatttttatagtattacttct 125 ||||||||||||||||||||| Sbjct: 20657 tatttttatagtattacttct 20677
>dbj|AK124590.1| Homo sapiens cDNA FLJ42599 fis, clone BRACE3010416 Length = 4178 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 gttctttatttttatttttat 113 ||||||||||||||||||||| Sbjct: 603 gttctttatttttatttttat 623
>gb|AC144473.8| Medicago truncatula clone mth2-15l5, complete sequence Length = 128860 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 ctttatttttatttttatagt 116 ||||||||||||||||||||| Sbjct: 101237 ctttatttttatttttatagt 101257
>gb|AC126779.19| Medicago truncatula clone mth2-34m14, complete sequence Length = 128856 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 97 tttatttttatttttatagtattac 121 ||||||||||||||||||| ||||| Sbjct: 41010 tttatttttatttttatagaattac 40986
>gb|DQ400123.1|DQ400116S8 Mus musculus strain C3H/HeJ GATA binding protein 3 (Gata3) gene, exon 6 and complete cds Length = 2463 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 ctttatttttatttttatagtatta 120 ||||||| ||||||||||||||||| Sbjct: 1682 ctttattattatttttatagtatta 1658
>gb|DQ400115.1|DQ400108S8 Mus musculus strain A/J GATA binding protein 3 (Gata3) gene, exon 6 and complete cds Length = 2463 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 ctttatttttatttttatagtatta 120 ||||||| ||||||||||||||||| Sbjct: 1682 ctttattattatttttatagtatta 1658
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 agttctttatttttattttta 112 ||||||||||||||||||||| Sbjct: 1361350 agttctttatttttattttta 1361330
>gb|AC079178.20| Homo sapiens Xp BAC RP11-702C7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114665 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 tagtctcttattattattaaa 226 ||||||||||||||||||||| Sbjct: 111324 tagtctcttattattattaaa 111304
>gb|AC093416.2| Homo sapiens chromosome 3 clone RP11-659P16, complete sequence Length = 189308 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 89 tagagttctttatttttatttttat 113 ||||||| ||||||||||||||||| Sbjct: 127918 tagagttttttatttttatttttat 127894
>gb|AC079238.7| Homo sapiens BAC clone RP11-719L21 from 4, complete sequence Length = 142462 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttata 114 ||||||||||||||||||||| Sbjct: 3878 ttctttatttttatttttata 3858
>dbj|AK157939.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930010J11 product:GATA binding protein 3, full insert sequence Length = 3079 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 ctttatttttatttttatagtatta 120 ||||||| ||||||||||||||||| Sbjct: 3061 ctttattattatttttatagtatta 3037
>gb|AC022558.9| Homo sapiens chromosome 15, clone RP11-90B9, complete sequence Length = 186403 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 88 atagagttctttatttttattttta 112 |||||||| |||||||||||||||| Sbjct: 59061 atagagttttttatttttattttta 59085
>gb|AC163757.5| Pan troglodytes BAC clone CH251-272C9 from chromosome unknown, complete sequence Length = 169213 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 gagttctttatttttattttt 111 ||||||||||||||||||||| Sbjct: 114525 gagttctttatttttattttt 114505
>emb|BX296554.9| Zebrafish DNA sequence from clone DKEYP-30G1 in linkage group 5, complete sequence Length = 126703 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 88 atagagttctttatttttattttta 112 |||||||||||| |||||||||||| Sbjct: 89426 atagagttctttttttttattttta 89450
>gb|AC073333.5| Homo sapiens BAC clone RP11-455J15 from 7, complete sequence Length = 165616 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 gttctttatttttatttttat 113 ||||||||||||||||||||| Sbjct: 68561 gttctttatttttatttttat 68581
>gb|AC159019.4| Pan troglodytes BAC clone CH251-550K12 from chromosome unknown, complete sequence Length = 196429 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 89 tagagttctttatttttatttttat 113 |||| |||||||||||||||||||| Sbjct: 179062 tagacttctttatttttatttttat 179086
>gb|AC149359.2| Phakopsora pachyrhizi clone JGIAFNA-41F17, complete sequence Length = 40870 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 gttctttatttttatttttat 113 ||||||||||||||||||||| Sbjct: 1879 gttctttatttttatttttat 1859
>gb|AC139143.5| Homo sapiens chromosome 11, clone CTD-3008O6, complete sequence Length = 55001 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttata 114 ||||||||||||||||||||| Sbjct: 49227 ttctttatttttatttttata 49207
>gb|AC008403.8| Homo sapiens chromosome 19 clone CTC-273B12, complete sequence Length = 190076 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 gttctttatttttatttttat 113 ||||||||||||||||||||| Sbjct: 162425 gttctttatttttatttttat 162405
>gb|AC084650.1|CBRG45N14 Caenorhabditis briggsae cosmid G45N14, complete sequence Length = 41442 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 ttatttttatttttatagtat 118 ||||||||||||||||||||| Sbjct: 8160 ttatttttatttttatagtat 8140
>gb|AC011510.7|AC011510 Homo sapiens chromosome 19 clone CTD-2195B23, complete sequence Length = 129402 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 gttctttatttttatttttat 113 ||||||||||||||||||||| Sbjct: 6149 gttctttatttttatttttat 6129
>gb|AC068580.23| Homo sapiens chromosome 11, clone RP11-295K3, complete sequence Length = 120298 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttata 114 ||||||||||||||||||||| Sbjct: 11885 ttctttatttttatttttata 11865
>gb|AC124069.7| Homo sapiens chromosome 8, clone RP11-326L2, complete sequence Length = 174025 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttata 114 ||||||||||||||||||||| Sbjct: 168841 ttctttatttttatttttata 168821
>gb|AC027117.6| Homo sapiens chromosome 8, clone RP11-806O11, complete sequence Length = 160223 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttata 114 ||||||||||||||||||||| Sbjct: 71340 ttctttatttttatttttata 71360
>emb|BX571798.5| Zebrafish DNA sequence from clone DKEY-199I24 in linkage group 18, complete sequence Length = 108129 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 tagtctcttattattattaaa 226 ||||||||||||||||||||| Sbjct: 64123 tagtctcttattattattaaa 64143
>emb|AL929210.4| Zebrafish DNA sequence from clone CH211-142E15, complete sequence Length = 168383 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 213 ttattattattaaatagtaaataaa 237 |||||||||||||||| |||||||| Sbjct: 90952 ttattattattaaataataaataaa 90976
>gb|AC125319.5| Mus musculus BAC clone RP23-472L3 from 5, complete sequence Length = 186202 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 gttctttatttttatttttat 113 ||||||||||||||||||||| Sbjct: 137802 gttctttatttttatttttat 137782
>dbj|AP006249.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-383B10, complete sequence Length = 195290 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttata 114 ||||||||||||||||||||| Sbjct: 134891 ttctttatttttatttttata 134871
>emb|CT476832.2| Pig DNA sequence from clone XX-BE284E13 on chromosome 11, complete sequence Length = 180778 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 200 atttaatagtctcttattattatta 224 |||||||||||| |||||||||||| Sbjct: 60465 atttaatagtcttttattattatta 60489
>gb|AC159036.3| Pan troglodytes BAC clone CH251-318E5 from chromosome unknown, complete sequence Length = 156920 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 gagttctttatttttattttt 111 ||||||||||||||||||||| Sbjct: 103196 gagttctttatttttattttt 103216
>emb|CR956434.13| M.truncatula DNA sequence from clone MTH2-35N9 on chromosome 3, complete sequence Length = 113074 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 91 gagttctttatttttatttttatag 115 ||||| ||||||||||||||||||| Sbjct: 18407 gagttttttatttttatttttatag 18383
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 tacaccatatctaaatagaat 349 ||||||||||||||||||||| Sbjct: 51190 tacaccatatctaaatagaat 51170
>emb|AL845529.10| Mouse DNA sequence from clone RP23-276D17 on chromosome 2, complete sequence Length = 166971 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 96 ctttatttttatttttatagtatta 120 ||||||| ||||||||||||||||| Sbjct: 145166 ctttattattatttttatagtatta 145190
>emb|BX005010.24| Zebrafish DNA sequence from clone DKEY-8F16 in linkage group 17, complete sequence Length = 236557 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 152 tatcttaattaggttctaattattctaattagtagta 188 |||||||||||||| ||||||| ||| ||||||||| Sbjct: 4522 tatcttaattaggtactaattactcttgttagtagta 4558
>dbj|AP004928.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01G01, TM0081b, complete sequence Length = 44292 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 88 atagagttctttatttttattttta 112 ||||| ||||||||||||||||||| Sbjct: 7784 atagatttctttatttttattttta 7760
>dbj|AP004526.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT05E07, TM0055, complete sequence Length = 94516 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 aatctttaaagaagatgcagc 409 ||||||||||||||||||||| Sbjct: 14551 aatctttaaagaagatgcagc 14531
>dbj|AB020865.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular colorectal and non-small cell lung cancer , segment 8/11 Length = 100000 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttata 114 ||||||||||||||||||||| Sbjct: 35753 ttctttatttttatttttata 35733
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome Length = 1777831 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 1066731 ttctttatttttatttttat 1066712
>gb|AC108429.11| Mus musculus chromosome 7, clone RP23-161B5, complete sequence Length = 186903 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 tttatttttatttttatagtatta 120 |||||||||||||||||| ||||| Sbjct: 17550 tttatttttatttttatattatta 17573
>gb|AC099637.7| Mus musculus chromosome 1, clone RP24-257C20, complete sequence Length = 169573 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 143366 ttctttatttttatttttat 143385
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 tttttatagtattacttctcatta 130 |||||||||||| ||||||||||| Sbjct: 69401 tttttatagtatcacttctcatta 69378
>gb|AC154221.3| Mus musculus BAC clone RP24-373L7 from chromosome 13, complete sequence Length = 157332 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 tattattaaatagtaaataa 236 |||||||||||||||||||| Sbjct: 90125 tattattaaatagtaaataa 90106
>gb|AC120348.9| Mus musculus chromosome 5, clone RP23-55P22, complete sequence Length = 244565 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 90 agagttctttatttttatttttat 113 |||| ||||||||||||||||||| Sbjct: 117071 agagatctttatttttatttttat 117094
>gb|AY796203.1| Homo sapiens cytochrome P450, family 2, subfamily C, polypeptide 19 (CYP2C19) gene, complete cds Length = 94219 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 55553 ttctttatttttatttttat 55572
>gb|AE014832.1| Plasmodium falciparum 3D7 chromosome 10 section 4 of 7 of the complete sequence Length = 258658 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 155118 ttctttatttttatttttat 155099
>gb|AE014833.1| Plasmodium falciparum 3D7 chromosome 10 section 5 of 7 of the complete sequence Length = 252394 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 143371 ttctttatttttatttttat 143352 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 71191 ttctttatttttatttttat 71210
>gb|AE014825.1| Plasmodium falciparum 3D7 chromosome 14 section 10 of 13 of the complete sequence Length = 250053 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 14920 ttctttatttttatttttat 14939
>gb|AF071484.1|AH007067S07 Homo sapiens potassium channel (KCNQ3) gene, exon 8 Length = 1035 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 1011 ttctttatttttatttttat 992
>gb|AC158966.5| Mus musculus chromosome 1, clone RP23-382I8, complete sequence Length = 183519 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 94041 ttctttatttttatttttat 94060
>gb|AC165138.6| Mus musculus chromosome 15, clone RP24-61P10, complete sequence Length = 170282 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 6464 ttctttatttttatttttat 6483
>gb|AE001403.1| Plasmodium falciparum 3D7 chromosome 2 section 40 of 73 of the complete sequence Length = 13684 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 2889 ttctttatttttatttttat 2870
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence Length = 2205233 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 1683202 ttctttatttttatttttat 1683221
>gb|AC005368.1| Homo sapiens chromosome 5, BAC clone 194j18 (LBNL H158), complete sequence Length = 118995 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 11050 ttctttatttttatttttat 11031
>gb|AC091527.21| Trypanosoma brucei chromosome 7 clone RPCI93-33N13, complete sequence Length = 114057 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 4256 ttctttatttttatttttat 4275
>gb|AC159439.1| Trypanosoma brucei chromosome 7 clone RPCI93-2F2, complete sequence Length = 134290 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 99509 ttctttatttttatttttat 99528
>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07, complete sequence Length = 122120 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 58322 ttctttatttttatttttat 58303
>gb|AC133871.13| Mus musculus chromosome 1, clone RP24-414I11, complete sequence Length = 203423 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ttctaattattctaattagt 184 |||||||||||||||||||| Sbjct: 116326 ttctaattattctaattagt 116345
>gb|AC102460.13| Mus musculus chromosome 3, clone RP24-318G1, complete sequence Length = 197362 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 tctttatttttatttttata 114 |||||||||||||||||||| Sbjct: 88660 tctttatttttatttttata 88641
>gb|AC132266.4| Mus musculus BAC clone RP24-380L14 from chromosome 10, complete sequence Length = 176497 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 aatagagttctttattttta 106 |||||||||||||||||||| Sbjct: 24574 aatagagttctttattttta 24555
>gb|AC164700.3| Mus musculus BAC clone RP24-548M16 from chromosome 5, complete sequence Length = 212172 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 162040 ttctttatttttatttttat 162021
>gb|AC163655.3| Mus musculus BAC clone RP23-264P21 from chromosome 6, complete sequence Length = 185583 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 79693 ttctttatttttatttttat 79712
>gb|AC118285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1206_C08, complete sequence Length = 115026 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 14623 ttctttatttttatttttat 14604
>gb|AC102440.12| Mus musculus chromosome 1, clone RP24-146C18, complete sequence Length = 144770 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 ctcttattattattaaatagtaaa 233 ||||||||||||||||||| |||| Sbjct: 34830 ctcttattattattaaatattaaa 34853
>gb|AC159376.12| Mus musculus 10 BAC RP23-114N21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 223292 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 43333 ttctttatttttatttttat 43352
>gb|AC118069.8| Rattus norvegicus 9 BAC CH230-343O14 (Children's Hospital Oakland Research Institute) complete sequence Length = 179244 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 66306 ttctttatttttatttttat 66287
>gb|AY531391.1| Schizaphis graminum mitochondrion, complete genome Length = 15721 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 213 ttattattattaaatagtaaataa 236 |||||||||||||||| ||||||| Sbjct: 5945 ttattattattaaataataaataa 5968
>gb|AC183963.2| Pan troglodytes BAC clone CH251-562F21 from chromosome 17, complete sequence Length = 213058 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 153825 ttctttatttttatttttat 153806
>gb|AC183964.3| Pan troglodytes BAC clone CH251-654L7 from chromosome 12, complete sequence Length = 213075 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 209 tctcttattattattaaatagtaa 232 ||||||||||||||| |||||||| Sbjct: 110687 tctcttattattattgaatagtaa 110664
>gb|AE006654.1| Sulfolobus solfataricus P2 section 13 of 272 of the complete genome Length = 11376 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 ttatttttatagtattactt 123 |||||||||||||||||||| Sbjct: 1046 ttatttttatagtattactt 1065
>gb|AY312507.1| Thelohania solenopsae isolate LA 2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence Length = 318 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 ttttctttatataagaatta 320 |||||||||||||||||||| Sbjct: 146 ttttctttatataagaatta 165
>gb|AY312506.1| Thelohania solenopsae isolate Florida small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence Length = 339 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 ttttctttatataagaatta 320 |||||||||||||||||||| Sbjct: 157 ttttctttatataagaatta 176
>gb|AY312505.1| Thelohania solenopsae isolate Texas 3430 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence Length = 317 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 ttttctttatataagaatta 320 |||||||||||||||||||| Sbjct: 139 ttttctttatataagaatta 158
>gb|AY312504.1| Thelohania solenopsae isolate Texas 3427 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence Length = 330 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 ttttctttatataagaatta 320 |||||||||||||||||||| Sbjct: 156 ttttctttatataagaatta 175
>gb|AY312503.1| Thelohania solenopsae isolate Texas 3344 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence Length = 283 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 ttttctttatataagaatta 320 |||||||||||||||||||| Sbjct: 132 ttttctttatataagaatta 151
>gb|AY312502.1| Thelohania solenopsae isolate Texas 3362 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence Length = 1726 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 ttttctttatataagaatta 320 |||||||||||||||||||| Sbjct: 1236 ttttctttatataagaatta 1255
>gb|AC132595.3| Mus musculus BAC clone RP24-229G7 from chromosome 7, complete sequence Length = 155547 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 139549 ttctttatttttatttttat 139568
>gb|AC149031.1| Rhinolophus ferrumequinum clone VMRC7-44G7, complete sequence Length = 192138 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 45351 ttctttatttttatttttat 45332
>gb|AC087555.3| Papio anubis clone RP41-63I4, complete sequence Length = 157673 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 66108 ttctttatttttatttttat 66089
>gb|AC116473.13| Mus musculus chromosome 8, clone RP23-385E22, complete sequence Length = 186155 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 181649 ttctttatttttatttttat 181668
>gb|AC131332.12| Mus musculus chromosome 12, clone RP23-480O18, complete sequence Length = 182672 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 145127 ttctttatttttatttttat 145108
>gb|AC166827.2| Mus musculus BAC clone RP23-359M9 from chromosome 12, complete sequence Length = 219729 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 155485 ttctttatttttatttttat 155504
>gb|AC110227.6| Mus musculus chromosome 9, clone RP24-331H14, complete sequence Length = 196758 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 181728 ttctttatttttatttttat 181709
>gb|AC164399.4| Mus musculus chromosome 8, clone RP23-338K3, complete sequence Length = 213363 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 131977 ttctttatttttatttttat 131958
>gb|AC010976.6| Homo sapiens BAC clone RP11-286H15 from 2, complete sequence Length = 204142 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 aaatagagttctttatttttattt 109 |||||||||| ||||||||||||| Sbjct: 57072 aaatagagttatttatttttattt 57049
>gb|AC004848.1| Homo sapiens PAC clone RP4-649P17 from 7, complete sequence Length = 135214 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 124370 ttctttatttttatttttat 124351
>gb|AC005550.1| Homo sapiens PAC clone RP4-620P6 from 7, complete sequence Length = 133237 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 ttggatgaatctttaaagaa 401 |||||||||||||||||||| Sbjct: 26960 ttggatgaatctttaaagaa 26941
>gb|AC133498.2| Mus musculus BAC clone RP24-241K8 from chromosome 13, complete sequence Length = 159112 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 37105 ttctttatttttatttttat 37124
>gb|AC133950.4| Mus musculus BAC clone RP24-243C16 from chromosome 7, complete sequence Length = 176244 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 tttatttttatttttatagtatta 120 |||||||||||||||||| ||||| Sbjct: 134159 tttatttttatttttatattatta 134182
>emb|CT009577.5| Mouse DNA sequence from clone RP23-24C24 on chromosome 16, complete sequence Length = 258862 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 141019 ttctttatttttatttttat 141000
>emb|CR762383.11| Zebrafish DNA sequence from clone DKEY-28M7 in linkage group 6, complete sequence Length = 101572 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 tctttatttttatttttata 114 |||||||||||||||||||| Sbjct: 88634 tctttatttttatttttata 88653
>emb|BX908762.11| Zebrafish DNA sequence from clone CH211-222N22 in linkage group 3, complete sequence Length = 113490 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 tagagttctttatttttattttta 112 ||||||| |||||||||||||||| Sbjct: 97324 tagagttttttatttttattttta 97301
>emb|BX088712.23| Zebrafish DNA sequence from clone CH211-199H2 in linkage group 11, complete sequence Length = 198099 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tttatttttatttttatagt 116 |||||||||||||||||||| Sbjct: 89536 tttatttttatttttatagt 89555
>gb|AC112153.4| Mus musculus BAC clone RP24-93G11 from chromosome 19, complete sequence Length = 180944 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 90095 ttctttatttttatttttat 90114
>gb|AC115290.5| Mus musculus BAC clone RP23-65M10 from chromosome 10, complete sequence Length = 245623 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 172227 ttctttatttttatttttat 172208
>gb|AC133193.3| Mus musculus BAC clone RP23-396L1 from chromosome 2, complete sequence Length = 180931 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 tctttatttttatttttata 114 |||||||||||||||||||| Sbjct: 18543 tctttatttttatttttata 18524
>gb|AC124503.2| Mus musculus BAC clone RP23-417F2 from chromosome 10, complete sequence Length = 206343 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 23162 ttctttatttttatttttat 23181
>gb|U95743.1|HUU95743 Homo sapiens chromosome 16 BAC clone CIT987-SK65D3, complete sequence Length = 192730 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 124838 ttctttatttttatttttat 124819
>emb|CR954165.4| Human DNA sequence from clone RP11-424N23 on chromosome 1, complete sequence Length = 34050 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ttatttttatttttatagta 117 |||||||||||||||||||| Sbjct: 12558 ttatttttatttttatagta 12577
>ref|XM_808811.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510149.30) partial mRNA Length = 2313 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 81 ttctttatttttatttttat 100
>gb|AC011248.8| Homo sapiens 12 BAC RP11-14P21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 111312 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 97441 ttctttatttttatttttat 97422
>gb|AC127257.3| Mus musculus BAC clone RP24-296O9 from chromosome 3, complete sequence Length = 166030 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 108747 ttctttatttttatttttat 108728
>gb|AC129326.3| Mus musculus BAC clone RP23-326H12 from chromosome 19, complete sequence Length = 184128 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 117734 ttctttatttttatttttat 117715
>gb|AC125091.3| Mus musculus BAC clone RP24-165P5 from chromosome 18, complete sequence Length = 188837 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 67205 ttctttatttttatttttat 67186
>ref|XM_647191.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (124.t00009) partial mRNA Length = 1809 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 213 ttattattattaaatagtaaataa 236 |||||||||| ||||||||||||| Sbjct: 495 ttattattataaaatagtaaataa 518
>ref|XM_721763.1| Plasmodium yoelii yoelii str. 17XNL CCAAT-box DNA binding protein subunit B (PY06243) partial mRNA Length = 2699 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 tttatttttatttttatagtatta 120 ||||||||||||||||||| |||| Sbjct: 1391 tttatttttatttttatagaatta 1414
>gb|AC092022.5| Homo sapiens BAC clone RP11-750F10 from 7, complete sequence Length = 170141 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 98521 ttctttatttttatttttat 98502
>gb|AC073418.6| Homo sapiens BAC clone RP11-334C6 from 7, complete sequence Length = 83743 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 47319 ttctttatttttatttttat 47338
>gb|AC093775.2| Homo sapiens BAC clone RP11-138B9 from 7, complete sequence Length = 104892 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 cttattattattaaatagta 231 |||||||||||||||||||| Sbjct: 92926 cttattattattaaatagta 92945
>gb|AC100550.7| Mus musculus chromosome 9, clone RP23-152P11, complete sequence Length = 188119 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 91919 ttctttatttttatttttat 91900
>gb|AC117594.8| Mus musculus chromosome 3, clone RP23-335D16, complete sequence Length = 230457 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 tctttatttttatttttata 114 |||||||||||||||||||| Sbjct: 127144 tctttatttttatttttata 127163
>gb|AC004852.2| Homo sapiens PAC clone RP4-668E10 from 7, complete sequence Length = 158541 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 tctttatttttatttttata 114 |||||||||||||||||||| Sbjct: 35745 tctttatttttatttttata 35726
>gb|AC004929.2| Homo sapiens PAC clone RP5-917G4 from 7, complete sequence Length = 106827 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 34048 ttctttatttttatttttat 34067
>gb|AC116451.7| Mus musculus chromosome 19, clone RP24-273P9, complete sequence Length = 218079 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 216941 ttctttatttttatttttat 216922
>ref|XM_671420.1| Plasmodium berghei strain ANKA hypothetical protein (PB001018.03.0) partial mRNA Length = 3252 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 tttatttttatttttatagtatta 120 ||||||||||||||||||| |||| Sbjct: 1391 tttatttttatttttatagaatta 1414
>gb|AC099690.8| Mus musculus chromosome 8, clone RP23-73E9, complete sequence Length = 225655 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 182787 ttctttatttttatttttat 182806
>gb|AC137119.7| Mus musculus chromosome 6, clone RP23-252K4, complete sequence Length = 226354 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 gagttctttatttttatttttata 114 ||||| |||||||||||||||||| Sbjct: 76803 gagttttttatttttatttttata 76826
>gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, complete sequence Length = 264425 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 agagttctttatttttatttttat 113 |||| ||||||||||||||||||| Sbjct: 235811 agagatctttatttttatttttat 235788
>gb|AC111141.7| Mus musculus chromosome 3, clone RP23-369G12, complete sequence Length = 241179 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gttctttatttttattttta 112 |||||||||||||||||||| Sbjct: 123142 gttctttatttttattttta 123161
>gb|AC165968.3| Mus musculus BAC clone RP23-181K4 from chromosome 7, complete sequence Length = 190840 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 108699 ttctttatttttatttttat 108718
>gb|AC160462.6| Mus musculus chromosome 1, clone RP23-225K21, complete sequence Length = 197253 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 ttctaattattctaattagt 184 |||||||||||||||||||| Sbjct: 195828 ttctaattattctaattagt 195809
>gb|AC141923.27| Medicago truncatula clone mth2-7f19, complete sequence Length = 116685 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 agttctttatttttattttt 111 |||||||||||||||||||| Sbjct: 60799 agttctttatttttattttt 60818
>gb|AC146567.10| Medicago truncatula clone mth2-99p24, complete sequence Length = 141672 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 tctttatttttatttttata 114 |||||||||||||||||||| Sbjct: 38975 tctttatttttatttttata 38994
>gb|AC146590.25| Medicago truncatula clone mth2-145p10, complete sequence Length = 130834 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 tctttatttttatttttata 114 |||||||||||||||||||| Sbjct: 117484 tctttatttttatttttata 117465
>gb|AC153123.10| Medicago truncatula clone mte1-72m7, complete sequence Length = 105895 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 tctttatttttatttttata 114 |||||||||||||||||||| Sbjct: 16010 tctttatttttatttttata 15991
>gb|AC152752.18| Medicago truncatula clone mth2-89c9, complete sequence Length = 117577 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 tttatttttatttttatagtatta 120 |||||||||||||||||| ||||| Sbjct: 91869 tttatttttatttttataatatta 91892
>gb|AC097752.7| Rattus norvegicus 1 BAC CH230-75H6 (Children's Hospital Oakland Research Institute) complete sequence Length = 245907 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 gagttctttatttttatttttata 114 ||||| |||||||||||||||||| Sbjct: 155177 gagttttttatttttatttttata 155154
>gb|AC109192.9| Mus musculus, clone RP24-360F5, complete sequence Length = 163237 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 tttttatttttatagtatta 120 |||||||||||||||||||| Sbjct: 18626 tttttatttttatagtatta 18645
>gb|AC058788.89| Mus musculus strain C57BL/6J clone rp23-284a9 map 5, complete sequence Length = 200015 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 88601 ttctttatttttatttttat 88582
>emb|BX649466.19| Zebrafish DNA sequence from clone DKEY-31C8 in linkage group 12, complete sequence Length = 101015 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 agttctttatttttattttt 111 |||||||||||||||||||| Sbjct: 67698 agttctttatttttattttt 67679
>emb|CR381676.9| Zebrafish DNA sequence from clone CH211-11J2 in linkage group 7, complete sequence Length = 200769 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ttatttttatttttatagta 117 |||||||||||||||||||| Sbjct: 112836 ttatttttatttttatagta 112855
>emb|AL928921.21| Human DNA sequence from clone RP13-392I16 on chromosome 1, complete sequence Length = 142916 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 114798 ttctttatttttatttttat 114817
>emb|Z93931.1|HS438G17 Human DNA sequence from clone RP3-438G17 on chromosome 6q22 Contains a high mobility group protein pseudogene, complete sequence Length = 148198 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 14749 ttctttatttttatttttat 14768
>emb|Z93929.1|HS272E8 Human DNA sequence from clone RP1-272E8 on chromosome Xp22.13-22.31 Contains a pseudogene similar to MDM2-Like P53-binding protein, the 5' end of the RAI2 gene for retinoic acid induced 2 and one CpG island, complete sequence Length = 117968 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 21172 ttctttatttttatttttat 21191
>emb|Z83841.1|HS323B6 Human DNA sequence from clone RP3-323B6 on chromosome Xq11-12 Contains a adaptor-related protein complex 1 (AP1M2) pseudogene, a pseudogene similar to part of TLE family (transducin-like enhancer of split (E(sp1) homolog, Drosophila)) and two CpG islands, complete sequence Length = 112762 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 38770 ttctttatttttatttttat 38751
>emb|AL772197.12| Human DNA sequence from clone RP11-24O6 on chromosome X Contains the 5' end of the SH3KBP1 gene for SH3-domain kinase binding protein 1 (CIN85), two novel genes and one CpG island, complete sequence Length = 106342 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 4330 ttctttatttttatttttat 4311
>emb|BX664740.3| Human DNA sequence from clone WI2-85598E4 on chromosome 1 Contains the 5' end of the IPP gene for intracisternal A particle-promoted polypeptide and a CpG island, complete sequence Length = 38002 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 36356 ttctttatttttatttttat 36375
>emb|BX537114.2| Human DNA sequence from clone RP11-289H16 on chromosome 1 Contains part of the gene for a novel protein similar to formin binding protein 2 (FNBP2) and a novel gene, complete sequence Length = 156399 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ttatttttatttttatagta 117 |||||||||||||||||||| Sbjct: 59099 ttatttttatttttatagta 59080
>emb|AL691458.7| Human DNA sequence from clone RP11-13F15 on chromosome 10, complete sequence Length = 69133 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 11434 ttctttatttttatttttat 11415
>emb|AL603882.13| Human DNA sequence from clone RP11-630I5 on chromosome 1 Contains the 5' end of the gene for microtubule associated testis specific serine/threonine protein kinase (MAST205), a ribosomal protein L6 (RPL6) pseudogene and a CpG island, complete sequence Length = 78745 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 354 ttctttatttttatttttat 373
>emb|AL513331.17| Human DNA sequence from clone RP11-157D18 on chromosome 1 Contains a novel gene (MGC47816), a ribosomal protein S15 (RPS15) pseudogene, the 3' end of the ZMYND12 gene for zinc finger MYND domain containing 12 and one CpG island, complete sequence Length = 69373 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 61523 ttctttatttttatttttat 61504
>emb|AL451140.15| Human DNA sequence from clone RP11-540H22 on chromosome 9 Contains the 5' end of a novel gene and the 3' end of a novel gene, complete sequence Length = 187738 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 168984 ttctttatttttatttttat 168965
>emb|AL513524.8| Human DNA sequence from clone RP11-295F4 on chromosome 6 Contains a ribosomal protein L21 (RPL21) pseudogene, a trace amine receptor 3 (TAR3) pseudogene, the GPR102 gene for G protein-coupled receptor 102 (TA5, TAR5), the gene for trace amine receptor 4 (TA4), the gene for a novel trace amine receptor (putative neurotransmitter receptor, PNR), a trace amine receptor pseudogene, the G protein-coupled receptor 57 (GRP57) pseudogene, the GPR58 gene for G protein-coupled receptor 58 and the gene for trace amine receptor 1 (TA1) (Tar1), complete sequence Length = 141028 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 88221 ttctttatttttatttttat 88240
>emb|AL360231.16| Human DNA sequence from clone RP11-110H10 on chromosome 10 Contains the 5' end of the CACNB2 gene for calcium channel voltage-dependent beta 2 subunit, the 3' end of a novel gene (FLJ30499), the 5' end of a novel gene (FLJ30450) and CpG island, complete sequence Length = 154244 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 110003 ttctttatttttatttttat 110022
>emb|AL359962.15| Human DNA sequence from clone RP11-104L21 on chromosome 1q23.3-25.1 Contains the 3' end of the POU2F1 gene for POU domain class 2 transcription factor 1, the 3' end of the CD3Z gene for CD3Z antigen zeta polypeptide (TiT3 complex) and two CpG islands, complete sequence Length = 67173 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 42264 ttctttatttttatttttat 42245
>emb|AL359980.9| Human DNA sequence from clone RP5-1027O15 on chromosome 11, complete sequence Length = 83218 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 104 ttatttttatagtattacttctcattat 131 ||||| |||||||||||||||| ||||| Sbjct: 29032 ttattgttatagtattacttcttattat 29059
>emb|AL360174.7| Human DNA sequence from clone RP3-465D4 on chromosome Xq23, complete sequence Length = 74918 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 6464 ttctttatttttatttttat 6445
>emb|AL358176.22| Human DNA sequence from clone RP11-467I20 on chromosome 1 Contains the gene for protein related to DAN and cerberus (FLJ21195), two novel genes, a pseudogene similar to part of cytochrome c oxidase I (MTCOI1), a ribosomal protein S11 (RPS11) pseudogene, a ferredoxin pseudogene and a CpG island, complete sequence Length = 184311 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ttctttatttttatttttat 113 |||||||||||||||||||| Sbjct: 148290 ttctttatttttatttttat 148271 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9,019,400 Number of Sequences: 3902068 Number of extensions: 9019400 Number of successful extensions: 370603 Number of sequences better than 10.0: 530 Number of HSP's better than 10.0 without gapping: 534 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 365145 Number of HSP's gapped (non-prelim): 5448 length of query: 424 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 402 effective length of database: 17,147,199,772 effective search space: 6893174308344 effective search space used: 6893174308344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
