ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd27n09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X69422.1|AFTETUBI A.fatua mRNA for tetraubiquitin Length = 1196 Score = 549 bits (277), Expect = e-153 Identities = 387/422 (91%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| | Sbjct: 31 agatgcagatctttgtgaagaccctcactggcaagaccatcacacttgaggtcgagtctt 90 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 ||||||| || ||||| |||||||| ||||||||||||||||| |||||||| ||||| | Sbjct: 91 ctgacaccattgacaatgtcaaggcaaagatccaggacaaggaaggcatccctccggatc 150 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 151 agcagcgcctcatatttgctggcaagcaactagaggacggccgcacccttgctgactaca 210 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 ||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||| Sbjct: 211 acatccagaaggagtccaccctccacctggtgctccgcctccgcggtggcatgcagatct 270 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 |||| |||||||||||||||||||||||||||||||||| |||||| || |||||||| | Sbjct: 271 tcgtcaagaccctcaccggcaagaccatcaccctggaggttgagtcgtctgacaccattg 330 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 |||| || ||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 331 acaatgtgaaggccaagatccaggacaaggagggcattcccccggaccagcagc-gcctg 389 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| | || ||||||||||| |||||||| |||||||| | ||||||||||||||| Sbjct: 390 atctttg-ctggtaagcagcttgaggatggccgcacccttgcggactacaacatccagaa 448 Query: 659 gg 660 || Sbjct: 449 gg 450 Score = 484 bits (244), Expect = e-133 Identities = 377/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| || |||||||||||||| ||||||||||| || Sbjct: 489 atgcagatcttcgtcaagaccctcactggtaagaccatcaccctggaggttgagtcttca 548 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| || ||||||||||||||||||||||| |||||||| || |||||| Sbjct: 549 gacacaatcgacaatgtgaaggcgaagatccaggacaaggaaggcatccctccagaccag 608 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||||||||| ||||| ||||||||||||||||| || || ||||||||| Sbjct: 609 cagcgtctcatctttgctggaaagcaacttgaggacggccgcactctcgccgactacaac 668 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 669 atccagaaggagtccaccctccacctggtgctccgcctccgtggtggcatgcagatcttc 728 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||||||||||||| | |||| |||||| || |||||||| ||| Sbjct: 729 gtcaagaccctcactggcaagaccatcaccttagaggttgagtcgtctgacaccattgac 788 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 789 aatgtgaaggccaagatccaggacaaggagggcatccccccggaccagcagc-gcctcat 847 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| |||||||| | ||||||||||||||||| Sbjct: 848 ctttgcc-ggcaagcagctcgaggatggccgcacccttgccgactacaacatccagaagg 906 Score = 474 bits (239), Expect = e-130 Identities = 376/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 261 atgcagatcttcgtcaagaccctcaccggcaagaccatcaccctggaggttgagtcgtct 320 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| || ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 321 gacaccattgacaatgtgaaggccaagatccaggacaaggagggcattcccccggaccag 380 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||||| Sbjct: 381 cagcgcctgatctttgctggtaagcagcttgaggatggccgcacccttgcggactacaac 440 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||| |||||||||||||| | ||||| |||||||||||| Sbjct: 441 atccagaaggagtccaccctccacttggtgctccgcctccgcggtggcatgcagatcttc 500 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| || ||||||||||||||||||| ||||||||| ||||| |||||| Sbjct: 501 gtcaagaccctcactggtaagaccatcaccctggaggttgagtcttcagacacaatcgac 560 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||||||||||||||||||||| ||||| || || |||||||||| | ||||| Sbjct: 561 aatgtgaaggcgaagatccaggacaaggaaggcatccctccagaccagcagc-gtctcat 619 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | || ||||| ||||| || ||||| || || || | ||||||||||||||||| Sbjct: 620 ctttg-ctggaaagcaacttgaggacggccgcactctcgccgactacaacatccagaagg 678 Score = 299 bits (151), Expect = 8e-78 Identities = 199/215 (92%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||||||||||||| | ||||||||||| ||| Sbjct: 717 atgcagatcttcgtcaagaccctcactggcaagaccatcaccttagaggttgagtcgtct 776 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| || ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 777 gacaccattgacaatgtgaaggccaagatccaggacaaggagggcatccccccggaccag 836 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||| Sbjct: 837 cagcgcctcatctttgccggcaagcagctcgaggatggccgcacccttgccgactacaac 896 Query: 421 atccagaaggagtccaccctccacctggtgctccg 455 |||||||||||||||||||| |||||||||||||| Sbjct: 897 atccagaaggagtccacccttcacctggtgctccg 931
>gb|AF148448.1|AF148448 Sporobolus stapfianus polyubiquitin mRNA, complete cds Length = 1423 Score = 527 bits (266), Expect = e-146 Identities = 384/422 (90%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 64 agatgcagatcttcgtaaagaccctcaccggcaagaccatcaccctcgaggttgagtcct 123 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 | || || || |||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 124 cggataccattgacaacgtcaaggcaaagatccaggacaaggagggaatccccccggacc 183 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| |||||||| ||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 184 agcagcgtctcatcttcgctgggaagcagcttgaggacggccgtacccttgctgattaca 243 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||||||||||||||| || ||| | |||||||| || |||||||||| Sbjct: 244 acatccagaaggagtccaccctccaccttgtcctcaggctcaggggaggcatgcagatct 303 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 ||||||||||||||||||||||||||||||| || |||| ||||| ||||||||||||| Sbjct: 304 tcgtgaagaccctcaccggcaagaccatcacgcttgaggtggagtcctcggacaccatcg 363 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 364 acaacgtgaaggccaagatccaggacaaggagggcattcccccggaccagcagcgtc-tc 422 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || || | ||| ||||||||||| || ||||| |||||||||| ||||||||||||||| Sbjct: 423 atcttcgctggg-aagcagcttgaggacggccgtacccttgctgactacaacatccagaa 481 Query: 659 gg 660 || Sbjct: 482 gg 483 Score = 521 bits (263), Expect = e-144 Identities = 382/420 (90%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 522 atgcagatcttcgtgaagaccctcaccggcaagaccatcacgcttgaggtggagtcctcg 581 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||| ||||| ||||||||||||||||| |||||||| ||||||||| Sbjct: 582 gacaccatcgacaacgtgaaggccaagatccaggacaaggaaggcatccctccggaccag 641 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| ||||| |||||||||||||||||||| ||||||||||| |||||| Sbjct: 642 cagcgtctcatcttcgctgggaagcagcttgaggacggccgtacccttgctgattacaac 701 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || ||| | ||||||||||| ||||||||||| Sbjct: 702 atccagaaggagtccaccctccaccttgtcctcaggctcaggggtggcatgcagatcttt 761 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||| Sbjct: 762 gtgaagaccctcaccggcaagaccatcacccttgaggtggagtcctcggacaccatcgac 821 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| | |||| Sbjct: 822 aacgtgaaggccaagatccaggacaaggagggcatccccccggaccagcagcgtc-tcat 880 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | |||||||||||||| |||||||| ||||| || | ||||||||||||||||| Sbjct: 881 cttcg-ctggcaagcagcttgaggatggccgcaccctcgccgactacaacatccagaagg 939 Score = 515 bits (260), Expect = e-143 Identities = 381/420 (90%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 294 atgcagatcttcgtgaagaccctcaccggcaagaccatcacgcttgaggtggagtcctcg 353 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||| ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 354 gacaccatcgacaacgtgaaggccaagatccaggacaaggagggcattcccccggaccag 413 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 414 cagcgtctcatcttcgctgggaagcagcttgaggacggccgtacccttgctgactacaac 473 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||||||||||||||||||||| || | ||||||||||| |||||||||||| Sbjct: 474 atccagaaggagtccaccctccacctggtcctgaggctcaggggtggcatgcagatcttc 533 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||||||||||||||||||||| || |||| ||||| ||||||||||||||| Sbjct: 534 gtgaagaccctcaccggcaagaccatcacgcttgaggtggagtcctcggacaccatcgac 593 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||| || ||||||||||||| | ||||| Sbjct: 594 aacgtgaaggccaagatccaggacaaggaaggcatccctccggaccagcagc-gtctcat 652 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | ||| ||||||||||| || ||||| |||||||||| |||||||||||||||| Sbjct: 653 cttcgctggg-aagcagcttgaggacggccgtacccttgctgattacaacatccagaagg 711 Score = 492 bits (248), Expect = e-135 Identities = 396/444 (89%), Gaps = 2/444 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 750 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggtggagtcctcg 809 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 810 gacaccatcgacaacgtgaaggccaagatccaggacaaggagggcatccccccggaccag 869 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| |||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 870 cagcgtctcatcttcgctggcaagcagcttgaggatggccgcaccctcgccgactacaac 929 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || | ||||||||||| |||||||| || Sbjct: 930 atccagaaggagtccaccctccacctcgtcctgaggctcaggggtggcatgcagattttt 989 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| |||||||||||||||||||||| ||||| || |||||||||||| Sbjct: 990 gtcaagaccctcactggcaagaccatcaccctggaggtggagtcatctgacaccatcgac 1049 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||||||||| || |||||||||||||| | | || Sbjct: 1050 aatgttaaggcaaagatccaggacaaggagggcatcccgccggaccagcagcgtc-tgat 1108 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| || | |||||||||||||||| Sbjct: 1109 ctttg-ctggcaagcagctggaggatggccgcaccctggcggattacaacatccagaagg 1167 Query: 661 ggtcacccctgcccctggngcttc 684 ||| |||| | ||||| ||||| Sbjct: 1168 agtccaccctccacctggtgcttc 1191 Score = 44.1 bits (22), Expect = 0.73 Identities = 25/26 (96%) Strand = Plus / Plus Query: 721 accctcactggcaagaacatcaccct 746 |||||||||||||||| ||||||||| Sbjct: 996 accctcactggcaagaccatcaccct 1021
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 517 bits (261), Expect = e-143 Identities = 383/422 (90%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 28018930 agatgcagatctttgtgaagaccctcaccggcaagaccatcaccctcgaggttgagtcct 28018989 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 | ||||| || ||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 28018990 cggacaccattgacaatgtcaaggccaagatccaggacaaggagggcatccccccggacc 28019049 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||| Sbjct: 28019050 agcagcgtctcatctttgctggcaagcagcttgaggatggccgcaccctggccgactaca 28019109 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||||||||||||||| |||||| | |||||||| || |||||||||| Sbjct: 28019110 acatccagaaggagtccaccctccaccttgtgctcaggctcaggggaggcatgcagatct 28019169 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 |||| |||||| | || ||||||||||||||||| |||| ||||| || |||||||| | Sbjct: 28019170 tcgtcaagaccttgactggcaagaccatcacccttgaggtcgagtcgtctgacaccattg 28019229 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 |||| |||||||| ||||||||||||||||||||||| |||||||||||||||| | ||| Sbjct: 28019230 acaatgtcaaggccaagatccaggacaaggagggcatccccccggaccagcagc-gtctc 28019288 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || || | | |||||||||||||| |||||||| ||||| || | ||||||||||||||| Sbjct: 28019289 atcttcg-ctggcaagcagcttgaggatggccgcaccctggccgactacaacatccagaa 28019347 Query: 659 gg 660 || Sbjct: 28019348 gg 28019349 Score = 507 bits (256), Expect = e-140 Identities = 380/420 (90%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||| || |||||||||||||| |||||||| |||||||| Sbjct: 28019844 atgcagatcttcgtcaagaccctgactggcaagaccatcacacttgaggtcgagtcctcg 28019903 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 28019904 gacacgatcgacaatgtgaaggccaagatccaggacaaggagggcatccccccggaccag 28019963 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| |||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 28019964 cagcgtctcatcttcgctggcaagcagctggaggacggccgcacccttgccgactacaac 28020023 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||| Sbjct: 28020024 atccagaaggagtccaccctccaccttgtgctcaggctcaggggtggtatgcagatcttc 28020083 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| ||||||||||||||||| || |||| ||||| |||||||| |||||| Sbjct: 28020084 gtcaagaccctgaccggcaagaccatcacgcttgaggtcgagtcctcggacacgatcgac 28020143 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| |||||||||||||||||||| || |||||||||||||||| ||||||| Sbjct: 28020144 aacgtgaaggccaagatccaggacaaggagggtatccccccggaccagcagc-gcctcat 28020202 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| ||| | |||| ||||||||||||||||| Sbjct: 28020203 cttcgcc-ggcaagcagctggaggatggccgcaccttggctgactacaacatccagaagg 28020261 Score = 484 bits (244), Expect = e-133 Identities = 377/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||| | || ||||||||||||||||||||||| ||||| ||| Sbjct: 28019388 atgcagatcttcgtcaagaccttgactggcaagaccatcacccttgaggtcgagtcgtct 28019447 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 28019448 gacaccattgacaatgtcaaggccaagatccaggacaaggagggcatccccccagaccag 28019507 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 28019508 cagcgtctcatcttcgccggcaagcagctggaggatggccgcacccttgctgactacaac 28019567 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| |||||| | |||||||| ||||||||||||||| Sbjct: 28019568 atccagaaggagtccaccctccaccttgtgctcaggctcaggggaggtatgcagatcttc 28019627 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| |||||||||||||||||||| |||| ||||| |||||||| |||||| Sbjct: 28019628 gtcaagaccctgaccggcaagaccatcaccctcgaggtcgagtcctcggacacgatcgac 28019687 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||||||||| |||||||||||||||| | ||||| Sbjct: 28019688 aacgtgaaggccaagatccaggacaaggagggcatccccccggaccagcagc-gtctcat 28019746 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || || ||||| |||||||| | ||||||||||||||||| Sbjct: 28019747 cttcgcc-ggcaagcagctggaggacggccgcacccttgccgactacaacatccagaagg 28019805 Score = 482 bits (243), Expect = e-132 Identities = 377/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 28020072 atgcagatcttcgtcaagaccctgaccggcaagaccatcacgcttgaggtcgagtcctcg 28020131 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 28020132 gacacgatcgacaacgtgaaggccaagatccaggacaaggagggtatccccccggaccag 28020191 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| || ||||||||||| ||||| ||||||||| | |||||||||||| Sbjct: 28020192 cagcgcctcatcttcgccggcaagcagctggaggatggccgcaccttggctgactacaac 28020251 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| ||| | ||||||||||| |||||||||||| Sbjct: 28020252 atccagaaggagtccacccttcacctggttctcaggctcaggggtgggatgcagatcttc 28020311 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || ||||||||||| ||||| |||| |||||| || ||||| || ||| Sbjct: 28020312 gtgaagaccctgactggcaagaccattacccttgaggttgagtcgtccgacactattgac 28020371 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||||||||||||||||||||||||||| |||||||||||||||| | || || Sbjct: 28020372 aacgtgaaggcgaagatccaggacaaggagggcatccccccggaccagcagc-gtctgat 28020430 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | || ||||||||||| |||||||| |||||||| | |||||||||||||||| Sbjct: 28020431 ctttg-ctggtaagcagcttgaggatggccgcacccttgcggattacaacatccagaagg 28020489 Score = 474 bits (239), Expect = e-130 Identities = 376/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 28019616 atgcagatcttcgtcaagaccctgaccggcaagaccatcaccctcgaggtcgagtcctcg 28019675 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 28019676 gacacgatcgacaacgtgaaggccaagatccaggacaaggagggcatccccccggaccag 28019735 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 28019736 cagcgtctcatcttcgccggcaagcagctggaggacggccgcacccttgccgactacaac 28019795 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||| |||||||||||||| ||||| | |||||||| ||||||||||||||| Sbjct: 28019796 atccagaaggaatccaccctccaccttgtgcttaggctcaggggaggtatgcagatcttc 28019855 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| || |||||||||||||| || |||| ||||| |||||||| |||||| Sbjct: 28019856 gtcaagaccctgactggcaagaccatcacacttgaggtcgagtcctcggacacgatcgac 28019915 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||||||||| |||||||||||||||| | ||||| Sbjct: 28019916 aatgtgaaggccaagatccaggacaaggagggcatccccccggaccagcagc-gtctcat 28019974 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || || ||||| |||||||| | ||||||||||||||||| Sbjct: 28019975 cttcg-ctggcaagcagctggaggacggccgcacccttgccgactacaacatccagaagg 28020033 Score = 460 bits (232), Expect = e-126 Identities = 374/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||| | || ||||||||||||||||||||||| ||||| ||| Sbjct: 28019160 atgcagatcttcgtcaagaccttgactggcaagaccatcacccttgaggtcgagtcgtct 28019219 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 28019220 gacaccattgacaatgtcaaggccaagatccaggacaaggagggcatccccccggaccag 28019279 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| |||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 28019280 cagcgtctcatcttcgctggcaagcagcttgaggatggccgcaccctggccgactacaac 28019339 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||||||||| |||||| | |||||||| || |||||||||||| Sbjct: 28019340 atccagaaggagtctaccctccaccttgtgctcaggctcaggggaggcatgcagatcttc 28019399 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||| | || ||||||||||||||||| |||| ||||| || |||||||| ||| Sbjct: 28019400 gtcaagaccttgactggcaagaccatcacccttgaggtcgagtcgtctgacaccattgac 28019459 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| |||||||||| | ||||| Sbjct: 28019460 aatgtcaaggccaagatccaggacaaggagggcatccccccagaccagcagc-gtctcat 28019518 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| |||||||||| ||||||||||||||||| Sbjct: 28019519 cttcgcc-ggcaagcagctggaggatggccgcacccttgctgactacaacatccagaagg 28019577 Score = 375 bits (189), Expect = e-100 Identities = 365/422 (86%), Gaps = 2/422 (0%) Strand = Plus / Minus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| Sbjct: 27575676 agatgcagatctttgtgaagacactcactggcaagaccatcaccctcgaggttgagtcct 27575617 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 |||| || || ||||| || ||||| ||||| ||||||||||||||||| || || |||| Sbjct: 27575616 ctgatacaattgacaatgtgaaggccaagattcaggacaaggagggcattccacctgacc 27575557 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 |||| || |||||||||||||||||||| || ||||| ||||||||||| || || |||| Sbjct: 27575556 agcaacgtctcatctttgctggcaagcaactagaggatggccgcaccctcgcggattaca 27575497 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||||||||||||||| || || ||||||||||| || |||||||||| Sbjct: 27575496 acatccagaaggagtccaccctccaccttgtccttcgcctcaggggaggcatgcagatct 27575437 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | ||||||||| | || || ||||||||||| || | || ||||| ||||||| |||| Sbjct: 27575436 ttgtgaagaccttgacaggaaagaccatcactcttgcggtcgagtcctcggacaagatcg 27575377 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 |||| || ||||||||||| |||||||||||||| ||||||||||||||||||| ||||| Sbjct: 27575376 acaatgtgaaggcgaagattcaggacaaggagggaattcccccggaccagcagc-gcctc 27575318 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| | | ||||||||| || ||||| || || || |||| |||||||| ||||| Sbjct: 27575317 atctttg-cagacaagcagctcgaggatggacgtacactggctgattacaacattcagaa 27575259 Query: 659 gg 660 || Sbjct: 27575258 gg 27575257 Score = 309 bits (156), Expect = 8e-81 Identities = 204/220 (92%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 28020299 gatgcagatcttcgtgaagaccctgactggcaagaccattacccttgaggttgagtcgtc 28020358 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 28020359 cgacactattgacaacgtgaaggcgaagatccaggacaaggagggcatccccccggacca 28020418 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||||| || ||||||||||| |||||||||||||| |||||||||||||| || ||||| Sbjct: 28020419 gcagcgtctgatctttgctggtaagcagcttgaggatggccgcacccttgcggattacaa 28020478 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctc 459 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 28020479 catccagaaggagtccacactccacctggtgctccgcctc 28020518 Score = 228 bits (115), Expect = 2e-56 Identities = 193/219 (88%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||| | || || ||||||||||| |||| ||| |||||||| Sbjct: 27575446 atgcagatctttgtgaagaccttgacaggaaagaccatcactcttgcggtcgagtcctcg 27575387 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||| ||||||||| || ||||||||||| |||||||||||||| || |||||||||||| Sbjct: 27575386 gacaagatcgacaatgtgaaggcgaagattcaggacaaggagggaattcccccggaccag 27575327 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||||||||||||||| | ||||||||| ||||| || || || || ||||| |||||| Sbjct: 27575326 cagcgcctcatctttgcagacaagcagctcgaggatggacgtacactggctgattacaac 27575267 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctc 459 || ||||||||||||||| | |||||||||||||||||| Sbjct: 27575266 attcagaaggagtccaccttgcacctggtgctccgcctc 27575228 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 466 ggtatgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtct 525 ||||||||||||||||||||||| || || || ||||||||||| || |||| ||| Sbjct: 26202050 ggtatgcagatcttcgtgaagacgctgacggggaagaccatcactctcgaggtcgagagc 26202109 Query: 526 tcggacaccatcgacaacgtcaaggcgaagatccagg 562 |||||||||||||| |||||||| |||||||||| Sbjct: 26202110 agcgacaccatcgacaatgtcaaggccaagatccagg 26202146 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||| || || || ||||||||||| || ||||| ||| | Sbjct: 26202053 atgcagatcttcgtgaagacgctgacggggaagaccatcactctcgaggtcgagagcagc 26202112 Query: 301 gacacgatcgacaacgtcaaggcgaagatccagg 334 ||||| |||||||| |||||||| |||||||||| Sbjct: 26202113 gacaccatcgacaatgtcaaggccaagatccagg 26202146
>gb|AF184279.1|AF184279 Oryza sativa polyubiquitin (RUBQ1) gene, complete cds Length = 3184 Score = 517 bits (261), Expect = e-143 Identities = 383/422 (90%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1700 agatgcagatctttgtgaagaccctcaccggcaagaccatcaccctcgaggttgagtcct 1759 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 | ||||| || ||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1760 cggacaccattgacaatgtcaaggccaagatccaggacaaggagggcatccccccggacc 1819 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| |||||||| |||||||||||||||||||| ||||||||||| || ||||||| Sbjct: 1820 agcagcgtctcatcttcgctggcaagcagcttgaggatggccgcaccctggccgactaca 1879 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||||||||||||||| |||||| | |||||||| || |||||||||| Sbjct: 1880 acatccagaaggagtccaccctccaccttgtgctcaggctcaggggaggcatgcagatct 1939 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 |||| |||||| | || ||||||||||||||||| |||| ||||| || |||||||| | Sbjct: 1940 tcgtcaagaccttgactggcaagaccatcacccttgaggtcgagtcgtctgacaccattg 1999 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 |||| |||||||| ||||||||||||||||||||||| |||||||||||||||| | ||| Sbjct: 2000 acaatgtcaaggccaagatccaggacaaggagggcatccccccggaccagcagc-gtctc 2058 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || || | | |||||||||||||| |||||||| ||||| |||| ||||||||||||||| Sbjct: 2059 atcttcg-ctggcaagcagcttgaggatggccgcaccctggctgactacaacatccagaa 2117 Query: 659 gg 660 || Sbjct: 2118 gg 2119 Score = 500 bits (252), Expect = e-138 Identities = 379/420 (90%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 2386 atgcagatcttcgtcaagaccctgaccggcaagaccatcaccctcgaggtcgagtcctcg 2445 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||||||||| || || || |||||||||||||||||||||||||||||||||||| Sbjct: 2446 gacacgatcgacaatgtgaaagccaagatccaggacaaggagggcatccccccggaccag 2505 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| Sbjct: 2506 cagcgtctcatctttgctggcaagcagctggaggatggccgcacccttgccgactacaac 2565 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||| Sbjct: 2566 atccagaaggagtccaccctccaccttgtgctcaggctcaggggtggtatgcagatcttc 2625 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| ||||||||||||||||| || |||| ||||| |||||||| |||||| Sbjct: 2626 gtcaagaccctgaccggcaagaccatcacgcttgaggtcgagtcctcggacacgatcgac 2685 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||||||||||||||| || |||||||||||||||| | ||||| Sbjct: 2686 aatgtgaaggccaagatccaggacaaggagggtatccccccggaccagcagc-gtctcat 2744 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | |||||||||||||| |||||||| ||| | |||| ||||||||||||||||| Sbjct: 2745 cttcgcc-ggcaagcagcttgaggatggccgcaccttggctgactacaacatccagaagg 2803 Score = 476 bits (240), Expect = e-131 Identities = 376/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||| | || ||||||||||||||||||||||| ||||| ||| Sbjct: 1930 atgcagatcttcgtcaagaccttgactggcaagaccatcacccttgaggtcgagtcgtct 1989 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1990 gacaccattgacaatgtcaaggccaagatccaggacaaggagggcatccccccggaccag 2049 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 2050 cagcgtctcatcttcgctggcaagcagcttgaggatggccgcaccctggctgactacaac 2109 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| |||||| | |||||||| || |||||||||||| Sbjct: 2110 atccagaaggagtccaccctccaccttgtgctcaggctcaggggaggcatgcagatcttc 2169 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||| | || ||||||||||||||||| |||| ||||| || |||||||| ||| Sbjct: 2170 gtcaagaccttgactggcaagaccatcaccctcgaggtcgagtcgtctgacaccattgac 2229 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| |||||||||| | ||||| Sbjct: 2230 aatgtcaaggccaagatccaggacaaggagggcatccccccagaccagcagc-gtctcat 2288 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| |||||||||| ||||||||||||||||| Sbjct: 2289 cttcgcc-ggcaagcagctggaggatggccgcacccttgctgactacaacatccagaagg 2347 Score = 474 bits (239), Expect = e-130 Identities = 376/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||| | || ||||||||||||||||| ||||| ||||| ||| Sbjct: 2158 atgcagatcttcgtcaagaccttgactggcaagaccatcaccctcgaggtcgagtcgtct 2217 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 2218 gacaccattgacaatgtcaaggccaagatccaggacaaggagggcatccccccagaccag 2277 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 2278 cagcgtctcatcttcgccggcaagcagctggaggatggccgcacccttgctgactacaac 2337 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| |||||| | |||||||| ||||||||||||||| Sbjct: 2338 atccagaaggagtccaccctccaccttgtgctcaggctcaggggaggtatgcagatcttc 2397 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| |||||||||||||||||||| |||| ||||| |||||||| |||||| Sbjct: 2398 gtcaagaccctgaccggcaagaccatcaccctcgaggtcgagtcctcggacacgatcgac 2457 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || || || ||||||||||||||||||||||| |||||||||||||||| | ||||| Sbjct: 2458 aatgtgaaagccaagatccaggacaaggagggcatccccccggaccagcagc-gtctcat 2516 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| |||||||| | ||||||||||||||||| Sbjct: 2517 ctttg-ctggcaagcagctggaggatggccgcacccttgccgactacaacatccagaagg 2575 Score = 458 bits (231), Expect = e-125 Identities = 374/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 2614 atgcagatcttcgtcaagaccctgaccggcaagaccatcacgcttgaggtcgagtcctcg 2673 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||||||||| || ||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 2674 gacacgatcgacaatgtgaaggccaagatccaggacaaggagggtatccccccggaccag 2733 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||||||||| ||||||||| | |||||||||||| Sbjct: 2734 cagcgtctcatcttcgccggcaagcagcttgaggatggccgcaccttggctgactacaac 2793 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| ||| | ||||||||||| |||||||||||| Sbjct: 2794 atccagaaggagtccacccttcacctggttctcaggctcaggggtgggatgcagatcttc 2853 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || ||||||||||| ||||| |||| |||||| || ||||| || ||| Sbjct: 2854 gtgaagaccctgactggcaagaccattacccttgaggttgagtcgtccgacactattgac 2913 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||||||||||||||||||||||||||| |||||||||||||||| | || || Sbjct: 2914 aacgtgaaggcgaagatccaggacaaggagggcatccccccggaccagcagc-gtctgat 2972 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | || ||||||||||| |||||||| ||| | || | |||||||||||||||| Sbjct: 2973 ctttg-ctggtaagcagcttgaggatggccgcaccttggcggattacaacatccagaagg 3031 Score = 278 bits (140), Expect = 3e-71 Identities = 200/220 (90%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 2841 gatgcagatcttcgtgaagaccctgactggcaagaccattacccttgaggttgagtcgtc 2900 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2901 cgacactattgacaacgtgaaggcgaagatccaggacaaggagggcatccccccggacca 2960 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||||| || ||||||||||| |||||||||||||| ||||||||| | || || ||||| Sbjct: 2961 gcagcgtctgatctttgctggtaagcagcttgaggatggccgcaccttggcggattacaa 3020 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctc 459 |||||||||||||||||| ||||||||||| || |||||| Sbjct: 3021 catccagaaggagtccacactccacctggttctgcgcctc 3060
>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0547F09 Length = 140615 Score = 517 bits (261), Expect = e-143 Identities = 383/422 (90%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 63749 agatgcagatctttgtgaagaccctcaccggcaagaccatcaccctcgaggttgagtcct 63808 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 | ||||| || ||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 63809 cggacaccattgacaatgtcaaggccaagatccaggacaaggagggcatccccccggacc 63868 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||| Sbjct: 63869 agcagcgtctcatctttgctggcaagcagcttgaggatggccgcaccctggccgactaca 63928 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||||||||||||||| |||||| | |||||||| || |||||||||| Sbjct: 63929 acatccagaaggagtccaccctccaccttgtgctcaggctcaggggaggcatgcagatct 63988 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 |||| |||||| | || ||||||||||||||||| |||| ||||| || |||||||| | Sbjct: 63989 tcgtcaagaccttgactggcaagaccatcacccttgaggtcgagtcgtctgacaccattg 64048 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 |||| |||||||| ||||||||||||||||||||||| |||||||||||||||| | ||| Sbjct: 64049 acaatgtcaaggccaagatccaggacaaggagggcatccccccggaccagcagc-gtctc 64107 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || || | | |||||||||||||| |||||||| ||||| || | ||||||||||||||| Sbjct: 64108 atcttcg-ctggcaagcagcttgaggatggccgcaccctggccgactacaacatccagaa 64166 Query: 659 gg 660 || Sbjct: 64167 gg 64168 Score = 507 bits (256), Expect = e-140 Identities = 380/420 (90%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||| || |||||||||||||| |||||||| |||||||| Sbjct: 64663 atgcagatcttcgtcaagaccctgactggcaagaccatcacacttgaggtcgagtcctcg 64722 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 64723 gacacgatcgacaatgtgaaggccaagatccaggacaaggagggcatccccccggaccag 64782 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| |||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 64783 cagcgtctcatcttcgctggcaagcagctggaggacggccgcacccttgccgactacaac 64842 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||| Sbjct: 64843 atccagaaggagtccaccctccaccttgtgctcaggctcaggggtggtatgcagatcttc 64902 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| ||||||||||||||||| || |||| ||||| |||||||| |||||| Sbjct: 64903 gtcaagaccctgaccggcaagaccatcacgcttgaggtcgagtcctcggacacgatcgac 64962 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| |||||||||||||||||||| || |||||||||||||||| ||||||| Sbjct: 64963 aacgtgaaggccaagatccaggacaaggagggtatccccccggaccagcagc-gcctcat 65021 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| ||| | |||| ||||||||||||||||| Sbjct: 65022 cttcgcc-ggcaagcagctggaggatggccgcaccttggctgactacaacatccagaagg 65080 Score = 484 bits (244), Expect = e-133 Identities = 377/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||| | || ||||||||||||||||||||||| ||||| ||| Sbjct: 64207 atgcagatcttcgtcaagaccttgactggcaagaccatcacccttgaggtcgagtcgtct 64266 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 64267 gacaccattgacaatgtcaaggccaagatccaggacaaggagggcatccccccagaccag 64326 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 64327 cagcgtctcatcttcgccggcaagcagctggaggatggccgcacccttgctgactacaac 64386 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| |||||| | |||||||| ||||||||||||||| Sbjct: 64387 atccagaaggagtccaccctccaccttgtgctcaggctcaggggaggtatgcagatcttc 64446 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| |||||||||||||||||||| |||| ||||| |||||||| |||||| Sbjct: 64447 gtcaagaccctgaccggcaagaccatcaccctcgaggtcgagtcctcggacacgatcgac 64506 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||||||||| |||||||||||||||| | ||||| Sbjct: 64507 aacgtgaaggccaagatccaggacaaggagggcatccccccggaccagcagc-gtctcat 64565 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || || ||||| |||||||| | ||||||||||||||||| Sbjct: 64566 cttcgcc-ggcaagcagctggaggacggccgcacccttgccgactacaacatccagaagg 64624 Score = 482 bits (243), Expect = e-132 Identities = 377/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 64891 atgcagatcttcgtcaagaccctgaccggcaagaccatcacgcttgaggtcgagtcctcg 64950 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 64951 gacacgatcgacaacgtgaaggccaagatccaggacaaggagggtatccccccggaccag 65010 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| || ||||||||||| ||||| ||||||||| | |||||||||||| Sbjct: 65011 cagcgcctcatcttcgccggcaagcagctggaggatggccgcaccttggctgactacaac 65070 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| ||| | ||||||||||| |||||||||||| Sbjct: 65071 atccagaaggagtccacccttcacctggttctcaggctcaggggtgggatgcagatcttc 65130 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || ||||||||||| ||||| |||| |||||| || ||||| || ||| Sbjct: 65131 gtgaagaccctgactggcaagaccattacccttgaggttgagtcgtccgacactattgac 65190 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||||||||||||||||||||||||||| |||||||||||||||| | || || Sbjct: 65191 aacgtgaaggcgaagatccaggacaaggagggcatccccccggaccagcagc-gtctgat 65249 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | || ||||||||||| |||||||| |||||||| | |||||||||||||||| Sbjct: 65250 ctttg-ctggtaagcagcttgaggatggccgcacccttgcggattacaacatccagaagg 65308 Score = 474 bits (239), Expect = e-130 Identities = 376/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 64435 atgcagatcttcgtcaagaccctgaccggcaagaccatcaccctcgaggtcgagtcctcg 64494 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 64495 gacacgatcgacaacgtgaaggccaagatccaggacaaggagggcatccccccggaccag 64554 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 64555 cagcgtctcatcttcgccggcaagcagctggaggacggccgcacccttgccgactacaac 64614 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||| |||||||||||||| ||||| | |||||||| ||||||||||||||| Sbjct: 64615 atccagaaggaatccaccctccaccttgtgcttaggctcaggggaggtatgcagatcttc 64674 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| || |||||||||||||| || |||| ||||| |||||||| |||||| Sbjct: 64675 gtcaagaccctgactggcaagaccatcacacttgaggtcgagtcctcggacacgatcgac 64734 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||||||||| |||||||||||||||| | ||||| Sbjct: 64735 aatgtgaaggccaagatccaggacaaggagggcatccccccggaccagcagc-gtctcat 64793 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || || ||||| |||||||| | ||||||||||||||||| Sbjct: 64794 cttcg-ctggcaagcagctggaggacggccgcacccttgccgactacaacatccagaagg 64852 Score = 460 bits (232), Expect = e-126 Identities = 374/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||| | || ||||||||||||||||||||||| ||||| ||| Sbjct: 63979 atgcagatcttcgtcaagaccttgactggcaagaccatcacccttgaggtcgagtcgtct 64038 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 64039 gacaccattgacaatgtcaaggccaagatccaggacaaggagggcatccccccggaccag 64098 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| |||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 64099 cagcgtctcatcttcgctggcaagcagcttgaggatggccgcaccctggccgactacaac 64158 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||||||||| |||||| | |||||||| || |||||||||||| Sbjct: 64159 atccagaaggagtctaccctccaccttgtgctcaggctcaggggaggcatgcagatcttc 64218 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||| | || ||||||||||||||||| |||| ||||| || |||||||| ||| Sbjct: 64219 gtcaagaccttgactggcaagaccatcacccttgaggtcgagtcgtctgacaccattgac 64278 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| |||||||||| | ||||| Sbjct: 64279 aatgtcaaggccaagatccaggacaaggagggcatccccccagaccagcagc-gtctcat 64337 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| |||||||||| ||||||||||||||||| Sbjct: 64338 cttcgcc-ggcaagcagctggaggatggccgcacccttgctgactacaacatccagaagg 64396 Score = 309 bits (156), Expect = 8e-81 Identities = 204/220 (92%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 65118 gatgcagatcttcgtgaagaccctgactggcaagaccattacccttgaggttgagtcgtc 65177 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 65178 cgacactattgacaacgtgaaggcgaagatccaggacaaggagggcatccccccggacca 65237 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||||| || ||||||||||| |||||||||||||| |||||||||||||| || ||||| Sbjct: 65238 gcagcgtctgatctttgctggtaagcagcttgaggatggccgcacccttgcggattacaa 65297 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctc 459 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 65298 catccagaaggagtccacactccacctggtgctccgcctc 65337
>dbj|AK121590.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037P03, full insert sequence Length = 1983 Score = 517 bits (261), Expect = e-143 Identities = 383/422 (90%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 70 agatgcagatctttgtgaagaccctcaccggcaagaccatcaccctcgaggttgagtcct 129 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 | ||||| || ||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 130 cggacaccattgacaatgtcaaggccaagatccaggacaaggagggcatccccccggacc 189 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||| Sbjct: 190 agcagcgtctcatctttgctggcaagcagcttgaggatggccgcaccctggccgactaca 249 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||||||||||||||| |||||| | |||||||| || |||||||||| Sbjct: 250 acatccagaaggagtccaccctccaccttgtgctcaggctcaggggaggcatgcagatct 309 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 |||| |||||| | || ||||||||||||||||| |||| ||||| || |||||||| | Sbjct: 310 tcgtcaagaccttgactggcaagaccatcacccttgaggtcgagtcgtctgacaccattg 369 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 |||| |||||||| ||||||||||||||||||||||| |||||||||||||||| | ||| Sbjct: 370 acaatgtcaaggccaagatccaggacaaggagggcatccccccggaccagcagc-gtctc 428 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || || | | |||||||||||||| |||||||| ||||| || | ||||||||||||||| Sbjct: 429 atcttcg-ctggcaagcagcttgaggatggccgcaccctggccgactacaacatccagaa 487 Query: 659 gg 660 || Sbjct: 488 gg 489 Score = 500 bits (252), Expect = e-138 Identities = 379/420 (90%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||| || |||||||||||||| |||||||| |||||||| Sbjct: 984 atgcagatcttcgtcaagaccctgactggcaagaccatcacacttgaggtcgagtcctcg 1043 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1044 gacacgatcgacaatgtgaaggccaagatccaggacaaggagggcatccccccggaccag 1103 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| |||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 1104 cagcgtctcatcttcgctggcaagcagctggaggacggccgcacccttgccgactacaac 1163 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||| Sbjct: 1164 gtccagaaggagtccaccctccaccttgtgctcaggctcaggggtggtatgcagatcttc 1223 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| ||||||||||||||||| || |||| ||||| |||||||| |||||| Sbjct: 1224 gtcaagaccctgaccggcaagaccatcacgcttgaggtcgagtcctcggacacgatcgac 1283 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| |||||||||||||||||||| || |||||||||||||||| ||||||| Sbjct: 1284 aacgtgaaggccaagatccaggacaaggagggtatccccccggaccagcagc-gcctcat 1342 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| ||| | |||| ||||||||||||||||| Sbjct: 1343 cttcgcc-ggcaagcagctggaggatggccgcaccttggctgactacaacatccagaagg 1401 Score = 484 bits (244), Expect = e-133 Identities = 377/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||| | || ||||||||||||||||||||||| ||||| ||| Sbjct: 528 atgcagatcttcgtcaagaccttgactggcaagaccatcacccttgaggtcgagtcgtct 587 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 588 gacaccattgacaatgtcaaggccaagatccaggacaaggagggcatccccccagaccag 647 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 648 cagcgtctcatcttcgccggcaagcagctggaggatggccgcacccttgctgactacaac 707 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| |||||| | |||||||| ||||||||||||||| Sbjct: 708 atccagaaggagtccaccctccaccttgtgctcaggctcaggggaggtatgcagatcttc 767 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| |||||||||||||||||||| |||| ||||| |||||||| |||||| Sbjct: 768 gtcaagaccctgaccggcaagaccatcaccctcgaggtcgagtcctcggacacgatcgac 827 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||||||||| |||||||||||||||| | ||||| Sbjct: 828 aacgtgaaggccaagatccaggacaaggagggcatccccccggaccagcagc-gtctcat 886 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || || ||||| |||||||| | ||||||||||||||||| Sbjct: 887 cttcgcc-ggcaagcagctggaggacggccgcacccttgccgactacaacatccagaagg 945 Score = 474 bits (239), Expect = e-130 Identities = 376/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 1212 atgcagatcttcgtcaagaccctgaccggcaagaccatcacgcttgaggtcgagtcctcg 1271 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 1272 gacacgatcgacaacgtgaaggccaagatccaggacaaggagggtatccccccggaccag 1331 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| || ||||||||||| ||||| ||||||||| | |||||||||||| Sbjct: 1332 cagcgcctcatcttcgccggcaagcagctggaggatggccgcaccttggctgactacaac 1391 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| ||| | ||||||||||| |||||||| ||| Sbjct: 1392 atccagaaggagtccacccttcacctggttctcaggctcaggggtgggatgcagatattc 1451 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || ||||||||||| ||||| |||| |||||| || ||||| || ||| Sbjct: 1452 gtgaagaccctgactggcaagaccattacccttgaggttgagtcgtccgacactattgac 1511 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||||||||||||||||||||||||||| |||||||||||||||| | || || Sbjct: 1512 aacgtgaaggcgaagatccaggacaaggagggcatccccccggaccagcagc-gtctgat 1570 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | || ||||||||||| |||||||| |||||||| | |||||||||||||||| Sbjct: 1571 ctttg-ctggtaagcagcttgaggatggccgcacccttgcggattacaacatccagaagg 1629 Score = 466 bits (235), Expect = e-128 Identities = 375/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 756 atgcagatcttcgtcaagaccctgaccggcaagaccatcaccctcgaggtcgagtcctcg 815 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 816 gacacgatcgacaacgtgaaggccaagatccaggacaaggagggcatccccccggaccag 875 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 876 cagcgtctcatcttcgccggcaagcagctggaggacggccgcacccttgccgactacaac 935 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||| |||||||||||||| ||||| | |||||||| ||||||||||||||| Sbjct: 936 atccagaaggaatccaccctccaccttgtgcttaggctcaggggaggtatgcagatcttc 995 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| || |||||||||||||| || |||| ||||| |||||||| |||||| Sbjct: 996 gtcaagaccctgactggcaagaccatcacacttgaggtcgagtcctcggacacgatcgac 1055 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||||||||| |||||||||||||||| | ||||| Sbjct: 1056 aatgtgaaggccaagatccaggacaaggagggcatccccccggaccagcagc-gtctcat 1114 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || || ||||| |||||||| | ||||||| ||||||||| Sbjct: 1115 cttcg-ctggcaagcagctggaggacggccgcacccttgccgactacaacgtccagaagg 1173 Score = 460 bits (232), Expect = e-126 Identities = 374/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||| | || ||||||||||||||||||||||| ||||| ||| Sbjct: 300 atgcagatcttcgtcaagaccttgactggcaagaccatcacccttgaggtcgagtcgtct 359 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 360 gacaccattgacaatgtcaaggccaagatccaggacaaggagggcatccccccggaccag 419 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| |||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 420 cagcgtctcatcttcgctggcaagcagcttgaggatggccgcaccctggccgactacaac 479 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||||||||| |||||| | |||||||| || |||||||||||| Sbjct: 480 atccagaaggagtctaccctccaccttgtgctcaggctcaggggaggcatgcagatcttc 539 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||| | || ||||||||||||||||| |||| ||||| || |||||||| ||| Sbjct: 540 gtcaagaccttgactggcaagaccatcacccttgaggtcgagtcgtctgacaccattgac 599 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| |||||||||| | ||||| Sbjct: 600 aatgtcaaggccaagatccaggacaaggagggcatccccccagaccagcagc-gtctcat 658 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| |||||||||| ||||||||||||||||| Sbjct: 659 cttcgcc-ggcaagcagctggaggatggccgcacccttgctgactacaacatccagaagg 717 Score = 301 bits (152), Expect = 2e-78 Identities = 203/220 (92%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 ||||||||| || ||||||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 1439 gatgcagatattcgtgaagaccctgactggcaagaccattacccttgaggttgagtcgtc 1498 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1499 cgacactattgacaacgtgaaggcgaagatccaggacaaggagggcatccccccggacca 1558 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||||| || ||||||||||| |||||||||||||| |||||||||||||| || ||||| Sbjct: 1559 gcagcgtctgatctttgctggtaagcagcttgaggatggccgcacccttgcggattacaa 1618 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctc 459 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 1619 catccagaaggagtccacactccacctggtgctccgcctc 1658
>emb|X76064.1|OSPOLUBI O.sativa rub1 mRNA for polyubiquitin Length = 1673 Score = 509 bits (257), Expect = e-141 Identities = 382/422 (90%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 43 agatgcagatctttgtgaagaccctcacgggcaagaccatcaccctcgaggttgagtcct 102 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 | ||||| || ||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 103 cggacaccattgacaatgtcaaggccaagatccaggacaaggagggcatccccccggacc 162 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| |||||||| |||||||||||||||||||| ||||||||||| || ||||||| Sbjct: 163 agcagcgtctcatcttcgctggcaagcagcttgaggatggccgcaccctggccgactaca 222 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||||||||||||||| |||||| | |||||||| || |||||||||| Sbjct: 223 acatccagaaggagtccaccctccaccttgtgctcaggctcaggggaggcatgcagatct 282 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 |||| |||||| | || ||||||||||||||||| |||| ||||| || |||||||| | Sbjct: 283 tcgtcaagaccttgactggcaagaccatcacccttgaggtcgagtcgtctgacaccattg 342 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 |||| |||||||| ||||||||||||||||||||||| |||||||||||||||| | ||| Sbjct: 343 acaatgtcaaggccaagatccaggacaaggagggcatccccccggaccagcagc-gtctc 401 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || || | | |||||||||||||| |||||||| ||||| |||| ||||||||||||||| Sbjct: 402 atcttcg-ctggcaagcagcttgaggatggccgcaccctggctgactacaacatccagaa 460 Query: 659 gg 660 || Sbjct: 461 gg 462 Score = 507 bits (256), Expect = e-140 Identities = 380/420 (90%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 729 atgcagatcttcgtcaagaccctgaccggcaagaccatcaccctcgaggtcgagtcctcg 788 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 789 gacacgatcgacaacgtgaaggccaagatccaggacaaggagggcatccccccggaccag 848 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| Sbjct: 849 cagcgtctcatctttgctggcaagcagctggaggatggccgcacccttgccgactacaac 908 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||| Sbjct: 909 atccagaaggagtccaccctccaccttgtgctcaggctcaggggtggtatgcagatcttc 968 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| ||||||||||||||||| || |||| ||||| |||||||| |||||| Sbjct: 969 gtcaagaccctgaccggcaagaccatcacgcttgaggtcgagtcctcggacacgatcgac 1028 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||||||||||||||| || |||||||||||||||| | ||||| Sbjct: 1029 aatgtgaaggccaagatccaggacaaggagggtatccccccggaccagcagc-gtctcat 1087 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| ||| | |||| ||||||||||||||||| Sbjct: 1088 cttcgcc-ggcaagcagctggaggatggccgcaccttggctgactacaacatccagaagg 1146 Score = 498 bits (251), Expect = e-137 Identities = 379/420 (90%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||| | || ||||||||||||||||||||||| ||||| ||| Sbjct: 501 atgcagatcttcgtcaagaccttgactggcaagaccatcacccttgaggtcgagtcgtct 560 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 561 gacaccattgacaatgtcaaggccaagatccaggacaaggagggcatccccccagaccag 620 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 621 cagcgtctcatcttcgccggcaagcagctggaggatggccgcacccttgctgactacaac 680 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| |||||| | |||||||| ||||||||||||||| Sbjct: 681 atccagaaggagtccaccctccaccttgtgctcaggctcaggggaggtatgcagatcttc 740 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| |||||||||||||||||||| |||| ||||| |||||||| |||||| Sbjct: 741 gtcaagaccctgaccggcaagaccatcaccctcgaggtcgagtcctcggacacgatcgac 800 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||||||||| |||||||||||||||| | ||||| Sbjct: 801 aacgtgaaggccaagatccaggacaaggagggcatccccccggaccagcagc-gtctcat 859 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| |||||||| | ||||||||||||||||| Sbjct: 860 ctttg-ctggcaagcagctggaggatggccgcacccttgccgactacaacatccagaagg 918 Score = 476 bits (240), Expect = e-131 Identities = 376/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||| | || ||||||||||||||||||||||| ||||| ||| Sbjct: 273 atgcagatcttcgtcaagaccttgactggcaagaccatcacccttgaggtcgagtcgtct 332 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 333 gacaccattgacaatgtcaaggccaagatccaggacaaggagggcatccccccggaccag 392 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 393 cagcgtctcatcttcgctggcaagcagcttgaggatggccgcaccctggctgactacaac 452 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| |||||| | |||||||| || |||||||||||| Sbjct: 453 atccagaaggagtccaccctccaccttgtgctcaggctcaggggaggcatgcagatcttc 512 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||| | || ||||||||||||||||| |||| ||||| || |||||||| ||| Sbjct: 513 gtcaagaccttgactggcaagaccatcacccttgaggtcgagtcgtctgacaccattgac 572 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| |||||||||| | ||||| Sbjct: 573 aatgtcaaggccaagatccaggacaaggagggcatccccccagaccagcagc-gtctcat 631 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| |||||||||| ||||||||||||||||| Sbjct: 632 cttcgcc-ggcaagcagctggaggatggccgcacccttgctgactacaacatccagaagg 690 Score = 450 bits (227), Expect = e-123 Identities = 373/420 (88%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 957 atgcagatcttcgtcaagaccctgaccggcaagaccatcacgcttgaggtcgagtcctcg 1016 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||||||||| || ||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 1017 gacacgatcgacaatgtgaaggccaagatccaggacaaggagggtatccccccggaccag 1076 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| ||||||||| | |||||||||||| Sbjct: 1077 cagcgtctcatcttcgccggcaagcagctggaggatggccgcaccttggctgactacaac 1136 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| ||| | ||||||||||| |||||||||||| Sbjct: 1137 atccagaaggagtccacccttcacctggttctcaggctcaggggtgggatgcagatcttc 1196 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || ||||||||||| ||||| |||| |||||| || ||||| || ||| Sbjct: 1197 gtgaagaccctgactggcaagaccattacccttgaggttgagtcgtccgacactattgac 1256 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||||||||||||||||||||||||||| |||||||||||||||| | || || Sbjct: 1257 aacgtgaaggcgaagatccaggacaaggagggcatccccccggaccagcagc-gtctgat 1315 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | || ||||||||||| |||||||| ||| | || | |||||||||||||||| Sbjct: 1316 ctttg-ctggtaagcagcttgaggatggccgcaccttggcggattacaacatccagaagg 1374 Score = 278 bits (140), Expect = 3e-71 Identities = 200/220 (90%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 1184 gatgcagatcttcgtgaagaccctgactggcaagaccattacccttgaggttgagtcgtc 1243 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1244 cgacactattgacaacgtgaaggcgaagatccaggacaaggagggcatccccccggacca 1303 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||||| || ||||||||||| |||||||||||||| ||||||||| | || || ||||| Sbjct: 1304 gcagcgtctgatctttgctggtaagcagcttgaggatggccgcaccttggcggattacaa 1363 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctc 459 |||||||||||||||||| ||||||||||| || |||||| Sbjct: 1364 catccagaaggagtccacactccacctggttctgcgcctc 1403
>emb|X04133.1|HVUBIQR Barley mRNA for ubiquitin polyprecursor fragment Length = 703 Score = 509 bits (257), Expect = e-141 Identities = 398/444 (89%), Gaps = 2/444 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| || |||||||||||||| || ||||| ||||||||| Sbjct: 55 atgcagatcttcgtgaagaccctgacgggcaagaccatcacactggaggtggagtcctct 114 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 115 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcatccctccggaccag 174 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||| Sbjct: 175 cagcgcctcatctttgctggcaagcagctcgaggatggccgcaccctggctgactataac 234 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||||||||| ||||||||||||||| | || | || || |||||||| ||| Sbjct: 235 atccagaaggagtccactctccacctggtgctcaggcttcgtggaggcatgcagattttc 294 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||||||||||||||||||||| ||||||| ||||| || |||||||||||| Sbjct: 295 gtgaagaccctcaccggcaagaccatcacactggaggtggagtcctctgacaccatcgac 354 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||| Sbjct: 355 aacgtcaaggcgaagatccaggacaaggagggcatccctccggaccagcagc-gcctcat 413 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| || || || | ||||||||||||||||| Sbjct: 414 tttcgcc-ggcaagcagctcgaggatggccgcactctggcagactacaacatccagaagg 472 Query: 661 ggtcacccctgcccctggngcttc 684 ||| |||| | ||||| ||||| Sbjct: 473 agtctacccttcacctggtgcttc 496 Score = 289 bits (146), Expect = 7e-75 Identities = 200/218 (91%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| || ||||||||||||||||||||||||||||| || ||||| ||||||||| Sbjct: 283 atgcagattttcgtgaagaccctcaccggcaagaccatcacactggaggtggagtcctct 342 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 343 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcatccctccggaccag 402 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||||||||| || || ||||||||||| ||||| |||||||| || || ||||||||| Sbjct: 403 cagcgcctcattttcgccggcaagcagctcgaggatggccgcactctggcagactacaac 462 Query: 421 atccagaaggagtccaccctccacctggtgctccgcct 458 |||||||||||||| ||||| ||||||||||| ||||| Sbjct: 463 atccagaaggagtctacccttcacctggtgcttcgcct 500 Score = 287 bits (145), Expect = 3e-74 Identities = 222/246 (90%), Gaps = 2/246 (0%) Strand = Plus / Plus Query: 415 tacaacatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcag 474 |||||||||||||||||||||||||| ||||||||||||||||| | ||||| |||||| Sbjct: 1 tacaacatccagaaggagtccacccttcacctggtgctccgccttcgtggtggcatgcag 60 Query: 475 atcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacacc 534 ||||||||||||||||| || |||||||||||||| ||||||| ||||| || |||||| Sbjct: 61 atcttcgtgaagaccctgacgggcaagaccatcacactggaggtggagtcctctgacacc 120 Query: 535 atcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcgg 594 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | Sbjct: 121 atcgacaacgtcaaggcgaagatccaggacaaggagggcatccctccggaccagcagc-g 179 Query: 595 cctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatcc 654 |||||| |||| | ||||||||||| || |||||||| ||||| |||| ||| ||||||| Sbjct: 180 cctcatctttg-ctggcaagcagctcgaggatggccgcaccctggctgactataacatcc 238 Query: 655 agaagg 660 |||||| Sbjct: 239 agaagg 244
>gb|U37687.1|OSU37687 Oryza sativa polyubiquitin (Rubq1) mRNA, complete cds Length = 1679 Score = 509 bits (257), Expect = e-141 Identities = 382/422 (90%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 52 agatgcagatctttgtgaagaccctcaccggcaagaccatcaccctcgaggttgagtcct 111 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 | ||||| || ||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 112 cggacaccattgacaatgtcaaggccaagatccaggacaaggagggcatccccccggacc 171 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| |||||||| |||||||||||||||||||| ||||||||||| || ||||||| Sbjct: 172 agcagcgtctcatcttcgctggcaagcagcttgaggatggccgcaccctggccgactaca 231 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||||||||||||||| || ||| | |||||||| || |||||||||| Sbjct: 232 acatccagaaggagtccaccctccaccttgtcctcaggctcaggggaggcatgcagatct 291 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 |||| |||||| | || ||||||||||||||||| |||| ||||| || |||||||| | Sbjct: 292 tcgtcaagaccttgactggcaagaccatcacccttgaggtcgagtcgtctgacaccattg 351 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 |||| |||||||| ||||||||||||||||||||||| |||||||||||||||| | ||| Sbjct: 352 acaatgtcaaggccaagatccaggacaaggagggcatccccccggaccagcagc-gtctc 410 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || || | | |||||||||||||| |||||||| ||||| |||| ||||||||||||||| Sbjct: 411 atcttcg-ctggcaagcagcttgaggatggccgcaccctggctgactacaacatccagaa 469 Query: 659 gg 660 || Sbjct: 470 gg 471 Score = 484 bits (244), Expect = e-133 Identities = 377/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||| | || ||||||||||||||||||||||| ||||| ||| Sbjct: 282 atgcagatcttcgtcaagaccttgactggcaagaccatcacccttgaggtcgagtcgtct 341 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 342 gacaccattgacaatgtcaaggccaagatccaggacaaggagggcatccccccggaccag 401 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 402 cagcgtctcatcttcgctggcaagcagcttgaggatggccgcaccctggctgactacaac 461 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| |||||| | |||||||| ||||||||||||||| Sbjct: 462 atccagaaggagtccaccctccaccttgtgctcaggctcaggggaggtatgcagatcttc 521 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||| | || ||||||||||||||||| |||| ||||| || |||||||| ||| Sbjct: 522 gtcaagaccttgactggcaagaccatcaccctcgaggtcgagtcgtctgacaccattgac 581 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| |||||||||| | ||||| Sbjct: 582 aatgtcaaggccaagatccaggacaaggagggcatccccccagaccagcagc-gtctcat 640 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| |||||||||| ||||||||||||||||| Sbjct: 641 cttcgcc-ggcaagcagctggaggatggccgcacccttgctgactacaacatccagaagg 699 Score = 460 bits (232), Expect = e-126 Identities = 375/421 (89%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 965 gatgcagatcttcgtgaagaccctgactggcaagaccattacccttgaggttgagtcgtc 1024 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1025 cgacactattgacaacgtgaaggcgaagatccaggacaaggagggcatccccccggacca 1084 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||||| |||||||| || ||||||||||| ||||| ||||||||| | ||||||||||| Sbjct: 1085 gcagcgtctcatcttcgccggcaagcagctggaggatggccgcaccttggctgactacaa 1144 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||| | ||||||||||| ||||||||||| Sbjct: 1145 catccagaaggagtccacccttcacctggttctcaggctcaggggtgggatgcagatctt 1204 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || ||||||||||| ||||| |||| |||||| || ||||| || || Sbjct: 1205 cgtgaagaccctgactggcaagaccattacccttgaggttgagtcgtccgacactattga 1264 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 |||||| ||||||||||||||||||||||||||||| |||||||||||||||| | || | Sbjct: 1265 caacgtgaaggcgaagatccaggacaaggagggcatccccccggaccagcagc-gtctga 1323 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | || ||||||||||| |||||||| ||| | || | ||||||||||||||| Sbjct: 1324 tctttg-ctggtaagcagcttgaggatggccgcaccttggcggattacaacatccagaag 1382 Query: 660 g 660 | Sbjct: 1383 g 1383 Score = 460 bits (232), Expect = e-126 Identities = 374/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 738 atgcagatcttcgtcaagaccctgaccggcaagaccatcaccctcgaggtcgagtcctcg 797 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||||||||| || || || |||||||||||||||||||| ||||||||||||||| Sbjct: 798 gacacgatcgacaatgtgaaagccaagatccaggacaaggagggtatccccccggaccag 857 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| ||||||||| | |||||||||||| Sbjct: 858 cagcgtctcatcttcgccggcaagcagctggaggatggccgcaccttggctgactacaac 917 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| ||| | ||||||||||| |||||||||||| Sbjct: 918 atccagaaggagtccacccttcacctggtactcaggctcaggggtgggatgcagatcttc 977 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || ||||||||||| ||||| |||| |||||| || ||||| || ||| Sbjct: 978 gtgaagaccctgactggcaagaccattacccttgaggttgagtcgtccgacactattgac 1037 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||||||||||||||||||||||||||| |||||||||||||||| | ||||| Sbjct: 1038 aacgtgaaggcgaagatccaggacaaggagggcatccccccggaccagcagc-gtctcat 1096 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| ||| | |||| ||||||||||||||||| Sbjct: 1097 cttcgcc-ggcaagcagctggaggatggccgcaccttggctgactacaacatccagaagg 1155 Score = 452 bits (228), Expect = e-124 Identities = 373/420 (88%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||| | || ||||||||||||||||| ||||| ||||| ||| Sbjct: 510 atgcagatcttcgtcaagaccttgactggcaagaccatcaccctcgaggtcgagtcgtct 569 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 570 gacaccattgacaatgtcaaggccaagatccaggacaaggagggcatccccccagaccag 629 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 630 cagcgtctcatcttcgccggcaagcagctggaggatggccgcacccttgctgactacaac 689 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| |||||| | |||||||| ||||||||||||||| Sbjct: 690 atccagaaggagtccaccctccaccttgtgctcaggctcaggggaggtatgcagatcttc 749 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| |||||||||||||||||||| |||| ||||| |||||||| |||||| Sbjct: 750 gtcaagaccctgaccggcaagaccatcaccctcgaggtcgagtcctcggacacgatcgac 809 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || || || |||||||||||||||||||| || |||||||||||||||| | ||||| Sbjct: 810 aatgtgaaagccaagatccaggacaaggagggtatccccccggaccagcagc-gtctcat 868 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| ||| | |||| ||||||||||||||||| Sbjct: 869 cttcgcc-ggcaagcagctggaggatggccgcaccttggctgactacaacatccagaagg 927 Score = 285 bits (144), Expect = 1e-73 Identities = 201/220 (91%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||| || Sbjct: 1193 gatgcagatcttcgtgaagaccctgactggcaagaccattacccttgaggttgagtcgtc 1252 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1253 cgacactattgacaacgtgaaggcgaagatccaggacaaggagggcatccccccggacca 1312 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||||| || ||||||||||| |||||||||||||| ||||||||| | || || ||||| Sbjct: 1313 gcagcgtctgatctttgctggtaagcagcttgaggatggccgcaccttggcggattacaa 1372 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctc 459 |||||||||||||||||| ||||||||||| ||||||||| Sbjct: 1373 catccagaaggagtccacactccacctggtcctccgcctc 1412
>gb|AF184280.1|AF184280 Oryza sativa polyubiquitin (RUBQ2) gene, complete cds Length = 4442 Score = 502 bits (253), Expect = e-138 Identities = 397/444 (89%), Gaps = 2/444 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| ||||| |||||||| || |||||||||||||||||||| ||||| ||||| ||| Sbjct: 3470 atgcaaatcttcgtgaagactctgaccggcaagaccatcaccctcgaggtggagtcttct 3529 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || |||||||| |||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 3530 gataccatcgacaatgtcaaggccaagatccaggacaaggagggcattcccccggaccag 3589 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||||||||||||||||||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 3590 cagcgcctcatctttgctggcaagcagctggaggatggcaggacccttgctgactacaac 3649 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||| Sbjct: 3650 atccagaaggagtccaccctccaccttgtgctccgccttcgtggtggtatgcagatcttt 3709 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| |||||||||||||||||||||| |||| ||||||||||||||| Sbjct: 3710 gtcaagaccctcacaggcaagaccatcaccctggaggttgagagctcggacaccatcgac 3769 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| ||||||||||||||||||||||| ||||| |||||||||| | ||||| Sbjct: 3770 aacgtcaaggccaagatccaggacaaggagggcatccccccagaccagcagc-gtctcat 3828 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| |||||||| | ||||||||||||||||| Sbjct: 3829 cttcgcc-ggcaagcagctcgaggatggccgcacccttgccgactacaacatccagaagg 3887 Query: 661 ggtcacccctgcccctggngcttc 684 ||| |||| | ||||| ||||| Sbjct: 3888 agtctaccctccacctggtgcttc 3911 Score = 498 bits (251), Expect = e-137 Identities = 379/420 (90%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||| || |||||||||||||||||||| ||||| || || ||| Sbjct: 3242 atgcagatctttgtcaagacactgaccggcaagaccatcaccctcgaggtggaatcttct 3301 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 3302 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccggaccag 3361 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||| ||||||||||||||||||||| | |||||||||||||||||| Sbjct: 3362 cagcgtctcatctttgccggcaagcagcttgaggacggcaggacccttgctgactacaac 3421 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| || || ||||| || ||||| |||||||| || ||||| |||||| Sbjct: 3422 atccagaaggagtcaacgcttcaccttgtcctccgtctcaggggaggcatgcaaatcttc 3481 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| || |||||||||||||||||||| |||| |||||||| || ||||||||| Sbjct: 3482 gtgaagactctgaccggcaagaccatcaccctcgaggtggagtcttctgataccatcgac 3541 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 3542 aatgtcaaggccaagatccaggacaaggagggcattcccccggaccagcagc-gcctcat 3600 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||| | |||||||||| ||||||||||||||||| Sbjct: 3601 ctttg-ctggcaagcagctggaggatggcaggacccttgctgactacaacatccagaagg 3659 Score = 494 bits (249), Expect = e-136 Identities = 382/425 (89%), Gaps = 2/425 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||| || ||||||||||| |||||||||||||| ||||| ||| Sbjct: 3014 atgcagatctttgtcaagactctgaccggcaagactatcacccttgaggtggagtcttct 3073 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 3074 gacaccatcgacaacgtcaaggccaagatccaggacaaagagggcatccccccagaccag 3133 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 3134 cagcgtctcatcttcgccggcaagcagctggaggatggcaggacccttgctgactacaac 3193 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || ||||||||| | ||||| ||||||||||| Sbjct: 3194 atccagaaggagtccaccctccaccttgtcctccgcctccgtggtggcatgcagatcttt 3253 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| || |||||||||||||||||||| |||| || ||||| |||||||||||| Sbjct: 3254 gtcaagacactgaccggcaagaccatcaccctcgaggtggaatcttctgacaccatcgac 3313 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 3314 aacgtcaaggccaagatccaggacaaggagggcattcccccggaccagcagc-gtctcat 3372 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| || ||| | |||||||||| ||||||||||||||||| Sbjct: 3373 ctttgcc-ggcaagcagcttgaggacggcaggacccttgctgactacaacatccagaagg 3431 Query: 661 ggtca 665 |||| Sbjct: 3432 agtca 3436 Score = 440 bits (222), Expect = e-120 Identities = 373/422 (88%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||||||||||||||| | ||||||||||| |||||||| ||||| ||||||| Sbjct: 2784 agatgcagatctttgtgaagacattgaccggcaagactatcaccctcgaggtggagtcct 2843 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 ||||||| ||||| || |||||||| |||||||| || |||||||||||||||||||||| Sbjct: 2844 ctgacaccatcgataatgtcaaggctaagatccaagataaggagggcatccccccggacc 2903 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| |||||||| |||||||||||||| ||||| ||| | |||||||||||||||| Sbjct: 2904 agcagcgtctcatcttcgctggcaagcagctggaggatggcaggacccttgctgactaca 2963 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||| ||||| ||||| || ||||||||| | ||||| |||||||||| Sbjct: 2964 acatccagaaggagtcgacccttcaccttgtcctccgcctccgtggtggcatgcagatct 3023 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | || ||||| || ||||||||||| |||||||| |||| |||||||| |||||||||| Sbjct: 3024 ttgtcaagactctgaccggcaagactatcacccttgaggtggagtcttctgacaccatcg 3083 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 ||||||||||||| |||||||||||||| |||||||| ||||| |||||||||| | ||| Sbjct: 3084 acaacgtcaaggccaagatccaggacaaagagggcatccccccagaccagcagc-gtctc 3142 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || || | | ||||||||||| || |||||| | |||||||||| ||||||||||||||| Sbjct: 3143 atcttcgcc-ggcaagcagctggaggatggcaggacccttgctgactacaacatccagaa 3201 Query: 659 gg 660 || Sbjct: 3202 gg 3203 Score = 410 bits (207), Expect = e-111 Identities = 368/420 (87%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| ||| Sbjct: 3698 atgcagatctttgtcaagaccctcacaggcaagaccatcaccctggaggttgagagctcg 3757 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 3758 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcatccccccagaccag 3817 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| |||||||||||||| ||||||||| Sbjct: 3818 cagcgtctcatcttcgccggcaagcagctcgaggatggccgcacccttgccgactacaac 3877 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||||||||||||||| || ||| | |||||||||||||||||| Sbjct: 3878 atccagaaggagtctaccctccacctggtgcttcgtctccgtggtggtatgcagatcttc 3937 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | || || ||||||||||| |||||| |||| || |||||||| || Sbjct: 3938 gtgaagaccttgactgggaagaccatcactttggaggttgagagctccgacaccattgat 3997 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||||||||||||||| |||||||| |||||||||| | || || Sbjct: 3998 aatgtgaaggccaagatccaggacaaggaggggattcccccagaccagcagc-gtctgat 4056 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || ||||| || ||||| || | ||||||||||||||||| Sbjct: 4057 cttcg-ctggcaagcagctggaggatggacgcaccctcgccgactacaacatccagaagg 4115 Score = 214 bits (108), Expect = 4e-52 Identities = 198/228 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||| | || || ||||||||||| | ||||||||| ||| Sbjct: 3926 atgcagatcttcgtgaagaccttgactgggaagaccatcactttggaggttgagagctcc 3985 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| |||||||||||||||||||| || ||||| |||||| Sbjct: 3986 gacaccattgataatgtgaaggccaagatccaggacaaggaggggattcccccagaccag 4045 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| |||||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 4046 cagcgtctgatcttcgctggcaagcagctggaggatggacgcaccctcgccgactacaac 4105 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 ||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 4106 atccagaaggagtccaccctccacctggtgctccgcctccgtggtggt 4153
>dbj|AK067024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091J24, full insert sequence Length = 1189 Score = 502 bits (253), Expect = e-138 Identities = 384/426 (90%), Gaps = 2/426 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||| || |||||||||||||||||||| ||||| || || ||| Sbjct: 539 atgcagatctttgtcaagacactgaccggcaagaccatcaccctcgaggtggaatcttct 598 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 599 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccggaccag 658 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||| ||||||||||||||||||||| | |||||||||||||||||| Sbjct: 659 cagcgtctcatctttgccggcaagcagcttgaggacggcaggacccttgctgactacaac 718 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| || || ||||| || ||||| |||||||| || ||||| |||||| Sbjct: 719 atccagaaggagtcaacgcttcaccttgtcctccgtctcaggggaggcatgcaaatcttc 778 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| || |||||||||||||||||||| |||| |||||||| || ||||||||| Sbjct: 779 gtgaagactctgaccggcaagaccatcaccctcgaggtggagtcttctgataccatcgac 838 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 839 aatgtcaaggccaagatccaggacaaggagggcattcccccggaccagcagc-gcctcat 897 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||| | |||||||||| ||||||||||||||||| Sbjct: 898 ctttg-ctggcaagcagctggaggatggcaggacccttgctgactacaacatccagaagg 956 Query: 661 ggtcac 666 ||||| Sbjct: 957 agtcac 962 Score = 494 bits (249), Expect = e-136 Identities = 382/425 (89%), Gaps = 2/425 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||| || ||||||||||| |||||||||||||| ||||| ||| Sbjct: 311 atgcagatctttgtcaagactctgaccggcaagactatcacccttgaggtggagtcttct 370 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 371 gacaccatcgacaacgtcaaggccaagatccaggacaaagagggcatccccccagaccag 430 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 431 cagcgtctcatcttcgccggcaagcagctggaggatggcaggacccttgctgactacaac 490 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || ||||||||| | ||||| ||||||||||| Sbjct: 491 atccagaaggagtccaccctccaccttgtcctccgcctccgtggtggcatgcagatcttt 550 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| || |||||||||||||||||||| |||| || ||||| |||||||||||| Sbjct: 551 gtcaagacactgaccggcaagaccatcaccctcgaggtggaatcttctgacaccatcgac 610 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 611 aacgtcaaggccaagatccaggacaaggagggcattcccccggaccagcagc-gtctcat 669 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| || ||| | |||||||||| ||||||||||||||||| Sbjct: 670 ctttgcc-ggcaagcagcttgaggacggcaggacccttgctgactacaacatccagaagg 728 Query: 661 ggtca 665 |||| Sbjct: 729 agtca 733 Score = 440 bits (222), Expect = e-120 Identities = 373/422 (88%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||||||||||||||| | ||||||||||| |||||||| ||||| ||||||| Sbjct: 81 agatgcagatctttgtgaagacattgaccggcaagactatcaccctcgaggtggagtcct 140 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 ||||||| ||||| || |||||||| |||||||| || |||||||||||||||||||||| Sbjct: 141 ctgacaccatcgataatgtcaaggctaagatccaagataaggagggcatccccccggacc 200 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| |||||||| |||||||||||||| ||||| ||| | |||||||||||||||| Sbjct: 201 agcagcgtctcatcttcgctggcaagcagctggaggatggcaggacccttgctgactaca 260 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||| ||||| ||||| || ||||||||| | ||||| |||||||||| Sbjct: 261 acatccagaaggagtcgacccttcaccttgtcctccgcctccgtggtggcatgcagatct 320 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | || ||||| || ||||||||||| |||||||| |||| |||||||| |||||||||| Sbjct: 321 ttgtcaagactctgaccggcaagactatcacccttgaggtggagtcttctgacaccatcg 380 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 ||||||||||||| |||||||||||||| |||||||| ||||| |||||||||| | ||| Sbjct: 381 acaacgtcaaggccaagatccaggacaaagagggcatccccccagaccagcagc-gtctc 439 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || || | | ||||||||||| || |||||| | |||||||||| ||||||||||||||| Sbjct: 440 atcttcgcc-ggcaagcagctggaggatggcaggacccttgctgactacaacatccagaa 498 Query: 659 gg 660 || Sbjct: 499 gg 500
>gb|AF093505.1|AF093505 Saccharum hybrid cultivar H32-8560 polyubiquitin (ubi9) gene, complete cds Length = 5174 Score = 502 bits (253), Expect = e-138 Identities = 378/420 (90%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| || || ||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 4373 atgcagattttcgtcaagaccctcaccggcaagaccatcaccctggaggtggagtcctct 4432 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| || ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 4433 gacaccattgacaatgtgaaggcgaagatccaggataaggagggcatccccccggaccag 4492 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| | |||||||||||||||||||||||||| ||||||||||| || || |||||| Sbjct: 4493 cagcgtyttatctttgctggcaagcagcttgaggatggccgcaccctggcagantacaac 4552 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| ||||||||||||||||| | |||||||||||||| ||| Sbjct: 4553 atccagaaggagtccacccttcacctggtgctccgccttcgcggtggtatgcagatyttc 4612 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||||||||||||||||||||||||||||| ||||| || |||||||||||| Sbjct: 4613 gtcaagaccctcaccggcaagaccatcaccctggaggtggagtcctctgacaccatcgac 4672 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||||||||||||||||||||||||||| |||||||||||||||| | ||||| Sbjct: 4673 aatgtgaaggcgaagatccaggacaaggagggcatccccccggaccagcagc-gtctcat 4731 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| ||||| || | ||||||||||||||||| Sbjct: 4732 cttcgcc-ggcaagcagctggaggatggccgcaccctggcagactacaacatccagaagg 4790 Score = 466 bits (235), Expect = e-128 Identities = 372/418 (88%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| || || ||||||||||| |||||||| ||||| |||||||| ||||| ||| Sbjct: 3917 atgcagattttcgtcaagaccctcactggcaagactatcacgcttgaggtcgagtcttct 3976 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 3977 gacacgatcgacaacgtgaaggccaagatccaggacaaggagggaatccccccggaccag 4036 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||| || |||||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 4037 cagcgtytcattttcgctggcaagcagctcgaggatggccgcaccctcgctgactacaac 4096 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| || |||||||| |||||| | ||||||||||| |||||||||||| Sbjct: 4097 atccagaaggagtcgactctccaccttgtgctcaggctcaggggtggcatgcagatcttc 4156 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||||||||||||| |||||| ||||| ||||||||||| ||| Sbjct: 4157 gtcaagaccctcactggcaagaccatcaccttggaggtggagtcctcggacaccattgac 4216 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||||||||||||||||||||||||||| |||||||||||||||| | ||||| Sbjct: 4217 aatgtgaaggcgaagatccaggacaaggagggcatccccccggaccagcagc-gtctcat 4275 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || | | |||||||| ||||| |||||||| |||||||| | |||||||||||||| Sbjct: 4276 yttcgcc-ggcaagcarcttgaggatggccgcacccttgcggantacaacatccagaa 4332 Score = 462 bits (233), Expect = e-127 Identities = 372/420 (88%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||||||||||||| | ||||| |||||||| Sbjct: 4145 atgcagatcttcgtcaagaccctcactggcaagaccatcaccttggaggtggagtcctcg 4204 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4205 gacaccattgacaatgtgaaggcgaagatccaggacaaggagggcatccccccggaccag 4264 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||| || || |||||||| |||||||| |||||||||||||| || |||||| Sbjct: 4265 cagcgtctcatyttcgccggcaagcarcttgaggatggccgcacccttgcggantacaac 4324 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| ||||||||||||||||| | |||||||||||||| ||| Sbjct: 4325 atccagaargagtccacccttcacctggtgctccgccttcgtggtggtatgcagattttc 4384 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||||||||||||||||||||||||||||| ||||| || |||||||| ||| Sbjct: 4385 gtcaagaccctcaccggcaagaccatcaccctggaggtggagtcctctgacaccattgac 4444 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||||||||||||||| ||||||||||| |||||||||||||||| | | || Sbjct: 4445 aatgtgaaggcgaagatccaggataaggagggcatccccccggaccagcagc-gtyttat 4503 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| |||||||| ||||| || | |||||||||||||||| Sbjct: 4504 ctttg-ctggcaagcagcttgaggatggccgcaccctggcagantacaacatccagaagg 4562 Score = 414 bits (209), Expect = e-112 Identities = 369/422 (87%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||| || || ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 3687 agatgcagattttcgttaagaccctcactggcaagaccatcacccttgaggttgagtcct 3746 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 | ||||| || ||||| |||||||| ||||||||||||||||| ||||| || || || | Sbjct: 3747 cagacactattgacaatgtcaaggctaagatccaggacaaggaaggcattcctccagatc 3806 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||| | || || ||||||||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 3807 agcagaggctgatytttgctggcaagcagctcgaggatggccgtaccctagctgactaca 3866 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 ||||||||||||||||||||||||||||||||||| | || ||||| || |||||||| | Sbjct: 3867 acatccagaaggagtccaccctccacctggtgctcaggcttaggggaggcatgcagattt 3926 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 |||| ||||||||||| |||||||| ||||| || |||| |||||||| ||||| |||| Sbjct: 3927 tcgtcaagaccctcactggcaagactatcacgcttgaggtcgagtcttctgacacgatcg 3986 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 ||||||| ||||| |||||||||||||||||||| || |||||||||||||||| | || Sbjct: 3987 acaacgtgaaggccaagatccaggacaaggagggaatccccccggaccagcagc-gtytc 4045 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || ||| | ||||||||||| || |||||||| ||||| |||| ||||||||||||||| Sbjct: 4046 at-tttcgctggcaagcagctcgaggatggccgcaccctcgctgactacaacatccagaa 4104 Query: 659 gg 660 || Sbjct: 4105 gg 4106 Score = 303 bits (153), Expect = 5e-79 Identities = 199/215 (92%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| || || ||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 4601 atgcagatyttcgtcaagaccctcaccggcaagaccatcaccctggaggtggagtcctct 4660 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4661 gacaccatcgacaatgtgaaggcgaagatccaggacaaggagggcatccccccggaccag 4720 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| ||||||||||| || ||||||||| Sbjct: 4721 cagcgtctcatcttcgccggcaagcagctggaggatggccgcaccctggcagactacaac 4780 Query: 421 atccagaaggagtccaccctccacctggtgctccg 455 ||||||||||||||||| ||||||||||||||||| Sbjct: 4781 atccagaaggagtccactctccacctggtgctccg 4815 Score = 48.1 bits (24), Expect = 0.047 Identities = 27/28 (96%) Strand = Plus / Plus Query: 721 accctcactggcaagaacatcacccttg 748 |||||||||||||||| ||||||||||| Sbjct: 3707 accctcactggcaagaccatcacccttg 3734 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Plus Query: 95 tgccgtagcctcacgggactctt 117 ||||||||||||||||||||||| Sbjct: 2160 tgccgtagcctcacgggactctt 2182
>ref|XM_506723.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ9003_G05.28 mRNA Length = 1642 Score = 498 bits (251), Expect = e-137 Identities = 379/420 (90%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||| || |||||||||||||||||||| ||||| || || ||| Sbjct: 539 atgcagatctttgtcaagacactgaccggcaagaccatcaccctcgaggtggaatcttct 598 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 599 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccggaccag 658 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||| ||||||||||||||||||||| | |||||||||||||||||| Sbjct: 659 cagcgtctcatctttgccggcaagcagcttgaggacggcaggacccttgctgactacaac 718 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| || || ||||| || ||||| |||||||| || ||||| |||||| Sbjct: 719 atccagaaggagtcaacgcttcaccttgtcctccgtctcaggggaggcatgcaaatcttc 778 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| || |||||||||||||||||||| |||| |||||||| || ||||||||| Sbjct: 779 gtgaagactctgaccggcaagaccatcaccctcgaggtggagtcttctgataccatcgac 838 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 839 aatgtcaaggccaagatccaggacaaggagggcattcccccggaccagcagc-gcctcat 897 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||| | |||||||||| ||||||||||||||||| Sbjct: 898 ctttg-ctggcaagcagctggaggatggcaggacccttgctgactacaacatccagaagg 956 Score = 494 bits (249), Expect = e-136 Identities = 396/444 (89%), Gaps = 2/444 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| ||||| |||||||| || |||||||||||||||||||| ||||| ||||| ||| Sbjct: 767 atgcaaatcttcgtgaagactctgaccggcaagaccatcaccctcgaggtggagtcttct 826 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || |||||||| |||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 827 gataccatcgacaatgtcaaggccaagatccaggacaaggagggcattcccccggaccag 886 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||||||||||||||||||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 887 cagcgcctcatctttgctggcaagcagctggaggatggcaggacccttgctgactacaac 946 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||| Sbjct: 947 atccagaaggagtccaccctccaccttgtgctccgccttcgtggtggtatgcagatcttt 1006 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| |||||||||||||||||||||| |||| ||||||||||||||| Sbjct: 1007 gtcaagaccctcacaggcaagaccatcaccctggaggttgagagctcggacaccatcgac 1066 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| ||||||||||||||||||||||| ||||| |||||||||| | ||||| Sbjct: 1067 aacgtcaaggccaagatccaggacaaggagggcatccccccagaccagcagc-gtctcat 1125 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| ||||| || | ||||||||||||||||| Sbjct: 1126 cttcgcc-ggcaagcagctcgaggatggccgcaccctcgccgactacaacatccagaagg 1184 Query: 661 ggtcacccctgcccctggngcttc 684 ||| |||| | ||||| ||||| Sbjct: 1185 agtctaccctccacctggtgcttc 1208 Score = 494 bits (249), Expect = e-136 Identities = 382/425 (89%), Gaps = 2/425 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||| || ||||||||||| |||||||||||||| ||||| ||| Sbjct: 311 atgcagatctttgtcaagactctgaccggcaagactatcacccttgaggtggagtcttct 370 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 371 gacaccatcgacaacgtcaaggccaagatccaggacaaagagggcatccccccagaccag 430 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 431 cagcgtctcatcttcgccggcaagcagctggaggatggcaggacccttgctgactacaac 490 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || ||||||||| | ||||| ||||||||||| Sbjct: 491 atccagaaggagtccaccctccaccttgtcctccgcctccgtggtggcatgcagatcttt 550 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| || |||||||||||||||||||| |||| || ||||| |||||||||||| Sbjct: 551 gtcaagacactgaccggcaagaccatcaccctcgaggtggaatcttctgacaccatcgac 610 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 611 aacgtcaaggccaagatccaggacaaggagggcattcccccggaccagcagc-gtctcat 669 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| || ||| | |||||||||| ||||||||||||||||| Sbjct: 670 ctttgcc-ggcaagcagcttgaggacggcaggacccttgctgactacaacatccagaagg 728 Query: 661 ggtca 665 |||| Sbjct: 729 agtca 733 Score = 440 bits (222), Expect = e-120 Identities = 373/422 (88%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||||||||||||||| | ||||||||||| |||||||| ||||| ||||||| Sbjct: 81 agatgcagatctttgtgaagacattgaccggcaagactatcaccctcgaggtggagtcct 140 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 ||||||| ||||| || |||||||| |||||||| || |||||||||||||||||||||| Sbjct: 141 ctgacaccatcgataatgtcaaggctaagatccaagataaggagggcatccccccggacc 200 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| |||||||| |||||||||||||| ||||| ||| | |||||||||||||||| Sbjct: 201 agcagcgtctcatcttcgctggcaagcagctggaggatggcaggacccttgctgactaca 260 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||| ||||| ||||| || ||||||||| | ||||| |||||||||| Sbjct: 261 acatccagaaggagtcgacccttcaccttgtcctccgcctccgtggtggcatgcagatct 320 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | || ||||| || ||||||||||| |||||||| |||| |||||||| |||||||||| Sbjct: 321 ttgtcaagactctgaccggcaagactatcacccttgaggtggagtcttctgacaccatcg 380 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 ||||||||||||| |||||||||||||| |||||||| ||||| |||||||||| | ||| Sbjct: 381 acaacgtcaaggccaagatccaggacaaagagggcatccccccagaccagcagc-gtctc 439 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || || | | ||||||||||| || |||||| | |||||||||| ||||||||||||||| Sbjct: 440 atcttcgcc-ggcaagcagctggaggatggcaggacccttgctgactacaacatccagaa 498 Query: 659 gg 660 || Sbjct: 499 gg 500 Score = 402 bits (203), Expect = e-109 Identities = 367/420 (87%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| ||| Sbjct: 995 atgcagatctttgtcaagaccctcacaggcaagaccatcaccctggaggttgagagctcg 1054 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1055 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcatccccccagaccag 1114 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| ||||||||||| || ||||||||| Sbjct: 1115 cagcgtctcatcttcgccggcaagcagctcgaggatggccgcaccctcgccgactacaac 1174 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||||||||||||||| || ||| | |||||||||||||||||| Sbjct: 1175 atccagaaggagtctaccctccacctggtgcttcgtctccgtggtggtatgcagatcttc 1234 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | || || ||||||||||| |||||| |||| || |||||||| || Sbjct: 1235 gtgaagaccttgactgggaagaccatcactttggaggttgagagctccgacaccattgat 1294 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||||||||||||||| |||||||| |||||||||| | || || Sbjct: 1295 aatgtgaaggccaagatccaggacaaggaggggattcccccagaccagcagc-gtctgat 1353 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || ||||| || ||||| || | ||||||||||||||||| Sbjct: 1354 cttcg-ctggcaagcagctggaggatggacgcaccctcgccgactacaacatccagaagg 1412 Score = 214 bits (108), Expect = 4e-52 Identities = 198/228 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||| | || || ||||||||||| | ||||||||| ||| Sbjct: 1223 atgcagatcttcgtgaagaccttgactgggaagaccatcactttggaggttgagagctcc 1282 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| |||||||||||||||||||| || ||||| |||||| Sbjct: 1283 gacaccattgataatgtgaaggccaagatccaggacaaggaggggattcccccagaccag 1342 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| |||||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 1343 cagcgtctgatcttcgctggcaagcagctggaggatggacgcaccctcgccgactacaac 1402 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 ||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 1403 atccagaaggagtccaccctccacctggtgctccgcctccgtggtggt 1450
>ref|XM_464194.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1640 Score = 498 bits (251), Expect = e-137 Identities = 379/420 (90%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||| || |||||||||||||||||||| ||||| || || ||| Sbjct: 536 atgcagatctttgtcaagacactgaccggcaagaccatcaccctcgaggtggaatcttct 595 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 596 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccggaccag 655 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||| ||||||||||||||||||||| | |||||||||||||||||| Sbjct: 656 cagcgtctcatctttgccggcaagcagcttgaggacggcaggacccttgctgactacaac 715 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| || || ||||| || ||||| |||||||| || ||||| |||||| Sbjct: 716 atccagaaggagtcaacgcttcaccttgtcctccgtctcaggggaggcatgcaaatcttc 775 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| || |||||||||||||||||||| |||| |||||||| || ||||||||| Sbjct: 776 gtgaagactctgaccggcaagaccatcaccctcgaggtggagtcttctgataccatcgac 835 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 836 aatgtcaaggccaagatccaggacaaggagggcattcccccggaccagcagc-gcctcat 894 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||| | |||||||||| ||||||||||||||||| Sbjct: 895 ctttg-ctggcaagcagctggaggatggcaggacccttgctgactacaacatccagaagg 953 Score = 494 bits (249), Expect = e-136 Identities = 396/444 (89%), Gaps = 2/444 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| ||||| |||||||| || |||||||||||||||||||| ||||| ||||| ||| Sbjct: 764 atgcaaatcttcgtgaagactctgaccggcaagaccatcaccctcgaggtggagtcttct 823 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || |||||||| |||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 824 gataccatcgacaatgtcaaggccaagatccaggacaaggagggcattcccccggaccag 883 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||||||||||||||||||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 884 cagcgcctcatctttgctggcaagcagctggaggatggcaggacccttgctgactacaac 943 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||| Sbjct: 944 atccagaaggagtccaccctccaccttgtgctccgccttcgtggtggtatgcagatcttt 1003 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| |||||||||||||||||||||| |||| ||||||||||||||| Sbjct: 1004 gtcaagaccctcacaggcaagaccatcaccctggaggttgagagctcggacaccatcgac 1063 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| ||||||||||||||||||||||| ||||| |||||||||| | ||||| Sbjct: 1064 aacgtcaaggccaagatccaggacaaggagggcatccccccagaccagcagc-gtctcat 1122 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| ||||| || | ||||||||||||||||| Sbjct: 1123 cttcgcc-ggcaagcagctcgaggatggccgcaccctcgccgactacaacatccagaagg 1181 Query: 661 ggtcacccctgcccctggngcttc 684 ||| |||| | ||||| ||||| Sbjct: 1182 agtctaccctccacctggtgcttc 1205 Score = 494 bits (249), Expect = e-136 Identities = 382/425 (89%), Gaps = 2/425 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||| || ||||||||||| |||||||||||||| ||||| ||| Sbjct: 308 atgcagatctttgtcaagactctgaccggcaagactatcacccttgaggtggagtcttct 367 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 368 gacaccatcgacaacgtcaaggccaagatccaggacaaagagggcatccccccagaccag 427 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 428 cagcgtctcatcttcgccggcaagcagctggaggatggcaggacccttgctgactacaac 487 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || ||||||||| | ||||| ||||||||||| Sbjct: 488 atccagaaggagtccaccctccaccttgtcctccgcctccgtggtggcatgcagatcttt 547 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| || |||||||||||||||||||| |||| || ||||| |||||||||||| Sbjct: 548 gtcaagacactgaccggcaagaccatcaccctcgaggtggaatcttctgacaccatcgac 607 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 608 aacgtcaaggccaagatccaggacaaggagggcattcccccggaccagcagc-gtctcat 666 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| || ||| | |||||||||| ||||||||||||||||| Sbjct: 667 ctttgcc-ggcaagcagcttgaggacggcaggacccttgctgactacaacatccagaagg 725 Query: 661 ggtca 665 |||| Sbjct: 726 agtca 730 Score = 440 bits (222), Expect = e-120 Identities = 373/422 (88%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||||||||||||||| | ||||||||||| |||||||| ||||| ||||||| Sbjct: 78 agatgcagatctttgtgaagacattgaccggcaagactatcaccctcgaggtggagtcct 137 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 ||||||| ||||| || |||||||| |||||||| || |||||||||||||||||||||| Sbjct: 138 ctgacaccatcgataatgtcaaggctaagatccaagataaggagggcatccccccggacc 197 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| |||||||| |||||||||||||| ||||| ||| | |||||||||||||||| Sbjct: 198 agcagcgtctcatcttcgctggcaagcagctggaggatggcaggacccttgctgactaca 257 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||| ||||| ||||| || ||||||||| | ||||| |||||||||| Sbjct: 258 acatccagaaggagtcgacccttcaccttgtcctccgcctccgtggtggcatgcagatct 317 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | || ||||| || ||||||||||| |||||||| |||| |||||||| |||||||||| Sbjct: 318 ttgtcaagactctgaccggcaagactatcacccttgaggtggagtcttctgacaccatcg 377 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 ||||||||||||| |||||||||||||| |||||||| ||||| |||||||||| | ||| Sbjct: 378 acaacgtcaaggccaagatccaggacaaagagggcatccccccagaccagcagc-gtctc 436 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || || | | ||||||||||| || |||||| | |||||||||| ||||||||||||||| Sbjct: 437 atcttcgcc-ggcaagcagctggaggatggcaggacccttgctgactacaacatccagaa 495 Query: 659 gg 660 || Sbjct: 496 gg 497 Score = 402 bits (203), Expect = e-109 Identities = 367/420 (87%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| ||| Sbjct: 992 atgcagatctttgtcaagaccctcacaggcaagaccatcaccctggaggttgagagctcg 1051 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1052 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcatccccccagaccag 1111 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| ||||||||||| || ||||||||| Sbjct: 1112 cagcgtctcatcttcgccggcaagcagctcgaggatggccgcaccctcgccgactacaac 1171 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||||||||||||||| || ||| | |||||||||||||||||| Sbjct: 1172 atccagaaggagtctaccctccacctggtgcttcgtctccgtggtggtatgcagatcttc 1231 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | || || ||||||||||| |||||| |||| || |||||||| || Sbjct: 1232 gtgaagaccttgactgggaagaccatcactttggaggttgagagctccgacaccattgat 1291 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||||||||||||||| |||||||| |||||||||| | || || Sbjct: 1292 aatgtgaaggccaagatccaggacaaggaggggattcccccagaccagcagc-gtctgat 1350 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || ||||| || ||||| || | ||||||||||||||||| Sbjct: 1351 cttcg-ctggcaagcagctggaggatggacgcaccctcgccgactacaacatccagaagg 1409 Score = 214 bits (108), Expect = 4e-52 Identities = 198/228 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||| | || || ||||||||||| | ||||||||| ||| Sbjct: 1220 atgcagatcttcgtgaagaccttgactgggaagaccatcactttggaggttgagagctcc 1279 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| |||||||||||||||||||| || ||||| |||||| Sbjct: 1280 gacaccattgataatgtgaaggccaagatccaggacaaggaggggattcccccagaccag 1339 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| |||||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 1340 cagcgtctgatcttcgctggcaagcagctggaggatggacgcaccctcgccgactacaac 1399 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 ||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 1400 atccagaaggagtccaccctccacctggtgctccgcctccgtggtggt 1447
>gb|S94464.1| polyubiquitin [maize, Genomic, 3841 nt] Length = 3841 Score = 498 bits (251), Expect = e-137 Identities = 379/420 (90%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||| ||||| ||||||||||| |||||||| ||||| ||||||||| Sbjct: 2222 atgcagatctttgtgaaaaccctgaccggcaagactatcaccctcgaggtggagtcctct 2281 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || |||||||||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 2282 gacaccattgacaacgtcaaggccaagatccaggacaaggagggcatccctccagaccag 2341 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 2342 cagcggctcatctttgctgggaagcagcttgaggacgggcgcacgcttgccgactacaac 2401 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| |||||||||| ||||||| ||||||||||| || |||||||||||| Sbjct: 2402 atccagaaggagagcaccctccacttggtgctgcgcctcaggggaggcatgcagatcttc 2461 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||| |||||||| |||| |||||||| |||||||||||| Sbjct: 2462 gtgaagaccctgaccggcaagactatcaccctcgaggtggagtcttcagacaccatcgac 2521 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 2522 aacgtcaaggccaagatccaggacaaggagggcattcccccagaccagcagcgg-ctcat 2580 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | || ||||||||||| || || || || ||||| | ||||||||||||||||| Sbjct: 2581 ctttg-ctggaaagcagcttgaggacgggcgcacgcttgccgactacaacatccagaagg 2639 Score = 458 bits (231), Expect = e-125 Identities = 374/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||| |||||||| ||||| ||||| || Sbjct: 2450 atgcagatcttcgtgaagaccctgaccggcaagactatcaccctcgaggtggagtcttca 2509 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 2510 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 2569 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 2570 cagcggctcatctttgctggaaagcagcttgaggacgggcgcacgcttgccgactacaac 2629 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| |||||||||| ||||||| ||||||||||| || |||||||||||| Sbjct: 2630 atccagaaggagagcaccctccacttggtgctgcgcctcaggggaggcatgcagatcttc 2689 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||| |||||||| |||| |||||||| |||||||||||| Sbjct: 2690 gtgaagaccctgaccggcaagactatcaccctcgaggtggagtcttcagacaccatcgac 2749 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| || ||||||||||||| | | || Sbjct: 2750 aatgtcaaggccaagatccaggacaaggagggcatcccaccggaccagcagc-gtttgat 2808 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| |||||||| | |||||||||||||||| Sbjct: 2809 cttcg-ctggcaagcagctggaggatggccgcacccttgcggattacaacatccagaagg 2867 Score = 448 bits (226), Expect = e-122 Identities = 374/422 (88%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 ||||||||||||||||||| ||||| || |||||||| |||||||| ||||| ||||| | Sbjct: 1992 agatgcagatctttgtgaaaaccctgactggcaagactatcaccctcgaggtggagtcgt 2051 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 ||||||| || |||||||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 2052 ctgacaccattgacaacgttaaggccaagatccaggacaaggagggcatccccccagacc 2111 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| ||||||||||||||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 2112 agcagcggctcatctttgctggcaaacagcttgaggacgggcgcacgcttgctgactaca 2171 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||| |||||||||||| |||||||| |||||||| || |||||||||| Sbjct: 2172 acatccagaaggagagcaccctccaccttgtgctccgtctcaggggaggcatgcagatct 2231 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | ||||| ||||| ||||||||||| |||||||| |||| ||||| || |||||||| | Sbjct: 2232 ttgtgaaaaccctgaccggcaagactatcaccctcgaggtggagtcctctgacaccattg 2291 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 ||||||||||||| ||||||||||||||||||||||| || || |||||||||||| ||| Sbjct: 2292 acaacgtcaaggccaagatccaggacaaggagggcatccctccagaccagcagcgg-ctc 2350 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| ||| ||||||||||| || || || || ||||| | ||||||||||||||| Sbjct: 2351 atctttgctggg-aagcagcttgaggacgggcgcacgcttgccgactacaacatccagaa 2409 Query: 659 gg 660 || Sbjct: 2410 gg 2411 Score = 444 bits (224), Expect = e-121 Identities = 372/420 (88%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||| |||||||| ||||| ||||| || Sbjct: 2678 atgcagatcttcgtgaagaccctgaccggcaagactatcaccctcgaggtggagtcttca 2737 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 2738 gacaccatcgacaatgtcaaggccaagatccaggacaaggagggcatcccaccggaccag 2797 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| | ||||| |||||||||||||| ||||| |||||||||||||| || |||||| Sbjct: 2798 cagcgtttgatcttcgctggcaagcagctggaggatggccgcacccttgcggattacaac 2857 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2858 atccagaaggagagcaccctccacctggtgctccgtctcaggggtggtatgcagatcttt 2917 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| ||||| |||||||| |||||||| |||| ||||||||||| ||||| ||| Sbjct: 2918 gtgaagacactcactggcaagacaatcacccttgaggtggagtcttcggataccattgac 2977 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| || || |||||||||| ||||||| Sbjct: 2978 aatgtcaaggccaagatccaggacaaggagggcatcccacccgaccagcagc-gcctcat 3036 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| ||||| || | |||||||||||||||| Sbjct: 3037 cttcgcc-ggcaagcagctggaggatggccgcaccctggcggattacaacatccagaagg 3095 Score = 394 bits (199), Expect = e-106 Identities = 366/420 (87%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||| ||||| |||||||| |||||||||||||| ||||| || Sbjct: 2906 atgcagatctttgtgaagacactcactggcaagacaatcacccttgaggtggagtcttcg 2965 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || || ||||| |||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 2966 gataccattgacaatgtcaaggccaagatccaggacaaggagggcatcccacccgaccag 3025 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| || ||||||||||| ||||| ||||||||||| || || |||||| Sbjct: 3026 cagcgcctcatcttcgccggcaagcagctggaggatggccgcaccctggcggattacaac 3085 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| ||| ||||||||||||||||||||||||||||| |||||||| || Sbjct: 3086 atccagaaggagagcactctccacctggtgctccgcctcaggggtggcatgcagattttt 3145 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| | || ||||||||||||||| |||||| ||| || |||||||| ||| Sbjct: 3146 gtgaagacattgactggcaagaccatcaccttggaggtggagagctctgacaccattgac 3205 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||||||||||||||| |||||||||| | || || Sbjct: 3206 aatgtgaaggccaagatccaggacaaggagggcattcccccagaccagcagc-gtctgat 3264 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| ||||||||||||| || |||||||| || || || | ||||||||||||||||| Sbjct: 3265 ctttg-cgggcaagcagctggaggatggccgcactctcgcggactacaacatccagaagg 3323 Score = 349 bits (176), Expect = 9e-93 Identities = 360/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| ||||||||||| | || ||||||||||||||| | ||||| ||| |||| Sbjct: 3134 atgcagatttttgtgaagacattgactggcaagaccatcaccttggaggtggagagctct 3193 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| || ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 3194 gacaccattgacaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 3253 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || |||||||| ||||||||||| ||||| |||||||| || || ||||||||| Sbjct: 3254 cagcgtctgatctttgcgggcaagcagctggaggatggccgcactctcgcggactacaac 3313 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| |||||| ||||| || ||||||||||| ||||||||||||||||| Sbjct: 3314 atccagaaggagagcacccttcaccttgttctccgcctcagaggtggtatgcagatcttt 3373 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| || || || ||||| |||||||||| |||| ||||||||||||||| Sbjct: 3374 gtaaagaccctgactggaaaaaccataaccctggaggttgagagctcggacaccatcgac 3433 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||||||||||||||||||||||||||| |||||||||||||||| | || || Sbjct: 3434 aatgtgaaggcgaagatccaggacaaggagggcatccccccggaccagcagc-gtctgat 3492 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||| ||||| || |||||||| ||||| || | |||||||||||| |||| Sbjct: 3493 cttcgcc-ggcaaacagctggaggatggccgcaccctagcagactacaacatccaaaagg 3551 Score = 222 bits (112), Expect = 1e-54 Identities = 199/228 (87%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| |||||||| || || || ||||| ||||| ||||||||| ||| Sbjct: 3362 atgcagatctttgtaaagaccctgactggaaaaaccataaccctggaggttgagagctcg 3421 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 3422 gacaccatcgacaatgtgaaggcgaagatccaggacaaggagggcatccccccggaccag 3481 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| || ||||| ||||| ||||| ||||||||||| || ||||||||| Sbjct: 3482 cagcgtctgatcttcgccggcaaacagctggaggatggccgcaccctagcagactacaac 3541 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 ||||| |||||| |||||||||||| |||||||| ||| | |||||| Sbjct: 3542 atccaaaaggagagcaccctccaccttgtgctccgtctccgtggtggt 3589
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 498 bits (251), Expect = e-137 Identities = 379/420 (90%), Gaps = 2/420 (0%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||| || |||||||||||||||||||| ||||| || || ||| Sbjct: 3341559 atgcagatctttgtcaagacactgaccggcaagaccatcaccctcgaggtggaatcttct 3341500 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 3341499 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccggaccag 3341440 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||| ||||||||||||||||||||| | |||||||||||||||||| Sbjct: 3341439 cagcgtctcatctttgccggcaagcagcttgaggacggcaggacccttgctgactacaac 3341380 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| || || ||||| || ||||| |||||||| || ||||| |||||| Sbjct: 3341379 atccagaaggagtcaacgcttcaccttgtcctccgtctcaggggaggcatgcaaatcttc 3341320 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| || |||||||||||||||||||| |||| |||||||| || ||||||||| Sbjct: 3341319 gtgaagactctgaccggcaagaccatcaccctcgaggtggagtcttctgataccatcgac 3341260 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 3341259 aatgtcaaggccaagatccaggacaaggagggcattcccccggaccagcagc-gcctcat 3341201 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||| | |||||||||| ||||||||||||||||| Sbjct: 3341200 ctttg-ctggcaagcagctggaggatggcaggacccttgctgactacaacatccagaagg 3341142 Score = 494 bits (249), Expect = e-136 Identities = 382/425 (89%), Gaps = 2/425 (0%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||| || ||||||||||| |||||||||||||| ||||| ||| Sbjct: 3341787 atgcagatctttgtcaagactctgaccggcaagactatcacccttgaggtggagtcttct 3341728 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 3341727 gacaccatcgacaacgtcaaggccaagatccaggacaaagagggcatccccccagaccag 3341668 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 3341667 cagcgtctcatcttcgccggcaagcagctggaggatggcaggacccttgctgactacaac 3341608 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || ||||||||| | ||||| ||||||||||| Sbjct: 3341607 atccagaaggagtccaccctccaccttgtcctccgcctccgtggtggcatgcagatcttt 3341548 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| || |||||||||||||||||||| |||| || ||||| |||||||||||| Sbjct: 3341547 gtcaagacactgaccggcaagaccatcaccctcgaggtggaatcttctgacaccatcgac 3341488 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 3341487 aacgtcaaggccaagatccaggacaaggagggcattcccccggaccagcagc-gtctcat 3341429 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| || ||| | |||||||||| ||||||||||||||||| Sbjct: 3341428 ctttgcc-ggcaagcagcttgaggacggcaggacccttgctgactacaacatccagaagg 3341370 Query: 661 ggtca 665 |||| Sbjct: 3341369 agtca 3341365 Score = 494 bits (249), Expect = e-136 Identities = 396/444 (89%), Gaps = 2/444 (0%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| ||||| |||||||| || |||||||||||||||||||| ||||| ||||| ||| Sbjct: 3341331 atgcaaatcttcgtgaagactctgaccggcaagaccatcaccctcgaggtggagtcttct 3341272 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || |||||||| |||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 3341271 gataccatcgacaatgtcaaggccaagatccaggacaaggagggcattcccccggaccag 3341212 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||||||||||||||||||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 3341211 cagcgcctcatctttgctggcaagcagctggaggatggcaggacccttgctgactacaac 3341152 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||| Sbjct: 3341151 atccagaaggagtccaccctccaccttgtgctccgccttcgtggtggtatgcagatcttt 3341092 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| |||||||||||||||||||||| |||| ||||||||||||||| Sbjct: 3341091 gtcaagaccctcacaggcaagaccatcaccctggaggttgagagctcggacaccatcgac 3341032 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| ||||||||||||||||||||||| ||||| |||||||||| | ||||| Sbjct: 3341031 aacgtcaaggccaagatccaggacaaggagggcatccccccagaccagcagc-gtctcat 3340973 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| ||||| || | ||||||||||||||||| Sbjct: 3340972 cttcgcc-ggcaagcagctcgaggatggccgcaccctcgccgactacaacatccagaagg 3340914 Query: 661 ggtcacccctgcccctggngcttc 684 ||| |||| | ||||| ||||| Sbjct: 3340913 agtctaccctccacctggtgcttc 3340890 Score = 440 bits (222), Expect = e-120 Identities = 373/422 (88%), Gaps = 2/422 (0%) Strand = Plus / Minus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||||||||||||||| | ||||||||||| |||||||| ||||| ||||||| Sbjct: 3342017 agatgcagatctttgtgaagacattgaccggcaagactatcaccctcgaggtggagtcct 3341958 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 ||||||| ||||| || |||||||| |||||||| || |||||||||||||||||||||| Sbjct: 3341957 ctgacaccatcgataatgtcaaggctaagatccaagataaggagggcatccccccggacc 3341898 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| |||||||| |||||||||||||| ||||| ||| | |||||||||||||||| Sbjct: 3341897 agcagcgtctcatcttcgctggcaagcagctggaggatggcaggacccttgctgactaca 3341838 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||| ||||| ||||| || ||||||||| | ||||| |||||||||| Sbjct: 3341837 acatccagaaggagtcgacccttcaccttgtcctccgcctccgtggtggcatgcagatct 3341778 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | || ||||| || ||||||||||| |||||||| |||| |||||||| |||||||||| Sbjct: 3341777 ttgtcaagactctgaccggcaagactatcacccttgaggtggagtcttctgacaccatcg 3341718 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 ||||||||||||| |||||||||||||| |||||||| ||||| |||||||||| | ||| Sbjct: 3341717 acaacgtcaaggccaagatccaggacaaagagggcatccccccagaccagcagc-gtctc 3341659 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || || | | ||||||||||| || |||||| | |||||||||| ||||||||||||||| Sbjct: 3341658 atcttcgcc-ggcaagcagctggaggatggcaggacccttgctgactacaacatccagaa 3341600 Query: 659 gg 660 || Sbjct: 3341599 gg 3341598 Score = 402 bits (203), Expect = e-109 Identities = 367/420 (87%), Gaps = 2/420 (0%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| ||| Sbjct: 3341103 atgcagatctttgtcaagaccctcacaggcaagaccatcaccctggaggttgagagctcg 3341044 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 3341043 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcatccccccagaccag 3340984 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| ||||||||||| || ||||||||| Sbjct: 3340983 cagcgtctcatcttcgccggcaagcagctcgaggatggccgcaccctcgccgactacaac 3340924 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||||||||||||||| || ||| | |||||||||||||||||| Sbjct: 3340923 atccagaaggagtctaccctccacctggtgcttcgtctccgtggtggtatgcagatcttc 3340864 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | || || ||||||||||| |||||| |||| || |||||||| || Sbjct: 3340863 gtgaagaccttgactgggaagaccatcactttggaggttgagagctccgacaccattgat 3340804 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||||||||||||||| |||||||| |||||||||| | || || Sbjct: 3340803 aatgtgaaggccaagatccaggacaaggaggggattcccccagaccagcagc-gtctgat 3340745 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || ||||| || ||||| || | ||||||||||||||||| Sbjct: 3340744 cttcg-ctggcaagcagctggaggatggacgcaccctcgccgactacaacatccagaagg 3340686 Score = 214 bits (108), Expect = 4e-52 Identities = 198/228 (86%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||| | || || ||||||||||| | ||||||||| ||| Sbjct: 3340875 atgcagatcttcgtgaagaccttgactgggaagaccatcactttggaggttgagagctcc 3340816 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| |||||||||||||||||||| || ||||| |||||| Sbjct: 3340815 gacaccattgataatgtgaaggccaagatccaggacaaggaggggattcccccagaccag 3340756 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| |||||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 3340755 cagcgtctgatcttcgctggcaagcagctggaggatggacgcaccctcgccgactacaac 3340696 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 ||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 3340695 atccagaaggagtccaccctccacctggtgctccgcctccgtggtggt 3340648
>dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ9003_G05 Length = 141860 Score = 498 bits (251), Expect = e-137 Identities = 379/420 (90%), Gaps = 2/420 (0%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||| || |||||||||||||||||||| ||||| || || ||| Sbjct: 90419 atgcagatctttgtcaagacactgaccggcaagaccatcaccctcgaggtggaatcttct 90360 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 90359 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccggaccag 90300 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||| ||||||||||||||||||||| | |||||||||||||||||| Sbjct: 90299 cagcgtctcatctttgccggcaagcagcttgaggacggcaggacccttgctgactacaac 90240 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| || || ||||| || ||||| |||||||| || ||||| |||||| Sbjct: 90239 atccagaaggagtcaacgcttcaccttgtcctccgtctcaggggaggcatgcaaatcttc 90180 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| || |||||||||||||||||||| |||| |||||||| || ||||||||| Sbjct: 90179 gtgaagactctgaccggcaagaccatcaccctcgaggtggagtcttctgataccatcgac 90120 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 90119 aatgtcaaggccaagatccaggacaaggagggcattcccccggaccagcagc-gcctcat 90061 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||| | |||||||||| ||||||||||||||||| Sbjct: 90060 ctttg-ctggcaagcagctggaggatggcaggacccttgctgactacaacatccagaagg 90002 Score = 494 bits (249), Expect = e-136 Identities = 382/425 (89%), Gaps = 2/425 (0%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||| || ||||||||||| |||||||||||||| ||||| ||| Sbjct: 90647 atgcagatctttgtcaagactctgaccggcaagactatcacccttgaggtggagtcttct 90588 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 90587 gacaccatcgacaacgtcaaggccaagatccaggacaaagagggcatccccccagaccag 90528 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 90527 cagcgtctcatcttcgccggcaagcagctggaggatggcaggacccttgctgactacaac 90468 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || ||||||||| | ||||| ||||||||||| Sbjct: 90467 atccagaaggagtccaccctccaccttgtcctccgcctccgtggtggcatgcagatcttt 90408 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| || |||||||||||||||||||| |||| || ||||| |||||||||||| Sbjct: 90407 gtcaagacactgaccggcaagaccatcaccctcgaggtggaatcttctgacaccatcgac 90348 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 90347 aacgtcaaggccaagatccaggacaaggagggcattcccccggaccagcagc-gtctcat 90289 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| || ||| | |||||||||| ||||||||||||||||| Sbjct: 90288 ctttgcc-ggcaagcagcttgaggacggcaggacccttgctgactacaacatccagaagg 90230 Query: 661 ggtca 665 |||| Sbjct: 90229 agtca 90225 Score = 494 bits (249), Expect = e-136 Identities = 396/444 (89%), Gaps = 2/444 (0%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| ||||| |||||||| || |||||||||||||||||||| ||||| ||||| ||| Sbjct: 90191 atgcaaatcttcgtgaagactctgaccggcaagaccatcaccctcgaggtggagtcttct 90132 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || |||||||| |||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 90131 gataccatcgacaatgtcaaggccaagatccaggacaaggagggcattcccccggaccag 90072 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||||||||||||||||||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 90071 cagcgcctcatctttgctggcaagcagctggaggatggcaggacccttgctgactacaac 90012 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||| Sbjct: 90011 atccagaaggagtccaccctccaccttgtgctccgccttcgtggtggtatgcagatcttt 89952 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| |||||||||||||||||||||| |||| ||||||||||||||| Sbjct: 89951 gtcaagaccctcacaggcaagaccatcaccctggaggttgagagctcggacaccatcgac 89892 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| ||||||||||||||||||||||| ||||| |||||||||| | ||||| Sbjct: 89891 aacgtcaaggccaagatccaggacaaggagggcatccccccagaccagcagc-gtctcat 89833 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| ||||| || | ||||||||||||||||| Sbjct: 89832 cttcgcc-ggcaagcagctcgaggatggccgcaccctcgccgactacaacatccagaagg 89774 Query: 661 ggtcacccctgcccctggngcttc 684 ||| |||| | ||||| ||||| Sbjct: 89773 agtctaccctccacctggtgcttc 89750 Score = 440 bits (222), Expect = e-120 Identities = 373/422 (88%), Gaps = 2/422 (0%) Strand = Plus / Minus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||||||||||||||| | ||||||||||| |||||||| ||||| ||||||| Sbjct: 90877 agatgcagatctttgtgaagacattgaccggcaagactatcaccctcgaggtggagtcct 90818 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 ||||||| ||||| || |||||||| |||||||| || |||||||||||||||||||||| Sbjct: 90817 ctgacaccatcgataatgtcaaggctaagatccaagataaggagggcatccccccggacc 90758 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| |||||||| |||||||||||||| ||||| ||| | |||||||||||||||| Sbjct: 90757 agcagcgtctcatcttcgctggcaagcagctggaggatggcaggacccttgctgactaca 90698 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||| ||||| ||||| || ||||||||| | ||||| |||||||||| Sbjct: 90697 acatccagaaggagtcgacccttcaccttgtcctccgcctccgtggtggcatgcagatct 90638 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | || ||||| || ||||||||||| |||||||| |||| |||||||| |||||||||| Sbjct: 90637 ttgtcaagactctgaccggcaagactatcacccttgaggtggagtcttctgacaccatcg 90578 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 ||||||||||||| |||||||||||||| |||||||| ||||| |||||||||| | ||| Sbjct: 90577 acaacgtcaaggccaagatccaggacaaagagggcatccccccagaccagcagc-gtctc 90519 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || || | | ||||||||||| || |||||| | |||||||||| ||||||||||||||| Sbjct: 90518 atcttcgcc-ggcaagcagctggaggatggcaggacccttgctgactacaacatccagaa 90460 Query: 659 gg 660 || Sbjct: 90459 gg 90458 Score = 402 bits (203), Expect = e-109 Identities = 367/420 (87%), Gaps = 2/420 (0%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| ||| Sbjct: 89963 atgcagatctttgtcaagaccctcacaggcaagaccatcaccctggaggttgagagctcg 89904 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 89903 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcatccccccagaccag 89844 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| ||||||||||| || ||||||||| Sbjct: 89843 cagcgtctcatcttcgccggcaagcagctcgaggatggccgcaccctcgccgactacaac 89784 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||||||||||||||| || ||| | |||||||||||||||||| Sbjct: 89783 atccagaaggagtctaccctccacctggtgcttcgtctccgtggtggtatgcagatcttc 89724 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | || || ||||||||||| |||||| |||| || |||||||| || Sbjct: 89723 gtgaagaccttgactgggaagaccatcactttggaggttgagagctccgacaccattgat 89664 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||||||||||||||| |||||||| |||||||||| | || || Sbjct: 89663 aatgtgaaggccaagatccaggacaaggaggggattcccccagaccagcagc-gtctgat 89605 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || ||||| || ||||| || | ||||||||||||||||| Sbjct: 89604 cttcg-ctggcaagcagctggaggatggacgcaccctcgccgactacaacatccagaagg 89546 Score = 214 bits (108), Expect = 4e-52 Identities = 198/228 (86%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||| | || || ||||||||||| | ||||||||| ||| Sbjct: 89735 atgcagatcttcgtgaagaccttgactgggaagaccatcactttggaggttgagagctcc 89676 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| |||||||||||||||||||| || ||||| |||||| Sbjct: 89675 gacaccattgataatgtgaaggccaagatccaggacaaggaggggattcccccagaccag 89616 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| |||||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 89615 cagcgtctgatcttcgctggcaagcagctggaggatggacgcaccctcgccgactacaac 89556 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 ||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 89555 atccagaaggagtccaccctccacctggtgctccgcctccgtggtggt 89508
>dbj|AK101547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048M20, full insert sequence Length = 1642 Score = 498 bits (251), Expect = e-137 Identities = 379/420 (90%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||| || |||||||||||||||||||| ||||| || || ||| Sbjct: 539 atgcagatctttgtcaagacactgaccggcaagaccatcaccctcgaggtggaatcttct 598 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 599 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccggaccag 658 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||| ||||||||||||||||||||| | |||||||||||||||||| Sbjct: 659 cagcgtctcatctttgccggcaagcagcttgaggacggcaggacccttgctgactacaac 718 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| || || ||||| || ||||| |||||||| || ||||| |||||| Sbjct: 719 atccagaaggagtcaacgcttcaccttgtcctccgtctcaggggaggcatgcaaatcttc 778 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| || |||||||||||||||||||| |||| |||||||| || ||||||||| Sbjct: 779 gtgaagactctgaccggcaagaccatcaccctcgaggtggagtcttctgataccatcgac 838 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 839 aatgtcaaggccaagatccaggacaaggagggcattcccccggaccagcagc-gcctcat 897 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||| | |||||||||| ||||||||||||||||| Sbjct: 898 ctttg-ctggcaagcagctggaggatggcaggacccttgctgactacaacatccagaagg 956 Score = 494 bits (249), Expect = e-136 Identities = 396/444 (89%), Gaps = 2/444 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| ||||| |||||||| || |||||||||||||||||||| ||||| ||||| ||| Sbjct: 767 atgcaaatcttcgtgaagactctgaccggcaagaccatcaccctcgaggtggagtcttct 826 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || |||||||| |||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 827 gataccatcgacaatgtcaaggccaagatccaggacaaggagggcattcccccggaccag 886 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||||||||||||||||||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 887 cagcgcctcatctttgctggcaagcagctggaggatggcaggacccttgctgactacaac 946 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||| Sbjct: 947 atccagaaggagtccaccctccaccttgtgctccgccttcgtggtggtatgcagatcttt 1006 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| |||||||||||||||||||||| |||| ||||||||||||||| Sbjct: 1007 gtcaagaccctcacaggcaagaccatcaccctggaggttgagagctcggacaccatcgac 1066 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| ||||||||||||||||||||||| ||||| |||||||||| | ||||| Sbjct: 1067 aacgtcaaggccaagatccaggacaaggagggcatccccccagaccagcagc-gtctcat 1125 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| ||||| || | ||||||||||||||||| Sbjct: 1126 cttcgcc-ggcaagcagctcgaggatggccgcaccctcgccgactacaacatccagaagg 1184 Query: 661 ggtcacccctgcccctggngcttc 684 ||| |||| | ||||| ||||| Sbjct: 1185 agtctaccctccacctggtgcttc 1208 Score = 494 bits (249), Expect = e-136 Identities = 382/425 (89%), Gaps = 2/425 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||| || ||||||||||| |||||||||||||| ||||| ||| Sbjct: 311 atgcagatctttgtcaagactctgaccggcaagactatcacccttgaggtggagtcttct 370 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 371 gacaccatcgacaacgtcaaggccaagatccaggacaaagagggcatccccccagaccag 430 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 431 cagcgtctcatcttcgccggcaagcagctggaggatggcaggacccttgctgactacaac 490 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || ||||||||| | ||||| ||||||||||| Sbjct: 491 atccagaaggagtccaccctccaccttgtcctccgcctccgtggtggcatgcagatcttt 550 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| || |||||||||||||||||||| |||| || ||||| |||||||||||| Sbjct: 551 gtcaagacactgaccggcaagaccatcaccctcgaggtggaatcttctgacaccatcgac 610 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 611 aacgtcaaggccaagatccaggacaaggagggcattcccccggaccagcagc-gtctcat 669 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| || ||| | |||||||||| ||||||||||||||||| Sbjct: 670 ctttgcc-ggcaagcagcttgaggacggcaggacccttgctgactacaacatccagaagg 728 Query: 661 ggtca 665 |||| Sbjct: 729 agtca 733 Score = 440 bits (222), Expect = e-120 Identities = 373/422 (88%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||||||||||||||| | ||||||||||| |||||||| ||||| ||||||| Sbjct: 81 agatgcagatctttgtgaagacattgaccggcaagactatcaccctcgaggtggagtcct 140 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 ||||||| ||||| || |||||||| |||||||| || |||||||||||||||||||||| Sbjct: 141 ctgacaccatcgataatgtcaaggctaagatccaagataaggagggcatccccccggacc 200 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| |||||||| |||||||||||||| ||||| ||| | |||||||||||||||| Sbjct: 201 agcagcgtctcatcttcgctggcaagcagctggaggatggcaggacccttgctgactaca 260 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||| ||||| ||||| || ||||||||| | ||||| |||||||||| Sbjct: 261 acatccagaaggagtcgacccttcaccttgtcctccgcctccgtggtggcatgcagatct 320 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | || ||||| || ||||||||||| |||||||| |||| |||||||| |||||||||| Sbjct: 321 ttgtcaagactctgaccggcaagactatcacccttgaggtggagtcttctgacaccatcg 380 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 ||||||||||||| |||||||||||||| |||||||| ||||| |||||||||| | ||| Sbjct: 381 acaacgtcaaggccaagatccaggacaaagagggcatccccccagaccagcagc-gtctc 439 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || || | | ||||||||||| || |||||| | |||||||||| ||||||||||||||| Sbjct: 440 atcttcgcc-ggcaagcagctggaggatggcaggacccttgctgactacaacatccagaa 498 Query: 659 gg 660 || Sbjct: 499 gg 500 Score = 402 bits (203), Expect = e-109 Identities = 367/420 (87%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| ||| Sbjct: 995 atgcagatctttgtcaagaccctcacaggcaagaccatcaccctggaggttgagagctcg 1054 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1055 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcatccccccagaccag 1114 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| ||||||||||| || ||||||||| Sbjct: 1115 cagcgtctcatcttcgccggcaagcagctcgaggatggccgcaccctcgccgactacaac 1174 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||||||||||||||| || ||| | |||||||||||||||||| Sbjct: 1175 atccagaaggagtctaccctccacctggtgcttcgtctccgtggtggtatgcagatcttc 1234 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | || || ||||||||||| |||||| |||| || |||||||| || Sbjct: 1235 gtgaagaccttgactgggaagaccatcactttggaggttgagagctccgacaccattgat 1294 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||||||||||||||| |||||||| |||||||||| | || || Sbjct: 1295 aatgtgaaggccaagatccaggacaaggaggggattcccccagaccagcagc-gtctgat 1353 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || ||||| || ||||| || | ||||||||||||||||| Sbjct: 1354 cttcg-ctggcaagcagctggaggatggacgcaccctcgccgactacaacatccagaagg 1412 Score = 214 bits (108), Expect = 4e-52 Identities = 198/228 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||| | || || ||||||||||| | ||||||||| ||| Sbjct: 1223 atgcagatcttcgtgaagaccttgactgggaagaccatcactttggaggttgagagctcc 1282 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| |||||||||||||||||||| || ||||| |||||| Sbjct: 1283 gacaccattgataatgtgaaggccaagatccaggacaaggaggggattcccccagaccag 1342 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| |||||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 1343 cagcgtctgatcttcgctggcaagcagctggaggatggacgcaccctcgccgactacaac 1402 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 ||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 1403 atccagaaggagtccaccctccacctggtgctccgcctccgtggtggt 1450
>dbj|AK061956.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F08, full insert sequence Length = 1640 Score = 498 bits (251), Expect = e-137 Identities = 379/420 (90%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||| || |||||||||||||||||||| ||||| || || ||| Sbjct: 536 atgcagatctttgtcaagacactgaccggcaagaccatcaccctcgaggtggaatcttct 595 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 596 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccggaccag 655 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||| ||||||||||||||||||||| | |||||||||||||||||| Sbjct: 656 cagcgtctcatctttgccggcaagcagcttgaggacggcaggacccttgctgactacaac 715 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| || || ||||| || ||||| |||||||| || ||||| |||||| Sbjct: 716 atccagaaggagtcaacgcttcaccttgtcctccgtctcaggggaggcatgcaaatcttc 775 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| || |||||||||||||||||||| |||| |||||||| || ||||||||| Sbjct: 776 gtgaagactctgaccggcaagaccatcaccctcgaggtggagtcttctgataccatcgac 835 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 836 aatgtcaaggccaagatccaggacaaggagggcattcccccggaccagcagc-gcctcat 894 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||| | |||||||||| ||||||||||||||||| Sbjct: 895 ctttg-ctggcaagcagctggaggatggcaggacccttgctgactacaacatccagaagg 953 Score = 494 bits (249), Expect = e-136 Identities = 396/444 (89%), Gaps = 2/444 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| ||||| |||||||| || |||||||||||||||||||| ||||| ||||| ||| Sbjct: 764 atgcaaatcttcgtgaagactctgaccggcaagaccatcaccctcgaggtggagtcttct 823 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || |||||||| |||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 824 gataccatcgacaatgtcaaggccaagatccaggacaaggagggcattcccccggaccag 883 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||||||||||||||||||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 884 cagcgcctcatctttgctggcaagcagctggaggatggcaggacccttgctgactacaac 943 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||| Sbjct: 944 atccagaaggagtccaccctccaccttgtgctccgccttcgtggtggtatgcagatcttt 1003 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| |||||||||||||||||||||| |||| ||||||||||||||| Sbjct: 1004 gtcaagaccctcacaggcaagaccatcaccctggaggttgagagctcggacaccatcgac 1063 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| ||||||||||||||||||||||| ||||| |||||||||| | ||||| Sbjct: 1064 aacgtcaaggccaagatccaggacaaggagggcatccccccagaccagcagc-gtctcat 1122 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| ||||| || | ||||||||||||||||| Sbjct: 1123 cttcgcc-ggcaagcagctcgaggatggccgcaccctcgccgactacaacatccagaagg 1181 Query: 661 ggtcacccctgcccctggngcttc 684 ||| |||| | ||||| ||||| Sbjct: 1182 agtctaccctccacctggtgcttc 1205 Score = 486 bits (245), Expect = e-134 Identities = 381/425 (89%), Gaps = 2/425 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||| || ||||||||||| |||||||||||||| ||||| ||| Sbjct: 308 atgcagatctttgtcaagactctgaccggcaagactatcacccttgaggtggagtcttct 367 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct: 368 gacaccatcgacaacgtcaaggccaagatccaggacaaagagggcacccccccagaccag 427 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| ||| | |||||||||||||||||| Sbjct: 428 cagcgtctcatcttcgccggcaagcagctggaggatggcaggacccttgctgactacaac 487 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || ||||||||| | ||||| ||||||||||| Sbjct: 488 atccagaaggagtccaccctccaccttgtcctccgcctccgtggtggcatgcagatcttt 547 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| || |||||||||||||||||||| |||| || ||||| |||||||||||| Sbjct: 548 gtcaagacactgaccggcaagaccatcaccctcgaggtggaatcttctgacaccatcgac 607 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 608 aacgtcaaggccaagatccaggacaaggagggcattcccccggaccagcagc-gtctcat 666 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| || ||| | |||||||||| ||||||||||||||||| Sbjct: 667 ctttgcc-ggcaagcagcttgaggacggcaggacccttgctgactacaacatccagaagg 725 Query: 661 ggtca 665 |||| Sbjct: 726 agtca 730 Score = 432 bits (218), Expect = e-118 Identities = 372/422 (88%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||||||||||||||| | ||||||||||| |||||||| ||||| ||||||| Sbjct: 78 agatgcagatctttgtgaagacattgaccggcaagactatcaccctcgaggtggagtcct 137 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 ||||||| ||||| || |||||||| |||||||| || |||||||||||||||||||||| Sbjct: 138 ctgacaccatcgataatgtcaaggctaagatccaagataaggagggcatccccccggacc 197 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| |||||||| |||||||||||||| ||||| ||| | |||||||||||||||| Sbjct: 198 agcagcgtctcatcttcgctggcaagcagctggaggatggcaggacccttgctgactaca 257 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||| ||||| ||||| || ||||||||| | ||||| |||||||||| Sbjct: 258 acatccagaaggagtcgacccttcaccttgtcctccgcctccgtggtggcatgcagatct 317 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | || ||||| || ||||||||||| |||||||| |||| |||||||| |||||||||| Sbjct: 318 ttgtcaagactctgaccggcaagactatcacccttgaggtggagtcttctgacaccatcg 377 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 ||||||||||||| |||||||||||||| ||||||| ||||| |||||||||| | ||| Sbjct: 378 acaacgtcaaggccaagatccaggacaaagagggcacccccccagaccagcagc-gtctc 436 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || || | | ||||||||||| || |||||| | |||||||||| ||||||||||||||| Sbjct: 437 atcttcgcc-ggcaagcagctggaggatggcaggacccttgctgactacaacatccagaa 495 Query: 659 gg 660 || Sbjct: 496 gg 497 Score = 402 bits (203), Expect = e-109 Identities = 367/420 (87%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| ||| Sbjct: 992 atgcagatctttgtcaagaccctcacaggcaagaccatcaccctggaggttgagagctcg 1051 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1052 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcatccccccagaccag 1111 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| ||||||||||| || ||||||||| Sbjct: 1112 cagcgtctcatcttcgccggcaagcagctcgaggatggccgcaccctcgccgactacaac 1171 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||||||||||||||| || ||| | |||||||||||||||||| Sbjct: 1172 atccagaaggagtctaccctccacctggtgcttcgtctccgtggtggtatgcagatcttc 1231 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | || || ||||||||||| |||||| |||| || |||||||| || Sbjct: 1232 gtgaagaccttgactgggaagaccatcactttggaggttgagagctccgacaccattgat 1291 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||||||||||||||| |||||||| |||||||||| | || || Sbjct: 1292 aatgtgaaggccaagatccaggacaaggaggggattcccccagaccagcagc-gtctgat 1350 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || ||||| || ||||| || | ||||||||||||||||| Sbjct: 1351 cttcg-ctggcaagcagctggaggatggacgcaccctcgccgactacaacatccagaagg 1409 Score = 214 bits (108), Expect = 4e-52 Identities = 198/228 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||| | || || ||||||||||| | ||||||||| ||| Sbjct: 1220 atgcagatcttcgtgaagaccttgactgggaagaccatcactttggaggttgagagctcc 1279 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| |||||||||||||||||||| || ||||| |||||| Sbjct: 1280 gacaccattgataatgtgaaggccaagatccaggacaaggaggggattcccccagaccag 1339 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| |||||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 1340 cagcgtctgatcttcgctggcaagcagctggaggatggacgcaccctcgccgactacaac 1399 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 ||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 1400 atccagaaggagtccaccctccacctggtgctccgcctccgtggtggt 1447
>gb|BT018032.1| Zea mays clone EL01N0530D02.c mRNA sequence Length = 1238 Score = 482 bits (243), Expect = e-132 Identities = 377/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||| ||||| ||||||||||| |||||||| ||||| ||||||||| Sbjct: 300 atgcagatctttgtgaaaaccctgaccggcaagactatcaccctcgaggtggagtcctct 359 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || |||||||||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 360 gacaccattgacaacgtcaaggccaagatccaggacaaggagggcatccctccagaccag 419 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 420 cagcggctcatctttgctgggaagcagcttgaggacgggcgcacgcttgccgactacaac 479 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| |||||||||| ||||||| ||||||||||| || |||||||||||| Sbjct: 480 atccagaaggagagcaccctccacttggtgctgcgcctcaggggaggcatgcagatcttc 539 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||| || |||||||| |||| |||||||| |||||||||||| Sbjct: 540 gtgaagaccctgaccggcaaaactatcaccctcgaggtggagtcttcagacaccatcgac 599 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 600 aacgtcaaggccaagatccaggacaaggagggcattcccccagaccagcagcgg-ctcat 658 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | || ||||||||||| || || || || || || | ||||||||||||||||| Sbjct: 659 ctttg-ctggaaagcagcttgaggacgggcgcacgctggccgactacaacatccagaagg 717 Score = 448 bits (226), Expect = e-122 Identities = 374/422 (88%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 ||||||||||||||||||| ||||| ||||||||||| |||||||| |||| ||||| | Sbjct: 70 agatgcagatctttgtgaaaaccctgaccggcaagactatcaccctccaggtggagtcgt 129 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 ||||||| || |||||||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 130 ctgacaccattgacaacgttaaggccaagatccaggacaaggagggcatccccccagacc 189 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| |||||||| |||||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 190 agcagcggctcatcttcgctggcaaacagcttgaggacgggcgcacgcttgctgactaca 249 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||| |||||||||||| ||||||||||||||||| || |||||||||| Sbjct: 250 acatccagaaggagagcaccctccaccttgtgctccgcctcaggggaggcatgcagatct 309 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | ||||| ||||| ||||||||||| |||||||| |||| ||||| || |||||||| | Sbjct: 310 ttgtgaaaaccctgaccggcaagactatcaccctcgaggtggagtcctctgacaccattg 369 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 ||||||||||||| ||||||||||||||||||||||| || || |||||||||||| ||| Sbjct: 370 acaacgtcaaggccaagatccaggacaaggagggcatccctccagaccagcagcgg-ctc 428 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| ||| ||||||||||| || || || || ||||| | ||||||||||||||| Sbjct: 429 atctttgctggg-aagcagcttgaggacgggcgcacgcttgccgactacaacatccagaa 487 Query: 659 gg 660 || Sbjct: 488 gg 489 Score = 398 bits (201), Expect = e-107 Identities = 315/353 (89%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||| || Sbjct: 528 atgcagatcttcgtgaagaccctgaccggcaaaactatcaccctcgaggtggagtcttca 587 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 588 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 647 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||||||||| ||||||||||||||||| ||||| || || ||||||||| Sbjct: 648 cagcggctcatctttgctggaaagcagcttgaggacgggcgcacgctggccgactacaac 707 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| ||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 708 atccagaaggagagtacccttcaccttgttctccgcctcaggggtggtatgcagatcttt 767 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || || || ||||| ||||||||| |||| ||||||||||||||| Sbjct: 768 gtgaagaccctgactggaaaaaccatacccctggaggttgagagctcggacaccatcgac 827 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcg 593 || || ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 828 aatgtgaaggcgaagatccaggacaaggagggcatccccccggaccagcagcg 880 Score = 198 bits (100), Expect = 2e-47 Identities = 196/228 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || || || ||||| |||| ||||||||| ||| Sbjct: 756 atgcagatctttgtgaagaccctgactggaaaaaccatacccctggaggttgagagctcg 815 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gacaccatcgacaatgtgaaggcgaagatccaggacaaggagggcatccccccggaccag 875 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| || ||||| ||||| ||||| |||||| || | || ||||||||| Sbjct: 876 cagcgtctgatcttcgccggcaaacagctggaggatggccgccccttagcagactacaac 935 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 ||||| |||||| |||||||| ||| |||||||| ||| | |||||| Sbjct: 936 atccaaaaggagagcaccctcccccttgtgctccgtctccgtggtggt 983
>ref|XM_473982.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1146 Score = 474 bits (239), Expect = e-130 Identities = 376/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || |||||||| |||||| | ||||||||||||||| Sbjct: 457 atgcagatctttgtgaagacccttactggcaagacgatcaccttggaggttgagtcctct 516 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||||||||| || ||||| |||||||||||||||||||| || || || |||||| Sbjct: 517 gacacgatcgacaatgtgaaggccaagatccaggacaaggagggtattccaccagaccag 576 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 577 cagcggctcatcttcgctggcaagcagcttgaggacggccgcacccttgctgactataac 636 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||| | ||| |||| |||||||| | || ||||||||||||||| Sbjct: 637 atccagaaggagtccaccttgcacttggtcctccgccttcgtggaggtatgcagatcttc 696 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||||||||||||||||||||||||||||| |||||| || ||||| |||||| Sbjct: 697 gtgaagaccctcaccggcaagaccatcaccctggaggttgagtcgtctgacacgatcgac 756 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||||||||||||||| ||||| || |||||||||| ||||||| Sbjct: 757 aatgtgaaggccaagatccaggacaaggagggtattccaccagaccagcagc-gcctcat 815 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | |||||||||||||| ||||| || |||||||| | |||||||||||||||| Sbjct: 816 cttcg-ctggcaagcagcttgaggatggtcgcacccttgcagattacaacatccagaagg 874 Score = 468 bits (236), Expect = e-128 Identities = 375/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 685 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggaggttgagtcgtct 744 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||||||||| || ||||| |||||||||||||||||||| || || || |||||| Sbjct: 745 gacacgatcgacaatgtgaaggccaagatccaggacaaggagggtattccaccagaccag 804 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| |||||||||||||||||||| || ||||||||||| || |||||| Sbjct: 805 cagcgcctcatcttcgctggcaagcagcttgaggatggtcgcacccttgcagattacaac 864 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| ||||| || || ||||| | || ||||||||||||||| Sbjct: 865 atccagaaggagtccaccctgcaccttgtcctgcgccttcgtggaggtatgcagatcttc 924 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||||||||| |||||||||||||| ||||||| |||||| || |||||||||||| Sbjct: 925 gtgaagaccctcactggcaagaccatcactctggaggttgagtcctctgacaccatcgac 984 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||||||||| || || |||||||||| ||||||| Sbjct: 985 aacgtgaaggccaagatccaggataaggagggcatccctccagaccagcagc-gcctcat 1043 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| |||||||| | ||| ||||||||||||| Sbjct: 1044 cttcgcc-ggcaagcagctcgaggatggccgcacccttgccgactataacatccagaagg 1102 Score = 410 bits (207), Expect = e-111 Identities = 359/408 (87%), Gaps = 2/408 (0%) Strand = Plus / Plus Query: 253 gtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctctgacacgatcgac 312 |||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 241 gtgaagaccctcaccggcaagaccattaccctggaggtcgagtcctccgacacgatcgat 300 Query: 313 aacgtcaaggcgaagatccaggacaaggagggcatccccccggaccagcagcgcctcatc 372 || || ||||| |||||||||||||||||||| ||||| || ||||||||||| |||||| Sbjct: 301 aatgtgaaggccaagatccaggacaaggagggaatcccaccagaccagcagcgtctcatc 360 Query: 373 tttgctggcaagcagcttgaggacggccgcacccttgctgactacaacatccagaaggag 432 |||||||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 361 tttgctgggaagcagctcgaggatggccgcacccttgcagactacaacatccaaaaggaa 420 Query: 433 tccaccctccacctggtgctccgcctcaggggtggtatgcagatcttcgtgaagaccctc 492 |||||||| ||||| || || |||||| |||| |||||||||||||| ||||||||||| Sbjct: 421 tccaccctgcaccttgtcctgcgcctccggggcggtatgcagatctttgtgaagaccctt 480 Query: 493 accggcaagaccatcaccctggagggtgagtcttcggacaccatcgacaacgtcaaggcg 552 || |||||||| |||||| |||||| |||||| || ||||| |||||||| || ||||| Sbjct: 481 actggcaagacgatcaccttggaggttgagtcctctgacacgatcgacaatgtgaaggcc 540 Query: 553 aagatccaggacaaggagggcattcccccggaccagcagcggcctcatntttgncgggca 612 |||||||||||||||||||| ||||| || |||||||||||| ||||| || | | |||| Sbjct: 541 aagatccaggacaaggagggtattccaccagaccagcagcgg-ctcatcttcg-ctggca 598 Query: 613 agcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||||||||| || ||||| |||||||||| ||| ||||||||||||| Sbjct: 599 agcagcttgaggacggccgcacccttgctgactataacatccagaagg 646 Score = 325 bits (164), Expect = 1e-85 Identities = 357/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| || || ||||||||||| ||||||||||||||| | |||||||||| ||| Sbjct: 1 atgcagatattcgttaagaccctcactggcaagaccatcaccttggaggttgagttctcc 60 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || ||||| ||||| || ||||| ||||| |||||||||||||||||||| ||||||||| Sbjct: 61 gatacgattgacaatgtgaaggctaagattcaggacaaggagggcatccctccggaccag 120 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 || ||||| ||||| |||||||||||||||||||| || || || || || || || ||| Sbjct: 121 caacgccttatcttcgctggcaagcagcttgaggatgggcgtactctcgcggattataac 180 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||| | ||||| || |||||||| | || || ||||| || ||| Sbjct: 181 atccagaaggagtccaccttgcaccttgtcctccgccttcgtggaggcatgcaaatattc 240 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||||||||||||||||||||| |||||||||| ||||| || ||||| ||||| Sbjct: 241 gtgaagaccctcaccggcaagaccattaccctggaggtcgagtcctccgacacgatcgat 300 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||||||||||||||| || || || |||||||||| | ||||| Sbjct: 301 aatgtgaaggccaagatccaggacaaggagggaatcccaccagaccagcagc-gtctcat 359 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| ||| |||||||| || |||||||| |||||||| | |||||||||||| |||| Sbjct: 360 ctttgctggg-aagcagctcgaggatggccgcacccttgcagactacaacatccaaaagg 418 Score = 278 bits (140), Expect = 3e-71 Identities = 206/228 (90%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 913 atgcagatcttcgtgaagaccctcactggcaagaccatcactctggaggttgagtcctct 972 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||| ||||| ||||||||||| |||||||||||||| || |||||| Sbjct: 973 gacaccatcgacaacgtgaaggccaagatccaggataaggagggcatccctccagaccag 1032 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| || ||||||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 1033 cagcgcctcatcttcgccggcaagcagctcgaggatggccgcacccttgccgactataac 1092 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 |||||||||||||||||||| ||||| || || |||||| | |||||| Sbjct: 1093 atccagaaggagtccaccctgcaccttgtcctgcgcctccgtggtggt 1140
>gb|BT016494.1| Zea mays clone Contig327 mRNA sequence Length = 974 Score = 474 bits (239), Expect = e-130 Identities = 376/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||| ||||| ||||||||||| |||||||| ||||| ||||||||| Sbjct: 296 atgcagatctttgtgaaaaccctgaccggcaagactatcaccctcgaggtggagtcctct 355 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || |||||||||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 356 gacaccattgacaacgtcaaggccaagatccaggacaaggagggcatccctccagaccag 415 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 416 cagcggctcatctttgctgggaagcagcttgaggacgggcgcacgcttgccgactacaac 475 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| |||||||||| ||||||| ||||||||||| || |||||||||||| Sbjct: 476 atccagaaggagagcaccctccacttggtgctgcgcctcaggggaggcatgcagatcttc 535 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||| || |||||||| |||| |||||||| |||||||||||| Sbjct: 536 gtgaagaccctgaccggcaaaactatcaccctcgaggtggagtcttcagacaccatcgac 595 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 596 aacgtcaaggccaagatccaggacaaggagggcattcccccagaccagcagcgg-ctcat 654 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | || ||||||||||| || || || || || || | |||||||||||| |||| Sbjct: 655 ctttg-ctggaaagcagcttgaggacgggcgcacgctggccgactacaacatccaaaagg 713 Score = 442 bits (223), Expect = e-121 Identities = 375/423 (88%), Gaps = 3/423 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcac-ccttgaggttgagtcc 297 ||||||||||||||||||| ||||| ||||||||||| ||||| ||| ||||| ||||| Sbjct: 65 agatgcagatctttgtgaaaaccctgaccggcaagactatcactcctcgaggtggagtcg 124 Query: 298 tctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggac 357 |||||||| || |||||||| ||||| ||||||||||||||||||||||||||||| ||| Sbjct: 125 tctgacaccattgacaacgttaaggccaagatccaggacaaggagggcatccccccagac 184 Query: 358 cagcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactac 417 |||||||| |||||||| |||||||| |||||||||||||| ||||| |||||||||||| Sbjct: 185 cagcagcggctcatcttcgctggcaaacagcttgaggacgggcgcacgcttgctgactac 244 Query: 418 aacatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatc 477 ||||||||||||||| |||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 245 aacatccagaaggagagcaccctccaccttgtgctccgcctcaggggaggcatgcagatc 304 Query: 478 ttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatc 537 || ||||| ||||| ||||||||||| |||||||| |||| ||||| || |||||||| Sbjct: 305 tttgtgaaaaccctgaccggcaagactatcaccctcgaggtggagtcctctgacaccatt 364 Query: 538 gacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcct 597 |||||||||||||| ||||||||||||||||||||||| || || |||||||||||| || Sbjct: 365 gacaacgtcaaggccaagatccaggacaaggagggcatccctccagaccagcagcgg-ct 423 Query: 598 catntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccaga 657 ||| |||| ||| ||||||||||| || || || || ||||| | |||||||||||||| Sbjct: 424 catctttgctggg-aagcagcttgaggacgggcgcacgcttgccgactacaacatccaga 482 Query: 658 agg 660 ||| Sbjct: 483 agg 485 Score = 262 bits (132), Expect = 2e-66 Identities = 204/228 (89%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||| || Sbjct: 524 atgcagatcttcgtgaagaccctgaccggcaaaactatcaccctcgaggtggagtcttca 583 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 584 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 643 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||||||||| ||||||||||||||||| ||||| || || ||||||||| Sbjct: 644 cagcggctcatctttgctggaaagcagcttgaggacgggcgcacgctggccgactacaac 703 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 ||||| |||||| ||||||||||||||||||||| ||| | |||||| Sbjct: 704 atccaaaaggagagcaccctccacctggtgctccgtctccgtggtggt 751
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 474 bits (239), Expect = e-130 Identities = 376/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || |||||||| |||||| | ||||||||||||||| Sbjct: 31998127 atgcagatctttgtgaagacccttactggcaagacgatcaccttggaggttgagtcctct 31998186 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||||||||| || ||||| |||||||||||||||||||| || || || |||||| Sbjct: 31998187 gacacgatcgacaatgtgaaggccaagatccaggacaaggagggtattccaccagaccag 31998246 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 31998247 cagcggctcatcttcgctggcaagcagcttgaggacggccgcacccttgctgactataac 31998306 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||| | ||| |||| |||||||| | || ||||||||||||||| Sbjct: 31998307 atccagaaggagtccaccttgcacttggtcctccgccttcgtggaggtatgcagatcttc 31998366 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||||||||||||||||||||||||||||| |||||| || ||||| |||||| Sbjct: 31998367 gtgaagaccctcaccggcaagaccatcaccctggaggttgagtcgtctgacacgatcgac 31998426 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||||||||||||||| ||||| || |||||||||| ||||||| Sbjct: 31998427 aatgtgaaggccaagatccaggacaaggagggtattccaccagaccagcagc-gcctcat 31998485 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | |||||||||||||| ||||| || |||||||| | |||||||||||||||| Sbjct: 31998486 cttcg-ctggcaagcagcttgaggatggtcgcacccttgcagattacaacatccagaagg 31998544 Score = 468 bits (236), Expect = e-128 Identities = 375/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 31998355 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggaggttgagtcgtct 31998414 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||||||||| || ||||| |||||||||||||||||||| || || || |||||| Sbjct: 31998415 gacacgatcgacaatgtgaaggccaagatccaggacaaggagggtattccaccagaccag 31998474 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| |||||||||||||||||||| || ||||||||||| || |||||| Sbjct: 31998475 cagcgcctcatcttcgctggcaagcagcttgaggatggtcgcacccttgcagattacaac 31998534 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| ||||| || || ||||| | || ||||||||||||||| Sbjct: 31998535 atccagaaggagtccaccctgcaccttgtcctgcgccttcgtggaggtatgcagatcttc 31998594 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||||||||| |||||||||||||| ||||||| |||||| || |||||||||||| Sbjct: 31998595 gtgaagaccctcactggcaagaccatcactctggaggttgagtcctctgacaccatcgac 31998654 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||||||||| || || |||||||||| ||||||| Sbjct: 31998655 aacgtgaaggccaagatccaggataaggagggcatccctccagaccagcagc-gcctcat 31998713 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| |||||||| | ||| ||||||||||||| Sbjct: 31998714 cttcgcc-ggcaagcagctcgaggatggccgcacccttgccgactataacatccagaagg 31998772 Score = 410 bits (207), Expect = e-111 Identities = 359/408 (87%), Gaps = 2/408 (0%) Strand = Plus / Plus Query: 253 gtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctctgacacgatcgac 312 |||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 31997911 gtgaagaccctcaccggcaagaccattaccctggaggtcgagtcctccgacacgatcgat 31997970 Query: 313 aacgtcaaggcgaagatccaggacaaggagggcatccccccggaccagcagcgcctcatc 372 || || ||||| |||||||||||||||||||| ||||| || ||||||||||| |||||| Sbjct: 31997971 aatgtgaaggccaagatccaggacaaggagggaatcccaccagaccagcagcgtctcatc 31998030 Query: 373 tttgctggcaagcagcttgaggacggccgcacccttgctgactacaacatccagaaggag 432 |||||||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 31998031 tttgctgggaagcagctcgaggatggccgcacccttgcagactacaacatccaaaaggaa 31998090 Query: 433 tccaccctccacctggtgctccgcctcaggggtggtatgcagatcttcgtgaagaccctc 492 |||||||| ||||| || || |||||| |||| |||||||||||||| ||||||||||| Sbjct: 31998091 tccaccctgcaccttgtcctgcgcctccggggcggtatgcagatctttgtgaagaccctt 31998150 Query: 493 accggcaagaccatcaccctggagggtgagtcttcggacaccatcgacaacgtcaaggcg 552 || |||||||| |||||| |||||| |||||| || ||||| |||||||| || ||||| Sbjct: 31998151 actggcaagacgatcaccttggaggttgagtcctctgacacgatcgacaatgtgaaggcc 31998210 Query: 553 aagatccaggacaaggagggcattcccccggaccagcagcggcctcatntttgncgggca 612 |||||||||||||||||||| ||||| || |||||||||||| ||||| || | | |||| Sbjct: 31998211 aagatccaggacaaggagggtattccaccagaccagcagcgg-ctcatcttcg-ctggca 31998268 Query: 613 agcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||||||||| || ||||| |||||||||| ||| ||||||||||||| Sbjct: 31998269 agcagcttgaggacggccgcacccttgctgactataacatccagaagg 31998316 Score = 329 bits (166), Expect = 9e-87 Identities = 359/422 (85%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||| || || ||||||||||| ||||||||||||||| | |||||||||| || Sbjct: 31997669 agatgcagatattcgttaagaccctcactggcaagaccatcaccttggaggttgagttct 31997728 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 | || ||||| ||||| || ||||| ||||| |||||||||||||||||||| ||||||| Sbjct: 31997729 ccgatacgattgacaatgtgaaggctaagattcaggacaaggagggcatccctccggacc 31997788 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 |||| ||||| ||||| |||||||||||||||||||| || || || || || || || | Sbjct: 31997789 agcaacgccttatcttcgctggcaagcagcttgaggatgggcgtactctcgcggattata 31997848 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||||||| | ||||| || |||||||| | || || ||||| || | Sbjct: 31997849 acatccagaaggagtccaccttgcaccttgtcctccgccttcgtggaggcatgcaaatat 31997908 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 |||||||||||||||||||||||||||| |||||||||| ||||| || ||||| |||| Sbjct: 31997909 tcgtgaagaccctcaccggcaagaccattaccctggaggtcgagtcctccgacacgatcg 31997968 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 | || || ||||| |||||||||||||||||||| || || || |||||||||| | ||| Sbjct: 31997969 ataatgtgaaggccaagatccaggacaaggagggaatcccaccagaccagcagc-gtctc 31998027 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| ||| |||||||| || |||||||| |||||||| | |||||||||||| || Sbjct: 31998028 atctttgctggg-aagcagctcgaggatggccgcacccttgcagactacaacatccaaaa 31998086 Query: 659 gg 660 || Sbjct: 31998087 gg 31998088 Score = 278 bits (140), Expect = 3e-71 Identities = 206/228 (90%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 31998583 atgcagatcttcgtgaagaccctcactggcaagaccatcactctggaggttgagtcctct 31998642 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||| ||||| ||||||||||| |||||||||||||| || |||||| Sbjct: 31998643 gacaccatcgacaacgtgaaggccaagatccaggataaggagggcatccctccagaccag 31998702 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| || ||||||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 31998703 cagcgcctcatcttcgccggcaagcagctcgaggatggccgcacccttgccgactataac 31998762 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 |||||||||||||||||||| ||||| || || |||||| | |||||| Sbjct: 31998763 atccagaaggagtccaccctgcaccttgtcctgcgcctccgtggtggt 31998810
>dbj|AK102389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092E11, full insert sequence Length = 2497 Score = 474 bits (239), Expect = e-130 Identities = 376/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || |||||||| |||||| | ||||||||||||||| Sbjct: 1666 atgcagatctttgtgaagacccttactggcaagacgatcaccttggaggttgagtcctct 1725 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||||||||| || ||||| |||||||||||||||||||| || || || |||||| Sbjct: 1726 gacacgatcgacaatgtgaaggccaagatccaggacaaggagggtattccaccagaccag 1785 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1786 cagcggctcatcttcgctggcaagcagcttgaggacggccgcacccttgctgactataac 1845 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||| | ||| |||| |||||||| | || ||||||||||||||| Sbjct: 1846 atccagaaggagtccaccttgcacttggtcctccgccttcgtggaggtatgcagatcttc 1905 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||||||||||||||||||||||||||||| |||||| || ||||| |||||| Sbjct: 1906 gtgaagaccctcaccggcaagaccatcaccctggaggttgagtcgtctgacacgatcgac 1965 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||||||||||||||| ||||| || |||||||||| ||||||| Sbjct: 1966 aatgtgaaggccaagatccaggacaaggagggtattccaccagaccagcagc-gcctcat 2024 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | |||||||||||||| ||||| || |||||||| | |||||||||||||||| Sbjct: 2025 cttcg-ctggcaagcagcttgaggatggtcgcacccttgcagattacaacatccagaagg 2083 Score = 468 bits (236), Expect = e-128 Identities = 375/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 1894 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggaggttgagtcgtct 1953 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||||||||| || ||||| |||||||||||||||||||| || || || |||||| Sbjct: 1954 gacacgatcgacaatgtgaaggccaagatccaggacaaggagggtattccaccagaccag 2013 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| |||||||||||||||||||| || ||||||||||| || |||||| Sbjct: 2014 cagcgcctcatcttcgctggcaagcagcttgaggatggtcgcacccttgcagattacaac 2073 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| ||||| || || ||||| | || ||||||||||||||| Sbjct: 2074 atccagaaggagtccaccctgcaccttgtcctgcgccttcgtggaggtatgcagatcttc 2133 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||||||||| |||||||||||||| ||||||| |||||| || |||||||||||| Sbjct: 2134 gtgaagaccctcactggcaagaccatcactctggaggttgagtcctctgacaccatcgac 2193 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||||||||| || || |||||||||| ||||||| Sbjct: 2194 aacgtgaaggccaagatccaggataaggagggcatccctccagaccagcagc-gcctcat 2252 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| |||||||| | ||| ||||||||||||| Sbjct: 2253 cttcgcc-ggcaagcagctcgaggatggccgcacccttgccgactataacatccagaagg 2311 Score = 394 bits (199), Expect = e-106 Identities = 358/408 (87%), Gaps = 3/408 (0%) Strand = Plus / Plus Query: 253 gtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctctgacacgatcgac 312 |||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 1451 gtgaagaccctcaccggcaagaccattaccctggaggtcgagtcctccgacacgatcgat 1510 Query: 313 aacgtcaaggcgaagatccaggacaaggagggcatccccccggaccagcagcgcctcatc 372 || || ||||| |||||||||||||||||||| ||||| || ||| ||||||| |||||| Sbjct: 1511 aatgtgaaggccaagatccaggacaaggagggaatcccaccagac-agcagcgtctcatc 1569 Query: 373 tttgctggcaagcagcttgaggacggccgcacccttgctgactacaacatccagaaggag 432 |||||||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 1570 tttgctgggaagcagctcgaggatggccgcacccttgcagactacaacatccaaaaggaa 1629 Query: 433 tccaccctccacctggtgctccgcctcaggggtggtatgcagatcttcgtgaagaccctc 492 |||||||| ||||| || || |||||| |||| |||||||||||||| ||||||||||| Sbjct: 1630 tccaccctgcaccttgtcctgcgcctccggggcggtatgcagatctttgtgaagaccctt 1689 Query: 493 accggcaagaccatcaccctggagggtgagtcttcggacaccatcgacaacgtcaaggcg 552 || |||||||| |||||| |||||| |||||| || ||||| |||||||| || ||||| Sbjct: 1690 actggcaagacgatcaccttggaggttgagtcctctgacacgatcgacaatgtgaaggcc 1749 Query: 553 aagatccaggacaaggagggcattcccccggaccagcagcggcctcatntttgncgggca 612 |||||||||||||||||||| ||||| || |||||||||||| ||||| || | | |||| Sbjct: 1750 aagatccaggacaaggagggtattccaccagaccagcagcgg-ctcatcttcg-ctggca 1807 Query: 613 agcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||||||||| || ||||| |||||||||| ||| ||||||||||||| Sbjct: 1808 agcagcttgaggacggccgcacccttgctgactataacatccagaagg 1855 Score = 313 bits (158), Expect = 5e-82 Identities = 358/422 (84%), Gaps = 3/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||| || || ||||||||||| ||||||||||||||| | |||||||||| || Sbjct: 1209 agatgcagatattcgttaagaccctcactggcaagaccatcaccttggaggttgagttct 1268 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 | || ||||| ||||| || ||||| ||||| |||||||||||||||||||| ||||||| Sbjct: 1269 ccgatacgattgacaatgtgaaggctaagattcaggacaaggagggcatccctccggacc 1328 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 |||| ||||| ||||| |||||||||||||||||||| || || || || || || || | Sbjct: 1329 agcaacgccttatcttcgctggcaagcagcttgaggatgggcgtactctcgcggattata 1388 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||||||| | ||||| || |||||||| | || || ||||| || | Sbjct: 1389 acatccagaaggagtccaccttgcaccttgtcctccgccttcgtggaggcatgcaaatat 1448 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 |||||||||||||||||||||||||||| |||||||||| ||||| || ||||| |||| Sbjct: 1449 tcgtgaagaccctcaccggcaagaccattaccctggaggtcgagtcctccgacacgatcg 1508 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 | || || ||||| |||||||||||||||||||| || || || || ||||||| | ||| Sbjct: 1509 ataatgtgaaggccaagatccaggacaaggagggaatcccaccaga-cagcagc-gtctc 1566 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| ||| |||||||| || |||||||| |||||||| | |||||||||||| || Sbjct: 1567 atctttgctggg-aagcagctcgaggatggccgcacccttgcagactacaacatccaaaa 1625 Query: 659 gg 660 || Sbjct: 1626 gg 1627 Score = 278 bits (140), Expect = 3e-71 Identities = 206/228 (90%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 2122 atgcagatcttcgtgaagaccctcactggcaagaccatcactctggaggttgagtcctct 2181 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||| ||||| ||||||||||| |||||||||||||| || |||||| Sbjct: 2182 gacaccatcgacaacgtgaaggccaagatccaggataaggagggcatccctccagaccag 2241 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| || ||||||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 2242 cagcgcctcatcttcgccggcaagcagctcgaggatggccgcacccttgccgactataac 2301 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 |||||||||||||||||||| ||||| || || |||||| | |||||| Sbjct: 2302 atccagaaggagtccaccctgcaccttgtcctgcgcctccgtggtggt 2349
>gb|L41658.1|SCFPOLY Saccharum hybrid (clone SCUBI561) polyubiquitin mRNA, complete cds Length = 1187 Score = 474 bits (239), Expect = e-130 Identities = 376/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || |||||||| |||||||||||||| ||||||||| Sbjct: 299 atgcagatctttgtgaagacccttactggcaagacgatcacccttgaggtggagtcctct 358 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 359 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcatccctccggaccag 418 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| |||||||| ||||| |||||||| |||||| Sbjct: 419 cagcggctcatcttcgccggcaagcagctggaggacgggcgcactcttgctgattacaac 478 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| |||||||||| ||||||| ||||||||||| || |||||||||||| Sbjct: 479 atccagaaggagagcaccctccacttggtgctgcgcctcaggggaggcatgcagatcttc 538 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||| |||||||| |||| ||||| || |||||||||||| Sbjct: 539 gtgaagacccttactggcaagacgatcacccttgaggtggagtcctctgacaccatcgac 598 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||| ||||| Sbjct: 599 aacgtcaaggccaagatccaggacaaggagggcatccctccggaccagcagcgg-ctcat 657 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || || || || || ||||||| |||||||||||||||| Sbjct: 658 cttcg-ctggcaagcagctggaggacgggcgcactcttgctgattacaacatccagaagg 716 Score = 460 bits (232), Expect = e-126 Identities = 375/422 (88%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 ||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| | Sbjct: 69 agatgcagatctttgtgaagaccctcaccggcaagactatcaccctcgaggtggagtctt 128 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 ||||||| || |||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 129 ctgacaccattgacaacgtcaaggctaagatccaggacaaggagggcattcccccggacc 188 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| |||||||| || ||||||||||| |||||||| ||||| |||||||| |||| Sbjct: 189 agcagcggctcatcttcgccggcaagcagctggaggacgggcgcactcttgctgattaca 248 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||| |||||||||| |||| || ||||||||||| || |||||||||| Sbjct: 249 acatccagaaggagagcaccctccacttggtkctgcgcctcaggggaggcatgcagatct 308 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | ||||||||||| || |||||||| |||||||| |||| ||||| || |||||||||| Sbjct: 309 ttgtgaagacccttactggcaagacgatcacccttgaggtggagtcctctgacaccatcg 368 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| ||| Sbjct: 369 acaacgtcaaggccaagatccaggacaaggagggcatccctccggaccagcagcgg-ctc 427 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || || | | ||||||||||| || || || || || ||||||| |||||||||||||| Sbjct: 428 atcttcgcc-ggcaagcagctggaggacgggcgcactcttgctgattacaacatccagaa 486 Query: 659 gg 660 || Sbjct: 487 gg 488 Score = 452 bits (228), Expect = e-124 Identities = 373/420 (88%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| || |||||||| |||||||||||||| ||||||||| Sbjct: 527 atgcagatcttcgtgaagacccttactggcaagacgatcacccttgaggtggagtcctct 586 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 587 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcatccctccggaccag 646 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| |||||||||||||| |||||||| ||||| |||||||| |||||| Sbjct: 647 cagcggctcatcttcgctggcaagcagctggaggacgggcgcactcttgctgattacaac 706 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| |||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 707 atccagaaggagagcaccctccacctggtgctgcgcctcaggggaggaatgcagatcttt 766 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | || ||||||||||| || ||||||| |||| || |||||||||||| Sbjct: 767 gtgaagaccttgactggcaagaccataacactggaggttgagagctccgacaccatcgac 826 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| |||||||||||||||||||| || ||||||||||| |||| | || || Sbjct: 827 aacgtgaaggccaagatccaggacaaggaggggatccccccggaccaacagc-gtctgat 885 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| |||||||| | ||||||||||||||||| Sbjct: 886 cttcgcc-ggcaagcagctggaggatggccgcacccttgcagactacaacatccagaagg 944 Score = 244 bits (123), Expect = 4e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||| | || ||||||||||| || || ||||||||| ||| Sbjct: 755 atgcagatctttgtgaagaccttgactggcaagaccataacactggaggttgagagctcc 814 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||| ||||| |||||||||||||||||||| |||||||||||||| Sbjct: 815 gacaccatcgacaacgtgaaggccaagatccaggacaaggaggggatccccccggaccaa 874 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| || ||||||||||| ||||| |||||||||||||| ||||||||| Sbjct: 875 cagcgtctgatcttcgccggcaagcagctggaggatggccgcacccttgcagactacaac 934 Query: 421 atccagaaggagtccaccctccacctggtgctccg 455 |||||||||||| ||||||||||||||||||||| Sbjct: 935 atccagaaggagagcaccctccacctggtgctccg 969
>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06, complete sequence Length = 141752 Score = 474 bits (239), Expect = e-130 Identities = 376/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || |||||||| |||||| | ||||||||||||||| Sbjct: 18834 atgcagatctttgtgaagacccttactggcaagacgatcaccttggaggttgagtcctct 18893 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||||||||| || ||||| |||||||||||||||||||| || || || |||||| Sbjct: 18894 gacacgatcgacaatgtgaaggccaagatccaggacaaggagggtattccaccagaccag 18953 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 18954 cagcggctcatcttcgctggcaagcagcttgaggacggccgcacccttgctgactataac 19013 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||| | ||| |||| |||||||| | || ||||||||||||||| Sbjct: 19014 atccagaaggagtccaccttgcacttggtcctccgccttcgtggaggtatgcagatcttc 19073 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||||||||||||||||||||||||||||| |||||| || ||||| |||||| Sbjct: 19074 gtgaagaccctcaccggcaagaccatcaccctggaggttgagtcgtctgacacgatcgac 19133 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||||||||||||||| ||||| || |||||||||| ||||||| Sbjct: 19134 aatgtgaaggccaagatccaggacaaggagggtattccaccagaccagcagc-gcctcat 19192 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | |||||||||||||| ||||| || |||||||| | |||||||||||||||| Sbjct: 19193 cttcg-ctggcaagcagcttgaggatggtcgcacccttgcagattacaacatccagaagg 19251 Score = 468 bits (236), Expect = e-128 Identities = 375/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 19062 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggaggttgagtcgtct 19121 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||||||||| || ||||| |||||||||||||||||||| || || || |||||| Sbjct: 19122 gacacgatcgacaatgtgaaggccaagatccaggacaaggagggtattccaccagaccag 19181 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| |||||||||||||||||||| || ||||||||||| || |||||| Sbjct: 19182 cagcgcctcatcttcgctggcaagcagcttgaggatggtcgcacccttgcagattacaac 19241 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| ||||| || || ||||| | || ||||||||||||||| Sbjct: 19242 atccagaaggagtccaccctgcaccttgtcctgcgccttcgtggaggtatgcagatcttc 19301 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||||||||| |||||||||||||| ||||||| |||||| || |||||||||||| Sbjct: 19302 gtgaagaccctcactggcaagaccatcactctggaggttgagtcctctgacaccatcgac 19361 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||||||||| || || |||||||||| ||||||| Sbjct: 19362 aacgtgaaggccaagatccaggataaggagggcatccctccagaccagcagc-gcctcat 19420 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| |||||||| | ||| ||||||||||||| Sbjct: 19421 cttcgcc-ggcaagcagctcgaggatggccgcacccttgccgactataacatccagaagg 19479 Score = 410 bits (207), Expect = e-111 Identities = 359/408 (87%), Gaps = 2/408 (0%) Strand = Plus / Plus Query: 253 gtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctctgacacgatcgac 312 |||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 18618 gtgaagaccctcaccggcaagaccattaccctggaggtcgagtcctccgacacgatcgat 18677 Query: 313 aacgtcaaggcgaagatccaggacaaggagggcatccccccggaccagcagcgcctcatc 372 || || ||||| |||||||||||||||||||| ||||| || ||||||||||| |||||| Sbjct: 18678 aatgtgaaggccaagatccaggacaaggagggaatcccaccagaccagcagcgtctcatc 18737 Query: 373 tttgctggcaagcagcttgaggacggccgcacccttgctgactacaacatccagaaggag 432 |||||||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 18738 tttgctgggaagcagctcgaggatggccgcacccttgcagactacaacatccaaaaggaa 18797 Query: 433 tccaccctccacctggtgctccgcctcaggggtggtatgcagatcttcgtgaagaccctc 492 |||||||| ||||| || || |||||| |||| |||||||||||||| ||||||||||| Sbjct: 18798 tccaccctgcaccttgtcctgcgcctccggggcggtatgcagatctttgtgaagaccctt 18857 Query: 493 accggcaagaccatcaccctggagggtgagtcttcggacaccatcgacaacgtcaaggcg 552 || |||||||| |||||| |||||| |||||| || ||||| |||||||| || ||||| Sbjct: 18858 actggcaagacgatcaccttggaggttgagtcctctgacacgatcgacaatgtgaaggcc 18917 Query: 553 aagatccaggacaaggagggcattcccccggaccagcagcggcctcatntttgncgggca 612 |||||||||||||||||||| ||||| || |||||||||||| ||||| || | | |||| Sbjct: 18918 aagatccaggacaaggagggtattccaccagaccagcagcgg-ctcatcttcg-ctggca 18975 Query: 613 agcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||||||||| || ||||| |||||||||| ||| ||||||||||||| Sbjct: 18976 agcagcttgaggacggccgcacccttgctgactataacatccagaagg 19023 Score = 329 bits (166), Expect = 9e-87 Identities = 359/422 (85%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||| || || ||||||||||| ||||||||||||||| | |||||||||| || Sbjct: 18376 agatgcagatattcgttaagaccctcactggcaagaccatcaccttggaggttgagttct 18435 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 | || ||||| ||||| || ||||| ||||| |||||||||||||||||||| ||||||| Sbjct: 18436 ccgatacgattgacaatgtgaaggctaagattcaggacaaggagggcatccctccggacc 18495 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 |||| ||||| ||||| |||||||||||||||||||| || || || || || || || | Sbjct: 18496 agcaacgccttatcttcgctggcaagcagcttgaggatgggcgtactctcgcggattata 18555 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||||||| | ||||| || |||||||| | || || ||||| || | Sbjct: 18556 acatccagaaggagtccaccttgcaccttgtcctccgccttcgtggaggcatgcaaatat 18615 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 |||||||||||||||||||||||||||| |||||||||| ||||| || ||||| |||| Sbjct: 18616 tcgtgaagaccctcaccggcaagaccattaccctggaggtcgagtcctccgacacgatcg 18675 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 | || || ||||| |||||||||||||||||||| || || || |||||||||| | ||| Sbjct: 18676 ataatgtgaaggccaagatccaggacaaggagggaatcccaccagaccagcagc-gtctc 18734 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| ||| |||||||| || |||||||| |||||||| | |||||||||||| || Sbjct: 18735 atctttgctggg-aagcagctcgaggatggccgcacccttgcagactacaacatccaaaa 18793 Query: 659 gg 660 || Sbjct: 18794 gg 18795 Score = 278 bits (140), Expect = 3e-71 Identities = 206/228 (90%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 19290 atgcagatcttcgtgaagaccctcactggcaagaccatcactctggaggttgagtcctct 19349 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||| ||||| ||||||||||| |||||||||||||| || |||||| Sbjct: 19350 gacaccatcgacaacgtgaaggccaagatccaggataaggagggcatccctccagaccag 19409 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| || ||||||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 19410 cagcgcctcatcttcgccggcaagcagctcgaggatggccgcacccttgccgactataac 19469 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 |||||||||||||||||||| ||||| || || |||||| | |||||| Sbjct: 19470 atccagaaggagtccaccctgcaccttgtcctgcgcctccgtggtggt 19517
>gb|BT017660.1| Zea mays clone EL01N0440E11.c mRNA sequence Length = 997 Score = 470 bits (237), Expect = e-129 Identities = 324/353 (91%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||| ||||| ||||||||||| |||||||| ||||| ||||||||| Sbjct: 304 atgcagatctttgtgaaaaccctgaccggcaagactatcaccctcgaggtggagtcctct 363 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || |||||||||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 364 gacaccattgacaacgtcaaggccaagatccaggacaaggagggcatccctccagaccag 423 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 424 cagcggctcatctttgctgggaagcagcttgaggacgggcgcacgcttgccgactacaac 483 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| |||||||||| ||||||| ||||||||||| || |||||||||||| Sbjct: 484 atccagaaggagagcaccctccacttggtgctgcgcctcaggggaggcatgcagatcttc 543 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||| || |||||||| ||||| |||||||| |||||||||||| Sbjct: 544 gtgaagaccctgaccggcaaaactatcaccctcgagggggagtcttcagacaccatcgac 603 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcg 593 ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 604 aacgtcaaggccaagatccaggacaaggagggcattcccccagaccagcagcg 656 Score = 426 bits (215), Expect = e-116 Identities = 373/423 (88%), Gaps = 3/423 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 ||||||||||||||||||| ||||| ||||||||||| |||||||| ||||| ||||| | Sbjct: 73 agatgcagatctttgtgaaaaccctgaccggcaagactatcaccctcgaggtggagtcgt 132 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaagg-agggcatccccccggac 357 ||||||| || |||||||| ||||| |||||||||||| || ||||||||||||| ||| Sbjct: 133 ctgacaccattgacaacgttaaggccaagatccaggacgggggagggcatccccccagac 192 Query: 358 cagcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactac 417 |||||||| |||||||| |||||||| |||||||||||||| ||||| |||||||||||| Sbjct: 193 cagcagcggctcatcttcgctggcaaacagcttgaggacgggcgcacgcttgctgactac 252 Query: 418 aacatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatc 477 ||||||||||||||| |||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 253 aacatccagaaggagagcaccctccaccttgtgctccgcctcaggggaggcatgcagatc 312 Query: 478 ttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatc 537 || ||||| ||||| ||||||||||| |||||||| |||| ||||| || |||||||| Sbjct: 313 tttgtgaaaaccctgaccggcaagactatcaccctcgaggtggagtcctctgacaccatt 372 Query: 538 gacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcct 597 |||||||||||||| ||||||||||||||||||||||| || || |||||||||||| || Sbjct: 373 gacaacgtcaaggccaagatccaggacaaggagggcatccctccagaccagcagcgg-ct 431 Query: 598 catntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccaga 657 ||| |||| ||| ||||||||||| || || || || ||||| | |||||||||||||| Sbjct: 432 catctttgctggg-aagcagcttgaggacgggcgcacgcttgccgactacaacatccaga 490 Query: 658 agg 660 ||| Sbjct: 491 agg 493 Score = 190 bits (96), Expect = 5e-45 Identities = 195/228 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||| || |||||||| |||| ||||| || Sbjct: 532 atgcagatcttcgtgaagaccctgaccggcaaaactatcaccctcgagggggagtcttca 591 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 592 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 651 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| || ||||| ||||| ||||| |||||| || | || ||||||||| Sbjct: 652 cagcgtctgatcttcgccggcaaacagctggaggatggccgccccttagcagactacaac 711 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 ||||| |||||| | |||||| ||| |||||||| ||| | |||||| Sbjct: 712 atccaaaaggagagccccctcccccttgtgctccgtctccgtggtggt 759
>gb|U29159.1|ZMU29159 Zea mays clone MubG1 ubiquitin gene, complete cds Length = 4190 Score = 470 bits (237), Expect = e-129 Identities = 377/422 (89%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 ||||||||||||||||||| ||||| || |||||||| |||||||| ||||| ||||| | Sbjct: 2341 agatgcagatctttgtgaaaaccctgactggcaagactatcaccctcgaggtggagtcgt 2400 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 ||||||| || |||||||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 2401 ctgacaccattgacaacgttaaggccaagatccaggacaaggagggcatccccccagacc 2460 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| ||||||||||||||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 2461 agcagcggctcatctttgctggcaaacagcttgaggacgggcgcacgcttgctgactaca 2520 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||| |||||||||||| |||||||| |||||||| || |||||||||| Sbjct: 2521 acatccagaaggagagcaccctccaccttgtgctccgtctcaggggaggcatgcagatct 2580 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | ||||| ||| | ||||||||||| |||||||| |||| |||||||| |||||||||| Sbjct: 2581 ttgtgaaaaccttgaccggcaagactatcaccctcgaggtggagtcttcagacaccatcg 2640 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 2641 acaacgtcaaggccaagatccaggacaaggagggcattcccccagaccagcagcgg-ctc 2699 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| | || ||||||||||| || || || || ||||| | ||||||||||||||| Sbjct: 2700 atctttg-ctggaaagcagcttgaggacgggcgcacgcttgccgactacaacatccagaa 2758 Query: 659 gg 660 || Sbjct: 2759 gg 2760 Score = 458 bits (231), Expect = e-125 Identities = 374/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||| ||| | ||||||||||| |||||||| ||||| ||||| || Sbjct: 2571 atgcagatctttgtgaaaaccttgaccggcaagactatcaccctcgaggtggagtcttca 2630 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 2631 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 2690 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 2691 cagcggctcatctttgctggaaagcagcttgaggacgggcgcacgcttgccgactacaac 2750 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| |||||||||| ||||||| ||||||||||| || |||||||||||| Sbjct: 2751 atccagaaggagagcaccctccacttggtgctgcgcctcaggggaggcatgcagatcttc 2810 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||| |||||||| |||| ||||| || |||||||| ||| Sbjct: 2811 gtgaagaccctgaccggcaagactatcaccctcgaggtggagtcgtctgacaccattgac 2870 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||| ||||| Sbjct: 2871 aacgttaaggccaagatccaggacaaggagggcatccccccagaccagcagcgg-ctcat 2929 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||| |||||||| || || || || ||||||| ||||||||||||||||| Sbjct: 2930 ctttg-ctggcaaacagcttgaggacgggcgcacgcttgctgactacaacatccagaagg 2988 Score = 450 bits (227), Expect = e-123 Identities = 373/420 (88%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||| |||||||| ||||| ||||| ||| Sbjct: 2799 atgcagatcttcgtgaagaccctgaccggcaagactatcaccctcgaggtggagtcgtct 2858 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || |||||||| ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 2859 gacaccattgacaacgttaaggccaagatccaggacaaggagggcatccccccagaccag 2918 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||||||||| |||||||||||||| ||||| ||||||||||||||| Sbjct: 2919 cagcggctcatctttgctggcaaacagcttgaggacgggcgcacgcttgctgactacaac 2978 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| |||||||||||| |||||||| |||||||| || ||||||||||| Sbjct: 2979 atccagaaggagagcaccctccaccttgtgctccgtctcaggggaggcatgcagatcttt 3038 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||| ||||| ||||||||||| |||||||| |||| |||||||| |||||||||||| Sbjct: 3039 gtgaaaaccctgaccggcaagactatcaccctcgaggtggagtcttcagacaccatcgac 3098 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| || ||||||||||||| | | || Sbjct: 3099 aatgtcaaggccaagatccaggacaaggagggcatcccaccggaccagcagc-gtttgat 3157 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| |||||||| | |||||||||||||||| Sbjct: 3158 cttcg-ctggcaagcagctggaggatggccgcacccttgcggattacaacatccagaagg 3216 Score = 444 bits (224), Expect = e-121 Identities = 372/420 (88%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||| ||||| ||||||||||| |||||||| ||||| ||||| || Sbjct: 3027 atgcagatctttgtgaaaaccctgaccggcaagactatcaccctcgaggtggagtcttca 3086 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 3087 gacaccatcgacaatgtcaaggccaagatccaggacaaggagggcatcccaccggaccag 3146 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| | ||||| |||||||||||||| ||||| |||||||||||||| || |||||| Sbjct: 3147 cagcgtttgatcttcgctggcaagcagctggaggatggccgcacccttgcggattacaac 3206 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 3207 atccagaaggagagcaccctccacctggtgctccgtctcaggggtggtatgcagatcttt 3266 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| ||||| |||||||| |||||||| |||| ||||||||||| ||||| ||| Sbjct: 3267 gtgaagacactcactggcaagacaatcacccttgaggtggagtcttcggataccattgac 3326 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| || || |||||||||| ||||||| Sbjct: 3327 aatgtcaaggccaagatccaggacaaggagggcatcccacccgaccagcagc-gcctcat 3385 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| ||||| || | |||||||||||||||| Sbjct: 3386 cttcgcc-ggcaagcagctggaggatggccgcaccctggcggattacaacatccagaagg 3444 Score = 379 bits (191), Expect = e-101 Identities = 364/420 (86%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||| ||||| |||||||| |||||||||||||| ||||| || Sbjct: 3255 atgcagatctttgtgaagacactcactggcaagacaatcacccttgaggtggagtcttcg 3314 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || || ||||| |||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 3315 gataccattgacaatgtcaaggccaagatccaggacaaggagggcatcccacccgaccag 3374 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| || ||||||||||| ||||| ||||||||||| || || |||||| Sbjct: 3375 cagcgcctcatcttcgccggcaagcagctggaggatggccgcaccctggcggattacaac 3434 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| ||| ||||||||||| |||||||||||||||| |||||||| || Sbjct: 3435 atccagaaggagagcactctccacctggtcgtccgcctcaggggtggcatgcagattttt 3494 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| | || ||||||||||||||| |||||| ||| || |||||||| ||| Sbjct: 3495 gtgaagacattgactggcaagaccatcaccttggaggtggagagctctgacaccattgac 3554 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||||||||||||||| |||||||||| | || || Sbjct: 3555 aatgtgaaggccaagatccaggacaaggagggcattcccccagaccagcagc-gtctgat 3613 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| ||||||||||||| || |||||||| || || || | ||||||||||||||||| Sbjct: 3614 ctttg-cgggcaagcagctggaggatggccgcactctcgcggactacaacatccagaagg 3672 Score = 349 bits (176), Expect = 9e-93 Identities = 360/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| ||||||||||| | || ||||||||||||||| | ||||| ||| |||| Sbjct: 3483 atgcagatttttgtgaagacattgactggcaagaccatcaccttggaggtggagagctct 3542 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| || ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 3543 gacaccattgacaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 3602 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || |||||||| ||||||||||| ||||| |||||||| || || ||||||||| Sbjct: 3603 cagcgtctgatctttgcgggcaagcagctggaggatggccgcactctcgcggactacaac 3662 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| |||||| ||||| || ||||||||||| ||||||||||||||||| Sbjct: 3663 atccagaaggagagcacccttcaccttgttctccgcctcagaggtggtatgcagatcttt 3722 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| || || || ||||| |||||||||| |||| ||||||||||||||| Sbjct: 3723 gtaaagaccctgactggaaaaaccataaccctggaggttgagagctcggacaccatcgac 3782 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||||||||||||||||||||||||||| |||||||||||||||| | || || Sbjct: 3783 aatgtgaaggcgaagatccaggacaaggagggcatccccccggaccagcagc-gtctgat 3841 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||| ||||| || |||||||| ||||| || | |||||||||||| |||| Sbjct: 3842 cttcgcc-ggcaaacagctggaggatggccgcaccctagcagactacaacatccaaaagg 3900 Score = 222 bits (112), Expect = 1e-54 Identities = 199/228 (87%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| |||||||| || || || ||||| ||||| ||||||||| ||| Sbjct: 3711 atgcagatctttgtaaagaccctgactggaaaaaccataaccctggaggttgagagctcg 3770 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 3771 gacaccatcgacaatgtgaaggcgaagatccaggacaaggagggcatccccccggaccag 3830 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| || ||||| ||||| ||||| ||||||||||| || ||||||||| Sbjct: 3831 cagcgtctgatcttcgccggcaaacagctggaggatggccgcaccctagcagactacaac 3890 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 ||||| |||||| |||||||||||| |||||||| ||| | |||||| Sbjct: 3891 atccaaaaggagagcaccctccaccttgtgctccgtctccgtggtggt 3938
>dbj|D12776.1|RICPOLYUBI Oryza sativa (japonica cultivar-group) mRNA for poly-ubiquitin, partial cds Length = 744 Score = 468 bits (236), Expect = e-128 Identities = 375/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 109 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggaggttgagtcgtct 168 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||||||||| || ||||| |||||||||||||||||||| || || || |||||| Sbjct: 169 gacacgatcgacaatgtgaaggccaagatccaggacaaggagggtattccaccagaccag 228 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| |||||||||||||||||||| || ||||||||||| || |||||| Sbjct: 229 cagcgcctcatcttcgctggcaagcagcttgaggatggtcgcacccttgcagattacaac 288 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| ||||| || || ||||| | || ||||||||||||||| Sbjct: 289 atccagaaggagtccaccctgcaccttgtcctgcgccttcgtggaggtatgcagatcttc 348 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||||||||| |||||||||||||| ||||||| |||||| || |||||||||||| Sbjct: 349 gtgaagaccctcactggcaagaccatcactctggaggttgagtcctctgacaccatcgac 408 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||||||||| || || |||||||||| ||||||| Sbjct: 409 aacgtgaaggccaagatccaggataaggagggcatccctccagaccagcagc-gcctcat 467 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| |||||||| | ||| ||||||||||||| Sbjct: 468 cttcgcc-ggcaagcagctcgaggatggccgcacccttgccgactataacatccagaagg 526 Score = 331 bits (167), Expect = 2e-87 Identities = 268/300 (89%), Gaps = 2/300 (0%) Strand = Plus / Plus Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1 cagcggctcatcttcgctggcaagcagcttgaggacggccgcacccttgctgactataac 60 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||| | ||| |||| |||||||| | || ||||||||||||||| Sbjct: 61 atccagaaggagtccaccttgcacttggtcctccgccttcgtggaggtatgcagatcttc 120 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||||||||||||||||||||||||||||| |||||| || ||||| |||||| Sbjct: 121 gtgaagaccctcaccggcaagaccatcaccctggaggttgagtcgtctgacacgatcgac 180 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||||||||||||||| ||||| || |||||||||| ||||||| Sbjct: 181 aatgtgaaggccaagatccaggacaaggagggtattccaccagaccagcagc-gcctcat 239 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | |||||||||||||| ||||| || |||||||| | |||||||||||||||| Sbjct: 240 cttcg-ctggcaagcagcttgaggatggtcgcacccttgcagattacaacatccagaagg 298 Score = 278 bits (140), Expect = 3e-71 Identities = 206/228 (90%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 337 atgcagatcttcgtgaagaccctcactggcaagaccatcactctggaggttgagtcctct 396 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||| ||||| ||||||||||| |||||||||||||| || |||||| Sbjct: 397 gacaccatcgacaacgtgaaggccaagatccaggataaggagggcatccctccagaccag 456 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| || ||||||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 457 cagcgcctcatcttcgccggcaagcagctcgaggatggccgcacccttgccgactataac 516 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 |||||||||||||||||||| ||||| || || |||||| | |||||| Sbjct: 517 atccagaaggagtccaccctgcaccttgtcctgcgcctccgtggtggt 564
>gb|AY954394.1| Oryza sativa (japonica cultivar-group) polyubiquitin (rubi3) gene, promoter region and complete cds Length = 3733 Score = 466 bits (235), Expect = e-128 Identities = 375/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || |||||||| |||||| | ||||||||||||||| Sbjct: 2973 atgcagatctttgtgaagacccttactggcaagacgatcaccttggaggttgagtcctct 3032 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||||||||| || ||||| |||||||||||||||||||| || || || |||||| Sbjct: 3033 gacacgatcgacaatgtgaaggccaagatccaggacaaggagggtattccaccagaccag 3092 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 3093 cagcggctcatcttcgctggcaagcagcttgaggacggccgcacccttgctgactataac 3152 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||| | ||| |||| |||||||| | || ||||||||||||||| Sbjct: 3153 atccagaaggagtccaccttgcacttggtcctccgccttcgtggaggtatgcagatcttc 3212 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||||||||||||||||||||||||||||| |||||| || ||||| |||||| Sbjct: 3213 gtgaagaccctcaccggcaagaccatcaccctggaggttgagtcgtctgacacgatcgac 3272 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||||||||||||||| ||||| || |||||||||| ||||| | Sbjct: 3273 aatgtgaaggccaagatccaggacaaggagggtattccaccagaccagcagc-gcctcgt 3331 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | |||||||||||||| ||||| || |||||||| | |||||||||||||||| Sbjct: 3332 cttcg-ctggcaagcagcttgaggatggtcgcacccttgcagattacaacatccagaagg 3390 Score = 460 bits (232), Expect = e-126 Identities = 374/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 3201 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggaggttgagtcgtct 3260 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||||||||| || ||||| |||||||||||||||||||| || || || |||||| Sbjct: 3261 gacacgatcgacaatgtgaaggccaagatccaggacaaggagggtattccaccagaccag 3320 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||||||| |||| |||||||||||||||||||| || ||||||||||| || |||||| Sbjct: 3321 cagcgcctcgtcttcgctggcaagcagcttgaggatggtcgcacccttgcagattacaac 3380 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| ||||| || || ||||| | || ||||||||||||||| Sbjct: 3381 atccagaaggagtccaccctgcaccttgtcctgcgccttcgtggaggtatgcagatcttc 3440 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||||||||| |||||||||||||| ||||||| |||||| || |||||||||||| Sbjct: 3441 gtgaagaccctcactggcaagaccatcactctggaggttgagtcctctgacaccatcgac 3500 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||||||||| || || |||||||||| ||||||| Sbjct: 3501 aacgtgaaggccaagatccaggataaggagggcatccctccagaccagcagc-gcctcat 3559 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| |||||||| | ||| ||||||||||||| Sbjct: 3560 cttcgcc-ggcaagcagctcgaggatggccgcacccttgccgactataacatccagaagg 3618 Score = 410 bits (207), Expect = e-111 Identities = 359/408 (87%), Gaps = 2/408 (0%) Strand = Plus / Plus Query: 253 gtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctctgacacgatcgac 312 |||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 2757 gtgaagaccctcaccggcaagaccattaccctggaggtcgagtcctccgacacgatcgat 2816 Query: 313 aacgtcaaggcgaagatccaggacaaggagggcatccccccggaccagcagcgcctcatc 372 || || ||||| |||||||||||||||||||| ||||| || ||||||||||| |||||| Sbjct: 2817 aatgtgaaggccaagatccaggacaaggagggaatcccaccagaccagcagcgtctcatc 2876 Query: 373 tttgctggcaagcagcttgaggacggccgcacccttgctgactacaacatccagaaggag 432 |||||||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 2877 tttgctgggaagcagctcgaggatggccgcacccttgcagactacaacatccaaaaggaa 2936 Query: 433 tccaccctccacctggtgctccgcctcaggggtggtatgcagatcttcgtgaagaccctc 492 |||||||| ||||| || || |||||| |||| |||||||||||||| ||||||||||| Sbjct: 2937 tccaccctgcaccttgtcctgcgcctccggggcggtatgcagatctttgtgaagaccctt 2996 Query: 493 accggcaagaccatcaccctggagggtgagtcttcggacaccatcgacaacgtcaaggcg 552 || |||||||| |||||| |||||| |||||| || ||||| |||||||| || ||||| Sbjct: 2997 actggcaagacgatcaccttggaggttgagtcctctgacacgatcgacaatgtgaaggcc 3056 Query: 553 aagatccaggacaaggagggcattcccccggaccagcagcggcctcatntttgncgggca 612 |||||||||||||||||||| ||||| || |||||||||||| ||||| || | | |||| Sbjct: 3057 aagatccaggacaaggagggtattccaccagaccagcagcgg-ctcatcttcg-ctggca 3114 Query: 613 agcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||||||||| || ||||| |||||||||| ||| ||||||||||||| Sbjct: 3115 agcagcttgaggacggccgcacccttgctgactataacatccagaagg 3162 Score = 329 bits (166), Expect = 9e-87 Identities = 359/422 (85%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||| || || ||||||||||| ||||||||||||||| | |||||||||| || Sbjct: 2515 agatgcagatattcgttaagaccctcactggcaagaccatcaccttggaggttgagttct 2574 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 | || ||||| ||||| || ||||| ||||| |||||||||||||||||||| ||||||| Sbjct: 2575 ccgatacgattgacaatgtgaaggctaagattcaggacaaggagggcatccctccggacc 2634 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 |||| ||||| ||||| |||||||||||||||||||| || || || || || || || | Sbjct: 2635 agcaacgccttatcttcgctggcaagcagcttgaggatgggcgtactctcgcggattata 2694 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||||||| | ||||| || |||||||| | || || ||||| || | Sbjct: 2695 acatccagaaggagtccaccttgcaccttgtcctccgccttcgtggaggcatgcaaatat 2754 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 |||||||||||||||||||||||||||| |||||||||| ||||| || ||||| |||| Sbjct: 2755 tcgtgaagaccctcaccggcaagaccattaccctggaggtcgagtcctccgacacgatcg 2814 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 | || || ||||| |||||||||||||||||||| || || || |||||||||| | ||| Sbjct: 2815 ataatgtgaaggccaagatccaggacaaggagggaatcccaccagaccagcagc-gtctc 2873 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| ||| |||||||| || |||||||| |||||||| | |||||||||||| || Sbjct: 2874 atctttgctggg-aagcagctcgaggatggccgcacccttgcagactacaacatccaaaa 2932 Query: 659 gg 660 || Sbjct: 2933 gg 2934 Score = 278 bits (140), Expect = 3e-71 Identities = 206/228 (90%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 3429 atgcagatcttcgtgaagaccctcactggcaagaccatcactctggaggttgagtcctct 3488 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||| ||||| ||||||||||| |||||||||||||| || |||||| Sbjct: 3489 gacaccatcgacaacgtgaaggccaagatccaggataaggagggcatccctccagaccag 3548 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| || ||||||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 3549 cagcgcctcatcttcgccggcaagcagctcgaggatggccgcacccttgccgactataac 3608 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 |||||||||||||||||||| ||||| || || |||||| | |||||| Sbjct: 3609 atccagaaggagtccaccctgcaccttgtcctgcgcctccgtggtggt 3656
>dbj|AK058319.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A10, full insert sequence Length = 1421 Score = 460 bits (232), Expect = e-126 Identities = 374/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||||||||||||||||||||||||||| | ||||||||| ||| Sbjct: 752 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctgggggttgagtcgtct 811 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||||||||| || ||||| |||||||||||||||||||| || || || |||||| Sbjct: 812 gacacgatcgacaatgtgaaggccaagatccaggacaaggagggtattccaccagaccag 871 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| |||||||||||||||||||| || ||||||||||| || |||||| Sbjct: 872 cagcgcctcatcttcgctggcaagcagcttgaggatggtcgcacccttgcagattacaac 931 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| ||||| || || ||||| | || ||||||||||||||| Sbjct: 932 atccagaaggagtccaccctgcaccttgtcctgcgccttcgtggaggtatgcagatcttc 991 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||||||||| |||||||||||||| ||||||| |||||| || |||||||||||| Sbjct: 992 gtgaagaccctcactggcaagaccatcactctggaggttgagtcctctgacaccatcgac 1051 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||||||||| || || |||||||||| ||||||| Sbjct: 1052 aacgtgaaggccaagatccaggataaggagggcatccctccagaccagcagc-gcctcat 1110 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| |||||||| | ||| ||||||||||||| Sbjct: 1111 cttcgcc-ggcaagcagctcgaggatggccgcacccttgccgactataacatccagaagg 1169 Score = 458 bits (231), Expect = e-125 Identities = 374/420 (89%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| |||||||| || |||||||| |||||| | ||||||||||||||| Sbjct: 524 atgcagatctttgtaaagacccttactggcaagacgatcaccttggaggttgagtcctct 583 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||||||||| || ||||| |||||||||||||||||||| || || || |||||| Sbjct: 584 gacacgatcgacaatgtgaaggccaagatccaggacaaggagggtattccaccagaccag 643 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 644 cagcggctcatcttcgctggcaagcagcttgaggacggccgcacccttgctgactataac 703 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||| | ||| |||| |||||||| | || ||||||||||||||| Sbjct: 704 atccagaaggagtccaccttgcacttggtcctccgccttcgtggaggtatgcagatcttc 763 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||||||||||||||||||||||||||||| || |||||| || ||||| |||||| Sbjct: 764 gtgaagaccctcaccggcaagaccatcaccctgggggttgagtcgtctgacacgatcgac 823 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||||||||||||||| ||||| || |||||||||| ||||||| Sbjct: 824 aatgtgaaggccaagatccaggacaaggagggtattccaccagaccagcagc-gcctcat 882 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | |||||||||||||| ||||| || |||||||| | |||||||||||||||| Sbjct: 883 cttcg-ctggcaagcagcttgaggatggtcgcacccttgcagattacaacatccagaagg 941 Score = 402 bits (203), Expect = e-109 Identities = 358/408 (87%), Gaps = 2/408 (0%) Strand = Plus / Plus Query: 253 gtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctctgacacgatcgac 312 |||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 308 gtgaagaccctcaccggcaagaccattaccctggaggtcgagtcctccgacacgatcgat 367 Query: 313 aacgtcaaggcgaagatccaggacaaggagggcatccccccggaccagcagcgcctcatc 372 || || ||||| |||||||||||||||||||| ||||| || ||||||||||| |||||| Sbjct: 368 aatgtgaaggccaagatccaggacaaggagggaatcccaccagaccagcagcgtctcatc 427 Query: 373 tttgctggcaagcagcttgaggacggccgcacccttgctgactacaacatccagaaggag 432 |||||||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 428 tttgctgggaagcagctcgaggatggccgcacccttgcagactacaacatccaaaaggaa 487 Query: 433 tccaccctccacctggtgctccgcctcaggggtggtatgcagatcttcgtgaagaccctc 492 |||||||| ||||| || || |||||| |||| |||||||||||||| || |||||||| Sbjct: 488 tccaccctgcaccttgtcctgcgcctccggggcggtatgcagatctttgtaaagaccctt 547 Query: 493 accggcaagaccatcaccctggagggtgagtcttcggacaccatcgacaacgtcaaggcg 552 || |||||||| |||||| |||||| |||||| || ||||| |||||||| || ||||| Sbjct: 548 actggcaagacgatcaccttggaggttgagtcctctgacacgatcgacaatgtgaaggcc 607 Query: 553 aagatccaggacaaggagggcattcccccggaccagcagcggcctcatntttgncgggca 612 |||||||||||||||||||| ||||| || |||||||||||| ||||| || | | |||| Sbjct: 608 aagatccaggacaaggagggtattccaccagaccagcagcgg-ctcatcttcg-ctggca 665 Query: 613 agcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||||||||| || ||||| |||||||||| ||| ||||||||||||| Sbjct: 666 agcagcttgaggacggccgcacccttgctgactataacatccagaagg 713 Score = 329 bits (166), Expect = 9e-87 Identities = 359/422 (85%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||| || || ||||||||||| ||||||||||||||| | |||||||||| || Sbjct: 66 agatgcagatattcgttaagaccctcactggcaagaccatcaccttggaggttgagttct 125 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 | || ||||| ||||| || ||||| ||||| |||||||||||||||||||| ||||||| Sbjct: 126 ccgatacgattgacaatgtgaaggctaagattcaggacaaggagggcatccctccggacc 185 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 |||| ||||| ||||| |||||||||||||||||||| || || || || || || || | Sbjct: 186 agcaacgccttatcttcgctggcaagcagcttgaggatgggcgtactctcgcggattata 245 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||||||| | ||||| || |||||||| | || || ||||| || | Sbjct: 246 acatccagaaggagtccaccttgcaccttgtcctccgccttcgtggaggcatgcaaatat 305 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 |||||||||||||||||||||||||||| |||||||||| ||||| || ||||| |||| Sbjct: 306 tcgtgaagaccctcaccggcaagaccattaccctggaggtcgagtcctccgacacgatcg 365 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 | || || ||||| |||||||||||||||||||| || || || |||||||||| | ||| Sbjct: 366 ataatgtgaaggccaagatccaggacaaggagggaatcccaccagaccagcagc-gtctc 424 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| ||| |||||||| || |||||||| |||||||| | |||||||||||| || Sbjct: 425 atctttgctggg-aagcagctcgaggatggccgcacccttgcagactacaacatccaaaa 483 Query: 659 gg 660 || Sbjct: 484 gg 485 Score = 278 bits (140), Expect = 3e-71 Identities = 206/228 (90%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 980 atgcagatcttcgtgaagaccctcactggcaagaccatcactctggaggttgagtcctct 1039 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||| ||||| ||||||||||| |||||||||||||| || |||||| Sbjct: 1040 gacaccatcgacaacgtgaaggccaagatccaggataaggagggcatccctccagaccag 1099 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| || ||||||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 1100 cagcgcctcatcttcgccggcaagcagctcgaggatggccgcacccttgccgactataac 1159 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 |||||||||||||||||||| ||||| || || |||||| | |||||| Sbjct: 1160 atccagaaggagtccaccctgcaccttgtcctgcgcctccgtggtggt 1207
>gb|BT016596.1| Zea mays clone Contig429 mRNA sequence Length = 980 Score = 456 bits (230), Expect = e-125 Identities = 375/422 (88%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 ||||||||||||||||||| ||||| ||||||||||| |||||||| ||||| ||||| | Sbjct: 65 agatgcagatctttgtgaaaaccctgaccggcaagactatcaccctcgaggtggagtcgt 124 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 ||||||| || |||||||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 125 ctgacaccattgacaacgttaaggccaagatccaggacaaggagggcatccccccagacc 184 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| |||||||| |||||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 185 agcagcggctcatcttcgctggcaaacagcttgaggacgggcgcacgcttgctgactaca 244 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||| |||||||||||| ||||||||||||||||| || |||||||||| Sbjct: 245 acatccagaaggagagcaccctccaccttgtgctccgcctcaggggaggcatgcagatct 304 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | ||||| ||||| ||||||||||| |||||||| |||| ||||| || |||||||| | Sbjct: 305 ttgtgaaaaccctgaccggcaagactatcaccctcgaggtggagtcctctgacaccattg 364 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 ||||||||||||| ||||||||||||||||||||||| || || |||||||||||| ||| Sbjct: 365 acaacgtcaaggccaagatccaggacaaggagggcatccctccagaccagcagcgg-ctc 423 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| ||| ||||||||||| || || || || ||||| | ||||||||||||||| Sbjct: 424 atctttgctggg-aagcagcttgaggacgggcgcacgcttgccgactacaacatccagaa 482 Query: 659 gg 660 || Sbjct: 483 gg 484 Score = 454 bits (229), Expect = e-124 Identities = 322/353 (91%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||| ||||| ||||||||||| |||||||| ||||| ||||||||| Sbjct: 295 atgcagatctttgtgaaaaccctgaccggcaagactatcaccctcgaggtggagtcctct 354 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || |||||||||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 355 gacaccattgacaacgtcaaggccaagatccaggacaaggagggcatccctccagaccag 414 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 415 cagcggctcatctttgctgggaagcagcttgaggacgggcgcacgcttgccgactacaac 474 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 475 atccagaaggagagcaccctccacctggtgctccgcctcaggggtggtatccagatcttt 534 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || || || ||||| |||||||||| |||| ||||||||||||||| Sbjct: 535 gtgaagaccctgactggaaaaaccataaccctggaggttgagagctcggacaccatcgac 594 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcg 593 || || ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 595 aatgtgaaggcgaagatccaggacaaggagggcatccccccggaccagcagcg 647 Score = 216 bits (109), Expect = 9e-53 Identities = 196/225 (87%) Strand = Plus / Plus Query: 244 cagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctctgac 303 |||||||||||||||||||| || || || ||||| ||||| ||||||||| ||| ||| Sbjct: 526 cagatctttgtgaagaccctgactggaaaaaccataaccctggaggttgagagctcggac 585 Query: 304 acgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccagcag 363 || |||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 586 accatcgacaatgtgaaggcgaagatccaggacaaggagggcatccccccggaccagcag 645 Query: 364 cgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaacatc 423 || || ||||| || ||||| ||||| ||||| ||||||||| | || |||||||||||| Sbjct: 646 cgtctgatcttcgccggcaaacagctggaggatggccgcaccttagcagactacaacatc 705 Query: 424 cagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 || |||||| |||||||||||| |||||||| ||| | |||||| Sbjct: 706 caaaaggagagcaccctccaccttgtgctccgtctccgtggtggt 750
>gb|BT016665.1| Zea mays clone Contig498 mRNA sequence Length = 1012 Score = 454 bits (229), Expect = e-124 Identities = 375/422 (88%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 ||||||||||||| || ||||| ||||| || ||||| |||||||| ||||| ||||||| Sbjct: 77 agatgcagatcttcgtcaagactctcactggaaagactatcaccctcgaggtggagtcct 136 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 ||||||| || |||||||||||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 137 ctgacaccattgacaacgtcaaggccaagatccaggacaaggaaggcattcccccggacc 196 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| |||||||| |||||||||||||| |||||||| ||||| ||||| ||||||| Sbjct: 197 agcagcggctcatcttcgctggcaagcagctcgaggacgggcgcacacttgccgactaca 256 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||| |||||||||||| || |||||||||||||| || |||||||||| Sbjct: 257 acatccagaaggagagcaccctccaccttgttctccgcctcaggggaggcatgcagatct 316 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 |||| ||||||||||| || ||||| |||||||| |||| |||||||| |||||||||| Sbjct: 317 tcgtcaagaccctcactggaaagactatcaccctcgaggtggagtcttctgacaccatcg 376 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 ||||||||||||| ||||||||||||||||||||||| || ||||||||||||| |||| Sbjct: 377 acaacgtcaaggccaagatccaggacaaggagggcatccctccggaccagcagc-gcctg 435 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| | ||||||||||| || |||||||| ||||| || | ||||||||||||||| Sbjct: 436 atctttg-ctggcaagcagctggaggatggccgtaccctcgccgactacaacatccagaa 494 Query: 659 gg 660 || Sbjct: 495 gg 496 Score = 428 bits (216), Expect = e-116 Identities = 370/420 (88%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| || ||||| |||||||| ||||| ||||| ||| Sbjct: 307 atgcagatcttcgtcaagaccctcactggaaagactatcaccctcgaggtggagtcttct 366 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 367 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcatccctccggaccag 426 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||| |||||||||||||||||||| ||||| ||||| ||||| || ||||||||| Sbjct: 427 cagcgcctgatctttgctggcaagcagctggaggatggccgtaccctcgccgactacaac 486 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| |||||||||||||||||||||| | | ||||||||||||||||| Sbjct: 487 atccagaaggagagcaccctccacctggtgctccgcttgcgaggtggtatgcagatcttt 546 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | || ||||||||||| |||||||||| |||| || |||||||||||| Sbjct: 547 gtgaagaccttgactggcaagaccataaccctggaggttgagagctccgacaccatcgac 606 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| |||||||||||||||||||| |||||||| ||||| |||||||||| | || || Sbjct: 607 aacgtgaaggcgaagatccaggacaaagagggcatccccccagaccagcagc-gtctgat 665 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| ||||| || | ||||||||||||||||| Sbjct: 666 cttcgcc-ggcaagcagctggaggatggccgcaccctagcagactacaacatccagaagg 724 Score = 254 bits (128), Expect = 4e-64 Identities = 203/228 (89%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||| | || ||||||||||| ||||| ||||||||| ||| Sbjct: 535 atgcagatctttgtgaagaccttgactggcaagaccataaccctggaggttgagagctcc 594 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 595 gacaccatcgacaacgtgaaggcgaagatccaggacaaagagggcatccccccagaccag 654 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| || ||||||||||| ||||| ||||||||||| || ||||||||| Sbjct: 655 cagcgtctgatcttcgccggcaagcagctggaggatggccgcaccctagcagactacaac 714 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 |||||||||||| ||| ||||||||||||||||||||| | |||||| Sbjct: 715 atccagaaggagagcactctccacctggtgctccgcctccgcggtggt 762
>gb|BT016652.1| Zea mays clone Contig485 mRNA sequence Length = 1253 Score = 452 bits (228), Expect = e-124 Identities = 373/420 (88%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| || |||||||| |||||||| ||||| ||||| || Sbjct: 84 atgcagatcttcgtgaagaccctgactggcaagactatcaccctcgaggtggagtcttca 143 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 144 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcatcccaccggaccag 203 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| | ||||| |||||||||||||| ||||| |||||||||||||| || |||||| Sbjct: 204 cagcgtttgatcttcgctggcaagcagctggaggatggccgcacccttgcggattacaac 263 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 264 atccagaaggagagcaccctccacctggtgctccgtctcaggggtggcatgcagatcttt 323 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| ||||| |||||||| |||||||| |||| ||||||||||| ||||| ||| Sbjct: 324 gtgaagacactcactggcaagacaatcacccttgaggtggagtcttcggataccattgac 383 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| || ||||||||||||| ||||||| Sbjct: 384 aatgtcaaggccaagatccaggacaaggagggcatcccaccggaccagcagc-gcctcat 442 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| ||||| || | ||||||||||||||||| Sbjct: 443 cttcgcc-ggcaagcagctggaggatggccgcaccctggcggactacaacatccagaagg 501 Score = 410 bits (207), Expect = e-111 Identities = 368/420 (87%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||| ||||| |||||||| |||||||||||||| ||||| || Sbjct: 312 atgcagatctttgtgaagacactcactggcaagacaatcacccttgaggtggagtcttcg 371 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || || ||||| |||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 372 gataccattgacaatgtcaaggccaagatccaggacaaggagggcatcccaccggaccag 431 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| || ||||||||||| ||||| ||||||||||| || ||||||||| Sbjct: 432 cagcgcctcatcttcgccggcaagcagctggaggatggccgcaccctggcggactacaac 491 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| ||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 492 atccagaaggagagcaccctccacctggtgctccgcctcaggggtggcatgcagattttt 551 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| | || ||||||||||||||| |||||| ||| || |||||||| ||| Sbjct: 552 gtgaagacattgactggcaagaccatcaccttggaggtggagagctctgacaccattgac 611 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||||||||||||||| ||||||||||| | | || Sbjct: 612 aatgtgaaggccaagatccaggacaaggagggcattcccccagaccagcagcgtc-tgat 670 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || ||||| || ||||| || | ||||||||||||||||| Sbjct: 671 ctttg-ctggcaagcagctggaggatggtcgcaccctcgcggactacaacatccagaagg 729 Score = 359 bits (181), Expect = 1e-95 Identities = 310/353 (87%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| ||||||||||| | || ||||||||||||||| | ||||| ||| |||| Sbjct: 540 atgcagatttttgtgaagacattgactggcaagaccatcaccttggaggtggagagctct 599 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| || ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 600 gacaccattgacaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 659 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || |||||||||||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 660 cagcgtctgatctttgctggcaagcagctggaggatggtcgcaccctcgcggactacaac 719 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| ||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 720 atccagaaggagagtacccttcaccttgttctccgcctcaggggtggtatgcagatcttt 779 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || || || ||||| |||||||||| |||| ||||||||||||||| Sbjct: 780 gtgaagaccctgactggaaaaaccataaccctggaggttgagagctcggacaccatcgac 839 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcg 593 || || ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 840 aatgtgaaggcgaagatccaggacaaggagggcatccccccggaccagcagcg 892 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || || || ||||| ||||| ||||||||| ||| Sbjct: 768 atgcagatctttgtgaagaccctgactggaaaaaccataaccctggaggttgagagctcg 827 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 828 gacaccatcgacaatgtgaaggcgaagatccaggacaaggagggcatccccccggaccag 887 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| || ||||| ||||| ||||| ||||||||| | || ||||||||| Sbjct: 888 cagcgtctgatcttcgccggcaaacagctggaggatggccgcaccttagcagactacaac 947 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 ||||| |||||| ||||||||||||||||||||||||| | |||||| Sbjct: 948 atccaaaaggagagcaccctccacctggtgctccgcctccgtggtggt 995 Score = 234 bits (118), Expect = 4e-58 Identities = 231/267 (86%), Gaps = 2/267 (0%) Strand = Plus / Plus Query: 394 gacggccgcacccttgctgactacaacatccagaaggagtccaccctccacctggtgctc 453 ||||| ||||| || || |||||||||||||||||| | |||||||||| ||||||| Sbjct: 9 gacgggcgcacgctggccgactacaacatccagaagctgagcaccctccacttggtgctg 68 Query: 454 cgcctcaggggtggtatgcagatcttcgtgaagaccctcaccggcaagaccatcaccctg 513 ||||||||||| || ||||||||||||||||||||||| || |||||||| |||||||| Sbjct: 69 cgcctcaggggaggcatgcagatcttcgtgaagaccctgactggcaagactatcaccctc 128 Query: 514 gagggtgagtcttcggacaccatcgacaacgtcaaggcgaagatccaggacaaggagggc 573 |||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 129 gaggtggagtcttcagacaccatcgacaacgtcaaggccaagatccaggacaaggagggc 188 Query: 574 attcccccggaccagcagcggcctcatntttgncgggcaagcagcttgangatggccgaa 633 || || ||||||||||||| | | || || | | ||||||||||| || |||||||| | Sbjct: 189 atcccaccggaccagcagc-gtttgatcttcg-ctggcaagcagctggaggatggccgca 246 Query: 634 cccttgctgnctacaacatccagaagg 660 ||||||| | |||||||||||||||| Sbjct: 247 cccttgcggattacaacatccagaagg 273
>gb|BT016403.1| Zea mays clone Contig236 mRNA sequence Length = 1019 Score = 450 bits (227), Expect = e-123 Identities = 373/420 (88%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||| | || ||||||||||| ||||| ||||||||| ||| Sbjct: 162 atgcagatctttgtgaagaccttgactggcaagaccataaccctggaggttgagagctcc 221 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 222 gacaccatcgacaacgtgaaggcgaagatccaggacaaagagggcatccccccagaccag 281 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| || ||||||||||| ||||| ||||||||||| || ||||||||| Sbjct: 282 cagcgtctgatcttcgccggcaagcagctggaggatggccgcaccctagcagactacaac 341 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| |||||||||| ||||||| || ||||||||||| |||||||||||| Sbjct: 342 atccagaaggagagcaccctccacttggtgctgcgtctcaggggtggcatgcagatcttc 401 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| || || |||||||| |||||||| |||| ||||| ||||||||||||||| Sbjct: 402 gtgaagacacttactggcaagacgatcacccttgaggtggagtcctcggacaccatcgac 461 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 462 aatgtcaaggccaagatccaggacaaggagggcattccaccggaccagcagcgg-ctcat 520 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| |||||||| | |||||||||||||||| Sbjct: 521 ctttg-ctggcaagcagctggaggatggccgtacccttgcagattacaacatccagaagg 579 Score = 436 bits (220), Expect = e-119 Identities = 371/420 (88%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||| || || |||||||| |||||||||||||| |||||||| Sbjct: 390 atgcagatcttcgtgaagacacttactggcaagacgatcacccttgaggtggagtcctcg 449 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| |||||||| ||||||||||||||||||||||| || ||||||||| Sbjct: 450 gacaccatcgacaatgtcaaggccaagatccaggacaaggagggcattccaccggaccag 509 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||||||||||||||| ||||| ||||| |||||||| || |||||| Sbjct: 510 cagcggctcatctttgctggcaagcagctggaggatggccgtacccttgcagattacaac 569 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| |||||||||| ||||||| || ||||||||||| |||||||||||| Sbjct: 570 atccagaaggagagcaccctccacttggtgctgcgtctcaggggtggcatgcagatcttc 629 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| || || |||||||| |||||||| |||| ||||| || |||||||| ||| Sbjct: 630 gtgaagactcttactggcaagacgatcacccttgaggtggagtcctcagacaccattgac 689 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||| || || Sbjct: 690 aacgtcaaggccaagatccaggacaaggagggcattccaccggaccagcagcgg-ctgat 748 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || ||||| || ||| | |||| ||||||||||||||||| Sbjct: 749 cttcgcc-ggcaagcagctggaggatggtcgcaccttggctgactacaacatccagaagg 807 Score = 335 bits (169), Expect = 1e-88 Identities = 302/345 (87%), Gaps = 2/345 (0%) Strand = Plus / Plus Query: 316 gtcaaggcgaagatccaggacaaggagggcatccccccggaccagcagcgcctcatcttt 375 ||||| || ||||||||||||||||||||||| || ||||||||||||||||| |||||| Sbjct: 9 gtcaaagccaagatccaggacaaggagggcattccaccggaccagcagcgcctgatcttt 68 Query: 376 gctggcaagcagcttgaggacggccgcacccttgctgactacaacatccagaaggagtcc 435 |||||||||||||| ||||| ||||| ||||| || ||||||||||||||||||||| | Sbjct: 69 gctggcaagcagctggaggatggccgtaccctcgccgactacaacatccagaaggagagc 128 Query: 436 accctccacctggtgctccgcctcaggggtggtatgcagatcttcgtgaagaccctcacc 495 ||||||||||||||||||||| | | ||||||||||||||||| ||||||||| | || Sbjct: 129 accctccacctggtgctccgcttgcgaggtggtatgcagatctttgtgaagaccttgact 188 Query: 496 ggcaagaccatcaccctggagggtgagtcttcggacaccatcgacaacgtcaaggcgaag 555 ||||||||||| |||||||||| |||| || ||||||||||||||||| ||||||||| Sbjct: 189 ggcaagaccataaccctggaggttgagagctccgacaccatcgacaacgtgaaggcgaag 248 Query: 556 atccaggacaaggagggcattcccccggaccagcagcggcctcatntttgncgggcaagc 615 ||||||||||| |||||||| ||||| |||||||||| | || || || | | ||||||| Sbjct: 249 atccaggacaaagagggcatccccccagaccagcagc-gtctgatcttcgcc-ggcaagc 306 Query: 616 agcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| || |||||||| ||||| || | ||||||||||||||||| Sbjct: 307 agctggaggatggccgcaccctagcagactacaacatccagaagg 351 Score = 246 bits (124), Expect = 1e-61 Identities = 202/228 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||| || || |||||||| |||||||||||||| |||||||| Sbjct: 618 atgcagatcttcgtgaagactcttactggcaagacgatcacccttgaggtggagtcctca 677 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || |||||||||||||| ||||||||||||||||||||||| || ||||||||| Sbjct: 678 gacaccattgacaacgtcaaggccaagatccaggacaaggagggcattccaccggaccag 737 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| || ||||||||||| ||||| || |||||| | |||||||||||| Sbjct: 738 cagcggctgatcttcgccggcaagcagctggaggatggtcgcaccttggctgactacaac 797 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 |||||||||||| |||||||||| |||||||||||||| | |||||| Sbjct: 798 atccagaaggagagcaccctccacttggtgctccgcctccgcggtggt 845
>gb|BT016274.1| Zea mays clone Contig107 mRNA sequence Length = 1486 Score = 450 bits (227), Expect = e-123 Identities = 373/420 (88%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||| ||||| ||||||||||| |||||||| ||||| ||||||||| Sbjct: 564 atgcagatctttgtgaaaaccctgaccggcaagactatcaccctcgaggtggagtcctct 623 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || |||||||||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 624 gacaccattgacaacgtcaaggccaagatccaggacaaggagggcatccctccagaccag 683 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||||||||| |||||||||||||||||||||||||| || ||||||||| Sbjct: 684 cagcggctcatctttgctgggaagcagcttgaggacggccgcaccctggccgactacaac 743 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| |||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 744 atccagaaggagagcaccctccacctggtgctccgcctcaggggaggcatgcagatcttc 803 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| | || ||||||||||||||| |||||| ||| || |||||||| ||| Sbjct: 804 gtgaagacattgactggcaagaccatcaccttggaggtggagagctctgacaccattgac 863 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||||||||||||||| ||||||||||| | | || Sbjct: 864 aatgtgaaggccaagatccaggacaaggagggcattcccccagaccagcagcgtc-tgat 922 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || ||||| || ||||| || | ||||||||||||||||| Sbjct: 923 ctttg-ctggcaagcagctggaggatggtcgcaccctcgcggactacaacatccagaagg 981 Score = 359 bits (181), Expect = 1e-95 Identities = 310/353 (87%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||| | || ||||||||||||||| | ||||| ||| |||| Sbjct: 792 atgcagatcttcgtgaagacattgactggcaagaccatcaccttggaggtggagagctct 851 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| || ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 852 gacaccattgacaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 911 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || |||||||||||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 912 cagcgtctgatctttgctggcaagcagctggaggatggtcgcaccctcgcggactacaac 971 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| ||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 972 atccagaaggagagtacccttcaccttgttctccgcctcaggggtggtatgcagatcttt 1031 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || || || ||||| |||||||||| |||| ||||||||||||||| Sbjct: 1032 gtgaagaccctgactggaaaaaccataaccctggaggttgagagctcggacaccatcgac 1091 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcg 593 || || ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1092 aatgtgaaggcgaagatccaggacaaggagggcatccccccggaccagcagcg 1144 Score = 262 bits (132), Expect = 2e-66 Identities = 229/260 (88%), Gaps = 2/260 (0%) Strand = Plus / Plus Query: 401 gcacccttgctgactacaacatccagaaggagtccaccctccacctggtgctccgcctca 460 |||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 496 gcacgcttgctgactacaacatccagaaggagagcaccctccaccttgtgctccgcctca 555 Query: 461 ggggtggtatgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtg 520 |||| || ||||||||||| ||||| ||||| ||||||||||| |||||||| |||| | Sbjct: 556 ggggaggcatgcagatctttgtgaaaaccctgaccggcaagactatcaccctcgaggtgg 615 Query: 521 agtcttcggacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccc 580 |||| || |||||||| |||||||||||||| ||||||||||||||||||||||| || | Sbjct: 616 agtcctctgacaccattgacaacgtcaaggccaagatccaggacaaggagggcatccctc 675 Query: 581 cggaccagcagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgc 640 | |||||||||||| ||||| |||| ||| ||||||||||| || ||||| ||||| || Sbjct: 676 cagaccagcagcgg-ctcatctttgctggg-aagcagcttgaggacggccgcaccctggc 733 Query: 641 tgnctacaacatccagaagg 660 | ||||||||||||||||| Sbjct: 734 cgactacaacatccagaagg 753 Score = 222 bits (112), Expect = 1e-54 Identities = 199/228 (87%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || || || ||||| ||||| ||||||||| ||| Sbjct: 1020 atgcagatctttgtgaagaccctgactggaaaaaccataaccctggaggttgagagctcg 1079 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1080 gacaccatcgacaatgtgaaggcgaagatccaggacaaggagggcatccccccggaccag 1139 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| || ||||| ||||| ||||| ||||||||| | || ||||||||| Sbjct: 1140 cagcgtctgatcttcgccggcaaacagctggaggatggccgcaccttagcagactacaac 1199 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 ||||| |||||| |||||||||||| |||||||| ||| | |||||| Sbjct: 1200 atccaaaaggagagcaccctccaccttgtgctccgtctccgtggtggt 1247
>gb|AF093504.1|AF093504 Saccharum hybrid cultivar H32-8560 tetra-ubiquitin (ubi4) gene, complete cds Length = 5551 Score = 444 bits (224), Expect = e-121 Identities = 371/420 (88%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| ||||| |||||| | || ||||||||||||||| | ||||| ||||| || Sbjct: 2259 atgcagatttttgtcaagaccttnactggcaagaccatcaccttggaggtggagtcttcg 2318 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| || |||| |||||||||||||||||| || |||||||| |||||| Sbjct: 2319 gacaccatngacaatgtgaaggngaagatccaggacaaggaaggaatccccccagaccag 2378 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || || ||||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 2379 cagcgtcttatttttgctggcaagcagcttgaggatggccgcaccctagcagactacaac 2438 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||| Sbjct: 2439 atccagaaggagtccacccttcacctggtgctccgcttncgcggtggtatgcagatcttc 2498 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||||||||||||||||||||||||||||| ||||| || |||||||||||| Sbjct: 2499 gtcaagaccctcaccggcaagaccatcaccctggaggtggagtcctctgacaccatcgac 2558 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||||||||||||||||||||||||||| |||||||||||||||| | ||||| Sbjct: 2559 aatgtgaaggcgaagatccaggacaaggagggcatccccccggaccagcagc-gtctcat 2617 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| ||||| || | ||||||||||||||||| Sbjct: 2618 cttcgcc-ggcaagcagctggaggatggccgcaccctggcagactacaacatccagaagg 2676 Score = 404 bits (204), Expect = e-109 Identities = 364/419 (86%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 ||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 1801 agatgcagatcttcgttaagaccctcactggcaagaccatcacccttgaggttgagtctt 1860 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 | |||| || ||| | ||| |||| ||||| ||||||||||| ||||| || ||||| | Sbjct: 1861 cagacamtattgacmatgtcmaggctaagatacaggacaaggaaggcattcctccggatc 1920 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||| | || |||||||||||||||||||| ||||| ||||| ||||| | |||||||| Sbjct: 1921 agcagaggctgatctttgctggcaagcagctcgaggatggccgtaccctagytgactaca 1980 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||||||| |||||||||||||| | |||||||| || ||||| |||| Sbjct: 1981 acatccagaaggagtccaccstccacctggtgctcaggctcaggggaggcatgcaaatct 2040 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 |||| ||||||||||| |||||||| ||||| || |||| |||||||| ||||| |||| Sbjct: 2041 tcgtcaagaccctcactggcaagactatcacgcttgaggtcgagtcttctgacacgatcg 2100 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 ||||||| ||||| |||||||||||||||||||| || ||||||||||||||||| | || Sbjct: 2101 acaacgtgaaggccaagatccaggacaaggagggaatccccccggaccagcagcgtc-tc 2159 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccaga 657 || || | | ||||||||||| || |||||||| ||||| |||| |||||||||||||| Sbjct: 2160 atcttcg-ctggcaagcagctcgaggatggccgcaccctcgctgactacaacatccaga 2217 Score = 400 bits (202), Expect = e-108 Identities = 365/420 (86%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| ||||| || ||||||||||| |||||||| ||||| |||||||| ||||| ||| Sbjct: 2031 atgcaaatcttcgtcaagaccctcactggcaagactatcacgcttgaggtcgagtcttct 2090 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 2091 gacacgatcgacaacgtgaaggccaagatccaggacaaggagggaatccccccggaccag 2150 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| |||||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 2151 cagcgtctcatcttcgctggcaagcagctcgaggatggccgcaccctcgctgactacaac 2210 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||| |||||| | ||||||| |||||| | | |||||||| |||||||| || Sbjct: 2211 atccaganggagtcgantntccaccttgtgctcaggttnaggggtggcatgcagattttt 2270 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||| | || ||||||||||||||| |||||| ||||||||||||||||| ||| Sbjct: 2271 gtcaagaccttnactggcaagaccatcaccttggaggtggagtcttcggacaccatngac 2330 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || |||| |||||||||||||||||| || || ||||| |||||||||| | || || Sbjct: 2331 aatgtgaaggngaagatccaggacaaggaaggaatccccccagaccagcagc-gtcttat 2389 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| |||||||| ||||| || | ||||||||||||||||| Sbjct: 2390 ttttg-ctggcaagcagcttgaggatggccgcaccctagcagactacaacatccagaagg 2448 Score = 307 bits (155), Expect = 3e-80 Identities = 200/215 (93%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 2487 atgcagatcttcgtcaagaccctcaccggcaagaccatcaccctggaggtggagtcctct 2546 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2547 gacaccatcgacaatgtgaaggcgaagatccaggacaaggagggcatccccccggaccag 2606 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| ||||||||||| || ||||||||| Sbjct: 2607 cagcgtctcatcttcgccggcaagcagctggaggatggccgcaccctggcagactacaac 2666 Query: 421 atccagaaggagtccaccctccacctggtgctccg 455 ||||||||||||||||| ||||||||||||||||| Sbjct: 2667 atccagaaggagtccactctccacctggtgctccg 2701 Score = 165 bits (83), Expect = 3e-37 Identities = 164/192 (85%), Gaps = 2/192 (1%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 |||||||||||||| ||||||||||| ||||||||||||||||| |||| ||||||||| Sbjct: 1803 atgcagatcttcgttaagaccctcactggcaagaccatcacccttgaggttgagtcttca 1862 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 |||| || ||| | ||| |||| ||||| ||||||||||| |||||||| ||||| ||| Sbjct: 1863 gacamtattgacmatgtcmaggctaagatacaggacaaggaaggcattcctccggatcag 1922 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||| ||| | || |||| | ||||||||||| || |||||||| ||||| | || ||||| Sbjct: 1923 cagaggc-tgatctttg-ctggcaagcagctcgaggatggccgtaccctagytgactaca 1980 Query: 649 acatccagaagg 660 |||||||||||| Sbjct: 1981 acatccagaagg 1992 Score = 48.1 bits (24), Expect = 0.047 Identities = 27/28 (96%) Strand = Plus / Plus Query: 721 accctcactggcaagaacatcacccttg 748 |||||||||||||||| ||||||||||| Sbjct: 1821 accctcactggcaagaccatcacccttg 1848 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Plus Query: 95 tgccgtagcctcacgggactctt 117 ||||||||||||||||||||||| Sbjct: 289 tgccgtagcctcacgggactctt 311
>gb|S94466.1| polyubiquitin [maize, Genomic, 3439 nt] Length = 3439 Score = 442 bits (223), Expect = e-121 Identities = 372/420 (88%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||| || || |||||||| |||||||||||||| ||||| ||| Sbjct: 2106 atgcagatcttcgtgaagactctgactggcaagactatcacccttgaggtcgagtcttct 2165 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || || ||||| |||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 2166 gataccattgacaatgtcaaggccaagatccaggacaaggagggcatccctccggaccag 2225 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||| ||||||||| Sbjct: 2226 cagcggctcatttttgccggcaagcagctcgaggacgggcgcacgcttgccgactacaac 2285 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 || ||||||||| |||||||||| ||||||| || ||||||||||| |||||||||||| Sbjct: 2286 attcagaaggagagcaccctccacttggtgctgcgtctcaggggtggcatgcagatcttc 2345 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| || || |||||||| |||||||| |||| ||||| ||||||||||||||| Sbjct: 2346 gtgaagacacttactggcaagacgatcacccttgaggtggagtcctcggacaccatcgac 2405 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 2406 aatgtcaaggccaagatccaggacaaggagggcattccaccggaccagcagcgg-ctcat 2464 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| |||||||| | |||||||||||||||| Sbjct: 2465 ctttg-ctggcaagcagctggaggatggccgtacccttgcagattacaacatccagaagg 2523 Score = 436 bits (220), Expect = e-119 Identities = 371/420 (88%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||| || || |||||||| |||||||||||||| |||||||| Sbjct: 2334 atgcagatcttcgtgaagacacttactggcaagacgatcacccttgaggtggagtcctcg 2393 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| |||||||| ||||||||||||||||||||||| || ||||||||| Sbjct: 2394 gacaccatcgacaatgtcaaggccaagatccaggacaaggagggcattccaccggaccag 2453 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||||||||||||||| ||||| ||||| |||||||| || |||||| Sbjct: 2454 cagcggctcatctttgctggcaagcagctggaggatggccgtacccttgcagattacaac 2513 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| |||||||||| ||||||| || ||||||||||| |||||||||||| Sbjct: 2514 atccagaaggagagcaccctccacttggtgctgcgtctcaggggtggcatgcagatcttc 2573 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| || || |||||||| |||||||| |||| ||||| || |||||||| ||| Sbjct: 2574 gtgaagactcttactggcaagacgatcacccttgaggtggagtcctcagacaccattgac 2633 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||| || || Sbjct: 2634 aacgtcaaggccaagatccaggacaaggagggcattccaccggaccagcagcgg-ctgat 2692 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || ||||| || ||| | |||| ||||||||||||||||| Sbjct: 2693 cttcgcc-ggcaagcagctggaggatggtcgcaccttggctgactacaacatccagaagg 2751 Score = 426 bits (215), Expect = e-116 Identities = 370/420 (88%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||| ||||| || ||||| |||||||| ||||| ||||||||| Sbjct: 1650 atgcagatcttcgtcaagactctcactggaaagactatcaccctcgaggtggagtcctct 1709 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || |||||||||||||| ||||||||||||||||| ||||| |||||||||||| Sbjct: 1710 gacaccattgacaacgtcaaggccaagatccaggacaaggaaggcattcccccggaccag 1769 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| |||||||||||||| |||||||| ||||| ||||| ||||||||| Sbjct: 1770 cagcggctcatcttcgctggcaagcagctcgaggacgggcgcacacttgccgactacaac 1829 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| |||||||||||| || |||||||||||||| || |||||||||||| Sbjct: 1830 atccagaaggagagcaccctccaccttgttctccgcctcaggggaggcatgcagatcttc 1889 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| || ||||| |||||||| |||| |||||||| |||||||||||| Sbjct: 1890 gtcaagaccctcactggaaagactatcaccctcgaggtggagtcttctgacaccatcgac 1949 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||| ||||| Sbjct: 1950 aacgtcaaggccaagatccaggacaaggagggcatccctccggaccagcagcgg-ctcat 2008 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || || || || || || || | ||||||||| ||||||| Sbjct: 2009 ttttg-ctggcaagcagctcgaggacgggcgcacgctggccgactacaacattcagaagg 2067 Score = 410 bits (207), Expect = e-111 Identities = 368/420 (87%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||| || || |||||||| |||||||||||||| |||||||| Sbjct: 2562 atgcagatcttcgtgaagactcttactggcaagacgatcacccttgaggtggagtcctca 2621 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || |||||||||||||| ||||||||||||||||||||||| || ||||||||| Sbjct: 2622 gacaccattgacaacgtcaaggccaagatccaggacaaggagggcattccaccggaccag 2681 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| || ||||||||||| ||||| || |||||| | |||||||||||| Sbjct: 2682 cagcggctgatcttcgccggcaagcagctggaggatggtcgcaccttggctgactacaac 2741 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 2742 atccagaaggagagcaccctccacttggtgctccgcctcaggggtggcatgcagatcttt 2801 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| | || ||||||||||||||| |||||| ||||| || ||||| ||||| Sbjct: 2802 gtgaagacattgactggcaagaccatcaccttggaggtggagtcgtctgacacaatcgat 2861 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || ||||| || |||||||||||||||||||||||||| ||||||||||||| |||| || Sbjct: 2862 aatgtcaaagccaagatccaggacaaggagggcattccaccggaccagcagc-gcctgat 2920 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| || | ||||||||||||||||| Sbjct: 2921 ctttg-ctggcaagcagctggaggatggccgtaccctcgccgactacaacatccagaagg 2979 Score = 396 bits (200), Expect = e-107 Identities = 366/420 (87%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||| | || ||||||||||||||| | ||||| ||||| ||| Sbjct: 2790 atgcagatctttgtgaagacattgactggcaagaccatcaccttggaggtggagtcgtct 2849 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || ||||| || ||||||||||||||||||||||| || ||||||||| Sbjct: 2850 gacacaatcgataatgtcaaagccaagatccaggacaaggagggcattccaccggaccag 2909 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||| |||||||||||||||||||| ||||| ||||| ||||| || ||||||||| Sbjct: 2910 cagcgcctgatctttgctggcaagcagctggaggatggccgtaccctcgccgactacaac 2969 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| |||||||||||||||||||||| | | ||||||||||||||||| Sbjct: 2970 atccagaaggagagcaccctccacctggtgctccgcttgcgaggtggtatgcagatcttt 3029 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | || ||||||||||| |||||||||| |||| || |||||||||||| Sbjct: 3030 gtgaagaccttgactggcaagaccataaccctggaggttgagagctccgacaccatcgac 3089 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| |||||||||||||||||||| |||||||| ||||| |||||||||| | || || Sbjct: 3090 aacgtgaaggcgaagatccaggacaaagagggcatccccccagaccagcagc-gtctgat 3148 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| ||||| || | ||||||||||||||||| Sbjct: 3149 cttcgcc-ggcaagcagctggaggatggccgcaccctagcagactacaacatccagaagg 3207 Score = 396 bits (200), Expect = e-107 Identities = 366/420 (87%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| || ||||| |||||||| ||||| ||||| ||| Sbjct: 1878 atgcagatcttcgtcaagaccctcactggaaagactatcaccctcgaggtggagtcttct 1937 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 1938 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcatccctccggaccag 1997 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||| ||||||||||||||||| |||||||| ||||| || || ||||||||| Sbjct: 1998 cagcggctcatttttgctggcaagcagctcgaggacgggcgcacgctggccgactacaac 2057 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 || ||||||||| |||||||||| ||||| | || |||||||| || |||||||||||| Sbjct: 2058 attcagaaggagagcaccctccacttggtgttgcgtctcaggggcggcatgcagatcttc 2117 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| || || |||||||| |||||||| |||| |||||||| || ||||| ||| Sbjct: 2118 gtgaagactctgactggcaagactatcacccttgaggtcgagtcttctgataccattgac 2177 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| || ||||||||||||||| ||||| Sbjct: 2178 aatgtcaaggccaagatccaggacaaggagggcatccctccggaccagcagcgg-ctcat 2236 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || || || || || ||||| | ||||||||| ||||||| Sbjct: 2237 ttttgcc-ggcaagcagctcgaggacgggcgcacgcttgccgactacaacattcagaagg 2295 Score = 254 bits (128), Expect = 4e-64 Identities = 203/228 (89%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||| | || ||||||||||| ||||| ||||||||| ||| Sbjct: 3018 atgcagatctttgtgaagaccttgactggcaagaccataaccctggaggttgagagctcc 3077 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 3078 gacaccatcgacaacgtgaaggcgaagatccaggacaaagagggcatccccccagaccag 3137 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| || ||||||||||| ||||| ||||||||||| || ||||||||| Sbjct: 3138 cagcgtctgatcttcgccggcaagcagctggaggatggccgcaccctagcagactacaac 3197 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 |||||||||||| ||| ||||||||||||||||||||| | |||||| Sbjct: 3198 atccagaaggagagcactctccacctggtgctccgcctccgcggtggt 3245
>gb|U29158.1|ZMU29158 Zea mays polyubiquitin (MubC5) mRNA, complete cds Length = 1381 Score = 434 bits (219), Expect = e-118 Identities = 371/420 (88%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||| || || |||||||| |||||||||||||| ||||| ||| Sbjct: 483 atgcagatcttcgtgaagactctgactggcaagactatcacccttgaggtcgagtcttct 542 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || || ||||| |||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 543 gataccattgacaatgtcaaggccaagatccaggacaaggagggcatccctccggaccag 602 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||| ||||||||| Sbjct: 603 cagcggctcatttttgccggcaagcagctcgaggacgggcgcacgcttgccgactacaac 662 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 || ||||||||| |||||||||| ||||||| || ||||||||||| |||||||||||| Sbjct: 663 attcagaaggagagcaccctccacttggtgctgcgtctcaggggtggcatgcagatcttc 722 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| || || |||||||| |||||||| |||| ||||| ||||||||||||||| Sbjct: 723 gtgaagacacttactggcaagacgatcacccttgaggtggagtcctcggacaccatcgac 782 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| |||||||||||||||||||||||||| ||||||||||||| |||| || Sbjct: 783 aatgtcaaggccaagatccaggacaaggagggcattccaccggaccagcagc-gcctgat 841 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| || | ||||||||||||||||| Sbjct: 842 ctttg-ctggcaagcagctggaggatggccgtaccctcgccgactacaacatccagaagg 900 Score = 422 bits (213), Expect = e-115 Identities = 371/422 (87%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 ||||||||||||| || ||||| ||||| || ||||| |||||||| ||||| ||||||| Sbjct: 25 agatgcagatcttcgtcaagactctcactggaaagactatcaccctcgaggtggagtcct 84 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 ||||||| || |||||||||||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 85 ctgacaccattgacaacgtcaaggccaagatccaggacaaggaaggcattcccccggacc 144 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| |||||||| |||||||||||||| |||||||| ||||| ||||| ||||||| Sbjct: 145 agcagcggctcatcttcgctggcaagcagctcgaggacgggcgcacacttgccgactaca 204 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||| |||||||||||| || |||||||||||||| || |||||||||| Sbjct: 205 acatccagaaggagagcaccctccaccttgttctccgcctcaggggaggcatgcagatct 264 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 |||| ||||||||||| || ||||| |||||||| |||| |||||||| |||||||||| Sbjct: 265 tcgtcaagaccctcactggaaagactatcaccctcgaggtggagtcttctgacaccatcg 324 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 ||||||||||||| |||||||||||||||||||| ||||| ||||||||||||| |||| Sbjct: 325 acaacgtcaaggccaagatccaggacaaggaggggattcctccggaccagcagc-gcctg 383 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| | ||||||||||| || || || || || || || | ||||||||| ||||| Sbjct: 384 atctttg-ctggcaagcagctcgaggacgggcgcacgctggccgactacaacattcagaa 442 Query: 659 gg 660 || Sbjct: 443 gg 444 Score = 404 bits (204), Expect = e-109 Identities = 367/420 (87%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||| || || |||||||| |||||||||||||| |||||||| Sbjct: 711 atgcagatcttcgtgaagacacttactggcaagacgatcacccttgaggtggagtcctcg 770 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| |||||||| ||||||||||||||||||||||| || ||||||||| Sbjct: 771 gacaccatcgacaatgtcaaggccaagatccaggacaaggagggcattccaccggaccag 830 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||| |||||||||||||||||||| ||||| ||||| ||||| || ||||||||| Sbjct: 831 cagcgcctgatctttgctggcaagcagctggaggatggccgtaccctcgccgactacaac 890 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| ||||||||||||||| ||||| | | ||||||||||||||||| Sbjct: 891 atccagaaggagagcaccctccacctggtcgtccgcttgcgaggtggtatgcagatcttt 950 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | || ||||||||||| |||||||||| |||| || |||||||||||| Sbjct: 951 gtgaagaccttgactggcaagaccataaccctggaggttgagagctccgacaccatcgac 1010 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| |||||||||||||||||||| |||||||| || || |||||||||| | || || Sbjct: 1011 aacgtgaaggcgaagatccaggacaaagagggcatccctccagaccagcagc-gtctgat 1069 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| || | ||||||||||||||||| Sbjct: 1070 ctttgcc-ggcaagcagctggaggatggccgcaccctagcagactacaacatccagaagg 1128 Score = 389 bits (196), Expect = e-104 Identities = 365/420 (86%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| || ||||| |||||||| ||||| ||||| ||| Sbjct: 255 atgcagatcttcgtcaagaccctcactggaaagactatcaccctcgaggtggagtcttct 314 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| |||||||||||||||||||| || || ||||||||| Sbjct: 315 gacaccatcgacaacgtcaaggccaagatccaggacaaggaggggattcctccggaccag 374 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||| |||||||||||||||||||| |||||||| ||||| || || ||||||||| Sbjct: 375 cagcgcctgatctttgctggcaagcagctcgaggacgggcgcacgctggccgactacaac 434 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 || ||||||||| |||||||||| ||||| | || |||||||| || |||||||||||| Sbjct: 435 attcagaaggagagcaccctccacttggtgttgcgtctcaggggcggcatgcagatcttc 494 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| || || |||||||| |||||||| |||| |||||||| || ||||| ||| Sbjct: 495 gtgaagactctgactggcaagactatcacccttgaggtcgagtcttctgataccattgac 554 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| || ||||||||||||||| ||||| Sbjct: 555 aatgtcaaggccaagatccaggacaaggagggcatccctccggaccagcagcgg-ctcat 613 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || || || || || ||||| | ||||||||| ||||||| Sbjct: 614 ttttgcc-ggcaagcagctcgaggacgggcgcacgcttgccgactacaacattcagaagg 672 Score = 254 bits (128), Expect = 4e-64 Identities = 203/228 (89%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||| | || ||||||||||| ||||| ||||||||| ||| Sbjct: 939 atgcagatctttgtgaagaccttgactggcaagaccataaccctggaggttgagagctcc 998 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||| |||||||||||||||||||| ||||||||||| || |||||| Sbjct: 999 gacaccatcgacaacgtgaaggcgaagatccaggacaaagagggcatccctccagaccag 1058 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || |||||||| ||||||||||| ||||| ||||||||||| || ||||||||| Sbjct: 1059 cagcgtctgatctttgccggcaagcagctggaggatggccgcaccctagcagactacaac 1118 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 |||||||||||| ||| ||||||||||||||||||||| | |||||| Sbjct: 1119 atccagaaggagagcactctccacctggtgctccgcctccgcggtggt 1166
>gb|BT016557.1| Zea mays clone Contig390 mRNA sequence Length = 981 Score = 420 bits (212), Expect = e-114 Identities = 378/432 (87%), Gaps = 2/432 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 ||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| | Sbjct: 38 agatgcagatctttgtgaagaccctcaccggcaagactatcaccctcgaggtggagtctt 97 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 ||||||| || ||||| |||||||| |||||||||||||||||||||||||| || |||| Sbjct: 98 ctgacaccattgacaatgtcaaggctaagatccaggacaaggagggcatccctcctgacc 157 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| || ||||| || |||||||||||||||||||||||||| ||||||||||||| Sbjct: 158 agcagcggcttatcttcgccggcaagcagcttgaggacggccgcacacttgctgactaca 217 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||| ||||| || ||||||| ||||| ||||| || |||||||||| Sbjct: 218 acatccagaaggagtcaacccttcatttggtgctgcgccttaggggaggcatgcagatct 277 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | || |||||| | || |||||||| |||||||| |||| |||||||| |||||||| | Sbjct: 278 ttgtcaagaccttgactggcaagacaatcacccttgaggtggagtcttcagacaccattg 337 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 | || |||||||| ||||||||||||||||||||||| || || |||||||||||| || Sbjct: 338 ataatgtcaaggctaagatccaggacaaggagggcatccctcctgaccagcagcgg-ctt 396 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || || | | |||||||||||||| || || || || ||||||| ||||||||||||||| Sbjct: 397 atcttcgcc-ggcaagcagcttgaggacggacgcacacttgctgactacaacatccagaa 455 Query: 659 ggggtcacccct 670 || |||| |||| Sbjct: 456 ggagtcaaccct 467 Score = 373 bits (188), Expect = e-100 Identities = 363/420 (86%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| |||||| | || |||||||| |||||||||||||| ||||| || Sbjct: 268 atgcagatctttgtcaagaccttgactggcaagacaatcacccttgaggtggagtcttca 327 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 328 gacaccattgataatgtcaaggctaagatccaggacaaggagggcatccctcctgaccag 387 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| || |||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 388 cagcggcttatcttcgccggcaagcagcttgaggacggacgcacacttgctgactacaac 447 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||||||| ||||||| ||||| ||||| || ||||||||||| Sbjct: 448 atccagaaggagtcaaccctccacttggtgctgcgccttaggggaggcatgcagatcttt 507 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||| | || |||||||| |||||||| |||| ||||| || |||||||| ||| Sbjct: 508 gtcaagaccttgactggcaagacaatcacccttgaggtggagtcctcagacaccattgac 567 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| || || |||||||| | | ||||| Sbjct: 568 aatgtcaaggcaaagatccaggacaaggagggcatcccacctgaccagcaac-gtctcat 626 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||| | || ||||| | |||||||||| ||||||||||||||||| Sbjct: 627 ctttgcc-ggcaagcagttggaggatgggaggacccttgctgactacaacatccagaagg 685 Score = 222 bits (112), Expect = 1e-54 Identities = 187/212 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| |||||| | || |||||||| |||||||||||||| |||||||| Sbjct: 496 atgcagatctttgtcaagaccttgactggcaagacaatcacccttgaggtggagtcctca 555 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| |||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 556 gacaccattgacaatgtcaaggcaaagatccaggacaaggagggcatcccacctgaccag 615 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 || || ||||||||||| ||||||||| | ||||| || | |||||||||||||||||| Sbjct: 616 caacgtctcatctttgccggcaagcagttggaggatgggaggacccttgctgactacaac 675 Query: 421 atccagaaggagtccaccctccacctggtgct 452 |||||||||||| |||||||||| ||||||| Sbjct: 676 atccagaaggagagcaccctccacttggtgct 707
>gb|U29162.1|ZMU29162 Zea mays clone MubG9 ubiquitin gene, complete cds Length = 2913 Score = 416 bits (210), Expect = e-113 Identities = 370/422 (87%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 ||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| | Sbjct: 1223 agatgcagatctttgtgaagaccctcaccggcaagactatcaccctcgaggtggagtctt 1282 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 ||||||| || ||||| |||||||| |||||||||||||||||||||||||| || |||| Sbjct: 1283 ctgacaccattgacaatgtcaaggctaagatccaggacaaggagggcatccctcctgacc 1342 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| || ||||| || |||||||||||||||||||| ||||| ||||||||||||| Sbjct: 1343 agcagcggcttatcttcgccggcaagcagcttgaggacggacgcacacttgctgactaca 1402 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||| ||||||||| ||||||| ||||| ||||| || |||||||||| Sbjct: 1403 acatccagaaggagtcaaccctccacttggtgctgcgccttaggggaggcatgcagatct 1462 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | || |||||| | || |||||||| |||||||| |||| ||||| || |||||||| | Sbjct: 1463 ttgtcaagaccttgactggcaagacaatcacccttgaggtggagtcctcagacaccattg 1522 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 |||| |||||||| ||||||||||||||||||||||| || || |||||||| | | ||| Sbjct: 1523 acaatgtcaaggcaaagatccaggacaaggagggcatcccacctgaccagcaac-gtctc 1581 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| | ||||||||| | || ||||| | |||||||||| ||||||||||||||| Sbjct: 1582 atctttgcc-ggcaagcagttggaggatgggaggacccttgctgactacaacatccagaa 1640 Query: 659 gg 660 || Sbjct: 1641 gg 1642 Score = 373 bits (188), Expect = e-100 Identities = 363/420 (86%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| |||||| | || |||||||| |||||||||||||| |||||||| Sbjct: 1453 atgcagatctttgtcaagaccttgactggcaagacaatcacccttgaggtggagtcctca 1512 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| |||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 1513 gacaccattgacaatgtcaaggcaaagatccaggacaaggagggcatcccacctgaccag 1572 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 || || ||||||||||| ||||||||| | ||||| || | |||||||||||||||||| Sbjct: 1573 caacgtctcatctttgccggcaagcagttggaggatgggaggacccttgctgactacaac 1632 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| |||||||||| ||||||| || || |||||||||||||||||||| Sbjct: 1633 atccagaaggagagcaccctccacttggtgctgcgtcttaggggtggtatgcagatcttt 1692 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||| ||||| || |||||||||||||| || |||| |||||||| || ||||| ||| Sbjct: 1693 gtgaaaacccttactggcaagaccatcactcttgaggtggagtcttcagataccattgac 1752 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| || ||||||||||||| | || || Sbjct: 1753 aatgtcaaggccaagatccaggacaaggagggcatcccgccggaccagcagc-gtcttat 1811 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || ||||| || |||||||| | |||||||| ||||||| Sbjct: 1812 ctttgcc-ggcaagcagctggaggatggacgcacccttgcggattacaacattcagaagg 1870 Score = 349 bits (176), Expect = 9e-93 Identities = 360/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||| ||||| || |||||||||||||| |||||||| ||||| || Sbjct: 1681 atgcagatctttgtgaaaacccttactggcaagaccatcactcttgaggtggagtcttca 1740 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || || ||||| |||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 1741 gataccattgacaatgtcaaggccaagatccaggacaaggagggcatcccgccggaccag 1800 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || |||||||| ||||||||||| ||||| || ||||||||||| || |||||| Sbjct: 1801 cagcgtcttatctttgccggcaagcagctggaggatggacgcacccttgcggattacaac 1860 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 || ||||||||| |||||||||||||||||| ||||||||||| || |||||||||||| Sbjct: 1861 attcagaaggagagcaccctccacctggtgctgcgcctcaggggaggaatgcagatcttc 1920 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| | || ||||||||||||||| |||||| |||| || |||||||| || Sbjct: 1921 gtgaagacattgactggcaagaccatcaccttggaggttgagagctccgacaccattgat 1980 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||||||||| |||||||| || || |||||||||||| || || Sbjct: 1981 aatgtgaaggccaagatccaggacaaagagggcatccctcctgaccagcagcgg-cttat 2039 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | |||||||||||||| || || || || ||||||| |||||||| ||||||| Sbjct: 2040 cttcgcc-ggcaagcagcttgaggacggacgcacacttgctgattacaacatacagaagg 2098 Score = 333 bits (168), Expect = 5e-88 Identities = 358/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||| | || ||||||||||||||| | ||||||||| ||| Sbjct: 1909 atgcagatcttcgtgaagacattgactggcaagaccatcaccttggaggttgagagctcc 1968 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| |||||||||||||| ||||||||||| || |||||| Sbjct: 1969 gacaccattgataatgtgaaggccaagatccaggacaaagagggcatccctcctgaccag 2028 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| || |||||||||||||||||||| ||||| |||||||| |||||| Sbjct: 2029 cagcggcttatcttcgccggcaagcagcttgaggacggacgcacacttgctgattacaac 2088 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 || ||||||||| |||||||||| ||||||| ||||| ||||| || ||||||||||| Sbjct: 2089 atacagaaggagagcaccctccacttggtgctgcgccttaggggaggcatgcagatcttt 2148 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | || ||||||||||| |||||||||| |||| || |||||||||||| Sbjct: 2149 gtgaagaccttgactggcaagaccataaccctggaggttgagagctctgacaccatcgac 2208 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| |||||||||||||||||||| |||||||| |||||||||| | || || Sbjct: 2209 aacgtgaaggctaagatccaggacaaggaggggattcccccagaccagcagc-gtctgat 2267 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || ||||| || |||||||| | |||||| |||||||||| Sbjct: 2268 cttcgcc-ggcaagcagctggaggatggtcgcacccttgcagactacaatatccagaagg 2326 Score = 236 bits (119), Expect = 1e-58 Identities = 191/215 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||| | || ||||||||||| ||||| ||||||||| |||| Sbjct: 2137 atgcagatctttgtgaagaccttgactggcaagaccataaccctggaggttgagagctct 2196 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||| ||||| |||||||||||||||||||| || ||||| |||||| Sbjct: 2197 gacaccatcgacaacgtgaaggctaagatccaggacaaggaggggattcccccagaccag 2256 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| || ||||||||||| ||||| || ||||||||||| |||||||| Sbjct: 2257 cagcgtctgatcttcgccggcaagcagctggaggatggtcgcacccttgcagactacaat 2316 Query: 421 atccagaaggagtccaccctccacctggtgctccg 455 |||||||||||| ||||||||||||||||||||| Sbjct: 2317 atccagaaggagagcaccctccacctggtgctccg 2351 Score = 186 bits (94), Expect = 8e-44 Identities = 176/202 (87%), Gaps = 2/202 (0%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||||||||| ||||||||||||||||||||||| |||||||| |||| |||||||| Sbjct: 1225 atgcagatctttgtgaagaccctcaccggcaagactatcaccctcgaggtggagtcttct 1284 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 |||||||| ||||| |||||||| ||||||||||||||||||||||| || || |||||| Sbjct: 1285 gacaccattgacaatgtcaaggctaagatccaggacaaggagggcatccctcctgaccag 1344 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||||||| | || || | ||| |||||||||||| || || || || ||||||| ||||| Sbjct: 1345 cagcggctt-atcttcgccgg-caagcagcttgaggacggacgcacacttgctgactaca 1402 Query: 649 acatccagaaggggtcacccct 670 |||||||||||| |||| |||| Sbjct: 1403 acatccagaaggagtcaaccct 1424
>gb|U74318.1|SCU74318 Schizophyllum commune polyubiquitin mRNA, complete cds Length = 1079 Score = 414 bits (209), Expect = e-112 Identities = 317/353 (89%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| |||||||| || |||||||||||||| || |||||||||||||| Sbjct: 41 atgcagatctttgtcaagacccttactggcaagaccatcactctcgaggttgagtcctcg 100 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| |||||||| ||||||||||||||||||||||| || || |||||| Sbjct: 101 gacaccatcgacaatgtcaaggccaagatccaggacaaggagggcattcctcccgaccag 160 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||| ||||| || ||||||||||| ||||| |||||||||||| | ||||||||| Sbjct: 161 cagcgcctgatcttcgccggcaagcagctcgaggatggccgcaccctttcggactacaac 220 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| || |||||||| |||||||| ||| | || || |||||||||||| Sbjct: 221 atccagaaggagtctactctccacctcgtgctccgtctccgtggcggcatgcagatcttc 280 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| |||||||| |||||||| |||| ||||| ||||||||||||||| Sbjct: 281 gtcaagaccctcacgggcaagactatcacccttgaggtcgagtcgtcggacaccatcgac 340 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcg 593 |||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 341 aacgtcaaggcgaagatccaggacaaggagggcattccgcccgaccagcagcg 393 Score = 309 bits (156), Expect = 8e-81 Identities = 355/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||| | ||||| |||||||| ||||| ||||| ||||| || Sbjct: 497 atgcagatcttcgtcaagaccttgaccgggaagaccattaccctcgaggtcgagtcgtcg 556 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||| ||||| |||||||||||||||||||||||||| || || ||| Sbjct: 557 gacacaatcgacaacgtgaaggccaagatccaggacaaggagggcatccctcccgatcag 616 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| |||||||||||||| ||||| |||||||| || | || |||||| Sbjct: 617 cagcgtcttatcttcgctggcaagcagctcgaggatggccgcactctctcggattacaac 676 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| || |||||||| || || || || | |||||||||||||||||| Sbjct: 677 atccagaaggagtcgactctccaccttgtcctacgtcttcgtggtggtatgcagatcttc 736 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| | || |||||||| ||||| || |||| || || || ||||| |||||| Sbjct: 737 gtcaagacgttgacgggcaagacgatcacgctcgaggtcgaatcctctgacacgatcgac 796 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 797 aacgtcaaggcgaagattcaggacaaggagggcattcccccggatcagcagc-gcctcat 855 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || || || || ||||| ||| ||||||||| ||||||| Sbjct: 856 cttcgcc-ggcaagcagctggaggacggtcgcaccctgtctgactacaacattcagaagg 914 Score = 295 bits (149), Expect = 1e-76 Identities = 302/353 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| |||||||| |||||||||||||| ||||| || Sbjct: 269 atgcagatcttcgtcaagaccctcacgggcaagactatcacccttgaggtcgagtcgtcg 328 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||||||||||||||||||||||||||| || || |||||| Sbjct: 329 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattccgcccgaccag 388 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || |||||||| || ||||| ||||||||||| ||||| | | |||||||| Sbjct: 389 cagcgtcttatctttgccgggaagcaacttgaggacgggcgcacgttgtccgactacaat 448 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 || ||||||||||| || | || || || ||||| || | |||||||||||||||||| Sbjct: 449 attcagaaggagtcgacgttgcatctcgtcctccgtctgcgtggtggtatgcagatcttc 508 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||| | ||||| |||||||| ||||| |||| ||||| |||||||| |||||| Sbjct: 509 gtcaagaccttgaccgggaagaccattaccctcgaggtcgagtcgtcggacacaatcgac 568 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcg 593 ||||| ||||| ||||||||||||||||||||||| || || || |||||||| Sbjct: 569 aacgtgaaggccaagatccaggacaaggagggcatccctcccgatcagcagcg 621 Score = 234 bits (118), Expect = 4e-58 Identities = 184/206 (89%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||| | || |||||||| ||||| || ||||| || |||||| Sbjct: 725 atgcagatcttcgtcaagacgttgacgggcaagacgatcacgctcgaggtcgaatcctct 784 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| Sbjct: 785 gacacgatcgacaacgtcaaggcgaagattcaggacaaggagggcattcccccggatcag 844 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| || ||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 845 cagcgcctcatcttcgccggcaagcagctggaggacggtcgcaccctgtctgactacaac 904 Query: 421 atccagaaggagtccaccctccacct 446 || ||||||||||| ||||||||||| Sbjct: 905 attcagaaggagtcgaccctccacct 930 Score = 182 bits (92), Expect = 1e-42 Identities = 168/192 (87%), Gaps = 2/192 (1%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||||||||| || |||||||| || |||||||||||||| || |||| |||||| ||| Sbjct: 41 atgcagatctttgtcaagacccttactggcaagaccatcactctcgaggttgagtcctcg 100 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 |||||||||||||| |||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 101 gacaccatcgacaatgtcaaggccaagatccaggacaaggagggcattcctcccgaccag 160 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||||| ||| || || | ||| ||||||||| || |||||||| |||||| | | ||||| Sbjct: 161 cagcg-cctgatcttcgccgg-caagcagctcgaggatggccgcaccctttcggactaca 218 Query: 649 acatccagaagg 660 |||||||||||| Sbjct: 219 acatccagaagg 230
>gb|AC152972.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0048I04, complete sequence Length = 35440 Score = 412 bits (208), Expect = e-112 Identities = 368/420 (87%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| |||||||| |||||| | || |||||||| |||||||||||||||||||| ||| Sbjct: 16673 atgcaaatctttgtcaagaccttgactggcaagactatcacccttgaggttgagtcttct 16732 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || || |||||||| ||||| ||||||||||||||||| || || |||||||||||| Sbjct: 16733 gatactattgacaacgttaaggcaaagatccaggacaaggaagggattcccccggaccag 16792 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || |||||||||||||||||||| ||||| || | |||||||||||||||||| Sbjct: 16793 cagcgtctgatctttgctggcaagcagctcgaggatggtaggacccttgctgactacaac 16852 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| ||||| || |||||||| ||||| || |||||||||||| Sbjct: 16853 atccagaaggagtccacccttcaccttgttctccgcctaaggggaggaatgcagatcttc 16912 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || ||||||||||| || || |||| |||||| || ||||| |||||| Sbjct: 16913 gtgaagacccttactggcaagaccattacgcttgaggttgagtcatcagacacgatcgac 16972 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||||||||||||||||||||||||||||||||| || ||||||| | || || Sbjct: 16973 aacgtgaaggcgaagatccaggacaaggagggcattcccccagatcagcagc-gtcttat 17031 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||| | ||||| |||| ||||||||||||||||| Sbjct: 17032 ttttgcc-ggcaagcagctggaggatggcaggaccctcgctgactacaacatccagaagg 17090 Score = 406 bits (205), Expect = e-110 Identities = 369/422 (87%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| Sbjct: 16443 agatgcagatctttgtgaagactctcactggcaagaccataacccttgaggttgagtcct 16502 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 | || || || ||||| || ||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 16503 cggataccattgacaatgtaaaggccaagatccaggacaaggagggaatcccaccggacc 16562 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| |||||||| ||||||||||||||||| || || ||||| ||||||||||||| Sbjct: 16563 agcagcgtctcatcttcgctggcaagcagcttgaagatgggcgcacgcttgctgactaca 16622 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 ||||||||||||| |||||||||||||| || ||||||||| |||| || ||||| |||| Sbjct: 16623 acatccagaaggaatccaccctccaccttgtcctccgcctccggggaggcatgcaaatct 16682 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | || |||||| | || |||||||| |||||||| |||| ||||||||| || || || | Sbjct: 16683 ttgtcaagaccttgactggcaagactatcacccttgaggttgagtcttctgatactattg 16742 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 ||||||| ||||| ||||||||||||||||| || ||||||||||||||||||| | || Sbjct: 16743 acaacgttaaggcaaagatccaggacaaggaagggattcccccggaccagcagc-gtctg 16801 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| | ||||||||||| || ||||| | |||||||||| ||||||||||||||| Sbjct: 16802 atctttg-ctggcaagcagctcgaggatggtaggacccttgctgactacaacatccagaa 16860 Query: 659 gg 660 || Sbjct: 16861 gg 16862 Score = 387 bits (195), Expect = e-104 Identities = 365/420 (86%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| || ||||||||||| || |||||||||||||| || Sbjct: 16901 atgcagatcttcgtgaagacccttactggcaagaccattacgcttgaggttgagtcatca 16960 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||| || ||| Sbjct: 16961 gacacgatcgacaacgtgaaggcgaagatccaggacaaggagggcattcccccagatcag 17020 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || || ||||| ||||||||||| ||||| ||| | ||||| |||||||||||| Sbjct: 17021 cagcgtcttatttttgccggcaagcagctggaggatggcaggaccctcgctgactacaac 17080 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| ||||| || || ||||| |||||||| |||||||| ||| Sbjct: 17081 atccagaaggagtccacccttcaccttgttctgcgcctaaggggtggaatgcagattttc 17140 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| ||||| |||||||| || |||||||||| |||| || |||||||| ||| Sbjct: 17141 gtcaagactctcactggcaagactattaccctggaggttgagagctcagacaccattgac 17200 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||||||||||||||| ||||||||||| ||||||||||||||| | ||||| Sbjct: 17201 aacgtgaaggcgaagatccaggataaggagggcatccccccggaccagcag-agactcat 17259 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | || |||||||| || |||||||| |||||||| | ||||||||| ||||||| Sbjct: 17260 cttcg-ctggtaagcagctggaggatggccgcacccttgccgactacaacattcagaagg 17318 Score = 373 bits (188), Expect = e-100 Identities = 363/420 (86%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| || || ||||| ||||| |||||||| || ||||| ||||||||| ||| Sbjct: 17129 atgcagattttcgtcaagactctcactggcaagactattaccctggaggttgagagctca 17188 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || |||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 17189 gacaccattgacaacgtgaaggcgaagatccaggataaggagggcatccccccggaccag 17248 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | |||||||| ||||| |||||||| ||||| |||||||||||||| ||||||||| Sbjct: 17249 cagagactcatcttcgctggtaagcagctggaggatggccgcacccttgccgactacaac 17308 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 || ||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 17309 attcagaaggagtctaccctacacttggtgctccgcctcaggggtggtatgcagatcttc 17368 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| || || ||||||||||| || ||||||| |||| || || ||||||||| Sbjct: 17369 gtcaagactcttactggcaagaccattactctggaggttgagagctccgataccatcgac 17428 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||| || |||||||| |||||||||| |||| || Sbjct: 17429 aatgtgaaggctaagatccaggacaaggaaggtattcccccagaccagcagc-gcctgat 17487 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| ||||| || | ||||||||| ||||||| Sbjct: 17488 cttcgcc-ggcaagcagctggaagatggccgtaccctcgccgactacaacattcagaagg 17546 Score = 206 bits (104), Expect = 9e-50 Identities = 197/228 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||| || || ||||||||||| || || ||||||||| ||| Sbjct: 17357 atgcagatcttcgtcaagactcttactggcaagaccattactctggaggttgagagctcc 17416 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || |||||||| || ||||| ||||||||||||||||| || || ||||| |||||| Sbjct: 17417 gataccatcgacaatgtgaaggctaagatccaggacaaggaaggtattcccccagaccag 17476 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||| ||||| || ||||||||||| || || ||||| ||||| || ||||||||| Sbjct: 17477 cagcgcctgatcttcgccggcaagcagctggaagatggccgtaccctcgccgactacaac 17536 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 17537 attcagaaggagtctaccctccacctggtgctccgcctcaggggtggt 17584
>gb|BT016436.1| Zea mays clone Contig269 mRNA sequence Length = 990 Score = 402 bits (203), Expect = e-109 Identities = 367/420 (87%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||| ||| | |||||| || || |||||||| |||||||||||||| |||||||| Sbjct: 38 atgcagaccttcgagaagactcttactggcaagacgatcacccttgaggtggagtcctca 97 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||||||||| || |||||||||||||||||||||||||| ||||||||| Sbjct: 98 gacaccattgacaacgtcaatgccaagatccaggacaaggagggcatcccaccggaccag 157 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| || |||||| | |||||||||||| Sbjct: 158 cagcggctcatcttcgccggcaagcagctggaggatggtcgcaccttggctgactacaac 217 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 218 atccagaaggagagcaccctccacttggtgctccgcctcaggggtggcatgcagatcttt 277 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| | || ||||||||||||||| |||||| ||||| || ||||| ||||| Sbjct: 278 gtgaagacattgactggcaagaccatcaccttggaggtggagtcgtctgacacaatcgat 337 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || ||||| || |||||||||||||||||||||||||| ||||||||||||| |||| || Sbjct: 338 aatgtcaaagccaagatccaggacaaggagggcattccaccggaccagcagc-gcctgat 396 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| || | ||||||||||||||||| Sbjct: 397 ctttg-ctggcaagcagctggaggatggccgtaccctcgccgactacaacatccagaagg 455 Score = 396 bits (200), Expect = e-107 Identities = 366/420 (87%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||| | || ||||||||||||||| | ||||| ||||| ||| Sbjct: 266 atgcagatctttgtgaagacattgactggcaagaccatcaccttggaggtggagtcgtct 325 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || ||||| || ||||||||||||||||||||||| || ||||||||| Sbjct: 326 gacacaatcgataatgtcaaagccaagatccaggacaaggagggcattccaccggaccag 385 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||| |||||||||||||||||||| ||||| ||||| ||||| || ||||||||| Sbjct: 386 cagcgcctgatctttgctggcaagcagctggaggatggccgtaccctcgccgactacaac 445 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| |||||||||||||||||||||| | | ||||||||||||||||| Sbjct: 446 atccagaaggagagcaccctccacctggtgctccgcttgcgaggtggtatgcagatcttt 505 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | || ||||||||||| |||||||||| |||| || |||||||||||| Sbjct: 506 gtgaagaccttgactggcaagaccataaccctggaggttgagagctccgacaccatcgac 565 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| |||||||||||||||||||| |||||||| ||||| |||||||||| | || || Sbjct: 566 aacgtgaaggcgaagatccaggacaaagagggcatccccccagaccagcagc-gtctgat 624 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| ||||| || | ||||||||||||||||| Sbjct: 625 cttcgcc-ggcaagcagctggaggatggccgcaccctagcagactacaacatccagaagg 683 Score = 254 bits (128), Expect = 4e-64 Identities = 203/228 (89%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||| | || ||||||||||| ||||| ||||||||| ||| Sbjct: 494 atgcagatctttgtgaagaccttgactggcaagaccataaccctggaggttgagagctcc 553 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 554 gacaccatcgacaacgtgaaggcgaagatccaggacaaagagggcatccccccagaccag 613 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| || ||||||||||| ||||| ||||||||||| || ||||||||| Sbjct: 614 cagcgtctgatcttcgccggcaagcagctggaggatggccgcaccctagcagactacaac 673 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 |||||||||||| ||| ||||||||||||||||||||| | |||||| Sbjct: 674 atccagaaggagagcactctccacctggtgctccgcctccgcggtggt 721 Score = 176 bits (89), Expect = 8e-41 Identities = 189/221 (85%), Gaps = 2/221 (0%) Strand = Plus / Plus Query: 440 tccacctggtgctccgcctcaggggtggtatgcagatcttcgtgaagaccctcaccggca 499 ||||| ||||||| || ||||||||||| ||||||| ||||| |||||| || || |||| Sbjct: 9 tccacttggtgctgcgtctcaggggtggcatgcagaccttcgagaagactcttactggca 68 Query: 500 agaccatcaccctggagggtgagtcttcggacaccatcgacaacgtcaaggcgaagatcc 559 |||| |||||||| |||| ||||| || |||||||| ||||||||||| || ||||||| Sbjct: 69 agacgatcacccttgaggtggagtcctcagacaccattgacaacgtcaatgccaagatcc 128 Query: 560 aggacaaggagggcattcccccggaccagcagcggcctcatntttgncgggcaagcagct 619 |||||||||||||||| || ||||||||||||||| ||||| || | | ||||||||||| Sbjct: 129 aggacaaggagggcatcccaccggaccagcagcgg-ctcatcttcgcc-ggcaagcagct 186 Query: 620 tgangatggccgaacccttgctgnctacaacatccagaagg 660 || ||||| || ||| | |||| ||||||||||||||||| Sbjct: 187 ggaggatggtcgcaccttggctgactacaacatccagaagg 227
>dbj|D63782.1|CRUPUQ Cricetulus sp. gene for polyubiquitin, complete cds Length = 8730 Score = 402 bits (203), Expect = e-109 Identities = 381/439 (86%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||||||| || Sbjct: 6741 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggttgagcccag 6800 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 6801 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 6860 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 6861 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 6920 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 6921 catccagaaggagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 6980 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 6981 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcga 7040 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 7041 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 7099 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 7100 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaag 7158 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 7159 gagtccaccctgcacctgg 7177 Score = 394 bits (199), Expect = e-106 Identities = 380/439 (86%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 6513 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 6572 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 6573 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 6632 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 6633 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 6692 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 6693 catccagaaggagtctaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 6752 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| |||| | ||||||||||| Sbjct: 6753 tgtgaagaccctgacaggcaagaccatcaccctggaggttgagcccagtgacaccatcga 6812 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 6813 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 6871 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 6872 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaag 6930 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 6931 gagtccaccctgcacctgg 6949 Score = 387 bits (195), Expect = e-104 Identities = 379/439 (86%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 6969 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 7028 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 7029 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 7088 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 7089 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 7148 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 7149 catccagaaggagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 7208 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 || |||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 7209 tgtaaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcga 7268 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 7269 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 7327 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 7328 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaag 7386 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 7387 gagtccaccctgcacctgg 7405 Score = 377 bits (190), Expect = e-101 Identities = 377/438 (86%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 6058 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 6117 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 6118 gacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 6177 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 6178 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaac 6237 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 6238 atccagaaggagtctaccctgcacctggtcctccgcctcaggggtgggatgcagatcttt 6297 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || || || |||||||||||||||| ||| | ||||||||||| Sbjct: 6298 gtgaagaccctgacagggaaaaccatcaccctggaggtcgagcccagtgacaccatcgag 6357 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | || Sbjct: 6358 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttgat 6416 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 6417 ctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaagg 6475 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 6476 agtctaccctgcacctgg 6493 Score = 371 bits (187), Expect = 3e-99 Identities = 377/439 (85%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || || || ||||||||||| ||||| ||| || Sbjct: 6285 gatgcagatctttgtgaagaccctgacagggaaaaccatcaccctggaggtcgagcccag 6344 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 6345 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 6404 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 6405 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 6464 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 6465 catccagaaggagtctaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 6524 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 6525 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcga 6584 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 6585 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 6643 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 6644 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaag 6702 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 6703 gagtctaccctgcacctgg 6721 Score = 363 bits (183), Expect = 6e-97 Identities = 376/439 (85%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||| ||||| || ||||||||||||||||| ||||| ||| || Sbjct: 7425 gatgcagatctttgtgaaaaccctgacaggcaagaccatcaccctggaggtcgagcccag 7484 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 7485 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 7544 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 7545 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 7604 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 7605 catccagaaggagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 7664 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 || |||||||| || ||||||||||| |||||||||| ||| | ||||||||||| Sbjct: 7665 tgtaaagaccctgacaggcaagaccataaccctggaggtcgagcccagtgacaccatcga 7724 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||| ||||||| ||||| ||||||||| || | | Sbjct: 7725 gaatgtcaaggcaaagatccaggacaagcagggcatcccccctgaccagcagagg-ttga 7783 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 7784 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaag 7842 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 7843 gagtctaccctgcacctgg 7861 Score = 363 bits (183), Expect = 6e-97 Identities = 376/439 (85%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 ||||||||||||||| |||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 7197 gatgcagatctttgtaaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 7256 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 7257 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 7316 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 7317 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 7376 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||| | ||||||||||| ||||||||||| Sbjct: 7377 catccagaaggagtccaccctgcacctggtcctcaggctcaggggtgggatgcagatctt 7436 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||| ||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 7437 tgtgaaaaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcga 7496 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 7497 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 7555 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 7556 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaag 7614 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 7615 gagtccaccctgcacctgg 7633 Score = 291 bits (147), Expect = 2e-75 Identities = 249/283 (87%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 ||||||||||||||| |||||||| || ||||||||||| ||||| ||||| ||| || Sbjct: 7653 gatgcagatctttgtaaagaccctgacaggcaagaccataaccctggaggtcgagcccag 7712 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||| ||||||||||||| ||||| Sbjct: 7713 tgacaccatcgagaatgtcaaggcaaagatccaggacaagcagggcatcccccctgacca 7772 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 7773 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 7832 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 7833 catccagaaggagtctaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 7892 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgag 522 ||||||||||| || |||||||||||||||||||||| |||| Sbjct: 7893 tgtgaagaccctgacaggcaagaccatcaccctggaggttgag 7935
>gb|AY103543.1| Zea mays PCO110026 mRNA sequence Length = 1623 Score = 400 bits (202), Expect = e-108 Identities = 368/422 (87%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 ||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| | Sbjct: 123 agatgcagatctttgtgaagaccctcaccggcaagactatcaccctcgaggtggagtctt 182 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 ||||||| || ||||| |||||||| |||||||||||||||||||||||||| || |||| Sbjct: 183 ctgacaccattgacaatgtcaaggctaagatccaggacaaggagggcatccctcctgacc 242 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| || ||||| || |||||||||||||||||||| ||||| ||||||||||||| Sbjct: 243 agcagcggcttatcttcgccggcaagcagcttgaggacggacgcacacttgctgactaca 302 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||| ||||||||| ||||||| ||||| ||||| || |||||||||| Sbjct: 303 acatccagaaggagtcaaccctccacttggtgctgcgccttaggggaggcatgcagatct 362 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | || |||||| | || |||||||| |||||||| |||| ||||| || |||||||| | Sbjct: 363 ttgtcaagaccttgactggcaagacaatcacccttgaggtggagtcctcagacaccattg 422 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 |||| |||||||| ||||||||||||||||||||||| || ||||||||||| | | ||| Sbjct: 423 acaatgtcaaggcaaagatccaggacaaggagggcatccctccggaccagcaac-gtctc 481 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| | ||||||||| | || ||||| || || || || | ||||||||| ||||| Sbjct: 482 atttttgcc-ggcaagcagttggaggatgggcgcacgctggccgactacaacattcagaa 540 Query: 659 gg 660 || Sbjct: 541 gg 542 Score = 381 bits (192), Expect = e-102 Identities = 364/420 (86%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||| ||||| || |||||||||||||| |||||||| ||||| || Sbjct: 581 atgcagatctttgtgaaaacccttactggcaagaccatcactcttgaggtggagtcttca 640 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || || ||||| |||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 641 gataccattgacaatgtcaaggccaagatccaggacaaggagggcatcccgccggaccag 700 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || |||||||| ||||||||||| ||||| || ||||||||||| || |||||| Sbjct: 701 cagcgtcttatctttgccggcaagcagctggaggatggacgcacccttgcggattacaac 760 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 || ||||||||| |||||||||||||||||| ||||||||||| || |||||||||||| Sbjct: 761 attcagaaggagagcaccctccacctggtgctgcgcctcaggggaggaatgcagatcttc 820 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| | || ||||||||||||||| |||||| |||| || |||||||| || Sbjct: 821 gtgaagacattgactggcaagaccatcaccttggaggttgagagctccgacaccattgat 880 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||||||||||||||| || |||||||||||||||||| ||||| Sbjct: 881 aatgtgaaggccaagatccaggacaaggagggtatccccccggaccagcagcgg-ctcat 939 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || ||||| || |||||||| | |||||||||||||||| Sbjct: 940 cttcgcc-ggcaagcagctggaggatggtcgcacccttgcagattacaacatccagaagg 998 Score = 365 bits (184), Expect = 2e-97 Identities = 362/420 (86%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||| | || ||||||||||||||| | ||||||||| ||| Sbjct: 809 atgcagatcttcgtgaagacattgactggcaagaccatcaccttggaggttgagagctcc 868 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 869 gacaccattgataatgtgaaggccaagatccaggacaaggagggtatccccccggaccag 928 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || ||||||||||| ||||| || ||||||||||| || |||||| Sbjct: 929 cagcggctcatcttcgccggcaagcagctggaggatggtcgcacccttgcagattacaac 988 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| ||||||||| |||||||||||||| ||||| |||||||||||||| Sbjct: 989 atccagaaggagagcaccctccatctggtgctccgcctgaggggcggtatgcagatcttt 1048 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | || ||||||||||| |||||||||| |||| || |||||||||||| Sbjct: 1049 gtgaagaccttgactggcaagaccataaccctggaggttgagagctctgacaccatcgac 1108 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| |||||||||||||||||||| |||||||| |||||||||| | || || Sbjct: 1109 aacgtgaaggctaagatccaggacaaggaggggattcccccagaccagcagc-gtctgat 1167 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || ||||| || |||||||| | |||||| |||||||||| Sbjct: 1168 cttcgcc-ggcaagcagctggaggatggtcgcacccttgcagactacaatatccagaagg 1226 Score = 357 bits (180), Expect = 4e-95 Identities = 361/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| |||||| | || |||||||| |||||||||||||| |||||||| Sbjct: 353 atgcagatctttgtcaagaccttgactggcaagacaatcacccttgaggtggagtcctca 412 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| |||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 413 gacaccattgacaatgtcaaggcaaagatccaggacaaggagggcatccctccggaccag 472 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 || || ||||| ||||| ||||||||| | ||||| || ||||| || || ||||||||| Sbjct: 473 caacgtctcatttttgccggcaagcagttggaggatgggcgcacgctggccgactacaac 532 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 || ||||||||| |||||||||| ||||||| || || |||||||||||||||||||| Sbjct: 533 attcagaaggagagcaccctccacttggtgctgcgtcttaggggtggtatgcagatcttt 592 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||| ||||| || |||||||||||||| || |||| |||||||| || ||||| ||| Sbjct: 593 gtgaaaacccttactggcaagaccatcactcttgaggtggagtcttcagataccattgac 652 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| || ||||||||||||| | || || Sbjct: 653 aatgtcaaggccaagatccaggacaaggagggcatcccgccggaccagcagc-gtcttat 711 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || ||||| || |||||||| | |||||||| ||||||| Sbjct: 712 ctttgcc-ggcaagcagctggaggatggacgcacccttgcggattacaacattcagaagg 770 Score = 236 bits (119), Expect = 1e-58 Identities = 191/215 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||| | || ||||||||||| ||||| ||||||||| |||| Sbjct: 1037 atgcagatctttgtgaagaccttgactggcaagaccataaccctggaggttgagagctct 1096 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||| ||||| |||||||||||||||||||| || ||||| |||||| Sbjct: 1097 gacaccatcgacaacgtgaaggctaagatccaggacaaggaggggattcccccagaccag 1156 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| || ||||||||||| ||||| || ||||||||||| |||||||| Sbjct: 1157 cagcgtctgatcttcgccggcaagcagctggaggatggtcgcacccttgcagactacaat 1216 Query: 421 atccagaaggagtccaccctccacctggtgctccg 455 |||||||||||| ||||||||||||||||||||| Sbjct: 1217 atccagaaggagagcaccctccacctggtgctccg 1251 Score = 186 bits (94), Expect = 8e-44 Identities = 176/202 (87%), Gaps = 2/202 (0%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||||||||| ||||||||||||||||||||||| |||||||| |||| |||||||| Sbjct: 125 atgcagatctttgtgaagaccctcaccggcaagactatcaccctcgaggtggagtcttct 184 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 |||||||| ||||| |||||||| ||||||||||||||||||||||| || || |||||| Sbjct: 185 gacaccattgacaatgtcaaggctaagatccaggacaaggagggcatccctcctgaccag 244 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||||||| | || || | ||| |||||||||||| || || || || ||||||| ||||| Sbjct: 245 cagcggctt-atcttcgccgg-caagcagcttgaggacggacgcacacttgctgactaca 302 Query: 649 acatccagaaggggtcacccct 670 |||||||||||| |||| |||| Sbjct: 303 acatccagaaggagtcaaccct 324
>dbj|AB003732.1| Cricetulus griseus gene for polyubiquitin, complete cds Length = 3273 Score = 394 bits (199), Expect = e-106 Identities = 380/439 (86%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 2333 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 2392 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 2393 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 2452 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 2453 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 2512 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 2513 catccagaaggagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 2572 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2573 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcga 2632 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 2633 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 2691 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 2692 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaag 2750 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 2751 gagtccaccctgcacctgg 2769 Score = 394 bits (199), Expect = e-106 Identities = 380/439 (86%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 2105 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 2164 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 2165 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 2224 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 2225 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 2284 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 2285 catccagaaggagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 2344 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2345 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcga 2404 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 2405 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 2463 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 2464 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaag 2522 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 2523 gagtccaccctgcacctgg 2541 Score = 394 bits (199), Expect = e-106 Identities = 380/439 (86%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 1877 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 1936 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1937 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 1996 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 1997 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 2056 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 2057 catccagaaggagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 2116 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2117 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcga 2176 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 2177 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 2235 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 2236 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaag 2294 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 2295 gagtccaccctgcacctgg 2313 Score = 394 bits (199), Expect = e-106 Identities = 380/439 (86%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 1193 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 1252 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1253 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 1312 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 1313 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 1372 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 1373 catccagaaggagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 1432 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1433 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcga 1492 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 1493 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 1551 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 1552 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaag 1610 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 1611 gagtccaccctgcacctgg 1629 Score = 394 bits (199), Expect = e-106 Identities = 380/439 (86%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 965 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 1024 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1025 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 1084 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 1085 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 1144 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 1145 catccagaaggagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 1204 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1205 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcga 1264 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 1265 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 1323 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 1324 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaag 1382 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 1383 gagtccaccctgcacctgg 1401 Score = 394 bits (199), Expect = e-106 Identities = 380/439 (86%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 737 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 796 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 797 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 856 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 857 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 916 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 917 catccagaaggagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 976 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 977 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcga 1036 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 1037 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 1095 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 1096 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaag 1154 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 1155 gagtccaccctgcacctgg 1173 Score = 394 bits (199), Expect = e-106 Identities = 380/439 (86%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 509 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 568 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 569 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 628 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 629 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 688 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 689 catccagaaggagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 748 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 749 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcga 808 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 809 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 867 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 868 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaag 926 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 927 gagtccaccctgcacctgg 945 Score = 392 bits (198), Expect = e-106 Identities = 379/438 (86%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||| ||||||||||| ||||| ||| || | Sbjct: 54 atgcagatctttgtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccagt 113 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 114 gacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 173 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 174 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaac 233 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 234 atccagaaggagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatcttt 293 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 294 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcgag 353 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | || Sbjct: 354 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttgat 412 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 413 ctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaagg 471 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 472 agtctaccctgcacctgg 489 Score = 387 bits (195), Expect = e-104 Identities = 379/439 (86%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 2561 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 2620 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 2621 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 2680 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 2681 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 2740 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 2741 catccagaaggagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 2800 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || ||||| |||||||||||||||| ||| | ||||||||||| Sbjct: 2801 tgtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccagtgacaccatcga 2860 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 2861 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 2919 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 2920 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaag 2978 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 2979 gagtctaccctgcacctgg 2997 Score = 387 bits (195), Expect = e-104 Identities = 379/439 (86%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 281 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 340 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 341 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 400 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 401 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 460 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 461 catccagaaggagtctaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 520 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 521 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcga 580 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 581 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 639 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 640 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaag 698 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 699 gagtccaccctgcacctgg 717 Score = 379 bits (191), Expect = e-101 Identities = 378/439 (86%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 1421 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 1480 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1481 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 1540 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 1541 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 1600 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 1601 catccagaaggagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 1660 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || ||||| |||||||||||||||| ||| | ||||||||||| Sbjct: 1661 tgtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccagtgacaccatcga 1720 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 1721 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 1779 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | ||||||| |||||||| Sbjct: 1780 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacgtccagaag 1838 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 1839 gagtctaccctgcacctgg 1857 Score = 371 bits (187), Expect = 3e-99 Identities = 377/439 (85%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||| ||||||||||| ||||| ||| || Sbjct: 1649 gatgcagatctttgtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccag 1708 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1709 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 1768 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 1769 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 1828 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 | ||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 1829 cgtccagaaggagtctaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 1888 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1889 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcga 1948 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 1949 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 2007 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 2008 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaag 2066 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 2067 gagtccaccctgcacctgg 2085 Score = 307 bits (155), Expect = 3e-80 Identities = 251/283 (88%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||| ||||||||||| ||||| ||| || Sbjct: 2789 gatgcagatctttgtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccag 2848 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 2849 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 2908 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 2909 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 2968 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 2969 catccagaaggagtctaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 3028 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgag 522 ||||||||||| || |||||||||||||||||||||| |||| Sbjct: 3029 tgtgaagaccctgacaggcaagaccatcaccctggaggttgag 3071
>dbj|AB003731.1| Cricetulus griseus gene for polyubiquitin, complete cds Length = 2817 Score = 394 bits (199), Expect = e-106 Identities = 380/439 (86%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 2105 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 2164 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 2165 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 2224 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || |||||||| || |||||||||| Sbjct: 2225 gcagaggttgatctttgccggcaagcagctggaagatggccgcactctgtctgactacaa 2284 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 2285 catccagaaggagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 2344 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2345 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcga 2404 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 2405 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 2463 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 2464 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaag 2522 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 2523 gagtctaccctgcacctgg 2541 Score = 394 bits (199), Expect = e-106 Identities = 380/439 (86%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 1421 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 1480 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1481 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 1540 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 1541 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 1600 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 1601 catccagaaggagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 1660 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1661 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcga 1720 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 1721 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 1779 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 1780 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaag 1838 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 1839 gagtccaccctgcacctgg 1857 Score = 394 bits (199), Expect = e-106 Identities = 380/439 (86%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 1193 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 1252 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1253 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 1312 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 1313 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 1372 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 1373 catccagaaggagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 1432 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1433 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcga 1492 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 1493 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 1551 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 1552 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaag 1610 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 1611 gagtccaccctgcacctgg 1629 Score = 394 bits (199), Expect = e-106 Identities = 380/439 (86%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 965 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 1024 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1025 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 1084 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 1085 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 1144 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 1145 catccagaaggagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 1204 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1205 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcga 1264 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 1265 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 1323 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 1324 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaag 1382 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 1383 gagtccaccctgcacctgg 1401 Score = 394 bits (199), Expect = e-106 Identities = 380/439 (86%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 737 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 796 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 797 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 856 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 857 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 916 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 917 catccagaaggagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 976 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 977 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcga 1036 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 1037 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 1095 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 1096 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaag 1154 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 1155 gagtccaccctgcacctgg 1173 Score = 394 bits (199), Expect = e-106 Identities = 380/439 (86%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 509 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 568 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 569 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 628 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 629 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 688 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 689 catccagaaggagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 748 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 749 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcga 808 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 809 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 867 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 868 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaag 926 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 927 gagtccaccctgcacctgg 945 Score = 387 bits (195), Expect = e-104 Identities = 379/439 (86%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||| ||||||||||| ||||| ||| || Sbjct: 1877 gatgcagatctttgtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccag 1936 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1937 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 1996 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 1997 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 2056 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 2057 catccagaaggagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 2116 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2117 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcga 2176 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 2177 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 2235 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| || || ||| |||||||||||||||| Sbjct: 2236 tctttgcc-ggcaagcagctggaagatggccgcactctgtctgactacaacatccagaag 2294 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 2295 gagtccaccctgcacctgg 2313 Score = 387 bits (195), Expect = e-104 Identities = 379/439 (86%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 1649 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 1708 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1709 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 1768 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 1769 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 1828 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 1829 catccagaaggagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 1888 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || ||||| |||||||||||||||| ||| | ||||||||||| Sbjct: 1889 tgtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccagtgacaccatcga 1948 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 1949 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 2007 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 2008 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaag 2066 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 2067 gagtccaccctgcacctgg 2085 Score = 387 bits (195), Expect = e-104 Identities = 379/439 (86%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||| ||||||||||| ||||| ||| || Sbjct: 281 gatgcagatctttgtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccag 340 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 341 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 400 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 401 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 460 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 461 catccagaaggagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 520 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 521 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcga 580 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | | Sbjct: 581 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttga 639 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 640 tctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaag 698 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 699 gagtccaccctgcacctgg 717 Score = 385 bits (194), Expect = e-103 Identities = 378/438 (86%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||| ||||||||||| ||||| ||| || | Sbjct: 54 atgcagatctttgtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccagt 113 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 114 gacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 173 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 174 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaac 233 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 234 atccagaaggagtccaccctgcacctggtcctccgcctcaggggtgggatgcagatcttt 293 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || ||||| |||||||||||||||| ||| | ||||||||||| Sbjct: 294 gtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccagtgacaccatcgag 353 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || | || Sbjct: 354 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ttgat 412 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 413 ctttgcc-ggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaagg 471 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 472 agtccaccctgcacctgg 489 Score = 315 bits (159), Expect = 1e-82 Identities = 252/283 (89%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 2333 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 2392 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 2393 tgacaccatcgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 2452 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 2453 gcagaggttgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaa 2512 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 2513 catccagaaggagtctaccctgcacctggtcctccgcctcaggggtgggatgcagatctt 2572 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgag 522 ||||||||||| || |||||||||||||||||||||| |||| Sbjct: 2573 tgtgaagaccctgacaggcaagaccatcaccctggaggttgag 2615
>gb|BC070919.1| Rattus norvegicus polyubiquitin, mRNA (cDNA clone MGC:91487 IMAGE:7104905), complete cds Length = 1170 Score = 392 bits (198), Expect = e-106 Identities = 379/438 (86%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 529 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 588 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 589 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 648 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||||||||| ||||||||||| Sbjct: 649 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgactacaac 708 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| |||||||| ||||| || |||||||||||| Sbjct: 709 atccagaaggagtcaaccctgcacctggtcctccgcctgaggggcggcatgcagatcttc 768 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 769 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 828 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || ||||| Sbjct: 829 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctcat 887 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||| | Sbjct: 888 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaag 946 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 947 agtcaaccctgcacctgg 964 Score = 377 bits (190), Expect = e-101 Identities = 377/438 (86%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 301 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 360 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 361 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 420 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 421 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 480 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| ||||| || |||||||| ||||| || |||||||||||| Sbjct: 481 atccagaaagagtcaaccctgcaccttgtcctccgcctgaggggcggcatgcagatcttc 540 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||||| |||| ||| | ||||||||||| Sbjct: 541 gtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgag 600 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || ||||| Sbjct: 601 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctcat 659 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| ||||||||||||||||| Sbjct: 660 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgactacaacatccagaagg 718 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 719 agtcaaccctgcacctgg 736 Score = 373 bits (188), Expect = e-100 Identities = 372/432 (86%), Gaps = 2/432 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| ||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 73 atgcaaatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 132 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 133 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 192 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||||||||| ||||||||||| Sbjct: 193 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgactacaac 252 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| |||||||| ||||| || |||||||||||| Sbjct: 253 atccagaaagagtcaaccctgcacctggtcctccgcctgaggggcggcatgcagatcttc 312 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 313 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 372 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || ||||| Sbjct: 373 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctcat 431 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||| | Sbjct: 432 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaag 490 Query: 661 ggtcacccctgc 672 |||| |||||| Sbjct: 491 agtcaaccctgc 502 Score = 228 bits (115), Expect = 2e-56 Identities = 199/227 (87%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 757 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 816 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 817 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 876 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 877 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 936 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| |||||||| |||||||| Sbjct: 937 atccagaaagagtcaaccctgcacctggtcctccgcctgaggggtgg 983 Score = 155 bits (78), Expect = 3e-34 Identities = 178/210 (84%), Gaps = 2/210 (0%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||| ||||||||||||||||| |||||||||||||||||||| |||| ||| | Sbjct: 73 atgcaaatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 132 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 ||||||||||| ||||| ||||| ||||||||||| || |||||||| ||||| |||||| Sbjct: 133 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 192 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||| || ||||| |||| | ||||||||||| || |||||||| ||||| ||| ||||| Sbjct: 193 cagagg-ctcatctttgcc-ggcaagcagctggaagatggccgcaccctctctgactaca 250 Query: 649 acatccagaaggggtcacccctgcccctgg 678 |||||||||| | |||| |||||| ||||| Sbjct: 251 acatccagaaagagtcaaccctgcacctgg 280
>ref|NM_001009202.1| Ovis aries polyubiquitin (LOC443016), mRNA Length = 1102 Score = 392 bits (198), Expect = e-106 Identities = 379/438 (86%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 324 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 383 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 384 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 443 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 444 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 503 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| ||||| || ||||||||||||||||||||| Sbjct: 504 atccagaaggagtcgaccctgcacctggttctccgtctgaggggtggtatgcagatcttc 563 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 564 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 623 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||| ||||||||||| ||||||||| || ||||| Sbjct: 624 aacgtgaaggccaagatccaggataaggaaggcattccccctgaccagcagagg-ctcat 682 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| |||||||||||||||| Sbjct: 683 ctttgcc-ggcaagcagctggaagatggccgcactctttctgattacaacatccagaagg 741 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 742 agtcgaccctgcacctgg 759 Score = 369 bits (186), Expect = 1e-98 Identities = 361/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 552 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 611 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 612 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 671 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 672 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 731 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| ||||| || |||||||||||||||||||| Sbjct: 732 atccagaaggagtcgaccctgcacctggttctccgtctgaggggtggtatgcagatcttt 791 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 792 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 851 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||| ||||||||||| ||||||||| || ||||| Sbjct: 852 aacgtgaaggccaagatccaggataaggaaggcattccccctgaccagcagagg-ctcat 910 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| |||||||| ||||| Sbjct: 911 ctttgcc-ggcaagcagctggaagatggccgcactctttctgattacaacattcagaa 967 Score = 361 bits (182), Expect = 2e-96 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| ||||| ||||| ||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 96 atgcaaatcttcgtgaaaaccctgaccggcaagaccatcaccctggaggtggagcccagt 155 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 156 gacaccatcgagaatgtgaaggccaagatccaggataaggaaggcattccccctgaccag 215 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 216 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 275 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| ||||| | ||||||||||||||||||||| Sbjct: 276 atccagaaggagtcgaccctgcacctggttctccgtatgaggggtggtatgcagatcttc 335 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 336 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 395 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||| ||||||||||| ||||||||| || ||||| Sbjct: 396 aacgtgaaggccaagatccaggataaggaaggcattccccctgaccagcagagg-ctcat 454 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| |||||||||||||||| Sbjct: 455 ctttgcc-ggcaagcagctggaagatggccgcactctttctgattacaacatccagaagg 513 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 514 agtcgaccctgcacctgg 531 Score = 204 bits (103), Expect = 3e-49 Identities = 196/227 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 780 atgcagatctttgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 839 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 840 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 899 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 900 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 959 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 || ||||| ||||| ||||| |||||||| || || || |||||||| Sbjct: 960 attcagaaagagtcgaccctgcacctggtccttcgtcttaggggtgg 1006
>gb|AF038129.1|AF038129 Ovis aries polyubiquitin mRNA, complete cds Length = 1102 Score = 392 bits (198), Expect = e-106 Identities = 379/438 (86%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 324 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 383 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 384 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 443 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 444 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 503 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| ||||| || ||||||||||||||||||||| Sbjct: 504 atccagaaggagtcgaccctgcacctggttctccgtctgaggggtggtatgcagatcttc 563 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 564 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 623 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||| ||||||||||| ||||||||| || ||||| Sbjct: 624 aacgtgaaggccaagatccaggataaggaaggcattccccctgaccagcagagg-ctcat 682 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| |||||||||||||||| Sbjct: 683 ctttgcc-ggcaagcagctggaagatggccgcactctttctgattacaacatccagaagg 741 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 742 agtcgaccctgcacctgg 759 Score = 369 bits (186), Expect = 1e-98 Identities = 361/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 552 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 611 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 612 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 671 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 672 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 731 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| ||||| || |||||||||||||||||||| Sbjct: 732 atccagaaggagtcgaccctgcacctggttctccgtctgaggggtggtatgcagatcttt 791 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 792 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 851 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||| ||||||||||| ||||||||| || ||||| Sbjct: 852 aacgtgaaggccaagatccaggataaggaaggcattccccctgaccagcagagg-ctcat 910 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| |||||||| ||||| Sbjct: 911 ctttgcc-ggcaagcagctggaagatggccgcactctttctgattacaacattcagaa 967 Score = 361 bits (182), Expect = 2e-96 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| ||||| ||||| ||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 96 atgcaaatcttcgtgaaaaccctgaccggcaagaccatcaccctggaggtggagcccagt 155 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 156 gacaccatcgagaatgtgaaggccaagatccaggataaggaaggcattccccctgaccag 215 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 216 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 275 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| ||||| | ||||||||||||||||||||| Sbjct: 276 atccagaaggagtcgaccctgcacctggttctccgtatgaggggtggtatgcagatcttc 335 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 336 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 395 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||| ||||||||||| ||||||||| || ||||| Sbjct: 396 aacgtgaaggccaagatccaggataaggaaggcattccccctgaccagcagagg-ctcat 454 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| |||||||||||||||| Sbjct: 455 ctttgcc-ggcaagcagctggaagatggccgcactctttctgattacaacatccagaagg 513 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 514 agtcgaccctgcacctgg 531 Score = 204 bits (103), Expect = 3e-49 Identities = 196/227 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 780 atgcagatctttgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 839 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 840 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 899 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 900 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 959 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 || ||||| ||||| ||||| |||||||| || || || |||||||| Sbjct: 960 attcagaaagagtcgaccctgcacctggtccttcgtcttaggggtgg 1006
>emb|X60390.1|CGPOLYUGE C.griseus gene for polyubiquitin Length = 1603 Score = 392 bits (198), Expect = e-106 Identities = 364/418 (87%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 633 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 692 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || |||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 693 gacaccatcgagaatgtcaaggccaagatccaggataaggagggcatcccccccgaccag 752 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 753 cagcgactcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 812 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| ||||||||||||||||| |||||||| ||| Sbjct: 813 atccagaaagagtccaccctgcacctggtcctccgcctcaggggtggcatgcagattttc 872 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||||| |||| || | ||||||||||| Sbjct: 873 gtgaagaccctgaccggcaagaccatcaccctagaggtggaacccagtgacaccatcgag 932 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||| ||||||||||| ||||| |||||||||| | ||||| Sbjct: 933 aatgtcaaggccaagatccaggataaggagggcatcccccccgaccagcagc-gactcat 991 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| |||||||||||||| Sbjct: 992 ctttgcc-ggcaagcagctggaagatggccgcactctttctgattacaacatccagaa 1048 Score = 392 bits (198), Expect = e-106 Identities = 364/418 (87%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| || ||||||||||| |||||||||||||||||||| ||||| || || | Sbjct: 405 atgcagattttcgtgaagaccctgaccggcaagaccatcaccctagaggtggaacccagt 464 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || |||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 465 gacaccatcgagaatgtcaaggccaagatccaggataaggagggcatcccccccgaccag 524 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 525 cagcgactcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 584 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 585 atccagaaagagtccaccctgcacctggtcctccgcctcaggggtggcatgcagatcttc 644 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||||| |||| ||| | ||||||||||| Sbjct: 645 gtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgag 704 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||| ||||||||||| ||||| |||||||||| | ||||| Sbjct: 705 aatgtcaaggccaagatccaggataaggagggcatcccccccgaccagcagc-gactcat 763 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| |||||||||||||| Sbjct: 764 ctttgcc-ggcaagcagctggaagatggccgcactctttctgattacaacatccagaa 820 Score = 377 bits (190), Expect = e-101 Identities = 362/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| ||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 177 atgcaaatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 236 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || |||||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 237 gacaccatcgaaaatgtcaaggccaagatccaggataaagagggcatcccccccgaccag 296 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 297 cagcgactcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 356 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| ||||||||||||||||| |||||||| ||| Sbjct: 357 atccagaaagagtccaccctgcacctggtcctccgcctcaggggtggcatgcagattttc 416 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||||| |||| || | ||||||||||| Sbjct: 417 gtgaagaccctgaccggcaagaccatcaccctagaggtggaacccagtgacaccatcgag 476 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||| ||||||||||| ||||| |||||||||| | ||||| Sbjct: 477 aatgtcaaggccaagatccaggataaggagggcatcccccccgaccagcagc-gactcat 535 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| |||||||||||||| Sbjct: 536 ctttgcc-ggcaagcagctggaagatggccgcactctttctgattacaacatccagaa 592 Score = 369 bits (186), Expect = 1e-98 Identities = 361/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| || ||||||||||| |||||||||||||||||||| ||||| || || | Sbjct: 861 atgcagattttcgtgaagaccctgaccggcaagaccatcaccctagaggtggaacccagt 920 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || |||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 921 gacaccatcgagaatgtcaaggccaagatccaggataaggagggcatcccccccgaccag 980 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 981 cagcgactcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 1040 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 1041 atccagaaagagtccaccctgcacctggtcctccgcctcaggggtggcatgcagatcttc 1100 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || ||||||||||||||||| |||| ||| | ||||||||||| Sbjct: 1101 gtgaagaccctgactggcaagaccatcaccctagaggtggagcccagtgacaccatcgag 1160 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || |||||||| ||||| |||||||||| | ||||| Sbjct: 1161 aatgtgaaggccaagatccaggataaagagggcatcccccccgaccagcagc-gactcat 1219 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| |||||||||||||| Sbjct: 1220 ctttgcc-ggcaagcagctggaagatggccgcactctttctgattacaacatccagaa 1276 Score = 236 bits (119), Expect = 1e-58 Identities = 200/227 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1089 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctagaggtggagcccagt 1148 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 1149 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccccgaccag 1208 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 1209 cagcgactcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 1268 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||||||||| |||||||| ||||||||||||||||| Sbjct: 1269 atccagaaagagtccaccctgcacctggtcctccgcctcaggggtgg 1315
>gb|AY098526.1| Ananas comosus tetrameric ubiquitin mRNA, complete cds Length = 1199 Score = 389 bits (196), Expect = e-104 Identities = 365/420 (86%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 495 atgcagatcttcgtcaagaccctgaccggcaagaccatcaccctcgaggtcgagtcctcc 554 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| || ||||| || ||||||||||||||||| ||||| ||||||||| Sbjct: 555 gacaccatcgacaatgttaaggccaaaatccaggacaaggagggtatcccgccggaccag 614 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| || ||||||||| | |||||||||||||| || || ||||||||| Sbjct: 615 cagcgtctgatcttcgcaggcaagcagttggaggacggccgcactctggcggactacaac 674 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| || |||||||| |||||||| ||| | || || |||||||||||| Sbjct: 675 atccagaaggagtcgacgctccacctcgtgctccgtctccgtggcggcatgcagatcttc 734 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||||| |||| ||||| || ||||| |||||| Sbjct: 735 gtgaagaccctgaccggcaagaccatcaccctcgaggtcgagtcctccgacacgatcgac 794 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 |||||||| || ||||||||||||||||||||||| || ||||||||||||||| ||||| Sbjct: 795 aacgtcaaagctaagatccaggacaaggagggcatcccgccggaccagcagcgg-ctcat 853 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | || |||||| | || || ||||| || || || | ||||||||||||||||| Sbjct: 854 ctttgcc-ggtaagcagttggaggacggccgcactctggcggactacaacatccagaagg 912 Score = 375 bits (189), Expect = e-100 Identities = 312/353 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 267 atgcagatcttcgtcaagaccctgaccggcaagaccatcaccctcgaggtcgagtcctcc 326 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| |||||||| || ||||||||||||||||| ||||||||||||||| Sbjct: 327 gacaccatcgacaatgtcaaggccaaaatccaggacaaggaggggatccccccggaccag 386 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| || ||||||||| | |||||||||||||| ||||| ||||||||| Sbjct: 387 cagcgtctgatcttcgcaggcaagcagttggaggacggccgcactcttgcggactacaac 446 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| || |||||||| |||||||| ||| | || || |||||||||||| Sbjct: 447 atccagaaggagtcgacgctccacctcgtgctccgtctccgtggcggcatgcagatcttc 506 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| |||||||||||||||||||| |||| ||||| || |||||||||||| Sbjct: 507 gtcaagaccctgaccggcaagaccatcaccctcgaggtcgagtcctccgacaccatcgac 566 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcg 593 || || ||||| || ||||||||||||||||| || || |||||||||||||| Sbjct: 567 aatgttaaggccaaaatccaggacaaggagggtatcccgccggaccagcagcg 619 Score = 359 bits (181), Expect = 1e-95 Identities = 363/422 (86%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 ||||||| ||||| || |||||||| |||||||||||||||||||| ||||| ||||| | Sbjct: 37 agatgcaaatcttcgtcaagaccctgaccggcaagaccatcaccctcgaggtcgagtcgt 96 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 | ||||| |||||||| |||||||| || ||||||||||||||||| ||||||||||||| Sbjct: 97 ccgacaccatcgacaatgtcaaggccaaaatccaggacaaggaggggatccccccggacc 156 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||| | ||||| || ||||||||| | |||||||||||||| || || ||||||| Sbjct: 157 agcagcggttgatcttcgccggcaagcagttggaggacggccgcactctcgcggactaca 216 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||| || |||||||| || ||||| ||| | || || |||||||||| Sbjct: 217 acatccagaaggagtcgacgctccacctcgtcctccgtctccgtggcggcatgcagatct 276 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 |||| |||||||| |||||||||||||||||||| |||| ||||| || |||||||||| Sbjct: 277 tcgtcaagaccctgaccggcaagaccatcaccctcgaggtcgagtcctccgacaccatcg 336 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 |||| |||||||| || ||||||||||||||||| || |||||||||||||||| | || Sbjct: 337 acaatgtcaaggccaaaatccaggacaaggaggggatccccccggaccagcagc-gtctg 395 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || || | | ||||||||| | || || ||||| || ||||| | ||||||||||||||| Sbjct: 396 atcttcg-caggcaagcagttggaggacggccgcactcttgcggactacaacatccagaa 454 Query: 659 gg 660 || Sbjct: 455 gg 456 Score = 266 bits (134), Expect = 1e-67 Identities = 188/206 (91%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 723 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctcgaggtcgagtcctcc 782 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||| Sbjct: 783 gacacgatcgacaacgtcaaagctaagatccaggacaaggagggcatcccgccggaccag 842 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||| || |||||| | |||||||||||||| || || ||||||||| Sbjct: 843 cagcggctcatctttgccggtaagcagttggaggacggccgcactctggcggactacaac 902 Query: 421 atccagaaggagtccaccctccacct 446 ||||||||||| || ||||||||||| Sbjct: 903 atccagaaggaatcaaccctccacct 928
>gb|AF506969.1| Equus caballus ubiquitin mRNA, complete cds Length = 1157 Score = 387 bits (195), Expect = e-104 Identities = 365/420 (86%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| |||||||||||||||||||| ||||| ||| || Sbjct: 119 atgcagatctttgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagc 178 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 179 gacaccatcgagaacgtcaaggccaagatccaggataaggagggcatcccccccgaccag 238 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| | || |||||| Sbjct: 239 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttccgattacaac 298 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| ||||||||||| ||||| || || ||||||||||| ||| Sbjct: 299 atccagaaagagtcgaccctgcacctggtgctgcgcctgagaggcggtatgcagattttc 358 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 359 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagcgacaccatcgag 418 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| ||||||||||| ||||||||||| ||||| ||||||||| || ||||| Sbjct: 419 aacgtcaaggccaagatccaggataaggagggcatcccccccgaccagcagagg-ctcat 477 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || ||||| || ||||| ||| ||||||||||||||||| Sbjct: 478 ctttg-caggcaagcagctggaggatgggcgcaccctgtctgactacaacatccagaagg 536 Score = 339 bits (171), Expect = 9e-90 Identities = 359/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| || ||||||||||| |||||||||||||||||||| ||||| ||| || Sbjct: 347 atgcagattttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagc 406 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 407 gacaccatcgagaacgtcaaggccaagatccaggataaggagggcatcccccccgaccag 466 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| ||||| || |||||||| ||||||||||| Sbjct: 467 cagaggctcatctttgcaggcaagcagctggaggatgggcgcaccctgtctgactacaac 526 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||||||||| || |||||||| || || ||||| || || |||||||| ||| Sbjct: 527 atccagaaggagtccactctgcacctggttctgcgtctcagaggcgggatgcagattttc 586 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||| |||||||||| ||| | ||||||||||| Sbjct: 587 gtgaagaccctgaccggcaagaccattaccctggaggtggagcccagcgacaccatcgag 646 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| ||||||||||| ||||| ||||||||| || |||| Sbjct: 647 aatgtgaaggccaagatccaggataaggagggcatcccccccgaccagcagagg-ttcat 705 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 706 ctttg-caggcaagcagctggaggatgggcgcaccctgtctgattacaacatccagaagg 764 Score = 331 bits (167), Expect = 2e-87 Identities = 375/443 (84%), Gaps = 2/443 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 ||||||||| || ||||||||||| |||||||||||||| ||||| ||||| ||| || Sbjct: 574 gatgcagattttcgtgaagaccctgaccggcaagaccattaccctggaggtggagcccag 633 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| ||||| || || ||||| ||||||||||| ||||||||||||||||| ||||| Sbjct: 634 cgacaccatcgagaatgtgaaggccaagatccaggataaggagggcatcccccccgacca 693 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | |||||||||| ||||||||||| ||||| || |||||||| |||| ||||| Sbjct: 694 gcagaggttcatctttgcaggcaagcagctggaggatgggcgcaccctgtctgattacaa 753 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| || || ||||| ||||| |||||||| || Sbjct: 754 catccagaaggagtccactctgcacctggttctgcgtctcagaggtgggatgcagatttt 813 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 814 cgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagcgacaccatcga 873 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || || ||||| ||||||||||| ||||||||||| ||||| ||||||||| || |||| Sbjct: 874 gaatgtgaaggccaagatccaggataaggagggcatcccccccgaccagcagagg-ctca 932 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| || ||| ||| |||||||||||||| Sbjct: 933 tctttg-caggcaagcagctggaagatggccgcactctttctgattacaacatccagaaa 991 Query: 660 gggtcacccctgcccctggngct 682 | ||| |||||| ||||| ||| Sbjct: 992 gagtcgaccctgcacctggtgct 1014 Score = 222 bits (112), Expect = 1e-54 Identities = 199/228 (87%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 ||||||||| || ||||||||||| |||||||||||||||||||| ||||| ||| || Sbjct: 802 gatgcagattttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccag 861 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| ||||| || || ||||| ||||||||||| ||||||||||||||||| ||||| Sbjct: 862 cgacaccatcgagaatgtgaaggccaagatccaggataaggagggcatcccccccgacca 921 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| ||||| Sbjct: 922 gcagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgattacaa 981 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 ||||||||| ||||| ||||| |||||||||||||| ||||||||||| Sbjct: 982 catccagaaagagtcgaccctgcacctggtgctccgtctcaggggtgg 1029 Score = 155 bits (78), Expect = 3e-34 Identities = 181/214 (84%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||||||||| ||||||||||| ||||||||||||||||||||||||| ||| | Sbjct: 119 atgcagatctttgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagc 178 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 ||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||| |||||| Sbjct: 179 gacaccatcgagaacgtcaaggccaagatccaggataaggagggcatcccccccgaccag 238 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||| || ||||| |||| | ||||||||||| || |||||||| || ||| | | |||| Sbjct: 239 cagagg-ctcatctttg-caggcaagcagctggaagatggccgcactctttccgattaca 296 Query: 649 acatccagaaggggtcacccctgcccctggngct 682 |||||||||| | ||| |||||| ||||| ||| Sbjct: 297 acatccagaaagagtcgaccctgcacctggtgct 330
>gb|BC060312.1| Rattus norvegicus polyubiquitin, mRNA (cDNA clone MGC:72686 IMAGE:6919609), complete cds Length = 1199 Score = 385 bits (194), Expect = e-103 Identities = 378/438 (86%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 559 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 618 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 619 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 678 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 679 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 738 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| |||||||| ||||| || |||||||||||| Sbjct: 739 atccagaaggagtcaaccctgcacctggtcctccgcctgaggggcggcatgcagatcttc 798 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 799 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 858 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || ||||| Sbjct: 859 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctcat 917 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||| | Sbjct: 918 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaag 976 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 977 agtcaaccctgcacctgg 994 Score = 373 bits (188), Expect = e-100 Identities = 372/432 (86%), Gaps = 2/432 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| ||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 103 atgcaaatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 162 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 163 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 222 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||||||||| ||||||||||| Sbjct: 223 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgactacaac 282 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| |||||||| ||||| || |||||||||||| Sbjct: 283 atccagaaagagtcaaccctgcacctggtcctccgcctgaggggcggcatgcagatcttc 342 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 343 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 402 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || ||||| Sbjct: 403 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctcat 461 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||| | Sbjct: 462 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaag 520 Query: 661 ggtcacccctgc 672 |||| |||||| Sbjct: 521 agtcaaccctgc 532 Score = 369 bits (186), Expect = 1e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 331 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 390 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 391 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 450 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 451 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 510 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| ||||| || |||||||| ||||| || |||||||||||| Sbjct: 511 atccagaaagagtcaaccctgcaccttgtcctccgcctgaggggcggcatgcagatcttc 570 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||||| |||| ||| | ||||||||||| Sbjct: 571 gtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgag 630 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || ||||| Sbjct: 631 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctcat 689 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 690 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaagg 748 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 749 agtcaaccctgcacctgg 766 Score = 228 bits (115), Expect = 2e-56 Identities = 199/227 (87%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 787 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 846 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 847 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 906 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 907 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 966 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| |||||||| |||||||| Sbjct: 967 atccagaaagagtcaaccctgcacctggtcctccgcctgaggggtgg 1013 Score = 155 bits (78), Expect = 3e-34 Identities = 178/210 (84%), Gaps = 2/210 (0%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||| ||||||||||||||||| |||||||||||||||||||| |||| ||| | Sbjct: 103 atgcaaatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 162 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 ||||||||||| ||||| ||||| ||||||||||| || |||||||| ||||| |||||| Sbjct: 163 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 222 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||| || ||||| |||| | ||||||||||| || |||||||| ||||| ||| ||||| Sbjct: 223 cagagg-ctcatctttgcc-ggcaagcagctggaagatggccgcaccctctctgactaca 280 Query: 649 acatccagaaggggtcacccctgcccctgg 678 |||||||||| | |||| |||||| ||||| Sbjct: 281 acatccagaaagagtcaaccctgcacctgg 310
>ref|NM_138895.1| Rattus norvegicus polyubiquitin (Ubb), mRNA Length = 1115 Score = 385 bits (194), Expect = e-103 Identities = 378/438 (86%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 520 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 579 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 580 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 639 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 640 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 699 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| |||||||| ||||| || |||||||||||| Sbjct: 700 atccagaaggagtcaaccctgcacctggtcctccgcctgaggggcggcatgcagatcttc 759 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 760 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 819 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || ||||| Sbjct: 820 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctcat 878 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||| | Sbjct: 879 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaag 937 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 938 agtcaaccctgcacctgg 955 Score = 373 bits (188), Expect = e-100 Identities = 372/432 (86%), Gaps = 2/432 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| ||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 64 atgcaaatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 123 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 124 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 183 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||||||||| ||||||||||| Sbjct: 184 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgactacaac 243 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| |||||||| ||||| || |||||||||||| Sbjct: 244 atccagaaagagtcaaccctgcacctggtcctccgcctgaggggcggcatgcagatcttc 303 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 304 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 363 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || ||||| Sbjct: 364 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctcat 422 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||| | Sbjct: 423 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaag 481 Query: 661 ggtcacccctgc 672 |||| |||||| Sbjct: 482 agtcaaccctgc 493 Score = 369 bits (186), Expect = 1e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 292 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 351 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 352 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 411 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 412 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 471 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| ||||| || |||||||| ||||| || |||||||||||| Sbjct: 472 atccagaaagagtcaaccctgcaccttgtcctccgcctgaggggcggcatgcagatcttc 531 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||||| |||| ||| | ||||||||||| Sbjct: 532 gtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgag 591 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || ||||| Sbjct: 592 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctcat 650 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 651 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaagg 709 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 710 agtcaaccctgcacctgg 727 Score = 228 bits (115), Expect = 2e-56 Identities = 199/227 (87%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 748 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 807 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 808 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 867 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 868 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 927 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| |||||||| |||||||| Sbjct: 928 atccagaaagagtcaaccctgcacctggtcctccgcctgaggggtgg 974 Score = 155 bits (78), Expect = 3e-34 Identities = 178/210 (84%), Gaps = 2/210 (0%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||| ||||||||||||||||| |||||||||||||||||||| |||| ||| | Sbjct: 64 atgcaaatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 123 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 ||||||||||| ||||| ||||| ||||||||||| || |||||||| ||||| |||||| Sbjct: 124 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 183 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||| || ||||| |||| | ||||||||||| || |||||||| ||||| ||| ||||| Sbjct: 184 cagagg-ctcatctttgcc-ggcaagcagctggaagatggccgcaccctctctgactaca 241 Query: 649 acatccagaaggggtcacccctgcccctgg 678 |||||||||| | |||| |||||| ||||| Sbjct: 242 acatccagaaagagtcaaccctgcacctgg 271
>dbj|D16554.1|RATPOLYU Rattus norvegicus mRNA for polyubiquitin, complete cds, four repetitive ubiquitins in tandem Length = 1115 Score = 385 bits (194), Expect = e-103 Identities = 378/438 (86%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 520 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 579 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 580 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 639 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 640 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 699 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| |||||||| ||||| || |||||||||||| Sbjct: 700 atccagaaggagtcaaccctgcacctggtcctccgcctgaggggcggcatgcagatcttc 759 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 760 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 819 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || ||||| Sbjct: 820 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctcat 878 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||| | Sbjct: 879 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaag 937 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 938 agtcaaccctgcacctgg 955 Score = 373 bits (188), Expect = e-100 Identities = 372/432 (86%), Gaps = 2/432 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| ||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 64 atgcaaatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 123 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 124 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 183 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||||||||| ||||||||||| Sbjct: 184 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgactacaac 243 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| |||||||| ||||| || |||||||||||| Sbjct: 244 atccagaaagagtcaaccctgcacctggtcctccgcctgaggggcggcatgcagatcttc 303 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 304 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 363 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || ||||| Sbjct: 364 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctcat 422 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||| | Sbjct: 423 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaag 481 Query: 661 ggtcacccctgc 672 |||| |||||| Sbjct: 482 agtcaaccctgc 493 Score = 369 bits (186), Expect = 1e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 292 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 351 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 352 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 411 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 412 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 471 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| ||||| || |||||||| ||||| || |||||||||||| Sbjct: 472 atccagaaagagtcaaccctgcaccttgtcctccgcctgaggggcggcatgcagatcttc 531 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||||| |||| ||| | ||||||||||| Sbjct: 532 gtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgag 591 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || ||||| Sbjct: 592 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctcat 650 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 651 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaagg 709 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 710 agtcaaccctgcacctgg 727 Score = 228 bits (115), Expect = 2e-56 Identities = 199/227 (87%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 748 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 807 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 808 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 867 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 868 cagaggctcatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 927 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| |||||||| |||||||| Sbjct: 928 atccagaaagagtcaaccctgcacctggtcctccgcctgaggggtgg 974 Score = 155 bits (78), Expect = 3e-34 Identities = 178/210 (84%), Gaps = 2/210 (0%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||| ||||||||||||||||| |||||||||||||||||||| |||| ||| | Sbjct: 64 atgcaaatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 123 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 ||||||||||| ||||| ||||| ||||||||||| || |||||||| ||||| |||||| Sbjct: 124 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 183 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||| || ||||| |||| | ||||||||||| || |||||||| ||||| ||| ||||| Sbjct: 184 cagagg-ctcatctttgcc-ggcaagcagctggaagatggccgcaccctctctgactaca 241 Query: 649 acatccagaaggggtcacccctgcccctgg 678 |||||||||| | |||| |||||| ||||| Sbjct: 242 acatccagaaagagtcaaccctgcacctgg 271
>gb|AY099133.1| Cercomonas edax isolate pub5 polyubiquitin gene, partial cds Length = 532 Score = 383 bits (193), Expect = e-103 Identities = 361/416 (86%), Gaps = 8/416 (1%) Strand = Plus / Plus Query: 261 cctcaccggcaagaccatcacccttgaggttgagtcctctgacacgatcgacaacgtcaa 320 |||||||||||||||||||||||| || || ||| ||||||||| ||||| ||||| || Sbjct: 1 cctcaccggcaagaccatcaccctggacgtggagagctctgacaccatcgagaacgtgaa 60 Query: 321 ggcgaagatccaggacaaggagggcatccccccggaccagcagcgcctcatctttgctgg 380 | ||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 61 gcagaagatccaggacaaggagggcatccccccggatcagcagcgcctcatcttcgccgg 120 Query: 381 caagcagcttgaggacggccgcacccttgctgactacaacatccagaaggagtccaccct 440 ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 121 caagcagctcgaggacggccgcaccctggctgactacaacatccagaaggagtcgaccct 180 Query: 441 ccacctggtgctccgcctcagggg------tggtatgcagatcttcgtgaagaccctcac 494 ||||| ||||| |||||| | || ||| |||||||||||||| ||||||||||| Sbjct: 181 tcaccttgtgctgcgcctccgtggtggctctggcatgcagatcttcgtcaagaccctcac 240 Query: 495 cggcaagaccatcaccctggagggtgagtcttcggacaccatcgacaacgtcaaggcgaa 554 ||||||||||||||||||||| | ||| || ||||||||||| ||||| ||| ||| Sbjct: 241 cggcaagaccatcaccctggacgtggagagctctgacaccatcgagaacgtgaagcagaa 300 Query: 555 gatccaggacaaggagggcattcccccggaccagcagcggcctcatntttgncgggcaag 614 ||||||||||||||||||||| |||||||| ||||||| ||||||| || | | |||||| Sbjct: 301 gatccaggacaaggagggcatccccccggatcagcagc-gcctcatcttcgcc-ggcaag 358 Query: 615 cagcttgangatggccgaacccttgctgnctacaacatccagaaggggtcacccct 670 ||||| || || ||||| ||||| |||| ||||||||||||||||| |||| |||| Sbjct: 359 cagctcgaggacggccgcaccctggctgactacaacatccagaaggagtcaaccct 414 Score = 297 bits (150), Expect = 3e-77 Identities = 248/281 (88%), Gaps = 6/281 (2%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||||||||||||||||||||| || || ||| |||| Sbjct: 215 atgcagatcttcgtcaagaccctcaccggcaagaccatcaccctggacgtggagagctct 274 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 275 gacaccatcgagaacgtgaagcagaagatccaggacaaggagggcatccccccggatcag 334 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 335 cagcgcctcatcttcgccggcaagcagctcgaggacggccgcaccctggctgactacaac 394 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcagggg------tggtatgcag 474 |||||||||||||| ||||| ||||| ||||| || || | || ||| |||||| Sbjct: 395 atccagaaggagtcaacccttcaccttgtgctgcgtctgcgcggtggctctggcatgcag 454 Query: 475 atcttcgtgaagaccctcaccggcaagaccatcaccctgga 515 |||||||| |||||||||||||||||||||||||||||||| Sbjct: 455 atcttcgtcaagaccctcaccggcaagaccatcaccctgga 495 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||||||||||||||||||||| || || ||| |||| Sbjct: 449 atgcagatcttcgtcaagaccctcaccggcaagaccatcaccctggacgtggagagctct 508 Query: 301 gacacgatcgacaacgt 317 ||||||||||| ||||| Sbjct: 509 gacacgatcgagaacgt 525
>emb|X08013.1|CSUBIQ Chinese hamster mRNA for ubiquitin Length = 752 Score = 377 bits (190), Expect = e-101 Identities = 362/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| ||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 85 atgcaaatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 144 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || |||||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 145 gacaccatcgaaaatgtcaaggccaagatccaggataaagagggcatcccccccgaccag 204 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 205 cagcgactcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 264 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| ||||||||||||||||| |||||||| ||| Sbjct: 265 atccagaaagagtccaccctgcacctggtcctccgcctcaggggtggcatgcagattttc 324 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||||| |||| || | ||||||||||| Sbjct: 325 gtgaagaccctgaccggcaagaccatcaccctagaggtggaacccagtgacaccatcgag 384 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||| ||||||||||| ||||| |||||||||| | ||||| Sbjct: 385 aatgtcaaggccaagatccaggataaggagggcatcccccccgaccagcagc-gactcat 443 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| |||||||||||||| Sbjct: 444 ctttgcc-ggcaagcagctggaagatggccgcactctttctgattacaacatccagaa 500 Score = 369 bits (186), Expect = 1e-98 Identities = 361/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| || ||||||||||| |||||||||||||||||||| ||||| || || | Sbjct: 313 atgcagattttcgtgaagaccctgaccggcaagaccatcaccctagaggtggaacccagt 372 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || |||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 373 gacaccatcgagaatgtcaaggccaagatccaggataaggagggcatcccccccgaccag 432 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 433 cagcgactcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 492 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 493 atccagaaagagtccaccctgcacctggtcctccgcctcaggggtggcatgcagatcttc 552 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || ||||||||||||||||| |||| ||| | ||||||||||| Sbjct: 553 gtgaagaccctgactggcaagaccatcaccctagaggtggagcccagtgacaccatcgag 612 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || |||||||| ||||| |||||||||| | ||||| Sbjct: 613 aatgtgaaggccaagatccaggataaagagggcatcccccccgaccagcagc-gactcat 671 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| |||||||||||||| Sbjct: 672 ctttgcc-ggcaagcagctggaagatggccgcactctttctgattacaacatccagaa 728 Score = 208 bits (105), Expect = 2e-50 Identities = 183/209 (87%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 541 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctagaggtggagcccagt 600 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 601 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccccgaccag 660 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 661 cagcgactcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 720 Query: 421 atccagaaggagtccaccctccacctggt 449 |||||||| ||||||||||| |||||||| Sbjct: 721 atccagaaagagtccaccctgcacctggt 749
>gb|AF361365.1| Oncorhynchus mykiss polyubiquitin mRNA, complete cds Length = 1162 Score = 375 bits (189), Expect = e-100 Identities = 312/353 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||| || | Sbjct: 513 atgcagatcttcgtgaagacccttaccggcaagaccatcaccctggaggttgagcccagt 572 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 573 gacaccattgagaatgtgaaggccaagatccaggacaaggagggcatccccccagaccag 632 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||| | |||||||| ||||||||||| || || || ||||| || | ||||||||| Sbjct: 633 cagcgcttgatctttgccggcaagcagctggaagatggtcgcactctctccgactacaac 692 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||||||||||||||| || |||||||| || ||||| ||||||||||||||| Sbjct: 693 atccagaaggagtccaccctccatcttgtgctccgtctgaggggaggtatgcagatcttc 752 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 753 gtgaagacccttaccggcaagaccatcaccctggaggtcgagcccagtgacaccatcgag 812 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcg 593 ||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 813 aacgtcaaggccaagatccaggacaaggagggcatccccccagaccagcagcg 865 Score = 357 bits (180), Expect = 4e-95 Identities = 361/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||| || | Sbjct: 285 atgcagatcttcgtgaagacccttaccggcaagaccatcaccctggaggttgagcccagt 344 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 345 gacaccattgagaatgtgaaggccaagatccaggacaaggagggcatccccccagaccag 404 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||| | |||||||| ||||||||||| || || || ||||| || | ||||||||| Sbjct: 405 cagcgcttgatctttgccggcaagcagctggaagatggtcgcactctctccgactacaac 464 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||||||||||||||| || ||||| || || ||||| ||||||||||||||| Sbjct: 465 atccagaaggagtccaccctccatcttgtgcttcgtctgaggggaggtatgcagatcttc 524 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| |||| | |||||||| || Sbjct: 525 gtgaagacccttaccggcaagaccatcaccctggaggttgagcccagtgacaccattgag 584 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||||||||| ||||| |||||||||| || | || Sbjct: 585 aatgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagc-gcttgat 643 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || ||||| || || || | | ||||||||||||||||| Sbjct: 644 ctttgcc-ggcaagcagctggaagatggtcgcactctctccgactacaacatccagaagg 702 Score = 353 bits (178), Expect = 6e-94 Identities = 362/422 (85%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||||||||||||||| || |||||||||||||||||||| ||||| ||| || Sbjct: 55 agatgcagatctttgtgaagacacttaccggcaagaccatcaccctggaggtcgagccca 114 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 |||||| ||||| || || ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 115 gtgacaccatcgagaatgtgaaggccaagatccaggacaaggagggcatccccccagacc 174 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 |||||||| | ||||| || || |||||||| || || || ||||| || | ||||| | Sbjct: 175 agcagcgcttgatcttcgccggtaagcagctggaagatggtcgcactctctccgactata 234 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 ||||||||||||||||||||||||| || |||||||| || ||||||||||||||||||| Sbjct: 235 acatccagaaggagtccaccctccatcttgtgctccgtctgaggggtggtatgcagatct 294 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 ||||||||||||| ||||||||||||||||||||||||| |||| | |||||||| | Sbjct: 295 tcgtgaagacccttaccggcaagaccatcaccctggaggttgagcccagtgacaccattg 354 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 | || || ||||| ||||||||||||||||||||||| ||||| |||||||||| || | Sbjct: 355 agaatgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagc-gcttg 413 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| | ||||||||||| || ||||| || || || | | ||||||||||||||| Sbjct: 414 atctttgcc-ggcaagcagctggaagatggtcgcactctctccgactacaacatccagaa 472 Query: 659 gg 660 || Sbjct: 473 gg 474 Score = 224 bits (113), Expect = 4e-55 Identities = 185/209 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 741 atgcagatcttcgtgaagacccttaccggcaagaccatcaccctggaggtcgagcccagt 800 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 801 gacaccatcgagaacgtcaaggccaagatccaggacaaggagggcatccccccagaccag 860 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||| | ||||| ||||| |||||||| || || || ||||| || ||||||||||| Sbjct: 861 cagcgcttgatcttcgctggtaagcagctggaagatggtcgcacgctctctgactacaac 920 Query: 421 atccagaaggagtccaccctccacctggt 449 ||||||||||||||||| || |||||||| Sbjct: 921 atccagaaggagtccactcttcacctggt 949
>gb|BC062397.1| Rattus norvegicus cDNA clone IMAGE:5623273, **** WARNING: chimeric clone **** Length = 3040 Score = 375 bits (189), Expect = e-100 Identities = 377/438 (86%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 2102 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 2161 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 2162 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 2221 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| ||||||||||| Sbjct: 2222 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtctgactacaac 2281 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 2282 atccagaaggagtccaccctgcacctggtcctgcgcctcagagggggcatgcagatcttt 2341 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 2342 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 2401 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 2402 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 2460 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 2461 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 2519 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 2520 agtccaccctgcacctgg 2537 Score = 375 bits (189), Expect = e-100 Identities = 377/438 (86%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1418 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1477 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1478 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1537 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1538 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1597 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 1598 atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt 1657 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1658 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 1717 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1718 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1776 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| ||||||||||||||||| Sbjct: 1777 ctttg-caggcaagcagctggaagatggccgcaccctgtctgactacaacatccagaagg 1835 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 1836 agtccaccctgcacctgg 1853 Score = 371 bits (187), Expect = 3e-99 Identities = 363/420 (86%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1646 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1705 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1706 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1765 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| ||||||||||| Sbjct: 1766 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtctgactacaac 1825 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 1826 atccagaaggagtccaccctgcacctggtcctgcgcctcagagggggcatgcagatcttt 1885 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1886 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 1945 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1946 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 2004 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 2005 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 2063 Score = 367 bits (185), Expect = 4e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 2330 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 2389 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 2390 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 2449 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 2450 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2509 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 2510 atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt 2569 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 2570 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 2629 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 2630 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 2688 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 2689 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 2747 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 2748 agtccaccctgcacctgg 2765 Score = 367 bits (185), Expect = 4e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1874 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1933 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1934 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1993 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1994 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2053 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||| | |||||||| || |||||||| || || ||||||||||| Sbjct: 2054 atccagaaggagtccaccttgcacctggtccttcgcctcagagggggcatgcagatcttt 2113 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 2114 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 2173 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 2174 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 2232 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| ||||||||||||||||| Sbjct: 2233 ctttg-caggcaagcagctggaagatggccgcaccctgtctgactacaacatccagaagg 2291 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 2292 agtccaccctgcacctgg 2309 Score = 359 bits (181), Expect = 1e-95 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1190 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1249 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1250 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1309 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | || |||||| Sbjct: 1310 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagattacaac 1369 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 1370 atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt 1429 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1430 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 1489 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1490 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1548 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 1549 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 1607 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 1608 agtccaccctgcacctgg 1625 Score = 359 bits (181), Expect = 1e-95 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 278 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 337 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 338 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 397 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 398 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 457 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 458 atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt 517 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 518 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 577 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 578 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 636 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 637 ctttg-caggcaagcagctggaagatggccgcaccctgtcagattacaacatccagaagg 695 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 696 agtccaccctgcacctgg 713 Score = 355 bits (179), Expect = 1e-94 Identities = 361/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 734 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 793 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 794 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 853 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 854 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 913 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||| | |||||||| || |||||||| || || ||||||||||| Sbjct: 914 atccagaaggagtccaccttgcacctggtccttcgcctcagagggggcatgcagatcttt 973 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 974 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 1033 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1034 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1092 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 1093 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 1151 Score = 355 bits (179), Expect = 1e-94 Identities = 361/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 506 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 565 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 566 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 625 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | || |||||| Sbjct: 626 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagattacaac 685 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 686 atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt 745 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 746 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 805 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 806 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 864 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 865 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 923 Score = 351 bits (177), Expect = 2e-93 Identities = 374/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 962 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1021 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1022 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1081 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1082 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1141 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||| | |||||||| || |||||||| || || ||||||||||| Sbjct: 1142 atccagaaggagtccaccttgcacctggtccttcgcctcagagggggcatgcagatcttt 1201 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1202 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 1261 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1262 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1320 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 1321 ctttg-caggcaagcagctggaagatggccgcaccctgtcagattacaacatccagaagg 1379 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 1380 agtccaccctgcacctgg 1397 Score = 335 bits (169), Expect = 1e-88 Identities = 372/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||| ||| | || || |||||||||||||| ||||| ||| || | Sbjct: 50 atgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccagt 109 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 110 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 169 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 170 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 229 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||| | |||||||| || |||||||| || || ||||||||||| Sbjct: 230 atccagaaggagtccaccttgcacctggtccttcgcctcagagggggcatgcagatcttt 289 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 290 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 349 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 350 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 408 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 409 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 467 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 468 agtccaccctgcacctgg 485 Score = 283 bits (143), Expect = 5e-73 Identities = 242/275 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 2558 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 2617 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 2618 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 2677 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 2678 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2737 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 2738 atccagaaggagtccaccctgcacctggtcctgcgcctcagagggggcatgcagatcttt 2797 Query: 481 gtgaagaccctcaccggcaagaccatcaccctgga 515 ||||||||||| || |||||||||||||| ||||| Sbjct: 2798 gtgaagaccctgacaggcaagaccatcactctgga 2832
>ref|XM_579409.1| PREDICTED: Rattus norvegicus hypothetical gene supported by NM_017314 (LOC497684), mRNA Length = 2545 Score = 375 bits (189), Expect = e-100 Identities = 377/438 (86%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1630 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1689 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1690 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1749 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| ||||||||||| Sbjct: 1750 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtctgactacaac 1809 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 1810 atccagaaggagtccaccctgcacctggtcctgcgcctcagagggggcatgcagatcttt 1869 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1870 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 1929 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1930 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1988 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 1989 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 2047 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 2048 agtccaccctgcacctgg 2065 Score = 375 bits (189), Expect = e-100 Identities = 377/438 (86%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 946 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1005 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1006 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1065 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1066 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1125 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 1126 atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt 1185 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1186 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 1245 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1246 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1304 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| ||||||||||||||||| Sbjct: 1305 ctttg-caggcaagcagctggaagatggccgcaccctgtctgactacaacatccagaagg 1363 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 1364 agtccaccctgcacctgg 1381 Score = 371 bits (187), Expect = 3e-99 Identities = 363/420 (86%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1174 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1233 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1234 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1293 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| ||||||||||| Sbjct: 1294 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtctgactacaac 1353 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 1354 atccagaaggagtccaccctgcacctggtcctgcgcctcagagggggcatgcagatcttt 1413 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1414 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 1473 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1474 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1532 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 1533 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 1591 Score = 367 bits (185), Expect = 4e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1858 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1917 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1918 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1977 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1978 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2037 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 2038 atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt 2097 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 2098 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 2157 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 2158 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 2216 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 2217 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 2275 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 2276 agtccaccctgcacctgg 2293 Score = 367 bits (185), Expect = 4e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1402 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1461 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1462 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1521 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1522 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1581 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||| | |||||||| || |||||||| || || ||||||||||| Sbjct: 1582 atccagaaggagtccaccttgcacctggtccttcgcctcagagggggcatgcagatcttt 1641 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1642 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 1701 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1702 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1760 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| ||||||||||||||||| Sbjct: 1761 ctttg-caggcaagcagctggaagatggccgcaccctgtctgactacaacatccagaagg 1819 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 1820 agtccaccctgcacctgg 1837 Score = 359 bits (181), Expect = 1e-95 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 718 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 777 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 778 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 837 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | || |||||| Sbjct: 838 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagattacaac 897 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 898 atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt 957 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 958 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 1017 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1018 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1076 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 1077 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 1135 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 1136 agtccaccctgcacctgg 1153 Score = 355 bits (179), Expect = 1e-94 Identities = 361/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 262 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 321 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 322 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 381 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 382 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 441 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||| | |||||||| || |||||||| || || ||||||||||| Sbjct: 442 atccagaaggagtccaccttgcacctggtccttcgcctcagagggggcatgcagatcttt 501 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 502 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 561 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 562 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 620 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 621 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 679 Score = 351 bits (177), Expect = 2e-93 Identities = 374/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 490 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 549 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 550 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 609 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 610 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 669 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||| | |||||||| || |||||||| || || ||||||||||| Sbjct: 670 atccagaaggagtccaccttgcacctggtccttcgcctcagagggggcatgcagatcttt 729 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 730 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 789 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 790 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 848 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 849 ctttg-caggcaagcagctggaagatggccgcaccctgtcagattacaacatccagaagg 907 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 908 agtccaccctgcacctgg 925 Score = 331 bits (167), Expect = 2e-87 Identities = 358/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||| ||| | || || |||||||||||||| ||||| ||| || | Sbjct: 34 atgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccagt 93 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 94 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 153 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | || |||||| Sbjct: 154 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagattacaac 213 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 214 atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt 273 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 274 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 333 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 334 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 392 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 393 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 451 Score = 283 bits (143), Expect = 5e-73 Identities = 242/275 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 2086 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 2145 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 2146 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 2205 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 2206 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2265 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 2266 atccagaaggagtccaccctgcacctggtcctgcgcctcagagggggcatgcagatcttt 2325 Query: 481 gtgaagaccctcaccggcaagaccatcaccctgga 515 ||||||||||| || |||||||||||||| ||||| Sbjct: 2326 gtgaagaccctgacaggcaagaccatcactctgga 2360 Score = 113 bits (57), Expect = 1e-21 Identities = 173/210 (82%), Gaps = 2/210 (0%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||||||||| ||||| ||| | || || ||||||||||||||||||| ||| | Sbjct: 34 atgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccagt 93 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 |||||||| || || |||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 94 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 153 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||| || || || |||| | ||||||||||| || |||||||| ||||| | | |||| Sbjct: 154 cagagg-ctgatctttg-caggcaagcagctggaagatggccgcaccctgtcagattaca 211 Query: 649 acatccagaaggggtcacccctgcccctgg 678 |||||||||||| ||| |||||| ||||| Sbjct: 212 acatccagaaggagtccaccctgcacctgg 241
>dbj|AP006454.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1472F02 Length = 55065 Score = 375 bits (189), Expect = e-100 Identities = 365/422 (86%), Gaps = 2/422 (0%) Strand = Plus / Minus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| Sbjct: 17370 agatgcagatctttgtgaagacactcactggcaagaccatcaccctcgaggttgagtcct 17311 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 |||| || || ||||| || ||||| ||||| ||||||||||||||||| || || |||| Sbjct: 17310 ctgatacaattgacaatgtgaaggccaagattcaggacaaggagggcattccacctgacc 17251 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 |||| || |||||||||||||||||||| || ||||| ||||||||||| || || |||| Sbjct: 17250 agcaacgtctcatctttgctggcaagcaactagaggatggccgcaccctcgcggattaca 17191 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||||||||||||||| || || ||||||||||| || |||||||||| Sbjct: 17190 acatccagaaggagtccaccctccaccttgtccttcgcctcaggggaggcatgcagatct 17131 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | ||||||||| | || || ||||||||||| || | || ||||| ||||||| |||| Sbjct: 17130 ttgtgaagaccttgacaggaaagaccatcactcttgcggtcgagtcctcggacaagatcg 17071 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 |||| || ||||||||||| |||||||||||||| ||||||||||||||||||| ||||| Sbjct: 17070 acaatgtgaaggcgaagattcaggacaaggagggaattcccccggaccagcagc-gcctc 17012 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| | | ||||||||| || ||||| || || || |||| |||||||| ||||| Sbjct: 17011 atctttg-cagacaagcagctcgaggatggacgtacactggctgattacaacattcagaa 16953 Query: 659 gg 660 || Sbjct: 16952 gg 16951 Score = 228 bits (115), Expect = 2e-56 Identities = 193/219 (88%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||| | || || ||||||||||| |||| ||| |||||||| Sbjct: 17140 atgcagatctttgtgaagaccttgacaggaaagaccatcactcttgcggtcgagtcctcg 17081 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||| ||||||||| || ||||||||||| |||||||||||||| || |||||||||||| Sbjct: 17080 gacaagatcgacaatgtgaaggcgaagattcaggacaaggagggaattcccccggaccag 17021 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||||||||||||||| | ||||||||| ||||| || || || || ||||| |||||| Sbjct: 17020 cagcgcctcatctttgcagacaagcagctcgaggatggacgtacactggctgattacaac 16961 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctc 459 || ||||||||||||||| | |||||||||||||||||| Sbjct: 16960 attcagaaggagtccaccttgcacctggtgctccgcctc 16922
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 375 bits (189), Expect = e-100 Identities = 365/422 (86%), Gaps = 2/422 (0%) Strand = Plus / Minus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| Sbjct: 145234 agatgcagatctttgtgaagacactcactggcaagaccatcaccctcgaggttgagtcct 145175 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 |||| || || ||||| || ||||| ||||| ||||||||||||||||| || || |||| Sbjct: 145174 ctgatacaattgacaatgtgaaggccaagattcaggacaaggagggcattccacctgacc 145115 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 |||| || |||||||||||||||||||| || ||||| ||||||||||| || || |||| Sbjct: 145114 agcaacgtctcatctttgctggcaagcaactagaggatggccgcaccctcgcggattaca 145055 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||||||||||||||| || || ||||||||||| || |||||||||| Sbjct: 145054 acatccagaaggagtccaccctccaccttgtccttcgcctcaggggaggcatgcagatct 144995 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | ||||||||| | || || ||||||||||| || | || ||||| ||||||| |||| Sbjct: 144994 ttgtgaagaccttgacaggaaagaccatcactcttgcggtcgagtcctcggacaagatcg 144935 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 |||| || ||||||||||| |||||||||||||| ||||||||||||||||||| ||||| Sbjct: 144934 acaatgtgaaggcgaagattcaggacaaggagggaattcccccggaccagcagc-gcctc 144876 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| | | ||||||||| || ||||| || || || |||| |||||||| ||||| Sbjct: 144875 atctttg-cagacaagcagctcgaggatggacgtacactggctgattacaacattcagaa 144817 Query: 659 gg 660 || Sbjct: 144816 gg 144815 Score = 228 bits (115), Expect = 2e-56 Identities = 193/219 (88%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||| | || || ||||||||||| |||| ||| |||||||| Sbjct: 145004 atgcagatctttgtgaagaccttgacaggaaagaccatcactcttgcggtcgagtcctcg 144945 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||| ||||||||| || ||||||||||| |||||||||||||| || |||||||||||| Sbjct: 144944 gacaagatcgacaatgtgaaggcgaagattcaggacaaggagggaattcccccggaccag 144885 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||||||||||||||| | ||||||||| ||||| || || || || ||||| |||||| Sbjct: 144884 cagcgcctcatctttgcagacaagcagctcgaggatggacgtacactggctgattacaac 144825 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctc 459 || ||||||||||||||| | |||||||||||||||||| Sbjct: 144824 attcagaaggagtccaccttgcacctggtgctccgcctc 144786
>gb|BC089218.1| Rattus norvegicus ubiquitin C, mRNA (cDNA clone IMAGE:7312282), partial cds Length = 2083 Score = 375 bits (189), Expect = e-100 Identities = 377/438 (86%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1136 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1195 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1196 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1255 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| ||||||||||| Sbjct: 1256 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtctgactacaac 1315 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 1316 atccagaaggagtccaccctgcacctggtcctgcgcctcagagggggcatgcagatcttt 1375 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1376 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 1435 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1436 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1494 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 1495 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 1553 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 1554 agtccaccctgcacctgg 1571 Score = 375 bits (189), Expect = e-100 Identities = 377/438 (86%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 452 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 511 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 512 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 571 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 572 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 631 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 632 atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt 691 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 692 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 751 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 752 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 810 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| ||||||||||||||||| Sbjct: 811 ctttg-caggcaagcagctggaagatggccgcaccctgtctgactacaacatccagaagg 869 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 870 agtccaccctgcacctgg 887 Score = 371 bits (187), Expect = 3e-99 Identities = 363/420 (86%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 680 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 739 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 740 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 799 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| ||||||||||| Sbjct: 800 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtctgactacaac 859 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 860 atccagaaggagtccaccctgcacctggtcctgcgcctcagagggggcatgcagatcttt 919 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 920 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 979 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 980 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1038 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 1039 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 1097 Score = 367 bits (185), Expect = 4e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1364 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1423 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1424 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1483 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1484 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1543 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 1544 atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt 1603 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1604 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 1663 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1664 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1722 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 1723 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 1781 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 1782 agtccaccctgcacctgg 1799 Score = 367 bits (185), Expect = 4e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 908 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 967 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 968 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1027 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1028 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1087 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||| | |||||||| || |||||||| || || ||||||||||| Sbjct: 1088 atccagaaggagtccaccttgcacctggtccttcgcctcagagggggcatgcagatcttt 1147 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1148 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 1207 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1208 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1266 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| ||||||||||||||||| Sbjct: 1267 ctttg-caggcaagcagctggaagatggccgcaccctgtctgactacaacatccagaagg 1325 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 1326 agtccaccctgcacctgg 1343 Score = 359 bits (181), Expect = 1e-95 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 224 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 283 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 284 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 343 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | || |||||| Sbjct: 344 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagattacaac 403 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 404 atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt 463 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 464 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 523 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 524 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 582 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 583 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 641 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 642 agtccaccctgcacctgg 659 Score = 341 bits (172), Expect = 2e-90 Identities = 369/433 (85%), Gaps = 2/433 (0%) Strand = Plus / Plus Query: 246 gatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctctgacac 305 |||||||||||||||||| || ||||||||||||||||| ||||| ||| || |||||| Sbjct: 1 gatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacac 60 Query: 306 gatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccagcagcg 365 || || || |||||||| ||||||||||||||||||||||||||||| ||||||||| | Sbjct: 61 cattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagag 120 Query: 366 cctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaacatcca 425 || |||||||| ||||||||||| || || ||||||||||| | |||||||||||||| Sbjct: 121 gctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaacatcca 180 Query: 426 gaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttcgtgaa 485 ||||||||||||| | |||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 181 gaaggagtccaccttgcacctggtccttcgcctcagagggggcatgcagatctttgtgaa 240 Query: 486 gaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgacaacgt 545 |||||| || |||||||||||||||||||||| ||| | |||||||| || || || Sbjct: 241 gaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaaaatgt 300 Query: 546 caaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcatntttg 605 |||||| ||||||||||||||||||||||| ||||| ||||||||| || || || |||| Sbjct: 301 caaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgatctttg 359 Query: 606 ncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaaggggtca 665 | ||||||||||| || |||||||| ||||| | | |||||||||||||||| ||| Sbjct: 360 -caggcaagcagctggaagatggccgcaccctgtcagattacaacatccagaaggagtcc 418 Query: 666 cccctgcccctgg 678 |||||| ||||| Sbjct: 419 accctgcacctgg 431 Score = 283 bits (143), Expect = 5e-73 Identities = 242/275 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1592 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1651 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1652 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1711 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1712 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1771 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 1772 atccagaaggagtccaccctgcacctggtcctgcgcctcagagggggcatgcagatcttt 1831 Query: 481 gtgaagaccctcaccggcaagaccatcaccctgga 515 ||||||||||| || |||||||||||||| ||||| Sbjct: 1832 gtgaagaccctgacaggcaagaccatcactctgga 1866
>ref|XR_004579.1| PREDICTED: Mus musculus gene model 1821, (NCBI) (Gm1821), misc RNA Length = 977 Score = 369 bits (186), Expect = 1e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 106 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 165 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 166 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 225 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 226 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 285 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| ||||| || |||||||| |||||||||||| Sbjct: 286 atccagaaggagtcaaccctgcacctggtcctccgtctgaggggtggcatgcagatcttc 345 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 346 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 405 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 406 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 464 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||| | Sbjct: 465 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaag 523 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 524 agtcaaccctgcacctgg 541 Score = 321 bits (162), Expect = 2e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 334 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 393 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 394 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 453 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 454 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 513 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| | |||||||| | |||||||||| Sbjct: 514 atccagaaagagtcaaccctgcacctggtcctccgtatgaggggtggcaagcagatcttc 573 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 574 gtgaagaccctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 633 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 634 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 692 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || || ||| |||||||||||||| Sbjct: 693 ctttgcc-ggcaagcagctagaagatggccgcactctctctgattacaacatccagaa 749 Score = 184 bits (93), Expect = 3e-43 Identities = 183/213 (85%) Strand = Plus / Plus Query: 243 gcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctctga 302 ||||||||| ||||||||||| || ||||||||||||||||| ||||| ||| || ||| Sbjct: 564 gcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagtga 623 Query: 303 cacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccagca 362 ||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||||| Sbjct: 624 caccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccagca 683 Query: 363 gcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaacat 422 | | || |||||||| ||||||||||| || || |||||||| || |||| |||||||| Sbjct: 684 gaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaacat 743 Query: 423 ccagaaggagtccaccctccacctggtgctccg 455 |||||| ||||| ||||| |||||||| ||||| Sbjct: 744 ccagaaagagtcgaccctgcacctggtcctccg 776
>gb|BC114001.1| Bos taurus polyubiquitin, mRNA (cDNA clone MGC:133799 IMAGE:8064312), complete cds Length = 1093 Score = 369 bits (186), Expect = 1e-98 Identities = 361/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 476 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 535 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 536 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 595 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 596 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 655 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || ||||||||||||||||||||| Sbjct: 656 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtggtatgcagatcttc 715 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 716 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgag 775 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||| ||||||||||| ||||||||| || ||||| Sbjct: 776 aacgtgaaggccaagatccaggataaggaaggcattccccctgaccagcagagg-ctcat 834 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| |||||||||||||| Sbjct: 835 ctttgcc-ggcaagcagctggaagatggccgcactctttctgattacaacatccagaa 891 Score = 361 bits (182), Expect = 2e-96 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| || ||||||||||| ||||||||||||||||| || || || ||| || | Sbjct: 248 atgcagattttcgtgaagaccctgaccggcaagaccatcacactggaagtggagcccagt 307 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| ||||||||||| ||||| |||||| Sbjct: 308 gacaccatcgagaacgtgaaggccaagatccaggataaggagggcattccccccgaccag 367 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 368 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 427 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || ||||||||||||||||||||| Sbjct: 428 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtggtatgcagatcttc 487 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 488 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 547 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||| ||||||||||| ||||||||| || ||||| Sbjct: 548 aacgtgaaggccaagatccaggataaggaaggcattccccctgaccagcagagg-ctcat 606 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| |||||||||||||| Sbjct: 607 ctttgcc-ggcaagcagctggaagatggccgcactctttctgattacaacatccagaa 663 Score = 353 bits (178), Expect = 6e-94 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 20 atgcagatcttcgtgaaaaccctgaccggcaagaccatcaccctggaggtggagcccagt 79 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 80 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 139 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 140 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 199 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || ||||||||||||||||| ||| Sbjct: 200 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtggtatgcagattttc 259 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||| | ||| | ||||||||||| Sbjct: 260 gtgaagaccctgaccggcaagaccatcacactggaagtggagcccagtgacaccatcgag 319 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||||||||||||||| ||||||||| || ||||| Sbjct: 320 aacgtgaaggccaagatccaggataaggagggcattccccccgaccagcagagg-ctcat 378 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| |||||||||||||| Sbjct: 379 ctttgcc-ggcaagcagctggaagatggccgcactctttctgattacaacatccagaa 435 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 704 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 763 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 764 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 823 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 824 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 883 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || || || |||||||| Sbjct: 884 atccagaaagagtcgaccctgcacctggtccttcgtctgaggggtgg 930
>dbj|AK003190.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1100001L13 product:ubiquitin B, full insert sequence Length = 932 Score = 369 bits (186), Expect = 1e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 100 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 159 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 160 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 219 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 220 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 279 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 280 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 339 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 340 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 399 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 400 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 458 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 459 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaagg 517 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 518 agtcaaccctgcacctgg 535 Score = 329 bits (166), Expect = 9e-87 Identities = 356/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 328 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 387 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 388 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 447 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 448 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 507 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 508 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 567 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||| |||||| ||| | ||||||||||| Sbjct: 568 gtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagtgacaccatcgag 627 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 628 aatgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 686 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || || ||| |||||||||||||| Sbjct: 687 ctttgcc-ggcaagcagctagaagatggccgcactctctctgattacaacatccagaa 743 Score = 188 bits (95), Expect = 2e-44 Identities = 194/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||| | ||||| ||| || | Sbjct: 556 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 615 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 616 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 675 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || |||||||| || |||| |||||| Sbjct: 676 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 735 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| ||||| || |||||||| Sbjct: 736 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtgg 782
>ref|NM_174133.2| Bos taurus polyubiquitin (LOC281370), mRNA Length = 1144 Score = 369 bits (186), Expect = 1e-98 Identities = 361/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 543 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 602 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 603 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 662 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 663 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 722 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || ||||||||||||||||||||| Sbjct: 723 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtggtatgcagatcttc 782 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 783 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgag 842 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||| ||||||||||| ||||||||| || ||||| Sbjct: 843 aacgtgaaggccaagatccaggataaggaaggcattccccctgaccagcagagg-ctcat 901 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| |||||||||||||| Sbjct: 902 ctttgcc-ggcaagcagctggaagatggccgcactctttctgattacaacatccagaa 958 Score = 361 bits (182), Expect = 2e-96 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| || ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 315 atgcagattttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 374 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| ||||||||||| ||||| |||||| Sbjct: 375 gacaccatcgagaacgtgaaggccaagatccaggataaggagggcattccccccgaccag 434 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||| |||||| Sbjct: 435 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttttgattacaac 494 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || ||||||||||||||||||||| Sbjct: 495 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtggtatgcagatcttc 554 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 555 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 614 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||| ||||||||||| ||||||||| || ||||| Sbjct: 615 aacgtgaaggccaagatccaggataaggaaggcattccccctgaccagcagagg-ctcat 673 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| |||||||||||||| Sbjct: 674 ctttgcc-ggcaagcagctggaagatggccgcactctttctgattacaacatccagaa 730 Score = 353 bits (178), Expect = 6e-94 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 87 atgcagatcttcgtgaaaaccctgaccggcaagaccatcaccctggaggtggagcccagt 146 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 147 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 206 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 207 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 266 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || ||||||||||||||||| ||| Sbjct: 267 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtggtatgcagattttc 326 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 327 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgag 386 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||||||||||||||| ||||||||| || ||||| Sbjct: 387 aacgtgaaggccaagatccaggataaggagggcattccccccgaccagcagagg-ctcat 445 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| || |||||||||||||| Sbjct: 446 ctttgcc-ggcaagcagctggaagatggccgcactctttttgattacaacatccagaa 502 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 771 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 830 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 831 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 890 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 891 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 950 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || || || |||||||| Sbjct: 951 atccagaaagagtcgaccctgcacctggtccttcgtctgaggggtgg 997
>dbj|AB099044.1| Bos taurus mRNA for similar to polyubiquitin, partial cds, clone: ORCS12767 Length = 534 Score = 369 bits (186), Expect = 1e-98 Identities = 361/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 24 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 83 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 84 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 143 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 144 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 203 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || ||||||||||||||||||||| Sbjct: 204 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtggtatgcagatcttc 263 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 264 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgag 323 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||| ||||||||||| ||||||||| || ||||| Sbjct: 324 aacgtgaaggccaagatccaggataaggaaggcattccccctgaccagcagagg-ctcat 382 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| |||||||||||||| Sbjct: 383 ctttgcc-ggcaagcagctggaagatggccgcactctttctgattacaacatccagaa 439 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 252 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 311 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 312 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 371 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 372 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 431 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || || || |||||||| Sbjct: 432 atccagaaagagtcgaccctgcacctggtccttcgtctgaggggtgg 478 Score = 180 bits (91), Expect = 5e-42 Identities = 173/199 (86%), Gaps = 2/199 (1%) Strand = Plus / Plus Query: 460 aggggtggtatgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggt 519 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 15 aggggtggtatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtg 74 Query: 520 gagtcttcggacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattccc 579 ||| | ||||||||||| ||||| ||||| ||||||||||| ||||| ||||||||| Sbjct: 75 gagcccagtgacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccc 134 Query: 580 ccggaccagcagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttg 639 || ||||||||| || ||||| |||| | ||||||||||| || |||||||| || ||| Sbjct: 135 cctgaccagcagagg-ctcatctttgcc-ggcaagcagctggaagatggccgcactcttt 192 Query: 640 ctgnctacaacatccagaa 658 ||| |||||||||||||| Sbjct: 193 ctgattacaacatccagaa 211
>emb|Z18245.1|BTPOLYUB Bos taurus gene for polyubiquitin Length = 1144 Score = 369 bits (186), Expect = 1e-98 Identities = 361/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 543 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 602 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 603 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 662 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 663 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 722 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || ||||||||||||||||||||| Sbjct: 723 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtggtatgcagatcttc 782 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 783 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgag 842 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||| ||||||||||| ||||||||| || ||||| Sbjct: 843 aacgtgaaggccaagatccaggataaggaaggcattccccctgaccagcagagg-ctcat 901 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| |||||||||||||| Sbjct: 902 ctttgcc-ggcaagcagctggaagatggccgcactctttctgattacaacatccagaa 958 Score = 361 bits (182), Expect = 2e-96 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| || ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 315 atgcagattttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 374 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| ||||||||||| ||||| |||||| Sbjct: 375 gacaccatcgagaacgtgaaggccaagatccaggataaggagggcattccccccgaccag 434 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||| |||||| Sbjct: 435 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttttgattacaac 494 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || ||||||||||||||||||||| Sbjct: 495 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtggtatgcagatcttc 554 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 555 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 614 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||| ||||||||||| ||||||||| || ||||| Sbjct: 615 aacgtgaaggccaagatccaggataaggaaggcattccccctgaccagcagagg-ctcat 673 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| |||||||||||||| Sbjct: 674 ctttgcc-ggcaagcagctggaagatggccgcactctttctgattacaacatccagaa 730 Score = 353 bits (178), Expect = 6e-94 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 87 atgcagatcttcgtgaaaaccctgaccggcaagaccatcaccctggaggtggagcccagt 146 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 147 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 206 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 207 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 266 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || ||||||||||||||||| ||| Sbjct: 267 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtggtatgcagattttc 326 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 327 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgag 386 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||||||||||||||| ||||||||| || ||||| Sbjct: 387 aacgtgaaggccaagatccaggataaggagggcattccccccgaccagcagagg-ctcat 445 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| || |||||||||||||| Sbjct: 446 ctttgcc-ggcaagcagctggaagatggccgcactctttttgattacaacatccagaa 502 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 771 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 830 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 831 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 890 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 891 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 950 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || || || |||||||| Sbjct: 951 atccagaaagagtcgaccctgcacctggtccttcgtctgaggggtgg 997
>gb|AC163692.4| Mus musculus BAC clone RP24-68H1 from chromosome 14, complete sequence Length = 224333 Score = 369 bits (186), Expect = 1e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 146099 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 146040 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 146039 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 145980 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 145979 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 145920 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| ||||| || |||||||| |||||||||||| Sbjct: 145919 atccagaaggagtcaaccctgcacctggtcctccgtctgaggggtggcatgcagatcttc 145860 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 145859 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 145800 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 145799 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 145741 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||| | Sbjct: 145740 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaag 145682 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 145681 agtcaaccctgcacctgg 145664 Score = 337 bits (170), Expect = 4e-89 Identities = 357/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 145871 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 145812 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 145811 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 145752 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 145751 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 145692 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || |||||||| |||||||||||| Sbjct: 145691 atccagaaagagtcaaccctgcacctggtcctccgtctgaggggtggcatgcagatcttc 145632 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 145631 gtgaagaccctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 145572 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 145571 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 145513 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || || ||| |||||||||||||| Sbjct: 145512 ctttgcc-ggcaagcagctagaagatggccgcactctctctgattacaacatccagaa 145456 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 145643 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 145584 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 145583 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 145524 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || |||||||| || |||| |||||| Sbjct: 145523 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 145464 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| ||||| || |||||||| Sbjct: 145463 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtgg 145417
>gb|M62429.1|BOVPOUBA Bovine polyubiquitin mRNA, 3' end, clone rpub2 Length = 636 Score = 369 bits (186), Expect = 1e-98 Identities = 361/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 35 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 94 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 95 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 154 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 155 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 214 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || ||||||||||||||||||||| Sbjct: 215 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtggtatgcagatcttc 274 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 275 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgag 334 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||| ||||||||||| ||||||||| || ||||| Sbjct: 335 aacgtgaaggccaagatccaggataaggaaggcattccccctgaccagcagagg-ctcat 393 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| |||||||||||||| Sbjct: 394 ctttgcc-ggcaagcagctggaagatggccgcactctttctgattacaacatccagaa 450 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 263 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 322 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 323 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 382 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 383 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 442 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || || || |||||||| Sbjct: 443 atccagaaagagtcgaccctgcacctggtccttcgtctgaggggtgg 489 Score = 196 bits (99), Expect = 8e-47 Identities = 193/223 (86%), Gaps = 2/223 (0%) Strand = Plus / Plus Query: 436 accctccacctggtgctccgcctcaggggtggtatgcagatcttcgtgaagaccctcacc 495 ||||| |||||||| ||||| || |||||||||||||||||||||||||||||||| ||| Sbjct: 2 accctgcacctggtcctccgtctgaggggtggtatgcagatcttcgtgaagaccctgacc 61 Query: 496 ggcaagaccatcaccctggagggtgagtcttcggacaccatcgacaacgtcaaggcgaag 555 |||||||||||||||||||||| ||| | ||||||||||| ||||| ||||| ||| Sbjct: 62 ggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaaggccaag 121 Query: 556 atccaggacaaggagggcattcccccggaccagcagcggcctcatntttgncgggcaagc 615 |||||||| ||||| ||||||||||| ||||||||| || ||||| |||| | ||||||| Sbjct: 122 atccaggataaggaaggcattccccctgaccagcagagg-ctcatctttgcc-ggcaagc 179 Query: 616 agcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| || |||||||| || ||| ||| |||||||||||||| Sbjct: 180 agctggaagatggccgcactctttctgattacaacatccagaa 222
>ref|NM_017314.1| Rattus norvegicus ubiquitin C (Ubc), mRNA Length = 2545 Score = 367 bits (185), Expect = 4e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1858 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1917 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1918 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1977 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1978 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2037 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 2038 atccagaaggagtccaccctgcacctggtcctgcgcctcagagggggcatgcagatcttt 2097 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 2098 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 2157 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 2158 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 2216 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 2217 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 2275 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 2276 agtccaccctgcacctgg 2293 Score = 367 bits (185), Expect = 4e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1630 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1689 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1690 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1749 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1750 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1809 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 1810 atccagaaggagtccaccctgcacctggtcctgcgcctcagagggggcatgcagatcttt 1869 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1870 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 1929 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1930 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1988 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 1989 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 2047 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 2048 agtccaccctgcacctgg 2065 Score = 367 bits (185), Expect = 4e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1402 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1461 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1462 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1521 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1522 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1581 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 1582 atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt 1641 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1642 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 1701 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1702 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1760 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 1761 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 1819 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 1820 agtccaccctgcacctgg 1837 Score = 367 bits (185), Expect = 4e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1174 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1233 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1234 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1293 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1294 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1353 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 1354 atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt 1413 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1414 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 1473 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1474 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1532 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 1533 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 1591 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 1592 agtccaccctgcacctgg 1609 Score = 367 bits (185), Expect = 4e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 946 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1005 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1006 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1065 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1066 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1125 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 1126 atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt 1185 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1186 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 1245 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1246 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1304 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 1305 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 1363 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 1364 agtccaccctgcacctgg 1381 Score = 367 bits (185), Expect = 4e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 718 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 777 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 778 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 837 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 838 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 897 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 898 atccagaaggagtccaccctgcacctggtcctgcgcctcagagggggcatgcagatcttt 957 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 958 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 1017 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1018 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1076 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 1077 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 1135 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 1136 agtccaccctgcacctgg 1153 Score = 367 bits (185), Expect = 4e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 490 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 549 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 550 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 609 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 610 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 669 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 670 atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt 729 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 730 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 789 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 790 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 848 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 849 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 907 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 908 agtccaccctgcacctgg 925 Score = 359 bits (181), Expect = 1e-95 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 262 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 321 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 322 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 381 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 382 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 441 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||| | |||||||| || |||||||| || || ||||||||||| Sbjct: 442 atccagaaggagtccaccttgcacctggtccttcgcctcagagggggcatgcagatcttt 501 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 502 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 561 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 562 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 620 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 621 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 679 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 680 agtccaccctgcacctgg 697 Score = 339 bits (171), Expect = 9e-90 Identities = 359/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||| ||| | || || |||||||||||||| ||||| ||| || | Sbjct: 34 atgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccagt 93 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 94 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 153 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 154 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 213 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 214 atccagaaggagtccaccctgcacctggtcctgcgcctcagagggggcatgcagatcttt 273 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 274 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 333 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 334 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 392 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 393 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 451 Score = 287 bits (145), Expect = 3e-74 Identities = 244/277 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 2086 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 2145 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 2146 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 2205 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 2206 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2265 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 2266 atccagaaggagtccaccctgcacctggtcctgcgcctcagagggggcatgcagatcttt 2325 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagg 517 ||||||||||| || |||||||||||||| ||||||| Sbjct: 2326 gtgaagaccctgacaggcaagaccatcactctggagg 2362 Score = 121 bits (61), Expect = 4e-24 Identities = 174/210 (82%), Gaps = 2/210 (0%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||||||||| ||||| ||| | || || ||||||||||||||||||| ||| | Sbjct: 34 atgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccagt 93 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 |||||||| || || |||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 94 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 153 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||| || || || |||| | ||||||||||| || |||||||| ||||| | | ||||| Sbjct: 154 cagagg-ctgatctttg-caggcaagcagctggaagatggccgcaccctgtcagactaca 211 Query: 649 acatccagaaggggtcacccctgcccctgg 678 |||||||||||| ||| |||||| ||||| Sbjct: 212 acatccagaaggagtccaccctgcacctgg 241 Score = 67.9 bits (34), Expect = 5e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 290 ||||||||||||||||||||||| || |||||||||||||| || ||||| Sbjct: 2314 atgcagatctttgtgaagaccctgacaggcaagaccatcactctggaggt 2363
>dbj|D17296.1|RATPILP Rattus norvegicus mRNA for polyubiquitin, complete cds, ten completely repetitive ubiquitins in tandem and one ubiguitin-like protein Length = 2545 Score = 367 bits (185), Expect = 4e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1858 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1917 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1918 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1977 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1978 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2037 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 2038 atccagaaggagtccaccctgcacctggtcctgcgcctcagagggggcatgcagatcttt 2097 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 2098 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 2157 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 2158 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 2216 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 2217 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 2275 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 2276 agtccaccctgcacctgg 2293 Score = 367 bits (185), Expect = 4e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1630 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1689 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1690 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1749 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1750 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1809 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 1810 atccagaaggagtccaccctgcacctggtcctgcgcctcagagggggcatgcagatcttt 1869 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1870 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 1929 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1930 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1988 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 1989 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 2047 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 2048 agtccaccctgcacctgg 2065 Score = 367 bits (185), Expect = 4e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1402 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1461 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1462 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1521 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1522 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1581 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 1582 atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt 1641 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1642 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 1701 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1702 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1760 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 1761 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 1819 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 1820 agtccaccctgcacctgg 1837 Score = 367 bits (185), Expect = 4e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1174 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1233 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1234 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1293 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1294 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1353 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 1354 atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt 1413 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1414 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 1473 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1474 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1532 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 1533 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 1591 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 1592 agtccaccctgcacctgg 1609 Score = 367 bits (185), Expect = 4e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 946 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1005 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1006 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1065 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1066 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1125 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 1126 atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt 1185 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1186 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 1245 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1246 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1304 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 1305 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 1363 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 1364 agtccaccctgcacctgg 1381 Score = 367 bits (185), Expect = 4e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 718 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 777 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 778 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 837 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 838 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 897 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 898 atccagaaggagtccaccctgcacctggtcctgcgcctcagagggggcatgcagatcttt 957 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 958 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 1017 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1018 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1076 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 1077 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 1135 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 1136 agtccaccctgcacctgg 1153 Score = 367 bits (185), Expect = 4e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 490 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 549 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 550 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 609 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 610 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 669 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 670 atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt 729 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 730 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 789 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 790 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 848 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 849 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 907 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 908 agtccaccctgcacctgg 925 Score = 359 bits (181), Expect = 1e-95 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 262 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 321 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 322 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 381 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 382 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 441 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||| | |||||||| || |||||||| || || ||||||||||| Sbjct: 442 atccagaaggagtccaccttgcacctggtccttcgcctcagagggggcatgcagatcttt 501 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 502 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 561 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 562 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 620 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 621 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 679 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 680 agtccaccctgcacctgg 697 Score = 339 bits (171), Expect = 9e-90 Identities = 359/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||| ||| | || || |||||||||||||| ||||| ||| || | Sbjct: 34 atgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccagt 93 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 94 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 153 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 154 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 213 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 214 atccagaaggagtccaccctgcacctggtcctgcgcctcagagggggcatgcagatcttt 273 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 274 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 333 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 334 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 392 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 393 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 451 Score = 287 bits (145), Expect = 3e-74 Identities = 244/277 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 2086 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 2145 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 2146 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 2205 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 2206 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2265 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 2266 atccagaaggagtccaccctgcacctggtcctgcgcctcagagggggcatgcagatcttt 2325 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagg 517 ||||||||||| || |||||||||||||| ||||||| Sbjct: 2326 gtgaagaccctgacaggcaagaccatcactctggagg 2362 Score = 121 bits (61), Expect = 4e-24 Identities = 174/210 (82%), Gaps = 2/210 (0%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||||||||| ||||| ||| | || || ||||||||||||||||||| ||| | Sbjct: 34 atgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccagt 93 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 |||||||| || || |||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 94 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 153 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||| || || || |||| | ||||||||||| || |||||||| ||||| | | ||||| Sbjct: 154 cagagg-ctgatctttg-caggcaagcagctggaagatggccgcaccctgtcagactaca 211 Query: 649 acatccagaaggggtcacccctgcccctgg 678 |||||||||||| ||| |||||| ||||| Sbjct: 212 acatccagaaggagtccaccctgcacctgg 241 Score = 67.9 bits (34), Expect = 5e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 290 ||||||||||||||||||||||| || |||||||||||||| || ||||| Sbjct: 2314 atgcagatctttgtgaagaccctgacaggcaagaccatcactctggaggt 2363
>gb|BC103477.1| Rattus norvegicus ubiquitin C, mRNA (cDNA clone MGC:124622 IMAGE:7929586), complete cds Length = 1501 Score = 367 bits (185), Expect = 4e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 743 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 802 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 803 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 862 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 863 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 922 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 923 atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt 982 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 983 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 1042 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1043 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1101 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 1102 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 1160 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 1161 agtccaccctgcacctgg 1178 Score = 367 bits (185), Expect = 4e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 515 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 574 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 575 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 634 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 635 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 694 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 695 atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt 754 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 755 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 814 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 815 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 873 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 874 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 932 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 933 agtccaccctgcacctgg 950 Score = 367 bits (185), Expect = 4e-98 Identities = 376/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 287 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 346 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 347 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 406 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 407 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 466 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 467 atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt 526 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 527 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 586 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 587 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 645 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 646 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 704 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 705 agtccaccctgcacctgg 722 Score = 335 bits (169), Expect = 1e-88 Identities = 372/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||| ||| | || || |||||||||||||| ||||| ||| || | Sbjct: 59 atgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccagt 118 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 119 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 178 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 179 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 238 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||| | |||||||| || |||||||| || || ||||||||||| Sbjct: 239 atccagaaggagtccaccttgcacctggtccttcgcctcagagggggcatgcagatcttt 298 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 299 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgaa 358 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 359 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 417 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 418 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaagg 476 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 477 agtccaccctgcacctgg 494 Score = 283 bits (143), Expect = 5e-73 Identities = 242/275 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 971 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1030 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1031 gacaccattgaaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1090 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1091 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1150 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct: 1151 atccagaaggagtccaccctgcacctggtccttcgcctcagagggggcatgcagatcttt 1210 Query: 481 gtgaagaccctcaccggcaagaccatcaccctgga 515 ||||||||||| || |||||||||||||| ||||| Sbjct: 1211 gtgaagaccctgacaggcaagaccatcactctgga 1245
>emb|AJ437537.2|OSA437537 Oryza sativa partial mRNA for polyubiquitin-like protein (ub1 gene) Length = 660 Score = 365 bits (184), Expect = 2e-97 Identities = 353/408 (86%), Gaps = 2/408 (0%) Strand = Plus / Plus Query: 253 gtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctctgacacgatcgac 312 |||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 242 gtgaagaccctcaccggcaagaccattaccctggaggtcgagtcctccgacacgatcgat 301 Query: 313 aacgtcaaggcgaagatccaggacaaggagggcatccccccggaccagcagcgcctcatc 372 || || ||||| |||||||||||||||||||| ||||| || ||||||||||| |||||| Sbjct: 302 aatgtgaaggccaagatccaggacaaggagggaatcccaccagaccagcagcgtctcatc 361 Query: 373 tttgctggcaagcagcttgaggacggccgcacccttgctgactacaacatccagaaggag 432 |||||||| |||||||| ||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 362 tttgctgggaagcagctcgaggatggccgcacccttgcagactacaacatccaaaaggaa 421 Query: 433 tccaccctccacctggtgctccgcctcaggggtggtatgcagatcttcgtgaagaccctc 492 |||||||| ||||| || || |||||| |||| |||||||||||||| ||||||||||| Sbjct: 422 tccaccctgcaccttgtcctgcgcctccggggcggtatgcagatctttgtgaagaccctt 481 Query: 493 accggcaagaccatcaccctggagggtgagtcttcggacaccatcgacaacgtcaaggcg 552 || |||||||| |||||| |||||| |||||| || ||||| |||||||| || ||||| Sbjct: 482 actggcaagacgatcaccttggaggttgagtcctctgacacgatcgacaatgtgaaggcc 541 Query: 553 aagatccaggacaaggagggcattcccccggaccagcagcggcctcatntttgncgggca 612 |||||||||||||||||||| ||| | || |||||||| |||| || || | | |||| Sbjct: 542 aagatccaggacaaggagggtatt-caccagaccagcaagcgcctnatcttcg-ctggca 599 Query: 613 agcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||||||||| ||||| || |||||||| | |||||||| ||||||| Sbjct: 600 agcagcttgaggatggtcgcacccttgcagattacaacattcagaagg 647 Score = 329 bits (166), Expect = 9e-87 Identities = 356/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 243 gcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctctga 302 |||||| || || ||||||||||| ||||||||||||||| | |||||||||||||| || Sbjct: 4 gcagatattcgttaagaccctcactggcaagaccatcaccttggaggttgagtcctccga 63 Query: 303 cacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccagca 362 ||||| ||||| || ||||| ||||| |||||||||||||||||||| ||||||||||| Sbjct: 64 tacgattgacaatgtgaaggctaagattcaggacaaggagggcatccctccggaccagca 123 Query: 363 gcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaacat 422 ||||| ||||| |||||||||||||||||||| || || || || || || || ||||| Sbjct: 124 acgccttatcttcgctggcaagcagcttgaggatgggcgtactctcgcggattataacat 183 Query: 423 ccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttcgt 482 |||||||||||||||| | ||||| || |||||||| | || || ||||| || ||||| Sbjct: 184 ccagaaggagtccaccttgcaccttgtcctccgccttcgtggaggcatgcaaatattcgt 243 Query: 483 gaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgacaa 542 |||||||||||||||||||||||| |||||||||| ||||| || ||||| ||||| || Sbjct: 244 gaagaccctcaccggcaagaccattaccctggaggtcgagtcctccgacacgatcgataa 303 Query: 543 cgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcatnt 602 || ||||| |||||||||||||||||||| || || || |||||||||| | ||||| | Sbjct: 304 tgtgaaggccaagatccaggacaaggagggaatcccaccagaccagcagc-gtctcatct 362 Query: 603 ttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 ||| ||| |||||||| || |||||||| |||||||| | |||||||||||| |||| Sbjct: 363 ttgctggg-aagcagctcgaggatggccgcacccttgcagactacaacatccaaaagg 419 Score = 218 bits (110), Expect = 2e-53 Identities = 180/201 (89%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || |||||||| |||||| | ||||||||||||||| Sbjct: 458 atgcagatctttgtgaagacccttactggcaagacgatcaccttggaggttgagtcctct 517 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||||||||| || ||||| |||||||||||||||||||| || | || |||||| Sbjct: 518 gacacgatcgacaatgtgaaggccaagatccaggacaaggagggtat-tcaccagaccag 576 Query: 361 c-agcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 | ||||||| ||||| |||||||||||||||||||| || ||||||||||| || ||||| Sbjct: 577 caagcgcctnatcttcgctggcaagcagcttgaggatggtcgcacccttgcagattacaa 636 Query: 420 catccagaaggagtccaccct 440 ||| ||||||||||||||||| Sbjct: 637 cattcagaaggagtccaccct 657
>ref|XM_753127.1| Ustilago maydis 521 hypothetical protein (UM02073.1) partial mRNA Length = 1164 Score = 363 bits (183), Expect = 6e-97 Identities = 362/420 (86%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||| || ||||||||||| |||||||||||||| ||||| || Sbjct: 1 atgcagatctttgtcaagactctgaccggcaagacgatcacccttgaggtggagtcttcc 60 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| |||||||| |||||||||||||||||||| |||||||| |||||| Sbjct: 61 gacacaatcgacaatgtcaaggccaagatccaggacaaggagggtatcccccctgaccag 120 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||||||||| ||||||||||| |||||||| || || | ||||||||| Sbjct: 121 cagcgtctcatctttgctggtaagcagcttgaagacggccgaacgctctcggactacaac 180 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| || || ||||| ||| | || || | ||||||||||||||||| Sbjct: 181 atccagaaggagtcgacacttcaccttgtgttgcgacttcgcggtggtatgcagatcttt 240 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| || ||||||||||| |||||||| |||| |||||||| ||||| |||||| Sbjct: 241 gtcaagactctgaccggcaagacgatcacccttgaggtggagtcttccgacacaatcgac 300 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| |||||||||||||||||||| || ||||| |||||||||| | ||||| Sbjct: 301 aatgtcaaggccaagatccaggacaaggagggtatcccccctgaccagcagc-gtctcat 359 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | || ||||||||||| || |||||||| || | | ||||||||||||||||| Sbjct: 360 ctttg-ctggtaagcagcttgaagacggccgaacgctctcggactacaacatccagaagg 418 Score = 355 bits (179), Expect = 1e-94 Identities = 361/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||| || ||||||||||| |||||||||||||| ||||| || Sbjct: 703 atgcagatctttgtcaagactctgaccggcaagacgatcacccttgaggtggagtcttcc 762 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| |||||||| |||||||||||||||||||| |||||||| |||||| Sbjct: 763 gacacaatcgacaatgtcaaggccaagatccaggacaaggagggtatcccccctgaccag 822 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||||||||| ||||||||||| |||||||| || || | ||||||||| Sbjct: 823 cagcgtctcatctttgctggtaagcagcttgaagacggccgaacgctctcggactacaac 882 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| || || ||||| ||| | || || | ||||||||||||||||| Sbjct: 883 atccagaaggagtcgacacttcaccttgtgttgcgacttcgtggtggtatgcagatcttt 942 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| || ||||||||||| |||||||| |||| |||||||| ||||| |||||| Sbjct: 943 gtcaagactctgaccggcaagacgatcacccttgaggtggagtcttccgacacaatcgac 1002 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||||||||||||||| || ||||| |||||||||| | ||||| Sbjct: 1003 aacgtcaaggccaagatccaggacaaggagggtatcccccctgaccagcagc-gtctcat 1061 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | || ||||||||||| || ||||| || || | | ||||||||||||||||| Sbjct: 1062 cttcg-ctggtaagcagcttgaagacggccgcacgctctcggactacaacatccagaagg 1120 Score = 347 bits (175), Expect = 4e-92 Identities = 360/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||| || ||||||||||| |||||||||||||| ||||| || Sbjct: 229 atgcagatctttgtcaagactctgaccggcaagacgatcacccttgaggtggagtcttcc 288 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| |||||||| |||||||||||||||||||| |||||||| |||||| Sbjct: 289 gacacaatcgacaatgtcaaggccaagatccaggacaaggagggtatcccccctgaccag 348 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||||||||| ||||||||||| |||||||| || || | ||||||||| Sbjct: 349 cagcgtctcatctttgctggtaagcagcttgaagacggccgaacgctctcggactacaac 408 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| || || ||||| ||| | || || | ||||||||||||||||| Sbjct: 409 atccagaaggagtcgacacttcaccttgtgttgcgacttcgtggtggtatgcagatcttt 468 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| || ||||||||||| |||||||| |||| |||||||| ||||| |||||| Sbjct: 469 gtcaagactctgaccggcaagacgatcacccttgaggtggagtcttccgacacaatcgac 528 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| |||||||||||||||||||| || ||||| |||||||||| | ||||| Sbjct: 529 aatgtcaaggccaagatccaggacaaggagggtatcccccctgaccagcagc-gtctcat 587 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | || ||||||||||| || ||||| || || | | ||||||||||||||||| Sbjct: 588 cttcg-ctggtaagcagcttgaagacggccgcacgctctcggactacaacatccagaagg 646 Score = 234 bits (118), Expect = 4e-58 Identities = 175/194 (90%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||| || ||||||||||| |||||||||||||| ||||| || Sbjct: 931 atgcagatctttgtcaagactctgaccggcaagacgatcacccttgaggtggagtcttcc 990 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| |||||||||||||||||||| |||||||| |||||| Sbjct: 991 gacacaatcgacaacgtcaaggccaagatccaggacaaggagggtatcccccctgaccag 1050 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| ||||| ||||||||||| ||||||||||| || | ||||||||| Sbjct: 1051 cagcgtctcatcttcgctggtaagcagcttgaagacggccgcacgctctcggactacaac 1110 Query: 421 atccagaaggagtc 434 |||||||||||||| Sbjct: 1111 atccagaaggagtc 1124 Score = 226 bits (114), Expect = 9e-56 Identities = 174/194 (89%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||| || ||||||||||| |||||||||||||| ||||| || Sbjct: 457 atgcagatctttgtcaagactctgaccggcaagacgatcacccttgaggtggagtcttcc 516 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| |||||||| |||||||||||||||||||| |||||||| |||||| Sbjct: 517 gacacaatcgacaatgtcaaggccaagatccaggacaaggagggtatcccccctgaccag 576 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| ||||| ||||||||||| ||||||||||| || | ||||||||| Sbjct: 577 cagcgtctcatcttcgctggtaagcagcttgaagacggccgcacgctctcggactacaac 636 Query: 421 atccagaaggagtc 434 |||||||||||||| Sbjct: 637 atccagaaggagtc 650 Score = 161 bits (81), Expect = 5e-36 Identities = 170/198 (85%), Gaps = 2/198 (1%) Strand = Plus / Plus Query: 463 ggtggtatgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgag 522 ||||||||||||||||| || ||||| || ||||||||||| |||||||| |||| ||| Sbjct: 697 ggtggtatgcagatctttgtcaagactctgaccggcaagacgatcacccttgaggtggag 756 Query: 523 tcttcggacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccg 582 ||||| ||||| |||||||| |||||||| |||||||||||||||||||| || ||||| Sbjct: 757 tcttccgacacaatcgacaatgtcaaggccaagatccaggacaaggagggtatcccccct 816 Query: 583 gaccagcagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctg 642 |||||||||| | ||||| |||| | || ||||||||||| || |||||||| || | | Sbjct: 817 gaccagcagc-gtctcatctttg-ctggtaagcagcttgaagacggccgaacgctctcgg 874 Query: 643 nctacaacatccagaagg 660 ||||||||||||||||| Sbjct: 875 actacaacatccagaagg 892
>gb|AY099138.1| Cercomonas edax isolate pub10 polyubiquitin gene, partial cds Length = 532 Score = 363 bits (183), Expect = 6e-97 Identities = 351/406 (86%), Gaps = 8/406 (1%) Strand = Plus / Plus Query: 261 cctcaccggcaagaccatcacccttgaggttgagtcctctgacacgatcgacaacgtcaa 320 |||||||||||||||||||||||| || || ||| ||||||||||||||| ||||| || Sbjct: 1 cctcaccggcaagaccatcaccctggacgtggagagctctgacacgatcgagaacgtgaa 60 Query: 321 ggcgaagatccaggacaaggagggcatccccccggaccagcagcgcctcatctttgctgg 380 | ||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 61 gcagaagatccaggacaaggagggcatccccccggatcagcagcgcctcatcttcgccgg 120 Query: 381 caagcagcttgaggacggccgcacccttgctgactacaacatccagaaggagtccaccct 440 ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 121 caagcagctcgaggacggccgcaccctggctgactacaacatccagaaggagtcgaccct 180 Query: 441 ccacctggtgctccgcctcagggg------tggtatgcagatcttcgtgaagaccctcac 494 ||||| ||||| || || | || ||| |||||||||||||| ||||||||||| Sbjct: 181 tcaccttgtgctgcgtctgcgcggtggctctggcatgcagatcttcgtcaagaccctcac 240 Query: 495 cggcaagaccatcaccctggagggtgagtcttcggacaccatcgacaacgtcaaggcgaa 554 ||||||||| ||||||||||| | ||| || ||||||||||| ||||| ||| ||| Sbjct: 241 cggcaagactatcaccctggacgtggagagctctgacaccatcgagaacgtgaagcagaa 300 Query: 555 gatccaggacaaggagggcattcccccggaccagcagcggcctcatntttgncgggcaag 614 ||||||||||||||||||||| |||||||| ||||||| ||||||| || | | |||||| Sbjct: 301 gatccaggacaaggagggcatccccccggatcagcagc-gcctcatcttcgcc-ggcaag 358 Query: 615 cagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 ||||| || || ||||| ||||| |||| ||||||||||||||||| Sbjct: 359 cagctcgaggacggccgcaccctggctgactacaacatccagaagg 404 Score = 289 bits (146), Expect = 7e-75 Identities = 247/281 (87%), Gaps = 6/281 (2%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||||||||||||||| |||||||| || || ||| |||| Sbjct: 215 atgcagatcttcgtcaagaccctcaccggcaagactatcaccctggacgtggagagctct 274 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 275 gacaccatcgagaacgtgaagcagaagatccaggacaaggagggcatccccccggatcag 334 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 335 cagcgcctcatcttcgccggcaagcagctcgaggacggccgcaccctggctgactacaac 394 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcagggg------tggtatgcag 474 |||||||||||||| ||||| ||||| ||||| || || | || ||| |||||| Sbjct: 395 atccagaaggagtcgaccctgcaccttgtgctgcgtctgcgcggtggctctggcatgcag 454 Query: 475 atcttcgtgaagaccctcaccggcaagaccatcaccctgga 515 |||||||| |||||||||||||||||||||||||||||||| Sbjct: 455 atcttcgtcaagaccctcaccggcaagaccatcaccctgga 495 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||||||||||||||||||||| || || ||| |||| Sbjct: 449 atgcagatcttcgtcaagaccctcaccggcaagaccatcaccctggacgtggagagctct 508 Query: 301 gacacgatcgacaacgt 317 ||||||||||| ||||| Sbjct: 509 gacacgatcgagaacgt 525
>gb|BC066197.1| Mus musculus ubiquitin B, mRNA (cDNA clone MGC:76690 IMAGE:6435236), complete cds Length = 1214 Score = 361 bits (182), Expect = 2e-96 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 357 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 416 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 417 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 476 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 477 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctccctgattacaac 536 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || |||||||| |||||||||||| Sbjct: 537 atccagaaagagtcaaccctgcacctggtcctccgtctgaggggtggcatgcagatcttc 596 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 597 gtgaagaccctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 656 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 657 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 715 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 716 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaagg 774 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 775 agtcaaccctgcacctgg 792 Score = 361 bits (182), Expect = 2e-96 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 129 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 188 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 189 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 248 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 249 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 308 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 309 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 368 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 369 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 428 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 429 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 487 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||| | Sbjct: 488 ctttgcc-ggcaagcagctggaagatggccgcaccctccctgattacaacatccagaaag 546 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 547 agtcaaccctgcacctgg 564 Score = 313 bits (158), Expect = 5e-82 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 585 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 644 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 645 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 704 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 705 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 764 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 765 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 824 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||| |||||| ||| | | ||||||||| Sbjct: 825 gtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagtgtcaccatcgag 884 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 885 aatgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 943 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || || ||| |||||||||||||| Sbjct: 944 ctttgcc-ggcaagcagctagaagatggccgcactctctctgattacaacatccagaa 1000 Score = 180 bits (91), Expect = 5e-42 Identities = 193/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||| | ||||| ||| || | Sbjct: 813 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 872 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 | ||| ||||| || || ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 873 gtcaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 932 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || |||||||| || |||| |||||| Sbjct: 933 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 992 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| ||||| || |||||||| Sbjct: 993 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtgg 1039
>ref|NM_011664.2| Mus musculus ubiquitin B (Ubb), mRNA Length = 1167 Score = 361 bits (182), Expect = 2e-96 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 328 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 387 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 388 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 447 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 448 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 507 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || |||||||| |||||||||||| Sbjct: 508 atccagaaagagtcaaccctgcacctggtcctccgtctgaggggtggcatgcagatcttc 567 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 568 gtgaagaccctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 627 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 628 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 686 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 687 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaagg 745 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 746 agtcaaccctgcacctgg 763 Score = 361 bits (182), Expect = 2e-96 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 100 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 159 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 160 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 219 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 220 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 279 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 280 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 339 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 340 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 399 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 400 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 458 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||| | Sbjct: 459 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaag 517 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 518 agtcaaccctgcacctgg 535 Score = 321 bits (162), Expect = 2e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 556 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 615 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 616 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 675 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 676 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 735 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 736 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 795 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||| |||||| ||| | ||||||||||| Sbjct: 796 gtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagtgacaccatcgag 855 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 856 aatgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 914 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || || ||| |||||||||||||| Sbjct: 915 ctttgcc-ggcaagcagctagaagatggccgcactctctctgattacaacatccagaa 971 Score = 188 bits (95), Expect = 2e-44 Identities = 194/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||| | ||||| ||| || | Sbjct: 784 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 843 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 844 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 903 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || |||||||| || |||| |||||| Sbjct: 904 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 963 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| ||||| || |||||||| Sbjct: 964 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtgg 1010
>ref|XM_973010.1| PREDICTED: Mus musculus ubiquitin C (Ubc), mRNA Length = 2310 Score = 361 bits (182), Expect = 2e-96 Identities = 361/419 (86%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 1234 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 1293 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1294 tgacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 1353 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 1354 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 1413 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1414 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 1473 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1474 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattga 1533 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 1534 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 1592 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1593 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1650 Score = 361 bits (182), Expect = 2e-96 Identities = 361/419 (86%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 778 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 837 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 838 tgacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 897 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 898 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 957 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 958 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 1017 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1018 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 1077 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 1078 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 1136 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1137 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1194 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1007 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1066 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1067 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1126 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1127 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1186 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1187 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtgggatgcagatcttt 1246 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1247 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 1306 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1307 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1365 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1366 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1422 Score = 353 bits (178), Expect = 6e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||| ||||||||||| ||||| ||| || Sbjct: 1690 gatgcagatctttgtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccag 1749 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1750 tgacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 1809 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 1810 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 1869 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1870 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 1929 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1930 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 1989 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 1990 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 2048 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 2049 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 2106 Score = 335 bits (169), Expect = 1e-88 Identities = 357/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1463 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1522 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1523 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1582 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1583 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1642 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| ||| | || || |||||||| ||||| ||||||||||| Sbjct: 1643 atccagaaagagtccaccctgcacttagtccttcgcctcagaggtgggatgcagatcttt 1702 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || ||||| |||||||||||||||| ||| | |||||||| || Sbjct: 1703 gtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccagtgacaccattgag 1762 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1763 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1821 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1822 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1878 Score = 327 bits (165), Expect = 3e-86 Identities = 356/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 551 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 610 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||| | || || || |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 611 gactccatagagaatgtcaaggcaaagattcaggacaaggagggcatcccccctgaccag 670 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | | ||||||| Sbjct: 671 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcaggctacaac 730 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| ||| |||| || |||||||| ||||| ||||||||||| Sbjct: 731 atccagaaagagtccaccctgcacttggtccttcgcctcagaggtgggatgcagatcttt 790 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 791 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 850 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 851 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 909 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 910 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 966 Score = 291 bits (147), Expect = 2e-75 Identities = 243/275 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1919 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1978 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1979 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 2038 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 2039 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2098 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 2099 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 2158 Query: 481 gtgaagaccctcaccggcaagaccatcaccctgga 515 ||||||||||| || |||||||||||||||||||| Sbjct: 2159 gtgaagaccctgacaggcaagaccatcaccctgga 2193 Score = 228 bits (115), Expect = 2e-56 Identities = 346/420 (82%), Gaps = 3/420 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttg-aggttgagtcct 298 |||||||||||||||||| ||| | || || |||||||||||||| | |||| ||| || Sbjct: 321 gatgcagatctttgtgaaaaccttaactggtaagaccatcaccctaggaggtcgagccca 380 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 |||||| || || || |||||||| ||||||||||||||| |||||||||||| |||| Sbjct: 381 gtgacaccattgagaatgtcaaggcaaagatccaggacaagaagggcatcccccatgacc 440 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 |||| | | |||||||| ||||||||||| || || | ||||||||| | || |||| Sbjct: 441 agcacaggatgatctttgcaggcaagcagctggaagatgtccgcaccctgtcagagtaca 500 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||| |||||| |||| ||| |||| || ||| ||| ||||| |||||||||| Sbjct: 501 acatccagaaagagtcctccctgcacgtggtccttcgctgcagaggtggcatgcagatct 560 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | ||||||||||| || |||||||||||||||||||||| ||| | ||| |||| | Sbjct: 561 ttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgactccatag 620 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 | || |||||||| ||||| ||||||||||||||||| ||||| ||||||||| || || Sbjct: 621 agaatgtcaaggcaaagattcaggacaaggagggcatcccccctgaccagcagagg-ctg 679 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 680 atctttg-caggcaagcagctggaagatggccgcaccctgtcaggctacaacatccagaa 738
>gb|BC021837.1| Mus musculus ubiquitin C, mRNA (cDNA clone MGC:30231 IMAGE:5123918), complete cds Length = 2120 Score = 361 bits (182), Expect = 2e-96 Identities = 361/419 (86%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 960 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 1019 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1020 tgacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 1079 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 1080 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 1139 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1140 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 1199 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1200 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattga 1259 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 1260 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 1318 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1319 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1376 Score = 361 bits (182), Expect = 2e-96 Identities = 361/419 (86%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 504 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 563 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 564 tgacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 623 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 624 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 683 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 684 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 743 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 744 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 803 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 804 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 862 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 863 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 920 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 733 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 792 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 793 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 852 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 853 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 912 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 913 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtgggatgcagatcttt 972 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 973 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 1032 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1033 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1091 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1092 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1148 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 277 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 336 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 337 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 396 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 397 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 456 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 457 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtgggatgcagatcttt 516 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 517 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 576 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 577 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 635 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 636 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 692 Score = 353 bits (178), Expect = 6e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||| ||||||||||| ||||| ||| || Sbjct: 1416 gatgcagatctttgtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccag 1475 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1476 tgacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 1535 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 1536 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 1595 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1596 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 1655 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1656 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 1715 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 1716 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 1774 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1775 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1832 Score = 337 bits (170), Expect = 4e-89 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||| ||| | || || |||||||||||||| ||||| ||| || Sbjct: 48 gatgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccag 107 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 108 tgacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 167 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 168 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 227 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 228 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 287 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 288 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 347 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 348 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 406 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 407 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 464 Score = 335 bits (169), Expect = 1e-88 Identities = 357/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1189 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1248 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1249 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1308 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1309 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1368 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| ||| | || || |||||||| ||||| ||||||||||| Sbjct: 1369 atccagaaagagtccaccctgcacttagtccttcgcctcagaggtgggatgcagatcttt 1428 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || ||||| |||||||||||||||| ||| | |||||||| || Sbjct: 1429 gtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccagtgacaccattgag 1488 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1489 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1547 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1548 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1604 Score = 291 bits (147), Expect = 2e-75 Identities = 243/275 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1645 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1704 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1705 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1764 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1765 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1824 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1825 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 1884 Query: 481 gtgaagaccctcaccggcaagaccatcaccctgga 515 ||||||||||| || |||||||||||||||||||| Sbjct: 1885 gtgaagaccctgacaggcaagaccatcaccctgga 1919
>gb|BC006680.1| Mus musculus ubiquitin C, mRNA (cDNA clone MGC:7811 IMAGE:3500023), complete cds Length = 1891 Score = 361 bits (182), Expect = 2e-96 Identities = 361/419 (86%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 961 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 1020 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1021 tgacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 1080 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 1081 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 1140 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1141 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 1200 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1201 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattga 1260 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 1261 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 1319 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1320 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1377 Score = 361 bits (182), Expect = 2e-96 Identities = 361/419 (86%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 505 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 564 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 565 tgacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 624 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 625 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 684 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 685 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 744 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 745 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 804 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 805 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 863 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 864 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 921 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 734 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 793 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 794 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 853 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 854 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 913 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 914 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtgggatgcagatcttt 973 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 974 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 1033 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1034 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1092 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1093 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1149 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 278 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 337 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 338 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 397 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 398 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 457 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 458 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtgggatgcagatcttt 517 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 518 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 577 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 578 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 636 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 637 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 693 Score = 337 bits (170), Expect = 4e-89 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||| ||| | || || |||||||||||||| ||||| ||| || Sbjct: 49 gatgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccag 108 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 109 tgacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 168 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 169 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 228 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 229 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 288 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 289 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 348 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 349 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 407 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 408 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 465 Score = 335 bits (169), Expect = 1e-88 Identities = 357/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1190 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1249 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1250 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1309 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1310 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1369 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| ||| | || || |||||||| ||||| ||||||||||| Sbjct: 1370 atccagaaagagtccaccctgcacttagtccttcgcctcagaggtgggatgcagatcttt 1429 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || ||||| |||||||||||||||| ||| | |||||||| || Sbjct: 1430 gtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccagtgacaccattgag 1489 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1490 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1548 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1549 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1605 Score = 285 bits (144), Expect = 1e-73 Identities = 243/276 (88%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||| ||||||||||| ||||| ||| || Sbjct: 1417 gatgcagatctttgtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccag 1476 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1477 tgacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 1536 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 1537 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 1596 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1597 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 1656 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctgga 515 ||||||||||| || |||||||||||||||||||| Sbjct: 1657 tgtgaagaccctgacaggcaagaccatcaccctgga 1692
>gb|BC100341.1| Mus musculus ubiquitin B, mRNA (cDNA clone MGC:117670 IMAGE:30787432), complete cds Length = 1145 Score = 361 bits (182), Expect = 2e-96 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 282 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 341 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 342 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 401 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 402 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 461 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || |||||||| |||||||||||| Sbjct: 462 atccagaaagagtcaaccctgcacctggtcctccgtctgaggggtggcatgcagatcttc 521 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 522 gtgaagaccctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 581 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 582 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 640 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 641 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaagg 699 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 700 agtcaaccctgcacctgg 717 Score = 361 bits (182), Expect = 2e-96 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 54 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 113 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 114 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 173 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 174 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 233 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 234 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 293 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 294 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 353 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 354 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 412 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||| | Sbjct: 413 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaag 471 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 472 agtcaaccctgcacctgg 489 Score = 321 bits (162), Expect = 2e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 510 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 569 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 570 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 629 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 630 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 689 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 690 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 749 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||| |||||| ||| | ||||||||||| Sbjct: 750 gtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagtgacaccatcgag 809 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 810 aatgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 868 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || || ||| |||||||||||||| Sbjct: 869 ctttgcc-ggcaagcagctagaagatggccgcactctctctgattacaacatccagaa 925 Score = 188 bits (95), Expect = 2e-44 Identities = 194/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||| | ||||| ||| || | Sbjct: 738 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 797 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 798 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 857 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || |||||||| || |||| |||||| Sbjct: 858 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 917 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| ||||| || |||||||| Sbjct: 918 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtgg 964
>emb|AL596181.10| Mouse DNA sequence from clone RP23-234K24 on chromosome 11 Contains nine novel genes, the Trpv2 for member 2 transient receptor potential cation channel subfamily V, the Ubb gene for ubiquitin B, the 3' end of the gene for the ortholog of human and rat phosphatidylinositol glycan class L PIGL and five CpG islands, complete sequence Length = 195339 Score = 361 bits (182), Expect = 2e-96 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 122005 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 121946 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 121945 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 121886 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 121885 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 121826 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 121825 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 121766 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 121765 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 121706 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 121705 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 121647 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||| | Sbjct: 121646 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaag 121588 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 121587 agtcaaccctgcacctgg 121570 Score = 361 bits (182), Expect = 2e-96 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 121777 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 121718 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 121717 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 121658 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 121657 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 121598 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || |||||||| |||||||||||| Sbjct: 121597 atccagaaagagtcaaccctgcacctggtcctccgtctgaggggtggcatgcagatcttc 121538 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 121537 gtgaagaccctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 121478 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 121477 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 121419 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 121418 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaagg 121360 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 121359 agtcaaccctgcacctgg 121342 Score = 321 bits (162), Expect = 2e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 121549 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 121490 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 121489 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 121430 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 121429 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 121370 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 121369 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 121310 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||| |||||| ||| | ||||||||||| Sbjct: 121309 gtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagtgacaccatcgag 121250 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 121249 aatgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 121191 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || || ||| |||||||||||||| Sbjct: 121190 ctttgcc-ggcaagcagctagaagatggccgcactctctctgattacaacatccagaa 121134 Score = 188 bits (95), Expect = 2e-44 Identities = 194/227 (85%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||| | ||||| ||| || | Sbjct: 121321 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 121262 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 121261 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 121202 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || |||||||| || |||| |||||| Sbjct: 121201 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 121142 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| ||||| || |||||||| Sbjct: 121141 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtgg 121095
>dbj|D28123.1|SOYSUBI3 Glycine max SUBI-3 gene for ubiquitin, complete cds Length = 2170 Score = 361 bits (182), Expect = 2e-96 Identities = 363/422 (86%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 ||||||||||||| || ||||||||||||||||||||||||||||||||||| || || Sbjct: 918 agatgcagatcttcgtcaagaccctcaccggcaagaccatcacccttgaggtggaaagct 977 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 ||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||||| Sbjct: 978 ctgacaccatcgacaacgtcaaggccaagatccaggacaaggaaggaatccccccggacc 1037 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 |||| || ||||| || || || ||||| |||||||||||||| |||||||||||||||| Sbjct: 1038 agcaacgtctcattttcgccggaaagcaacttgaggacggccgtacccttgctgactaca 1097 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||| ||||||||| || || ||||| || ||||| ||| | ||||| |||||||||| Sbjct: 1098 acattcagaaggagagtactcttcacctcgtcctccgtctccgtggtggcatgcagatct 1157 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 |||| ||||| ||||||||||||||||| ||||| |||| ||| || |||||||||| Sbjct: 1158 tcgttaagacactcaccggcaagaccataaccctagaggttgaaagctccgacaccatcg 1217 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 | ||||||||||| |||||||||||||||||||| || |||||||||||||| | | ||| Sbjct: 1218 ataacgtcaaggccaagatccaggacaaggagggtatccccccggaccagcaac-gtctc 1276 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || || | | || |||||||| || || ||||| ||||| || | ||||||||||||||| Sbjct: 1277 atcttcgcc-ggaaagcagctcgaggacggccgcaccctcgccgactacaacatccagaa 1335 Query: 659 gg 660 || Sbjct: 1336 gg 1337 Score = 351 bits (177), Expect = 2e-93 Identities = 364/425 (85%), Gaps = 2/425 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||| ||||||||||||||||| ||||| |||||||| ||| Sbjct: 1148 atgcagatcttcgttaagacactcaccggcaagaccataaccctagaggttgaaagctcc 1207 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 1208 gacaccatcgataacgtcaaggccaagatccaggacaaggagggtatccccccggaccag 1267 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 || || |||||||| || || |||||||| ||||||||||||||||| || ||||||||| Sbjct: 1268 caacgtctcatcttcgccggaaagcagctcgaggacggccgcaccctcgccgactacaac 1327 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||| || ||||| ||||| || ||||| ||| | ||||| |||||||||||| Sbjct: 1328 atccagaaggaatcaacccttcacctcgtcctccgtctccgtggtggcatgcagatcttc 1387 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||||||||||||||| || ||||| || | || || |||||||||||| Sbjct: 1388 gttaagaccctcaccggcaagactattaccctagaagtcgaaagctccgacaccatcgac 1447 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| ||||| |||||||||||||| || ||||| ||||||||| || || || Sbjct: 1448 aacgtcaaggctaagattcaggacaaggagggaatccccccagaccagcagagg-ctgat 1506 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | |||| |||||||| || || || || |||||||||| ||||||||||||||||| Sbjct: 1507 cttcgccggg-aagcagctcgaggacggacgcacccttgctgactacaacatccagaagg 1565 Query: 661 ggtca 665 |||| Sbjct: 1566 agtca 1570 Score = 283 bits (143), Expect = 5e-73 Identities = 352/420 (83%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||||||||||||||| || ||||| || || || ||| Sbjct: 1376 atgcagatcttcgttaagaccctcaccggcaagactattaccctagaagtcgaaagctcc 1435 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| ||||| |||||||||||||| |||||||| |||||| Sbjct: 1436 gacaccatcgacaacgtcaaggctaagattcaggacaaggagggaatccccccagaccag 1495 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||| || || |||||||| |||||||| ||||||||||||||||||||| Sbjct: 1496 cagaggctgatcttcgccgggaagcagctcgaggacggacgcacccttgctgactacaac 1555 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| || |||||| ||||| | || || | |||||||||||||| ||| Sbjct: 1556 atccagaaggagtcaactctccacttggtgttgcgtcttcgtggtggtatgcagattttc 1615 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| || || || ||||| || ||||| |||| ||| || |||||||| ||| Sbjct: 1616 gtgaagactcttacgggtaagactattaccctcgaggtggagagctctgacaccattgac 1675 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||| ||||||||||| ||||| || |||||||||||| || || || Sbjct: 1676 aatgtgaaggccaagattcaggacaaggaaggcatcccaccggaccagcagagg-ctgat 1734 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || ||||| | ||||| |||| ||||||||||||||||| Sbjct: 1735 ttttg-ctggcaagcagctcgaggatggaaggaccctcgctgactacaacatccagaagg 1793 Score = 149 bits (75), Expect = 2e-32 Identities = 180/215 (83%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| || |||||||| || || || ||||| || ||||| ||||| ||| |||| Sbjct: 1604 atgcagattttcgtgaagactcttacgggtaagactattaccctcgaggtggagagctct 1663 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| || ||||| ||||| ||||||||||| |||||||| ||||||||| Sbjct: 1664 gacaccattgacaatgtgaaggccaagattcaggacaaggaaggcatcccaccggaccag 1723 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || || ||||||||||||||||| ||||| || | ||||| |||||||||||| Sbjct: 1724 cagaggctgatttttgctggcaagcagctcgaggatggaaggaccctcgctgactacaac 1783 Query: 421 atccagaaggagtccaccctccacctggtgctccg 455 ||||||||||| || ||||| ||||| || ||||| Sbjct: 1784 atccagaaggaatcaacccttcaccttgtcctccg 1818
>dbj|AK132747.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4922505B09 product:ubiquitin B, full insert sequence Length = 1166 Score = 361 bits (182), Expect = 2e-96 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 328 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 387 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 388 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 447 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 448 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 507 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || |||||||| |||||||||||| Sbjct: 508 atccagaaagagtcaaccctgcacctggtcctccgtctgaggggtggcatgcagatcttc 567 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 568 gtgaagaccctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 627 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 628 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 686 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 687 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaagg 745 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 746 agtcaaccctgcacctgg 763 Score = 361 bits (182), Expect = 2e-96 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 100 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 159 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 160 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 219 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 220 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 279 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 280 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 339 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 340 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 399 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 400 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 458 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||| | Sbjct: 459 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaag 517 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 518 agtcaaccctgcacctgg 535 Score = 321 bits (162), Expect = 2e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 556 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 615 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 616 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 675 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 676 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 735 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 736 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 795 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||| |||||| ||| | ||||||||||| Sbjct: 796 gtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagtgacaccatcgag 855 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 856 aatgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 914 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || || ||| |||||||||||||| Sbjct: 915 ctttgcc-ggcaagcagctagaagatggccgcactctctctgattacaacatccagaa 971 Score = 188 bits (95), Expect = 2e-44 Identities = 194/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||| | ||||| ||| || | Sbjct: 784 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 843 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 844 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 903 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || |||||||| || |||| |||||| Sbjct: 904 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 963 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| ||||| || |||||||| Sbjct: 964 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtgg 1010
>dbj|AK165313.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430012C16 product:ubiquitin B, full insert sequence Length = 1159 Score = 361 bits (182), Expect = 2e-96 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 327 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 386 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 387 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 446 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 447 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 506 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || |||||||| |||||||||||| Sbjct: 507 atccagaaagagtcaaccctgcacctggtcctccgtctgaggggtggcatgcagatcttc 566 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 567 gtgaagaccctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 626 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 627 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 685 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 686 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaagg 744 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 745 agtcaaccctgcacctgg 762 Score = 353 bits (178), Expect = 6e-94 Identities = 375/438 (85%), Gaps = 3/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 100 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 159 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 160 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 219 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 220 cagaggctgatctttgccggcaagcagct-gaagatggccgcaccctctctgattacaac 278 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 279 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 338 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 339 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 398 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 399 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 457 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||| | Sbjct: 458 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaag 516 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 517 agtcaaccctgcacctgg 534 Score = 321 bits (162), Expect = 2e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 555 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 614 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 615 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 674 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 675 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 734 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 735 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 794 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||| |||||| ||| | ||||||||||| Sbjct: 795 gtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagagacaccatcgag 854 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 855 aatgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 913 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || || ||| |||||||||||||| Sbjct: 914 ctttgcc-ggcaagcagctagaagatggccgcactctctctgattacaacatccagaa 970 Score = 180 bits (91), Expect = 5e-42 Identities = 193/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||| | ||||| ||| || Sbjct: 783 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccaga 842 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 843 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 902 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || |||||||| || |||| |||||| Sbjct: 903 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 962 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| ||||| || |||||||| Sbjct: 963 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtgg 1009
>dbj|AK010625.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410036G24 product:ubiquitin B, full insert sequence Length = 1160 Score = 361 bits (182), Expect = 2e-96 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 328 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 387 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 388 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 447 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 448 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 507 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || |||||||| |||||||||||| Sbjct: 508 atccagaaagagtcaaccctgcacctggtcctccgtctgaggggtggcatgcagatcttc 567 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 568 gtgaagaccctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 627 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 628 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 686 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 687 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaagg 745 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 746 agtcaaccctgcacctgg 763 Score = 361 bits (182), Expect = 2e-96 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 100 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 159 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 160 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 219 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 220 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 279 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 280 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 339 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 340 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 399 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 400 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 458 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||| | Sbjct: 459 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaag 517 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 518 agtcaaccctgcacctgg 535 Score = 321 bits (162), Expect = 2e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 556 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 615 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 616 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 675 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 676 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 735 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 736 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 795 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||| |||||| ||| | ||||||||||| Sbjct: 796 gtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagtgacaccatcgag 855 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 856 aatgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 914 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || || ||| |||||||||||||| Sbjct: 915 ctttgcc-ggcaagcagctagaagatggccgcactctctctgattacaacatccagaa 971 Score = 188 bits (95), Expect = 2e-44 Identities = 194/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||| | ||||| ||| || | Sbjct: 784 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 843 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 844 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 903 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || |||||||| || |||| |||||| Sbjct: 904 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 963 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| ||||| || |||||||| Sbjct: 964 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtgg 1010
>dbj|AK010413.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410005G06 product:polyubiquitin 4, full insert sequence Length = 1165 Score = 361 bits (182), Expect = 2e-96 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 329 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 388 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 389 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 448 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 449 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 508 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || |||||||| |||||||||||| Sbjct: 509 atccagaaagagtcaaccctgcacctggtcctccgtctgaggggtggcatgcagatcttc 568 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 569 gtgaagaccctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 628 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 629 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 687 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 688 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaagg 746 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 747 agtcaaccctgcacctgg 764 Score = 361 bits (182), Expect = 2e-96 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 101 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 160 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 161 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 220 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 221 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 280 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 281 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 340 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 341 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 400 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 401 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 459 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||| | Sbjct: 460 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaag 518 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 519 agtcaaccctgcacctgg 536 Score = 321 bits (162), Expect = 2e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 557 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 616 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 617 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 676 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 677 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 736 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 737 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 796 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||| |||||| ||| | ||||||||||| Sbjct: 797 gtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagtgacaccatcgag 856 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 857 aatgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 915 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || || ||| |||||||||||||| Sbjct: 916 ctttgcc-ggcaagcagctagaagatggccgcactctctctgattacaacatccagaa 972 Score = 188 bits (95), Expect = 2e-44 Identities = 194/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||| | ||||| ||| || | Sbjct: 785 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 844 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 845 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 904 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || |||||||| || |||| |||||| Sbjct: 905 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 964 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| ||||| || |||||||| Sbjct: 965 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtgg 1011
>dbj|AK013027.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810407D23 product:ubiquitin B, full insert sequence Length = 1167 Score = 361 bits (182), Expect = 2e-96 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 328 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 387 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 388 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 447 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 448 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 507 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || |||||||| |||||||||||| Sbjct: 508 atccagaaagagtcaaccctgcacctggtcctccgtctgaggggtggcatgcagatcttc 567 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 568 gtgaagaccctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 627 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 628 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 686 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 687 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaagg 745 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 746 agtcaaccctgcacctgg 763 Score = 361 bits (182), Expect = 2e-96 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 100 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 159 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 160 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 219 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 220 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 279 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 280 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 339 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 340 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 399 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 400 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 458 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||| | Sbjct: 459 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaag 517 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 518 agtcaaccctgcacctgg 535 Score = 321 bits (162), Expect = 2e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 556 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 615 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 616 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 675 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 676 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 735 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 736 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 795 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||| |||||| ||| | ||||||||||| Sbjct: 796 gtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagtgacaccatcgag 855 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 856 aatgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 914 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || || ||| |||||||||||||| Sbjct: 915 ctttgcc-ggcaagcagctagaagatggccgcactctctctgattacaacatccagaa 971 Score = 188 bits (95), Expect = 2e-44 Identities = 194/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||| | ||||| ||| || | Sbjct: 784 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 843 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 844 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 903 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || |||||||| || |||| |||||| Sbjct: 904 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 963 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| ||||| || |||||||| Sbjct: 964 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtgg 1010
>dbj|AK012443.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700055N04 product:ubiquitin B, full insert sequence Length = 1166 Score = 361 bits (182), Expect = 2e-96 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 101 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 160 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 161 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 220 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 221 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 280 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 281 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 340 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 341 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 400 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 401 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 459 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||| | Sbjct: 460 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaag 518 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 519 agtcaaccctgcacctgg 536 Score = 353 bits (178), Expect = 6e-94 Identities = 374/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 329 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 388 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 389 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 448 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 449 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 508 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| |||| || |||||||| |||||||||||| Sbjct: 509 atccagaaagagtcaaccctgcacctggtcttccgtctgaggggtggcatgcagatcttc 568 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 569 gtgaagaccctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 628 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 629 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 687 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 688 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaagg 746 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 747 agtcaaccctgcacctgg 764 Score = 321 bits (162), Expect = 2e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 557 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 616 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 617 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 676 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 677 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 736 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 737 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 796 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||| |||||| ||| | ||||||||||| Sbjct: 797 gtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagtgacaccatcgag 856 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 857 aatgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 915 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || || ||| |||||||||||||| Sbjct: 916 ctttgcc-ggcaagcagctagaagatggccgcactctctctgattacaacatccagaa 972 Score = 188 bits (95), Expect = 2e-44 Identities = 194/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||| | ||||| ||| || | Sbjct: 785 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 844 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 845 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 904 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || |||||||| || |||| |||||| Sbjct: 905 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 964 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| ||||| || |||||||| Sbjct: 965 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtgg 1011
>dbj|AK007273.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700124N12 product:ubiquitin B, full insert sequence Length = 1195 Score = 361 bits (182), Expect = 2e-96 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 359 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 418 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 419 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 478 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 479 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 538 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || |||||||| |||||||||||| Sbjct: 539 atccagaaagagtcaaccctgcacctggtcctccgtctgaggggtggcatgcagatcttc 598 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 599 gtgaagaccctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 658 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 659 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 717 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 718 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaagg 776 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 777 agtcaaccctgcacctgg 794 Score = 361 bits (182), Expect = 2e-96 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 131 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 190 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 191 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 250 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 251 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 310 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 311 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 370 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 371 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 430 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 431 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 489 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||| | Sbjct: 490 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaag 548 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 549 agtcaaccctgcacctgg 566 Score = 321 bits (162), Expect = 2e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 587 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 646 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 647 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 706 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 707 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 766 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 767 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 826 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||| |||||| ||| | ||||||||||| Sbjct: 827 gtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagtgacaccatcgag 886 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 887 aatgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 945 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || || ||| |||||||||||||| Sbjct: 946 ctttgcc-ggcaagcagctagaagatggccgcactctctctgattacaacatccagaa 1002 Score = 188 bits (95), Expect = 2e-44 Identities = 194/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||| | ||||| ||| || | Sbjct: 815 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 874 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 875 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 934 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || |||||||| || |||| |||||| Sbjct: 935 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 994 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| ||||| || |||||||| Sbjct: 995 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtgg 1041
>gb|AC120412.12| Mus musculus chromosome 5, clone RP24-447P14, complete sequence Length = 149454 Score = 361 bits (182), Expect = 2e-96 Identities = 361/419 (86%), Gaps = 2/419 (0%) Strand = Plus / Minus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 4378 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 4319 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 4318 tgacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 4259 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 4258 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 4199 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 4198 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 4139 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 4138 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 4079 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 4078 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 4020 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 4019 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 3962 Score = 361 bits (182), Expect = 2e-96 Identities = 361/419 (86%), Gaps = 2/419 (0%) Strand = Plus / Minus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 3922 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 3863 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 3862 tgacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 3803 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 3802 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 3743 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 3742 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 3683 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 3682 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattga 3623 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 3622 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 3564 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 3563 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 3506 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 4605 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 4546 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 4545 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 4486 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 4485 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 4426 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 4425 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtgggatgcagatcttt 4366 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 4365 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 4306 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 4305 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 4247 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 4246 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 4190 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 4149 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 4090 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 4089 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 4030 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 4029 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 3970 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 3969 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtgggatgcagatcttt 3910 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 3909 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 3850 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 3849 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 3791 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 3790 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 3734 Score = 353 bits (178), Expect = 6e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Minus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||| ||||||||||| ||||| ||| || Sbjct: 3466 gatgcagatctttgtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccag 3407 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 3406 tgacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 3347 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 3346 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 3287 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 3286 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 3227 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 3226 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 3167 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 3166 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 3108 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 3107 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 3050 Score = 337 bits (170), Expect = 4e-89 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Minus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||| ||| | || || |||||||||||||| ||||| ||| || Sbjct: 4834 gatgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccag 4775 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 4774 tgacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 4715 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 4714 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 4655 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 4654 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 4595 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 4594 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 4535 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 4534 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 4476 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 4475 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 4418 Score = 335 bits (169), Expect = 1e-88 Identities = 357/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 3693 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 3634 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 3633 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 3574 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 3573 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 3514 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| ||| | || || |||||||| ||||| ||||||||||| Sbjct: 3513 atccagaaagagtccaccctgcacttagtccttcgcctcagaggtgggatgcagatcttt 3454 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || ||||| |||||||||||||||| ||| | |||||||| || Sbjct: 3453 gtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccagtgacaccattgag 3394 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 3393 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 3335 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 3334 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 3278 Score = 291 bits (147), Expect = 2e-75 Identities = 243/275 (88%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 3237 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 3178 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 3177 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 3118 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 3117 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 3058 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 3057 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 2998 Query: 481 gtgaagaccctcaccggcaagaccatcaccctgga 515 ||||||||||| || |||||||||||||||||||| Sbjct: 2997 gtgaagaccctgacaggcaagaccatcaccctgga 2963
>dbj|AB099083.1| Bos taurus mRNA for similar to polyubiquitin, partial cds, clone: ORCS13778 Length = 567 Score = 361 bits (182), Expect = 2e-96 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 79 atgcagatcttcgtgaaaaccctgaccggcaagaccatcaccctggaggtggagcccagt 138 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 139 gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcattccccctgaccag 198 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 199 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 258 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || ||||||||||||||||| ||| Sbjct: 259 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtggtatgcagattttc 318 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 319 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgag 378 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| ||||||||||||||||| ||||||||| || ||||| Sbjct: 379 aacgtgaaggccaagatccaggataaggagggcattccccccgaccagcagagg-ctcat 437 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| |||||||||||||| Sbjct: 438 ctttgcc-ggcaagcagctggaagatggccgcactctttctgattacaacatccagaa 494 Score = 252 bits (127), Expect = 2e-63 Identities = 220/251 (87%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| || ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 307 atgcagattttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 366 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| ||||||||||| ||||| |||||| Sbjct: 367 gacaccatcgagaacgtgaaggccaagatccaggataaggagggcattccccccgaccag 426 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 427 cagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgattacaac 486 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || ||||||||||||||||||||| Sbjct: 487 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtggtatgcagatcttc 546 Query: 481 gtgaagaccct 491 ||||||||||| Sbjct: 547 gtgaagaccct 557
>emb|X51703.1|MMUBIQU Mouse mRNA for ubiquitin Length = 1172 Score = 361 bits (182), Expect = 2e-96 Identities = 375/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 105 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 164 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 165 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 224 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 225 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 284 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 285 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 344 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 345 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 404 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 405 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 463 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||| | Sbjct: 464 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaag 522 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 523 agtcaaccctgcacctgg 540 Score = 353 bits (178), Expect = 6e-94 Identities = 374/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 333 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 392 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 393 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 452 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 453 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 512 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || |||||||| |||||||||||| Sbjct: 513 atccagaaagagtcaaccctgcacctggtcctccgtctgaggggtggcatgcagatcttc 572 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 573 gtgaagaccctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 632 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 633 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 691 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||| ||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 692 ctttgcc-ggcaaacagctggaagatggccgcaccctctctgattacaacatccagaagg 750 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 751 agtcaaccctgcacctgg 768 Score = 313 bits (158), Expect = 5e-82 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 561 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 620 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 621 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 680 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||| ||||| || || ||||||||||| |||| |||||| Sbjct: 681 cagaggctgatctttgccggcaaacagctggaagatggccgcaccctctctgattacaac 740 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 741 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 800 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||| |||||| ||| | ||||||||||| Sbjct: 801 gtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagtgacaccatcgag 860 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 861 aatgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 919 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || || ||| |||||||||||||| Sbjct: 920 ctttgcc-ggcaagcagctagaagatggccgcactctctctgattacaacatccagaa 976 Score = 188 bits (95), Expect = 2e-44 Identities = 194/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||| | ||||| ||| || | Sbjct: 789 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 848 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 849 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 908 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || |||||||| || |||| |||||| Sbjct: 909 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 968 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| ||||| || |||||||| Sbjct: 969 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtgg 1015
>dbj|D83208.1|GPIUBIY Cavia cobaya mRNA for ubiquitin, complete cds Length = 1028 Score = 361 bits (182), Expect = 2e-96 Identities = 378/442 (85%), Gaps = 2/442 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||||||||| ||||||||||||||||| ||||| ||| || | Sbjct: 275 atgcagatcttcgtgaagaccctcactggcaagaccatcaccctcgaggtagagcccagt 334 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| |||||||| |||||||||||||||||||| |||||| Sbjct: 335 gacaccattgagaatgtcaaggccaagatccaagacaaggagggcatcccccctgaccag 394 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||| |||||||||||||| || ||||| |||||||| ||||||||||| Sbjct: 395 cagaggctgatcttcgctggcaagcagctggaagacgggcgcaccctctctgactacaac 454 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 455 atccagaaggagtccaccctgcacctggtcctgcgcctgagaggtggcatgcagatcttc 514 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||||||||| ||||||||||||||||| |||| ||| | |||||||| || Sbjct: 515 gtgaagaccctcactggcaagaccatcaccctcgaggtggagcccagtgacaccattgag 574 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| |||||||| |||||||||||||| ||||| ||||||||| || || || Sbjct: 575 aatgtcaaggccaagatccaagacaaggagggcatcccccctgaccagcagagg-ctgat 633 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || ||||| || ||||| ||| ||||||||||||||||| Sbjct: 634 cttcg-ctggcaagcagctggaagatgggcgcaccctctctgactacaacatccagaagg 692 Query: 661 ggtcacccctgcccctggngct 682 ||| |||||| ||||| ||| Sbjct: 693 agtccaccctgcacctggtgct 714 Score = 343 bits (173), Expect = 6e-91 Identities = 373/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||||||||| ||||||||||||||||| ||||| ||| || | Sbjct: 503 atgcagatcttcgtgaagaccctcactggcaagaccatcaccctcgaggtggagcccagt 562 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| |||||||| |||||||||||||||||||| |||||| Sbjct: 563 gacaccattgagaatgtcaaggccaagatccaagacaaggagggcatcccccctgaccag 622 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||| |||||||||||||| || || || |||||||| ||||||||||| Sbjct: 623 cagaggctgatcttcgctggcaagcagctggaagatgggcgcaccctctctgactacaac 682 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| ||||||||||| ||||| || ||||| |||||||||||| Sbjct: 683 atccagaaggagtccaccctgcacctggtgctgcgcctgagaggtgggatgcagatcttc 742 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||||||||| ||||||||||||||||| |||| ||| | |||||||| || Sbjct: 743 gtgaagaccctcactggcaagaccatcaccctcgaggtggagcccagtgacaccattgag 802 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| |||||||| |||||||||||||| ||||| ||||||||| || || || Sbjct: 803 aatgtcaaggccaagatccaagacaaggagggcatcccccctgaccagcagagg-ctgat 861 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || || || || ||||| | | ||||||||||||||||| Sbjct: 862 cttcg-ctggcaagcagctggaagacgggcgcaccctctccgactacaacatccagaagg 920 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 921 agtccaccctgcacctgg 938 Score = 343 bits (173), Expect = 6e-91 Identities = 373/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||||||||||||||| ||||| ||| || | Sbjct: 47 atgcagatcttcgtaaagaccctcactggcaagaccatcaccctcgaggtagagcccagt 106 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| |||||||| |||||||||||||||||||| |||||| Sbjct: 107 gacaccattgagaatgtcaaggccaagatccaagacaaggagggcatcccccctgaccag 166 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||| |||||||||||||| || ||||| |||||||| ||||||||||| Sbjct: 167 cagaggctgatcttcgctggcaagcagctggaagacgggcgcaccctctctgactacaac 226 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 227 atccagaaggagtccaccctgcacctggtcctgcgcctgagaggtggcatgcagatcttc 286 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||||||||| ||||||||||||||||| |||| ||| | |||||||| || Sbjct: 287 gtgaagaccctcactggcaagaccatcaccctcgaggtagagcccagtgacaccattgag 346 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| |||||||| |||||||||||||| ||||| ||||||||| || || || Sbjct: 347 aatgtcaaggccaagatccaagacaaggagggcatcccccctgaccagcagagg-ctgat 405 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || || || || ||||| ||| ||||||||||||||||| Sbjct: 406 cttcg-ctggcaagcagctggaagacgggcgcaccctctctgactacaacatccagaagg 464 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 465 agtccaccctgcacctgg 482 Score = 224 bits (113), Expect = 4e-55 Identities = 197/225 (87%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| |||||||||||||| ||||||||||||||||| ||||| ||| || Sbjct: 730 gatgcagatcttcgtgaagaccctcactggcaagaccatcaccctcgaggtggagcccag 789 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 790 tgacaccattgagaatgtcaaggccaagatccaagacaaggagggcatcccccctgacca 849 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || ||||| |||||||||||||| || ||||| |||||||| | |||||||| Sbjct: 850 gcagaggctgatcttcgctggcaagcagctggaagacgggcgcaccctctccgactacaa 909 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcagggg 464 ||||||||||||||||||||| |||||||| || ||||| ||||| Sbjct: 910 catccagaaggagtccaccctgcacctggtcctgcgcctgagggg 954 Score = 44.1 bits (22), Expect = 0.73 Identities = 25/26 (96%) Strand = Plus / Plus Query: 721 accctcactggcaagaacatcaccct 746 |||||||||||||||| ||||||||| Sbjct: 749 accctcactggcaagaccatcaccct 774 Score = 44.1 bits (22), Expect = 0.73 Identities = 25/26 (96%) Strand = Plus / Plus Query: 721 accctcactggcaagaacatcaccct 746 |||||||||||||||| ||||||||| Sbjct: 521 accctcactggcaagaccatcaccct 546 Score = 44.1 bits (22), Expect = 0.73 Identities = 25/26 (96%) Strand = Plus / Plus Query: 721 accctcactggcaagaacatcaccct 746 |||||||||||||||| ||||||||| Sbjct: 293 accctcactggcaagaccatcaccct 318 Score = 44.1 bits (22), Expect = 0.73 Identities = 25/26 (96%) Strand = Plus / Plus Query: 721 accctcactggcaagaacatcaccct 746 |||||||||||||||| ||||||||| Sbjct: 65 accctcactggcaagaccatcaccct 90
>ref|XM_586525.2| PREDICTED: Bos taurus polyubiquitin, transcript variant 1 (UBC), mRNA Length = 2416 Score = 359 bits (181), Expect = 1e-95 Identities = 362/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 520 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 579 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 580 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 639 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 640 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 699 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 700 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 759 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 760 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 819 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 820 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 878 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 879 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaag 937 Query: 660 g 660 | Sbjct: 938 g 938 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1432 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1491 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1492 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1551 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1552 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1611 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1612 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1671 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1672 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1731 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1732 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1790 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1791 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1848 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 748 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 807 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 808 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 867 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 868 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 927 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 928 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 987 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 988 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1047 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1048 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1106 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1107 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1164 Score = 351 bits (177), Expect = 2e-93 Identities = 361/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1204 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1263 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1264 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1323 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1324 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1383 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1384 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1443 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1444 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1503 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1504 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1562 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 1563 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaag 1621 Query: 660 g 660 | Sbjct: 1622 g 1622 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1888 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1947 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1948 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2007 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2008 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2067 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2068 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2127 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2128 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 2187 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2188 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2246 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2247 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2304 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1660 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1719 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1720 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1779 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1780 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1839 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1840 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1899 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1900 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1959 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1960 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2018 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2019 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2076 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 976 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1035 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1036 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1095 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1096 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1155 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1156 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1215 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1216 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1275 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1276 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1334 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1335 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1392 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 292 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 351 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 352 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 411 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 412 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 471 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 472 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 531 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 532 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 591 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 592 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 650 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 651 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 708 Score = 313 bits (158), Expect = 5e-82 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || || |||||||| || ||||| ||| || | Sbjct: 65 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 124 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| |||||||||| |||||| || || || || ||||||||||| |||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 245 atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc 304 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 305 gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 364 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || || Sbjct: 365 aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgat 423 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 424 ctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 480 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 2116 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 2175 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2176 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2235 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2236 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2295 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2296 catccagaaagagtccac 2313
>ref|XM_874894.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 16 (UBC), mRNA Length = 2416 Score = 359 bits (181), Expect = 1e-95 Identities = 362/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 520 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 579 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 580 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 639 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 640 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 699 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 700 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 759 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 760 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 819 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 820 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 878 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 879 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaag 937 Query: 660 g 660 | Sbjct: 938 g 938 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1432 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1491 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1492 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1551 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1552 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1611 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1612 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1671 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1672 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1731 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1732 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1790 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1791 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1848 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 748 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 807 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 808 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 867 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 868 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 927 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 928 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 987 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 988 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1047 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1048 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1106 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1107 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1164 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1888 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1947 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1948 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2007 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2008 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2067 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2068 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2127 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2128 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 2187 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2188 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2246 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2247 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2304 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1660 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1719 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1720 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1779 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1780 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1839 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1840 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1899 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1900 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1959 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1960 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2018 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2019 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2076 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1204 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1263 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1264 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1323 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1324 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1383 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| |||| ||||||||||| Sbjct: 1384 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgtgatgcagatctt 1443 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1444 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1503 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1504 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1562 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1563 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1620 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 976 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1035 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1036 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1095 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1096 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1155 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1156 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1215 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1216 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1275 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1276 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1334 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1335 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1392 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 292 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 351 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 352 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 411 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 412 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 471 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 472 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 531 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 532 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 591 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 592 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 650 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 651 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 708 Score = 313 bits (158), Expect = 5e-82 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || || |||||||| || ||||| ||| || | Sbjct: 65 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 124 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| |||||||||| |||||| || || || || ||||||||||| |||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 245 atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc 304 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 305 gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 364 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || || Sbjct: 365 aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgat 423 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 424 ctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 480 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 2116 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 2175 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2176 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2235 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2236 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2295 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2296 catccagaaagagtccac 2313
>ref|XM_875774.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 27 (UBC), mRNA Length = 2458 Score = 359 bits (181), Expect = 1e-95 Identities = 362/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 106 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 165 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 166 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 225 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 226 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 285 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 286 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 345 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 346 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 405 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 406 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 464 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 465 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaag 523 Query: 660 g 660 | Sbjct: 524 g 524 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1474 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1533 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1534 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1593 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1594 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1653 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1654 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1713 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1714 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1773 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1774 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1832 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1833 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1890 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 334 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 393 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 394 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 453 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 454 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 513 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 514 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 573 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 574 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 633 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 634 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 692 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 693 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 750 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1930 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1989 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1990 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2049 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2050 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2109 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2110 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2169 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2170 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 2229 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2230 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2288 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2289 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2346 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1702 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1761 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1762 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1821 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1822 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1881 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1882 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1941 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1942 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 2001 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2002 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2060 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2061 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2118 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 790 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 849 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 850 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 909 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 910 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 969 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| |||| ||||||||||| Sbjct: 970 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgtgatgcagatctt 1029 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1030 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1089 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1090 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1148 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1149 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1206 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 562 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 621 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 622 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 681 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 682 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 741 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 742 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 801 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 802 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 861 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 862 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 920 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 921 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 978 Score = 339 bits (171), Expect = 9e-90 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1018 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1077 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1078 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1137 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1138 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1197 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1198 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1257 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1258 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1317 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1318 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1376 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1377 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1434 Score = 335 bits (169), Expect = 1e-88 Identities = 359/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1246 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1305 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1306 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1365 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1366 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1425 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1426 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1485 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1486 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1545 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1546 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1604 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 1605 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaag 1663 Query: 660 g 660 | Sbjct: 1664 g 1664 Score = 220 bits (111), Expect = 6e-54 Identities = 223/259 (86%), Gaps = 2/259 (0%) Strand = Plus / Plus Query: 400 cgcacccttgctgactacaacatccagaaggagtccaccctccacctggtgctccgcctc 459 |||||||| ||||||||||||||||||| |||||||| || |||||||| ||||||||| Sbjct: 38 cgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctccgcctc 97 Query: 460 aggggtggtatgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggt 519 || ||||| ||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 98 agaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtg 157 Query: 520 gagtcttcggacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattccc 579 ||| | ||||||||||| ||||||||||| |||||||| ||||| |||||||| ||| Sbjct: 158 gagcccagtgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatcccc 217 Query: 580 ccggaccagcagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttg 639 || ||||||||| || || || |||| |||| || ||||| || |||||||| ||||| Sbjct: 218 ccagaccagcagagg-ctgatctttgccggg-aaacagctggaagatggccgcaccctgt 275 Query: 640 ctgnctacaacatccagaa 658 ||| ||||||||||||||| Sbjct: 276 ctgactacaacatccagaa 294 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 2158 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 2217 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2218 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2277 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2278 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2337 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2338 catccagaaagagtccac 2355 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Plus Query: 244 cagatctttgtgaagaccctcac 266 ||||||||||||||||||||||| Sbjct: 1 cagatctttgtgaagaccctcac 23
>ref|XM_874811.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 15 (UBC), mRNA Length = 2416 Score = 359 bits (181), Expect = 1e-95 Identities = 362/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 520 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 579 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 580 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 639 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 640 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 699 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 700 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 759 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 760 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 819 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 820 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 878 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 879 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaag 937 Query: 660 g 660 | Sbjct: 938 g 938 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1432 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1491 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1492 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1551 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1552 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1611 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1612 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1671 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1672 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1731 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1732 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1790 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1791 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1848 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 748 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 807 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 808 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 867 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 868 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 927 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 928 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 987 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 988 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1047 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1048 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1106 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1107 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1164 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1888 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1947 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1948 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2007 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2008 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2067 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2068 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2127 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2128 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 2187 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2188 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2246 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2247 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2304 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1660 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1719 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1720 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1779 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1780 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1839 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1840 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1899 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1900 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1959 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1960 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2018 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2019 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2076 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 976 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1035 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1036 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1095 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1096 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1155 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1156 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1215 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1216 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1275 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1276 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1334 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1335 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1392 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 292 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 351 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 352 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 411 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 412 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 471 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 472 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 531 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 532 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 591 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 592 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 650 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 651 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 708 Score = 343 bits (173), Expect = 6e-91 Identities = 360/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1204 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1263 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1264 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1323 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1324 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1383 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| |||| ||||||||||| Sbjct: 1384 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgtgatgcagatctt 1443 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1444 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1503 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1504 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1562 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 1563 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaag 1621 Query: 660 g 660 | Sbjct: 1622 g 1622 Score = 313 bits (158), Expect = 5e-82 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || || |||||||| || ||||| ||| || | Sbjct: 65 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 124 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| |||||||||| |||||| || || || || ||||||||||| |||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 245 atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc 304 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 305 gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 364 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || || Sbjct: 365 aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgat 423 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 424 ctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 480 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 2116 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 2175 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2176 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2235 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2236 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2295 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2296 catccagaaagagtccac 2313
>ref|XM_874725.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 14 (UBC), mRNA Length = 2644 Score = 359 bits (181), Expect = 1e-95 Identities = 362/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 520 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 579 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 580 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 639 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 640 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 699 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 700 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 759 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 760 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 819 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 820 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 878 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 879 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaag 937 Query: 660 g 660 | Sbjct: 938 g 938 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 748 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 807 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 808 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 867 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 868 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 927 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 928 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 987 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 988 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1047 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1048 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1106 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1107 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1164 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 2116 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 2175 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2176 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2235 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2236 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2295 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2296 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2355 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2356 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 2415 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2416 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2474 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2475 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2532 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1888 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1947 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1948 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2007 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2008 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2067 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2068 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2127 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 2128 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 2187 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2188 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2246 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2247 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2304 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1204 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1263 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1264 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1323 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1324 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1383 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| |||| ||||||||||| Sbjct: 1384 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgtgatgcagatctt 1443 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1444 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1503 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1504 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1562 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1563 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1620 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 976 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1035 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1036 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1095 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1096 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1155 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1156 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1215 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1216 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1275 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1276 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1334 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1335 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1392 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 292 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 351 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 352 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 411 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 412 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 471 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 472 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 531 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 532 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 591 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 592 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 650 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 651 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 708 Score = 339 bits (171), Expect = 9e-90 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1660 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1719 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1720 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1779 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1780 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1839 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1840 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1899 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1900 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1959 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1960 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2018 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2019 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2076 Score = 339 bits (171), Expect = 9e-90 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1432 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1491 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1492 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1551 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1552 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1611 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1612 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1671 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1672 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1731 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1732 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1790 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1791 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1848 Score = 313 bits (158), Expect = 5e-82 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || || |||||||| || ||||| ||| || | Sbjct: 65 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 124 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| |||||||||| |||||| || || || || ||||||||||| |||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 245 atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc 304 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 305 gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 364 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || || Sbjct: 365 aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgat 423 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 424 ctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 480 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 2344 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 2403 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2404 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2463 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2464 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2523 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2524 catccagaaagagtccac 2541
>ref|XM_874640.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 13 (UBC), mRNA Length = 2644 Score = 359 bits (181), Expect = 1e-95 Identities = 362/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 520 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 579 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 580 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 639 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 640 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 699 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 700 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 759 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 760 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 819 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 820 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 878 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 879 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaag 937 Query: 660 g 660 | Sbjct: 938 g 938 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1660 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1719 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1720 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1779 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1780 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1839 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1840 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1899 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1900 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1959 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1960 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2018 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2019 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2076 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 748 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 807 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 808 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 867 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 868 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 927 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 928 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 987 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 988 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1047 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1048 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1106 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1107 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1164 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 2116 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 2175 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2176 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2235 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2236 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2295 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2296 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2355 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2356 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 2415 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2416 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2474 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2475 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2532 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1888 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1947 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1948 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2007 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2008 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2067 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2068 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2127 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 2128 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 2187 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2188 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2246 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2247 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2304 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 976 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1035 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1036 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1095 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1096 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1155 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1156 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1215 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1216 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1275 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1276 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1334 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1335 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1392 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 292 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 351 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 352 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 411 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 412 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 471 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 472 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 531 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 532 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 591 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 592 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 650 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 651 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 708 Score = 339 bits (171), Expect = 9e-90 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1204 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1263 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1264 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1323 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1324 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1383 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1384 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1443 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1444 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1503 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1504 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1562 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1563 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1620 Score = 335 bits (169), Expect = 1e-88 Identities = 359/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1432 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1491 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1492 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1551 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1552 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1611 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1612 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1671 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1672 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1731 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1732 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1790 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 1791 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaag 1849 Query: 660 g 660 | Sbjct: 1850 g 1850 Score = 313 bits (158), Expect = 5e-82 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || || |||||||| || ||||| ||| || | Sbjct: 65 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 124 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| |||||||||| |||||| || || || || ||||||||||| |||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 245 atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc 304 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 305 gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 364 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || || Sbjct: 365 aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgat 423 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 424 ctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 480 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 2344 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 2403 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2404 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2463 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2464 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2523 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2524 catccagaaagagtccac 2541
>ref|XM_875701.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 26 (UBC), mRNA Length = 2580 Score = 359 bits (181), Expect = 1e-95 Identities = 362/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 228 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 287 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 288 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 347 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 348 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 407 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 408 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 467 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 468 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 527 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 528 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 586 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 587 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaag 645 Query: 660 g 660 | Sbjct: 646 g 646 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1596 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1655 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1656 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1715 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1716 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1775 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1776 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1835 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1836 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1895 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1896 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1954 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1955 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2012 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 456 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 515 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 516 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 575 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 576 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 635 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 636 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 695 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 696 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 755 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 756 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 814 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 815 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 872 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 2052 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 2111 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2112 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2171 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2172 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2231 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2232 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2291 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2292 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 2351 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2352 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2410 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2411 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2468 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1824 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1883 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1884 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1943 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1944 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2003 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2004 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2063 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 2064 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 2123 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2124 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2182 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2183 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2240 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 912 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 971 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 972 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1031 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1032 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1091 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| |||| ||||||||||| Sbjct: 1092 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgtgatgcagatctt 1151 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1152 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1211 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1212 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1270 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1271 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1328 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 684 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 743 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 744 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 803 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 804 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 863 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 864 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 923 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 924 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 983 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 984 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1042 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1043 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1100 Score = 339 bits (171), Expect = 9e-90 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1140 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1199 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1200 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1259 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1260 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1319 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1320 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1379 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1380 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1439 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1440 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1498 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1499 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1556 Score = 335 bits (169), Expect = 1e-88 Identities = 359/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1368 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1427 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1428 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1487 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1488 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1547 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1548 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1607 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1608 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1667 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1668 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1726 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 1727 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaag 1785 Query: 660 g 660 | Sbjct: 1786 g 1786 Score = 321 bits (162), Expect = 2e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || || |||||||| || ||||| ||| || | Sbjct: 1 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 60 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| |||||||||| |||||| || || || || ||||||||||| |||||| Sbjct: 61 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 120 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct: 121 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 180 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 181 atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc 240 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 241 gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 300 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || || Sbjct: 301 aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgat 359 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 360 ctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 416 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 2280 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 2339 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2340 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2399 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2400 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2459 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2460 catccagaaagagtccac 2477
>ref|XM_875631.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 25 (UBC), mRNA Length = 2644 Score = 359 bits (181), Expect = 1e-95 Identities = 362/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 520 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 579 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 580 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 639 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 640 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 699 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 700 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 759 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 760 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 819 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 820 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 878 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 879 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaag 937 Query: 660 g 660 | Sbjct: 938 g 938 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1660 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1719 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1720 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1779 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1780 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1839 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1840 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1899 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1900 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1959 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1960 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2018 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2019 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2076 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 748 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 807 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 808 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 867 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 868 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 927 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 928 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 987 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 988 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1047 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1048 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1106 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1107 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1164 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 2116 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 2175 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2176 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2235 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2236 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2295 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2296 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2355 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2356 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 2415 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2416 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2474 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2475 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2532 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1888 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1947 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1948 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2007 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2008 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2067 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2068 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2127 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 2128 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 2187 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2188 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2246 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2247 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2304 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 976 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1035 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1036 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1095 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1096 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1155 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1156 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1215 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1216 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1275 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1276 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1334 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1335 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1392 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 292 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 351 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 352 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 411 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 412 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 471 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 472 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 531 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 532 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 591 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 592 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 650 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 651 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 708 Score = 339 bits (171), Expect = 9e-90 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1204 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1263 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1264 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1323 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1324 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1383 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1384 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1443 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1444 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1503 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1504 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1562 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1563 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1620 Score = 335 bits (169), Expect = 1e-88 Identities = 359/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1432 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1491 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1492 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1551 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1552 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1611 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1612 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1671 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1672 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1731 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1732 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1790 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 1791 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaag 1849 Query: 660 g 660 | Sbjct: 1850 g 1850 Score = 313 bits (158), Expect = 5e-82 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || || |||||||| || ||||| ||| || | Sbjct: 65 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 124 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| |||||||||| |||||| || || || || ||||||||||| |||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 245 atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc 304 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 305 gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 364 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || || Sbjct: 365 aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgat 423 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 424 ctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 480 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 2344 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 2403 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2404 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2463 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2464 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2523 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2524 catccagaaagagtccac 2541
>ref|XM_875261.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 20 (UBC), mRNA Length = 2643 Score = 359 bits (181), Expect = 1e-95 Identities = 362/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 520 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 579 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 580 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 639 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 640 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 699 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 700 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 759 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 760 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 819 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 820 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 878 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 879 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaag 937 Query: 660 g 660 | Sbjct: 938 g 938 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 748 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 807 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 808 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 867 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 868 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 927 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 928 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 987 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 988 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1047 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1048 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1106 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1107 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1164 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 2116 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 2175 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2176 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2235 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2236 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2295 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2296 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2355 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2356 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 2415 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2416 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2474 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2475 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2532 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1888 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1947 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1948 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2007 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 2008 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 2067 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2068 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2127 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 2128 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 2187 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2188 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2246 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2247 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2304 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1204 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1263 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1264 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1323 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1324 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1383 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| |||| ||||||||||| Sbjct: 1384 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgtgatgcagatctt 1443 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1444 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1503 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1504 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1562 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1563 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1620 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 976 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1035 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1036 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1095 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1096 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1155 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1156 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1215 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1216 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1275 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1276 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1334 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1335 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1392 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 292 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 351 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 352 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 411 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 412 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 471 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 472 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 531 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 532 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 591 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 592 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 650 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 651 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 708 Score = 339 bits (171), Expect = 9e-90 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1432 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1491 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1492 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1551 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1552 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1611 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1612 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1671 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1672 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1731 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1732 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1790 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1791 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1848 Score = 335 bits (169), Expect = 1e-88 Identities = 359/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1660 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1719 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1720 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1779 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1780 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1839 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1840 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1899 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1900 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1959 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1960 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2018 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 2019 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaag 2077 Query: 660 g 660 | Sbjct: 2078 g 2078 Score = 313 bits (158), Expect = 5e-82 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || || |||||||| || ||||| ||| || | Sbjct: 65 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 124 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| |||||||||| |||||| || || || || ||||||||||| |||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 245 atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc 304 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 305 gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 364 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || || Sbjct: 365 aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgat 423 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 424 ctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 480 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 2344 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 2403 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2404 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2463 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2464 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2523 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2524 catccagaaagagtccac 2541
>ref|XM_875130.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 18 (UBC), mRNA Length = 2825 Score = 359 bits (181), Expect = 1e-95 Identities = 362/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 520 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 579 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 580 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 639 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 640 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 699 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 700 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 759 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 760 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 819 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 820 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 878 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 879 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaag 937 Query: 660 g 660 | Sbjct: 938 g 938 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 748 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 807 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 808 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 867 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 868 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 927 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 928 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 987 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 988 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1047 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1048 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1106 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1107 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1164 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 2300 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 2359 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2360 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2419 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2420 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2479 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2480 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2539 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2540 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 2599 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2600 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2658 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2659 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2716 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1204 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1263 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1264 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1323 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1324 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1383 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| |||| ||||||||||| Sbjct: 1384 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgtgatgcagatctt 1443 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1444 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1503 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1504 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1562 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1563 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1620 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 976 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1035 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1036 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1095 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1096 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1155 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1156 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1215 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1216 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1275 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1276 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1334 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1335 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1392 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 292 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 351 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 352 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 411 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 412 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 471 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 472 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 531 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 532 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 591 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 592 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 650 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 651 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 708 Score = 339 bits (171), Expect = 9e-90 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1432 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1491 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1492 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1551 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1552 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1611 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1612 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1671 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1672 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1731 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1732 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1790 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1791 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1848 Score = 335 bits (169), Expect = 1e-88 Identities = 359/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1660 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1719 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1720 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1779 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1780 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1839 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1840 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1899 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1900 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1959 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1960 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2018 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 2019 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaag 2077 Query: 660 g 660 | Sbjct: 2078 g 2078 Score = 333 bits (168), Expect = 5e-88 Identities = 306/352 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1888 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1947 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1948 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2007 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 2008 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 2067 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2068 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2127 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2128 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 2187 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| Sbjct: 2188 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcag 2239 Score = 313 bits (158), Expect = 5e-82 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || || |||||||| || ||||| ||| || | Sbjct: 65 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 124 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| |||||||||| |||||| || || || || ||||||||||| |||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 245 atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc 304 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 305 gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 364 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || || Sbjct: 365 aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgat 423 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 424 ctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 480 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 2528 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 2587 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2588 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2647 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2648 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2707 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2708 catccagaaagagtccac 2725 Score = 174 bits (88), Expect = 3e-40 Identities = 194/228 (85%), Gaps = 2/228 (0%) Strand = Plus / Plus Query: 431 agtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttcgtgaagaccc 490 ||||||| || |||||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 2263 agtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttcgtgaagacct 2322 Query: 491 tcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgacaacgtcaagg 550 | ||||||||||||||||| ||||||| ||| | ||||||||||| |||||||||| Sbjct: 2323 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 2382 Query: 551 cgaagatccaggacaaggagggcattcccccggaccagcagcggcctcatntttgncggg 610 | |||||||| ||||| |||||||| ||||| ||||||||| || || || |||| |||| Sbjct: 2383 ccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgatctttgccggg 2441 Query: 611 caagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2442 -aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2488 Score = 139 bits (70), Expect = 2e-29 Identities = 121/138 (87%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 2116 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 2175 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2176 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2235 Query: 360 gcagcgcctcatctttgc 377 |||| | || |||||||| Sbjct: 2236 gcagaggctgatctttgc 2253
>ref|XM_875488.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 23 (UBC), mRNA Length = 2644 Score = 359 bits (181), Expect = 1e-95 Identities = 362/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 520 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 579 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 580 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 639 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 640 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 699 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 700 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 759 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 760 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 819 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 820 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 878 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 879 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaag 937 Query: 660 g 660 | Sbjct: 938 g 938 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1660 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1719 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1720 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1779 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1780 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1839 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1840 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1899 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1900 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1959 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1960 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2018 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2019 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2076 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 748 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 807 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 808 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 867 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 868 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 927 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 928 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 987 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 988 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1047 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1048 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1106 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1107 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1164 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 2116 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 2175 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2176 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2235 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2236 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2295 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2296 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2355 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2356 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 2415 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2416 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2474 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2475 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2532 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1888 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1947 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1948 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2007 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2008 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2067 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2068 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2127 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 2128 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 2187 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2188 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2246 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2247 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2304 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 976 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1035 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1036 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1095 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1096 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1155 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1156 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1215 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1216 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1275 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1276 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1334 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1335 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1392 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 292 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 351 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 352 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 411 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 412 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 471 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 472 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 531 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 532 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 591 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 592 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 650 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 651 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 708 Score = 343 bits (173), Expect = 6e-91 Identities = 360/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1432 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1491 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1492 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1551 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1552 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1611 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1612 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1671 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1672 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1731 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1732 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1790 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 1791 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaag 1849 Query: 660 g 660 | Sbjct: 1850 g 1850 Score = 339 bits (171), Expect = 9e-90 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1204 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1263 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1264 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1323 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1324 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1383 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| |||| ||||||||||| Sbjct: 1384 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgtgatgcagatctt 1443 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1444 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1503 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1504 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1562 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1563 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1620 Score = 313 bits (158), Expect = 5e-82 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || || |||||||| || ||||| ||| || | Sbjct: 65 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 124 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| |||||||||| |||||| || || || || ||||||||||| |||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 245 atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc 304 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 305 gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 364 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || || Sbjct: 365 aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgat 423 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 424 ctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 480 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 2344 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 2403 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2404 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2463 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2464 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2523 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2524 catccagaaagagtccac 2541
>ref|XM_875413.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 22 (UBC), mRNA Length = 2644 Score = 359 bits (181), Expect = 1e-95 Identities = 362/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 520 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 579 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 580 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 639 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 640 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 699 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 700 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 759 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 760 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 819 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 820 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 878 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 879 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaag 937 Query: 660 g 660 | Sbjct: 938 g 938 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 748 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 807 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 808 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 867 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 868 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 927 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 928 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 987 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 988 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1047 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1048 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1106 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1107 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1164 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 2116 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 2175 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2176 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2235 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2236 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2295 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2296 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2355 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2356 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 2415 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2416 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2474 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2475 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2532 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1888 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1947 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1948 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2007 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2008 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2067 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2068 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2127 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 2128 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 2187 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2188 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2246 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2247 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2304 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1204 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1263 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1264 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1323 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1324 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1383 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| |||| ||||||||||| Sbjct: 1384 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgtgatgcagatctt 1443 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1444 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1503 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1504 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1562 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1563 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1620 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 976 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1035 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1036 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1095 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1096 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1155 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1156 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1215 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1216 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1275 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1276 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1334 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1335 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1392 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 292 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 351 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 352 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 411 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 412 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 471 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 472 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 531 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 532 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 591 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 592 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 650 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 651 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 708 Score = 339 bits (171), Expect = 9e-90 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1660 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1719 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1720 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1779 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1780 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1839 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1840 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1899 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1900 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1959 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1960 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2018 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2019 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2076 Score = 339 bits (171), Expect = 9e-90 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1432 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1491 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1492 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1551 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1552 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1611 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1612 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1671 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1672 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1731 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1732 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1790 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1791 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1848 Score = 313 bits (158), Expect = 5e-82 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || || |||||||| || ||||| ||| || | Sbjct: 65 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 124 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| |||||||||| |||||| || || || || ||||||||||| |||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 245 atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc 304 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 305 gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 364 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || || Sbjct: 365 aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgat 423 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 424 ctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 480 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 2344 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 2403 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2404 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2463 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2464 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2523 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2524 catccagaaagagtccac 2541
>ref|XM_875335.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 21 (UBC), mRNA Length = 2659 Score = 359 bits (181), Expect = 1e-95 Identities = 362/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 520 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 579 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 580 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 639 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 640 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 699 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 700 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 759 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 760 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 819 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 820 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 878 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 879 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaag 937 Query: 660 g 660 | Sbjct: 938 g 938 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1675 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1734 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1735 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1794 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1795 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1854 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1855 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1914 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1915 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1974 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1975 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2033 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2034 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2091 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 2131 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 2190 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2191 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2250 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2251 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2310 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2311 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2370 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2371 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 2430 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2431 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2489 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2490 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2547 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1903 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1962 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1963 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2022 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2023 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2082 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2083 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2142 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 2143 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 2202 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2203 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2261 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2262 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2319 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 292 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 351 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 352 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 411 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 412 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 471 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 472 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 531 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 532 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 591 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 592 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 650 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 651 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 708 Score = 339 bits (171), Expect = 9e-90 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1219 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1278 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1279 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1338 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1339 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1398 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1399 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1458 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1459 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1518 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1519 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1577 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1578 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1635 Score = 335 bits (169), Expect = 1e-88 Identities = 359/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1447 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1506 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1507 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1566 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1567 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1626 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1627 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1686 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1687 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1746 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1747 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1805 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 1806 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaag 1864 Query: 660 g 660 | Sbjct: 1865 g 1865 Score = 313 bits (158), Expect = 5e-82 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || || |||||||| || ||||| ||| || | Sbjct: 65 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 124 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| |||||||||| |||||| || || || || ||||||||||| |||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 245 atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc 304 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 305 gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 364 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || || Sbjct: 365 aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgat 423 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 424 ctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 480 Score = 307 bits (155), Expect = 3e-80 Identities = 330/387 (85%), Gaps = 2/387 (0%) Strand = Plus / Plus Query: 272 agaccatcacccttgaggttgagtcctctgacacgatcgacaacgtcaaggcgaagatcc 331 ||||||||||||| ||||| ||| || |||||| ||||| ||||||||||| ||||||| Sbjct: 1023 agaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaagatcc 1082 Query: 332 aggacaaggagggcatccccccggaccagcagcgcctcatctttgctggcaagcagcttg 391 | ||||| |||||||||||||| ||||||||| | || |||||||| || || ||||| | Sbjct: 1083 aagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctgg 1142 Query: 392 aggacggccgcacccttgctgactacaacatccagaaggagtccaccctccacctggtgc 451 | || ||||||||||| ||||||||||||||||||| |||||||| || |||||||| | Sbjct: 1143 aagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcc 1202 Query: 452 tccgcctcaggggtggtatgcagatcttcgtgaagaccctcaccggcaagaccatcaccc 511 |||||||||| |||| ||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 1203 tccgcctcagaggtgtgatgcagatcttcgtgaagaccttgaccggcaagaccatcaccc 1262 Query: 512 tggagggtgagtcttcggacaccatcgacaacgtcaaggcgaagatccaggacaaggagg 571 |||||| ||| | ||||||||||| ||||||||||| |||||||| ||||| |||| Sbjct: 1263 tggaggtggagcccagtgacaccatcgagaacgtcaaggccaagatccaagacaaagagg 1322 Query: 572 gcattcccccggaccagcagcggcctcatntttgncgggcaagcagcttgangatggccg 631 |||| ||||| ||||||||| || || || |||| |||| || ||||| || |||||||| Sbjct: 1323 gcatccccccagaccagcagagg-ctgatctttgccggg-aaacagctggaagatggccg 1380 Query: 632 aacccttgctgnctacaacatccagaa 658 ||||| ||| ||||||||||||||| Sbjct: 1381 caccctgtctgactacaacatccagaa 1407 Score = 295 bits (149), Expect = 1e-76 Identities = 245/277 (88%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 748 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 807 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 808 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 867 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 868 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 927 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 928 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 987 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggag 516 |||||||||| | |||||||||||||||||||||||| Sbjct: 988 cgtgaagaccttgaccggcaagaccatcaccctggag 1024 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 2359 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 2418 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2419 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2478 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2479 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2538 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2539 catccagaaagagtccac 2556
>ref|XM_874550.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 12 (UBC), mRNA Length = 2188 Score = 359 bits (181), Expect = 1e-95 Identities = 362/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 520 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 579 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 580 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 639 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 640 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 699 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 700 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 759 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 760 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 819 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 820 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 878 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 879 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaag 937 Query: 660 g 660 | Sbjct: 938 g 938 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1204 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1263 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1264 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1323 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1324 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1383 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1384 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1443 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1444 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1503 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1504 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1562 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1563 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1620 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 748 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 807 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 808 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 867 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 868 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 927 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 928 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 987 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 988 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1047 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1048 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1106 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1107 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1164 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1660 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1719 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1720 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1779 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1780 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1839 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1840 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1899 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1900 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1959 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1960 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2018 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2019 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2076 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1432 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1491 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1492 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1551 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1552 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1611 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1612 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1671 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1672 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1731 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1732 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1790 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1791 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1848 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 976 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1035 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1036 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1095 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1096 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1155 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1156 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1215 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1216 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1275 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1276 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1334 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1335 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1392 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 292 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 351 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 352 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 411 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 412 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 471 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 472 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 531 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 532 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 591 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 592 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 650 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 651 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 708 Score = 313 bits (158), Expect = 5e-82 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || || |||||||| || ||||| ||| || | Sbjct: 65 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 124 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| |||||||||| |||||| || || || || ||||||||||| |||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 245 atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc 304 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 305 gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 364 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || || Sbjct: 365 aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgat 423 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 424 ctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 480 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1888 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1947 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1948 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2007 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2008 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2067 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2068 catccagaaagagtccac 2085
>ref|XM_874473.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 11 (UBC), mRNA Length = 2415 Score = 359 bits (181), Expect = 1e-95 Identities = 362/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 520 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 579 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 580 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 639 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 640 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 699 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 700 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 759 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 760 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 819 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 820 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 878 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 879 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaag 937 Query: 660 g 660 | Sbjct: 938 g 938 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1888 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1947 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1948 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2007 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2008 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2067 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2068 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2127 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2128 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 2187 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2188 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2246 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2247 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2304 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 748 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 807 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 808 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 867 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 868 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 927 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 928 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 987 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 988 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1047 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1048 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1106 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1107 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1164 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1204 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1263 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1264 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1323 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1324 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1383 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| |||| ||||||||||| Sbjct: 1384 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgtgatgcagatctt 1443 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1444 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1503 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1504 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1562 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1563 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1620 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 976 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1035 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1036 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1095 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1096 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1155 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1156 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1215 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1216 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1275 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1276 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1334 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1335 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1392 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 292 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 351 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 352 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 411 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 412 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 471 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 472 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 531 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 532 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 591 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 592 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 650 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 651 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 708 Score = 339 bits (171), Expect = 9e-90 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1660 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1719 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1720 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1779 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1780 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1839 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1840 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1899 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1900 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1959 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1960 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2018 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2019 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2076 Score = 339 bits (171), Expect = 9e-90 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1432 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1491 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1492 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1551 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1552 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1611 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1612 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1671 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1672 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1731 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1732 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1790 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1791 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1848 Score = 313 bits (158), Expect = 5e-82 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || || |||||||| || ||||| ||| || | Sbjct: 65 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 124 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| |||||||||| |||||| || || || || ||||||||||| |||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 245 atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc 304 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 305 gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 364 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || || Sbjct: 365 aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgat 423 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 424 ctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 480 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 2116 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 2175 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2176 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2235 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2236 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2295 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2296 catccagaaagagtccac 2313
>ref|XM_874390.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 10 (UBC), mRNA Length = 2415 Score = 359 bits (181), Expect = 1e-95 Identities = 362/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 520 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 579 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 580 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 639 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 640 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 699 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 700 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 759 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 760 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 819 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 820 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 878 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 879 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaag 937 Query: 660 g 660 | Sbjct: 938 g 938 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 748 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 807 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 808 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 867 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 868 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 927 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 928 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 987 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 988 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1047 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1048 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1106 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1107 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1164 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1888 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1947 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1948 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2007 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2008 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2067 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2068 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2127 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2128 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 2187 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2188 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2246 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2247 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2304 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1204 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1263 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1264 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1323 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1324 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1383 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| |||| ||||||||||| Sbjct: 1384 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgtgatgcagatctt 1443 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1444 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1503 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1504 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1562 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1563 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1620 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 976 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1035 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1036 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1095 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1096 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1155 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1156 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1215 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1216 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1275 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1276 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1334 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1335 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1392 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 292 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 351 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 352 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 411 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 412 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 471 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 472 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 531 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 532 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 591 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 592 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 650 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 651 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 708 Score = 339 bits (171), Expect = 9e-90 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1432 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1491 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1492 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1551 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1552 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1611 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1612 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1671 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1672 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1731 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1732 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1790 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1791 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1848 Score = 331 bits (167), Expect = 2e-87 Identities = 357/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1660 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1719 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1720 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1779 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1780 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1839 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1840 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1899 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1900 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1959 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1960 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2018 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2019 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2076 Score = 313 bits (158), Expect = 5e-82 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || || |||||||| || ||||| ||| || | Sbjct: 65 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 124 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| |||||||||| |||||| || || || || ||||||||||| |||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 245 atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc 304 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 305 gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 364 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || || Sbjct: 365 aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgat 423 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 424 ctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 480 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 2116 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 2175 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2176 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2235 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2236 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2295 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2296 catccagaaagagtccac 2313
>ref|XM_874317.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 9 (UBC), mRNA Length = 2416 Score = 359 bits (181), Expect = 1e-95 Identities = 362/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 520 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 579 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 580 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 639 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 640 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 699 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 700 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 759 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 760 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 819 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 820 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 878 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 879 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaag 937 Query: 660 g 660 | Sbjct: 938 g 938 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 748 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 807 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 808 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 867 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 868 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 927 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 928 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 987 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 988 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1047 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1048 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1106 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1107 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1164 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1888 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1947 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1948 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2007 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2008 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2067 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2068 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2127 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2128 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 2187 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2188 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2246 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2247 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2304 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1432 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1491 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1492 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1551 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1552 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1611 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1612 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1671 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1672 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1731 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1732 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1790 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1791 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1848 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1204 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1263 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1264 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1323 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1324 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1383 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| |||| ||||||||||| Sbjct: 1384 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgtgatgcagatctt 1443 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1444 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1503 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1504 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1562 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1563 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1620 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 976 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1035 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1036 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1095 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1096 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1155 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1156 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1215 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1216 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1275 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1276 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1334 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1335 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1392 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 292 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 351 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 352 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 411 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 412 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 471 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 472 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 531 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 532 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 591 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 592 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 650 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 651 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 708 Score = 339 bits (171), Expect = 9e-90 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1660 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1719 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1720 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1779 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1780 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1839 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1840 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1899 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1900 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1959 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1960 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2018 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2019 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2076 Score = 313 bits (158), Expect = 5e-82 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || || |||||||| || ||||| ||| || | Sbjct: 65 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 124 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| |||||||||| |||||| || || || || ||||||||||| |||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 245 atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc 304 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 305 gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 364 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || || Sbjct: 365 aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgat 423 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 424 ctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 480 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 2116 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 2175 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2176 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2235 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2236 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2295 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2296 catccagaaagagtccac 2313
>ref|XM_874230.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 8 (UBC), mRNA Length = 2613 Score = 359 bits (181), Expect = 1e-95 Identities = 362/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 381 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 440 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 441 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 500 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 501 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 560 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 561 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 620 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 621 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 680 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 681 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 739 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 740 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaag 798 Query: 660 g 660 | Sbjct: 799 g 799 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1629 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1688 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1689 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1748 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1749 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1808 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1809 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1868 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1869 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1928 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1929 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1987 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1988 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2045 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 2085 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 2144 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2145 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2204 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2205 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2264 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2265 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2324 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2325 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 2384 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2385 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2443 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2444 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2501 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1857 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1916 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1917 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1976 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1977 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2036 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2037 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2096 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 2097 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 2156 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2157 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2215 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2216 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2273 Score = 341 bits (172), Expect = 2e-90 Identities = 307/352 (87%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 609 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 668 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 669 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 728 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 729 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 788 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 789 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 848 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 849 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 908 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| Sbjct: 909 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcag 960 Score = 339 bits (171), Expect = 9e-90 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1173 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1232 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1233 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1292 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1293 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1352 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1353 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1412 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1413 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1472 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1473 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1531 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1532 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1589 Score = 335 bits (169), Expect = 1e-88 Identities = 359/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1401 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1460 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1461 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1520 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1521 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1580 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1581 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1640 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1641 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1700 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1701 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1759 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 1760 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaag 1818 Query: 660 g 660 | Sbjct: 1819 g 1819 Score = 291 bits (147), Expect = 2e-75 Identities = 307/359 (85%), Gaps = 2/359 (0%) Strand = Plus / Plus Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1005 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1064 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1065 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1124 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| |||| ||||||||||| Sbjct: 1125 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgtgatgcagatctt 1184 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1185 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1244 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1245 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1303 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1304 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1361 Score = 291 bits (147), Expect = 2e-75 Identities = 307/359 (85%), Gaps = 2/359 (0%) Strand = Plus / Plus Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 213 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 272 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 273 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 332 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 333 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 392 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 393 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 452 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 453 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 511 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 512 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 569 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 2313 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 2372 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2373 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2432 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2433 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2492 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2493 catccagaaagagtccac 2510 Score = 157 bits (79), Expect = 7e-35 Identities = 175/207 (84%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || || |||||||| || ||||| ||| || | Sbjct: 1 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 60 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| |||||||||| |||||| || || || || ||||||||||| |||||| Sbjct: 61 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 120 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct: 121 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 180 Query: 421 atccagaaggagtccaccctccacctg 447 |||||||| |||||||| || |||||| Sbjct: 181 atccagaaagagtccactctgcacctg 207 Score = 147 bits (74), Expect = 7e-32 Identities = 146/170 (85%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 837 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 896 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 897 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 956 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttg 409 |||| | || |||||||| || || ||||| || || || |||||||||| Sbjct: 957 gcagaggctgatctttgccgggaaacagctggaagatgggcgcacccttg 1006 Score = 99.6 bits (50), Expect = 1e-17 Identities = 156/190 (82%), Gaps = 2/190 (1%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||||||||| |||||||||||||| || || |||||||| ||||||| ||| | Sbjct: 1 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 60 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 ||||||||||| |||||||||| |||||| || || || || ||||| ||||| |||||| Sbjct: 61 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 120 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||| || || || |||| |||| || ||||| || |||||||| ||||| ||| ||||| Sbjct: 121 cagagg-ctgatctttgccggg-aaacagctggaagatggccgcaccctgtctgactaca 178 Query: 649 acatccagaa 658 |||||||||| Sbjct: 179 acatccagaa 188
>ref|XM_873963.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 5 (UBC), mRNA Length = 1883 Score = 359 bits (181), Expect = 1e-95 Identities = 362/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 520 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 579 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 580 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 639 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 640 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 699 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 700 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 759 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 760 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 819 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 820 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 878 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 879 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaag 937 Query: 660 g 660 | Sbjct: 938 g 938 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 748 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 807 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 808 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 867 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 868 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 927 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 928 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 987 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 988 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1047 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1048 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1106 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1107 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1164 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 976 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1035 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1036 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1095 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1096 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1155 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1156 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1215 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1216 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1275 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1276 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1334 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1335 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1392 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 292 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 351 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 352 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 411 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 412 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 471 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 472 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 531 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 532 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 591 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 592 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 650 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 651 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 708 Score = 335 bits (169), Expect = 1e-88 Identities = 359/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1433 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1492 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1493 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1552 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1553 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1612 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1613 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1672 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1673 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1732 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1733 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1791 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 1792 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaag 1850 Query: 660 g 660 | Sbjct: 1851 g 1851 Score = 325 bits (164), Expect = 1e-85 Identities = 358/420 (85%), Gaps = 3/420 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1204 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1263 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1264 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1323 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1324 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1383 Query: 420 catccag-aaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 ||||||| ||| ||||||| || |||||||| ||||||||||| ||||| |||||||||| Sbjct: 1384 catccagaaagaagtccactctgcacctggtcctccgcctcagaggtgggatgcagatct 1443 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 ||||||||||| | ||||||||||||||||| ||||||| ||| | |||||||||| Sbjct: 1444 tcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcg 1503 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 | ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || Sbjct: 1504 agaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctg 1562 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1563 atctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1621 Score = 313 bits (158), Expect = 5e-82 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || || |||||||| || ||||| ||| || | Sbjct: 65 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 124 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| |||||||||| |||||| || || || || ||||||||||| |||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 245 atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc 304 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 305 gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 364 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || || Sbjct: 365 aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgat 423 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 424 ctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 480 Score = 210 bits (106), Expect = 5e-51 Identities = 193/222 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1661 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1720 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1721 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1780 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1781 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1840 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcag 461 |||||||||||||||||| || |||||||| ||||||||||| Sbjct: 1841 catccagaaggagtccactctgcacctggtcctccgcctcag 1882
>ref|XM_864638.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 3 (UBC), mRNA Length = 2872 Score = 359 bits (181), Expect = 1e-95 Identities = 362/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 520 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 579 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 580 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 639 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 640 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 699 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 700 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 759 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 760 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 819 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 820 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 878 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 879 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaag 937 Query: 660 g 660 | Sbjct: 938 g 938 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1888 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1947 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1948 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2007 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 2008 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 2067 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2068 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2127 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2128 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 2187 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2188 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2246 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2247 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2304 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 748 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 807 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 808 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 867 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 868 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 927 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 928 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 987 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 988 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1047 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1048 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1106 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1107 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1164 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 2344 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 2403 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2404 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2463 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2464 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2523 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2524 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2583 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2584 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 2643 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2644 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2702 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2703 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2760 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 2116 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 2175 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2176 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2235 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2236 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2295 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2296 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2355 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 2356 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 2415 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2416 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2474 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2475 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2532 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1204 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1263 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1264 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1323 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1324 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1383 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| |||| ||||||||||| Sbjct: 1384 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgtgatgcagatctt 1443 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1444 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1503 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1504 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1562 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1563 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1620 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 976 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1035 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1036 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1095 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1096 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1155 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1156 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1215 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1216 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1275 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1276 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1334 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1335 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1392 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 292 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 351 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 352 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 411 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 412 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 471 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 472 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 531 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 532 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 591 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 592 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 650 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 651 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 708 Score = 339 bits (171), Expect = 9e-90 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1432 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1491 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1492 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1551 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1552 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1611 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1612 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1671 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1672 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1731 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1732 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1790 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1791 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1848 Score = 335 bits (169), Expect = 1e-88 Identities = 359/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1660 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1719 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1720 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1779 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1780 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1839 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1840 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1899 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1900 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1959 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1960 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2018 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 2019 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaag 2077 Query: 660 g 660 | Sbjct: 2078 g 2078 Score = 313 bits (158), Expect = 5e-82 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || || |||||||| || ||||| ||| || | Sbjct: 65 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 124 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| |||||||||| |||||| || || || || ||||||||||| |||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 245 atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc 304 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 305 gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 364 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || || Sbjct: 365 aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgat 423 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 424 ctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 480 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 2572 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 2631 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2632 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2691 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2692 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2751 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2752 catccagaaagagtccac 2769
>gb|AF285162.1| Mus musculus cell-line C3H/RV polyubiquitin C (Ubc) gene, complete cds Length = 4212 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 3067 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 3126 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 3127 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 3186 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 3187 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 3246 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 3247 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 3306 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 3307 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 3366 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 3367 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 3425 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 3426 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 3482 Score = 353 bits (178), Expect = 6e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 2154 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 2213 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 2214 tgacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 2273 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 2274 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 2333 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 2334 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtgggatgcagatctt 2393 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||| ||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 2394 tgtgaaaaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 2453 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 2454 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 2512 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 2513 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 2570 Score = 351 bits (177), Expect = 2e-93 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||| ||||||||||| ||||| ||| || | Sbjct: 3523 atgcagatctttgtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccagt 3582 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 3583 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 3642 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 3643 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 3702 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 3703 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 3762 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 3763 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 3822 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 3823 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 3881 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 3882 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 3938 Score = 351 bits (177), Expect = 2e-93 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 3295 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 3354 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 3355 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 3414 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 3415 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 3474 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 3475 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 3534 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || ||||| |||||||||||||||| ||| | |||||||| || Sbjct: 3535 gtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccagtgacaccattgag 3594 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 3595 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 3653 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 3654 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 3710 Score = 351 bits (177), Expect = 2e-93 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||| ||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 2839 atgcagatctttgtgaaaaccctgacaggcaagaccatcaccctggaggtcgagcccagt 2898 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 2899 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 2958 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 2959 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 3018 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 3019 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 3078 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 3079 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 3138 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 3139 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 3197 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 3198 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 3254 Score = 351 bits (177), Expect = 2e-93 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1927 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1986 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1987 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 2046 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || | ||||||||||| | ||||||||| Sbjct: 2047 cagaggctgatctttgcaggcaagcagctggaaggtggccgcaccctgtcagactacaac 2106 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 2107 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtgggatgcagatcttt 2166 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 2167 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 2226 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 2227 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 2285 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 2286 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 2342 Score = 351 bits (177), Expect = 2e-93 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1699 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1758 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1759 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1818 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1819 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1878 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1879 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 1938 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1939 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgag 1998 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1999 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 2057 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || | |||||| ||||| | | ||||||||||||||| Sbjct: 2058 ctttg-caggcaagcagctggaaggtggccgcaccctgtcagactacaacatccagaa 2114 Score = 345 bits (174), Expect = 1e-91 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||| ||||| || ||||||||||||||||| ||||| ||| || Sbjct: 2382 gatgcagatctttgtgaaaaccctgacaggcaagaccatcaccctggaggtcgagcccag 2441 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 2442 tgacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 2501 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 2502 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 2561 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 2562 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 2621 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 2622 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 2681 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| |||| ||||||||| || || | Sbjct: 2682 gaatgtcaaggcaaagatccaggacaaggagggcatctcccctgaccagcagagg-ctga 2740 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 2741 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 2798 Score = 343 bits (173), Expect = 6e-91 Identities = 358/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 2611 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 2670 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| |||||||||||||||||||||||| |||| |||||| Sbjct: 2671 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatctcccctgaccag 2730 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 2731 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2790 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 2791 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 2850 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||| ||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 2851 gtgaaaaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 2910 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 2911 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 2969 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 2970 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 3026 Score = 337 bits (170), Expect = 4e-89 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||| ||| | || || |||||||||||||| ||||| ||| || Sbjct: 1470 gatgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccag 1529 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1530 tgacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 1589 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 1590 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 1649 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1650 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 1709 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1710 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 1769 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 1770 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 1828 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1829 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1886 Score = 283 bits (143), Expect = 5e-73 Identities = 242/275 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 3751 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 3810 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 3811 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 3870 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 3871 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 3930 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 3931 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 3990 Query: 481 gtgaagaccctcaccggcaagaccatcaccctgga 515 ||||||||||| || ||||||||||||||| |||| Sbjct: 3991 gtgaagaccctgacaggcaagaccatcaccttgga 4025
>gb|AF285161.1| Mus musculus cell-line C3H/He polyubiquitin C (Ubc) gene, complete cds Length = 3756 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 3067 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtggagcccagt 3126 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 3127 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 3186 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 3187 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 3246 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 3247 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtgggatgcagatcttt 3306 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 3307 gtgaagaccctgacaggcaagaccatcaccctggaggtggagcccagtgacaccattgag 3366 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 3367 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 3425 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 3426 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 3482 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 2839 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 2898 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 2899 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 2958 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 2959 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 3018 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 3019 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 3078 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 3079 gtgaagaccctgacaggcaagaccatcaccctggaggtggagcccagtgacaccattgag 3138 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 3139 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 3197 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 3198 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 3254 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 2611 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtggagcccagt 2670 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 2671 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 2730 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 2731 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2790 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 2791 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 2850 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 2851 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgag 2910 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 2911 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 2969 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 2970 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 3026 Score = 351 bits (177), Expect = 2e-93 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||| ||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 2383 atgcagatctttgtgaaaaccctgacaggcaagaccatcaccctggaggtcgagcccagt 2442 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 2443 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 2502 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 2503 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2562 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 2563 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 2622 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 2623 gtgaagaccctgacaggcaagaccatcaccctggaggtggagcccagtgacaccattgag 2682 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 2683 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 2741 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 2742 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 2798 Score = 351 bits (177), Expect = 2e-93 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1927 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1986 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1987 gacactatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 2046 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 2047 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2106 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 2107 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 2166 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 2167 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 2226 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| |||| ||||||||| || || || Sbjct: 2227 aatgtcaaggcaaagatccaggacaaggagggcatctcccctgaccagcagagg-ctgat 2285 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 2286 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 2342 Score = 351 bits (177), Expect = 2e-93 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1699 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1758 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1759 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1818 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1819 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1878 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1879 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 1938 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | ||||| || || Sbjct: 1939 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacactatagag 1998 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1999 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 2057 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 2058 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 2114 Score = 343 bits (173), Expect = 6e-91 Identities = 358/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 2155 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 2214 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| |||||||||||||||||||||||| |||| |||||| Sbjct: 2215 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatctcccctgaccag 2274 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 2275 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2334 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 2335 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 2394 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||| ||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 2395 gtgaaaaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 2454 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 2455 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 2513 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 2514 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 2570 Score = 337 bits (170), Expect = 4e-89 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||| ||| | || || |||||||||||||| ||||| ||| || Sbjct: 1470 gatgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccag 1529 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1530 tgacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 1589 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 1590 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 1649 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1650 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 1709 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1710 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattga 1769 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 1770 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 1828 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1829 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1886 Score = 285 bits (144), Expect = 1e-73 Identities = 243/276 (88%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 3294 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtggagcccag 3353 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 3354 tgacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 3413 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 3414 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 3473 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 3474 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 3533 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctgga 515 ||||||||||| || ||||||||||||||| |||| Sbjct: 3534 tgtgaagaccctgacaggcaagaccatcaccttgga 3569
>ref|XM_001001988.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 4 (Ubc), mRNA Length = 1250 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 550 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 609 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 610 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 669 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 670 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 729 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 730 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 789 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 790 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 849 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 850 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 908 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 909 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 965 Score = 337 bits (170), Expect = 4e-89 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||| ||| | || || |||||||||||||| ||||| ||| || Sbjct: 321 gatgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccag 380 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 381 tgacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 440 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 441 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 500 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 501 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 560 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 561 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 620 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 621 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 679 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 680 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 737 Score = 283 bits (143), Expect = 5e-73 Identities = 242/275 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 778 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 837 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 838 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 897 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 898 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 957 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 958 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 1017 Query: 481 gtgaagaccctcaccggcaagaccatcaccctgga 515 ||||||||||| || ||||||||||||||| |||| Sbjct: 1018 gtgaagaccctgacaggcaagaccatcaccttgga 1052
>ref|XM_001002029.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 18 (Ubc), mRNA Length = 2266 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1566 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1625 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1626 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1685 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1686 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1745 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1746 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 1805 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1806 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 1865 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1866 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1924 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1925 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1981 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1338 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1397 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1398 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1457 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1458 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1517 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1518 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 1577 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1578 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 1637 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1638 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1696 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1697 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1753 Score = 351 bits (177), Expect = 2e-93 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1110 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1169 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| || ||| Sbjct: 1170 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgatcag 1229 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1230 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1289 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1290 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 1349 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1350 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 1409 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1410 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1468 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1469 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1525 Score = 351 bits (177), Expect = 2e-93 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 882 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 941 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 942 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1001 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1002 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1061 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1062 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 1121 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1122 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 1181 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| || |||||| || || || Sbjct: 1182 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgatcagcagagg-ctgat 1240 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1241 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1297 Score = 337 bits (170), Expect = 4e-89 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||| ||| | || || |||||||||||||| ||||| ||| || Sbjct: 653 gatgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccag 712 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 713 tgacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 772 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 773 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 832 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 833 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 892 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 893 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 952 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 953 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 1011 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1012 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1069 Score = 283 bits (143), Expect = 5e-73 Identities = 242/275 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1794 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1853 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1854 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1913 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1914 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1973 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1974 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 2033 Query: 481 gtgaagaccctcaccggcaagaccatcaccctgga 515 ||||||||||| || ||||||||||||||| |||| Sbjct: 2034 gtgaagaccctgacaggcaagaccatcaccttgga 2068
>ref|XM_001002019.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 25 (Ubc), mRNA Length = 1676 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 976 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1035 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1036 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1095 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1096 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1155 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1156 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 1215 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1216 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 1275 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1276 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1334 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1335 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1391 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 748 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 807 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 808 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 867 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 868 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 927 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 928 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 987 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 988 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 1047 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1048 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1106 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1107 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1163 Score = 351 bits (177), Expect = 2e-93 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 520 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 579 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| || ||| Sbjct: 580 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgatcag 639 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 640 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 699 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 700 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 759 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 760 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 819 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 820 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 878 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 879 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 935 Score = 351 bits (177), Expect = 2e-93 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 292 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 351 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 352 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 411 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 412 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 471 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 472 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 531 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 532 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 591 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| || |||||| || || || Sbjct: 592 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgatcagcagagg-ctgat 650 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 651 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 707 Score = 337 bits (170), Expect = 4e-89 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||| ||| | || || |||||||||||||| ||||| ||| || Sbjct: 63 gatgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccag 122 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 123 tgacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 182 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 183 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 242 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 243 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 302 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 303 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 362 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 363 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 421 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 422 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 479 Score = 283 bits (143), Expect = 5e-73 Identities = 242/275 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1204 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1263 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1264 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1323 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1324 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1383 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1384 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 1443 Query: 481 gtgaagaccctcaccggcaagaccatcaccctgga 515 ||||||||||| || ||||||||||||||| |||| Sbjct: 1444 gtgaagaccctgacaggcaagaccatcaccttgga 1478
>ref|XM_001002053.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 22 (Ubc), mRNA Length = 1931 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1231 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1290 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1291 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1350 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1351 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1410 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1411 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 1470 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1471 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 1530 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1531 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1589 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1590 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1646 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1003 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1062 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1063 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1122 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1123 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1182 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1183 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 1242 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1243 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 1302 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1303 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1361 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1362 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1418 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 319 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 378 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 379 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 438 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 439 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 498 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 499 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 558 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 559 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 618 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 619 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 677 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 678 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 734 Score = 351 bits (177), Expect = 2e-93 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 775 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 834 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| || ||| Sbjct: 835 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgatcag 894 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 895 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 954 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 955 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 1014 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1015 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 1074 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1075 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1133 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1134 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1190 Score = 351 bits (177), Expect = 2e-93 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 547 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 606 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 607 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 666 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 667 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 726 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 727 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 786 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 787 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 846 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| || |||||| || || || Sbjct: 847 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgatcagcagagg-ctgat 905 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 906 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 962 Score = 337 bits (170), Expect = 4e-89 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||| ||| | || || |||||||||||||| ||||| ||| || Sbjct: 90 gatgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccag 149 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 150 tgacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 209 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 210 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 269 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 270 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 329 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 330 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 389 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 390 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 448 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 449 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 506 Score = 283 bits (143), Expect = 5e-73 Identities = 242/275 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1459 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1518 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1519 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1578 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1579 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1638 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1639 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 1698 Query: 481 gtgaagaccctcaccggcaagaccatcaccctgga 515 ||||||||||| || ||||||||||||||| |||| Sbjct: 1699 gtgaagaccctgacaggcaagaccatcaccttgga 1733
>ref|XM_001002045.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 29 (Ubc), mRNA Length = 2494 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1794 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1853 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1854 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1913 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1914 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1973 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1974 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 2033 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 2034 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 2093 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 2094 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 2152 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 2153 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 2209 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1566 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1625 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1626 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1685 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1686 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1745 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1746 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 1805 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1806 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 1865 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1866 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1924 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1925 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1981 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 882 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 941 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 942 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1001 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1002 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1061 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1062 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 1121 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1122 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 1181 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1182 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1240 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1241 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1297 Score = 351 bits (177), Expect = 2e-93 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1338 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1397 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| || ||| Sbjct: 1398 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgatcag 1457 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1458 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1517 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1518 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 1577 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1578 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 1637 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1638 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1696 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1697 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1753 Score = 351 bits (177), Expect = 2e-93 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1110 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1169 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1170 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1229 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1230 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1289 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1290 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 1349 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1350 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 1409 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| || |||||| || || || Sbjct: 1410 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgatcagcagagg-ctgat 1468 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1469 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1525 Score = 337 bits (170), Expect = 4e-89 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||| ||| | || || |||||||||||||| ||||| ||| || Sbjct: 653 gatgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccag 712 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 713 tgacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 772 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 773 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 832 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 833 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 892 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 893 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 952 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 953 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 1011 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1012 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1069 Score = 283 bits (143), Expect = 5e-73 Identities = 242/275 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 2022 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 2081 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 2082 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 2141 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 2142 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2201 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 2202 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 2261 Query: 481 gtgaagaccctcaccggcaagaccatcaccctgga 515 ||||||||||| || ||||||||||||||| |||| Sbjct: 2262 gtgaagaccctgacaggcaagaccatcaccttgga 2296
>gb|BC036303.1| Mus musculus ubiquitin C, mRNA (cDNA clone IMAGE:2645223), complete cds Length = 1193 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 262 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 321 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 322 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 381 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 382 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 441 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 442 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 501 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 502 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgag 561 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 562 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 620 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 621 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 677 Score = 351 bits (177), Expect = 2e-93 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 490 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 549 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 550 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 609 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 610 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 669 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 670 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 729 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||| ||||||||||||| ||| | |||||||| || Sbjct: 730 gtgaagaccctgacaggcaagactatcaccctggaggtcgagcccagtgacaccattgag 789 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 790 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 848 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 849 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 905 Score = 337 bits (170), Expect = 4e-89 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||| ||| | || || |||||||||||||| ||||| ||| || Sbjct: 33 gatgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccag 92 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 93 tgacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 152 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 153 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 212 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 213 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 272 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 273 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattga 332 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 333 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 391 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 392 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 449 Score = 276 bits (139), Expect = 1e-70 Identities = 241/275 (87%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || |||||||| |||||||| ||||| ||| || | Sbjct: 718 atgcagatctttgtgaagaccctgacaggcaagactatcaccctggaggtcgagcccagt 777 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 778 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 837 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 838 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 897 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 898 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 957 Query: 481 gtgaagaccctcaccggcaagaccatcaccctgga 515 ||||||||||| || ||||||||||||||| |||| Sbjct: 958 gtgaagaccctgacaggcaagaccatcaccttgga 992
>dbj|AK168448.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920021C12 product:ubiquitin C, full insert sequence Length = 980 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 291 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 350 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 351 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 410 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 411 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 470 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 471 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtgggatgcagatcttt 530 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 531 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 590 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 591 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 649 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 650 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 706 Score = 337 bits (170), Expect = 4e-89 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||| ||| | || || |||||||||||||| ||||| ||| || Sbjct: 62 gatgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccag 121 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 122 tgacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 181 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 182 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 241 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 242 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 301 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 302 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 361 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 362 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 420 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 421 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 478 Score = 293 bits (148), Expect = 5e-76 Identities = 244/276 (88%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 518 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 577 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 578 tgacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 637 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 638 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 697 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 698 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 757 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctgga 515 ||||||||||| || |||||||||||||||||||| Sbjct: 758 tgtgaagaccctgacaggcaagaccatcaccctgga 793
>dbj|AK010964.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510015A11 product:POLYUBIQUITIN (UBIQUITIN B) homolog [Mus musculus], full insert sequence Length = 1208 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 291 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 350 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 351 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 410 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 411 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 470 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 471 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 530 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 531 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 590 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 591 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 649 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 650 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 706 Score = 337 bits (170), Expect = 4e-89 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||| ||| | || || |||||||||||||| ||||| ||| || Sbjct: 62 gatgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccag 121 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 122 tgacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 181 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 182 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 241 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 242 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 301 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 302 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 361 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 362 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 420 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 421 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 478 Score = 335 bits (169), Expect = 1e-88 Identities = 357/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 519 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 578 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 579 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 638 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 639 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 698 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| ||| | || || |||||||| ||||| ||||||||||| Sbjct: 699 atccagaaagagtccaccctgcacttagtccttcgcctcagaggtgggatgcagatcttt 758 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || ||||| |||||||||||||||| ||| | |||||||| || Sbjct: 759 gtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccagtgacaccattgag 818 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 819 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 877 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 878 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 934 Score = 285 bits (144), Expect = 1e-73 Identities = 243/276 (88%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||| ||||||||||| ||||| ||| || Sbjct: 746 gatgcagatctttgtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccag 805 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 806 tgacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 865 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 866 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 925 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 926 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 985 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctgga 515 ||||||||||| || |||||||||||||||||||| Sbjct: 986 tgtgaagaccctgacaggcaagaccatcaccctgga 1021
>dbj|AK012427.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700054O04 product:ubiquitin, beta-galactosidase related, full insert sequence Length = 1903 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 527 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 586 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 587 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 646 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 647 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 706 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 707 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 766 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 767 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 826 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 827 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 885 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 886 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 942 Score = 345 bits (174), Expect = 1e-91 Identities = 360/419 (85%), Gaps = 3/419 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 755 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 814 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 815 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 874 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 875 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 934 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 935 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 994 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 995 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 1054 Query: 541 aacgtcaaggcgaagatcca-ggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| |||||||| ||||||||||||||| ||||| ||||||||| || || | Sbjct: 1055 aatgtcaaggcaaagatccagggacaaggagggcatcccccctgaccagcagagg-ctga 1113 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1114 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1171 Score = 339 bits (171), Expect = 9e-90 Identities = 357/416 (85%), Gaps = 3/416 (0%) Strand = Plus / Plus Query: 244 cagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctctgac 303 |||||||||||||||||||| || ||||||||||||||||| ||||| ||| || |||| Sbjct: 301 cagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgac 360 Query: 304 acgatcgacaacgtcaaggcgaagatccaggacaaggaggg-catccccccggaccagca 362 || || || || |||||||| |||||||||||||||||||| ||||||||| |||||||| Sbjct: 361 accatagagaatgtcaaggcaaagatccaggacaaggaggggcatcccccctgaccagca 420 Query: 363 gcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaacat 422 | | || |||||||| ||||||||||| || || ||||||||||| | ||||||||||| Sbjct: 421 gaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaacat 480 Query: 423 ccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttcgt 482 |||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| || Sbjct: 481 ccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctttgt 540 Query: 483 gaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgacaa 542 ||||||||| || |||||||||||||||||||||| ||| | |||||||| || || Sbjct: 541 gaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagagaa 600 Query: 543 cgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcatnt 602 |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || | Sbjct: 601 tgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgatct 659 Query: 603 ttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 ||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 660 ttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 714 Score = 331 bits (167), Expect = 2e-87 Identities = 360/420 (85%), Gaps = 4/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1213 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1272 Query: 301 gacacgatcgacaac-gtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1273 gacaccatagagaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 1332 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 1333 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 1392 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatg-cagatct 478 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||| ||||||| Sbjct: 1393 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgccagatct 1452 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | ||||||||||| || |||||||||||||||||||||| ||| | |||||||| | Sbjct: 1453 ttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatag 1512 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 | || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || Sbjct: 1513 agaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctg 1571 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1572 atctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1630 Score = 331 bits (167), Expect = 2e-87 Identities = 360/420 (85%), Gaps = 4/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 69 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 128 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 188 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 189 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 248 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatg-cagatctt 479 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||| |||||||| Sbjct: 249 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgccagatctt 308 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 309 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 368 Query: 540 caacgtcaaggcgaagatccaggacaagga-gggcattcccccggaccagcagcggcctc 598 || |||||||| ||||||||||||||||| |||||| ||||| ||||||||| || || Sbjct: 369 gaatgtcaaggcaaagatccaggacaaggaggggcatcccccctgaccagcagagg-ctg 427 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 428 atctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 486 Score = 317 bits (160), Expect = 3e-83 Identities = 360/421 (85%), Gaps = 5/421 (1%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 983 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1042 Query: 301 gacacgatcgacaacgtcaaggcgaagatccagg-acaaggagggcatccccccggacca 359 ||||| || || || |||||||| |||||||||| ||||||||||||||||||| ||||| Sbjct: 1043 gacaccatagagaatgtcaaggcaaagatccagggacaaggagggcatcccccctgacca 1102 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 1103 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 1162 Query: 420 catccagaag-gagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 ||||||||| ||||||||||| |||||||| || |||||||| ||||| |||||||||| Sbjct: 1163 catccagaaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatct 1222 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | ||||||||||| || |||||||||||||||||||||| ||| | |||||||| | Sbjct: 1223 ttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatag 1282 Query: 539 a-caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcct 597 | || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || Sbjct: 1283 agaaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ct 1341 Query: 598 catntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccaga 657 || |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||| Sbjct: 1342 gatctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccaga 1400 Query: 658 a 658 | Sbjct: 1401 a 1401 Score = 285 bits (144), Expect = 1e-73 Identities = 240/272 (88%) Strand = Plus / Plus Query: 244 cagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctctgac 303 |||||||||||||||||||| || ||||||||||||||||| ||||| ||| || |||| Sbjct: 1446 cagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgac 1505 Query: 304 acgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccagcag 363 || || || || |||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 1506 accatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcag 1565 Query: 364 cgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaacatc 423 | || |||||||| ||||||||||| || || ||||||||||| | |||||||||||| Sbjct: 1566 aggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaacatc 1625 Query: 424 cagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttcgtg 483 ||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| ||| Sbjct: 1626 cagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctttgtg 1685 Query: 484 aagaccctcaccggcaagaccatcaccctgga 515 |||||||| || |||||||||||||||||||| Sbjct: 1686 aagaccctgacaggcaagaccatcaccctgga 1717 Score = 202 bits (102), Expect = 1e-48 Identities = 212/247 (85%), Gaps = 2/247 (0%) Strand = Plus / Plus Query: 412 gactacaacatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatg 471 ||||||||||||||||| ||||||||||| |||||||| || |||||||| ||||| ||| Sbjct: 12 gactacaacatccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatg 71 Query: 472 cagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggac 531 |||||||| ||||||||||| || |||||||||||||||||||||| ||| | ||| Sbjct: 72 cagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgac 131 Query: 532 accatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 ||||| || || |||||||| ||||||||||||||||||||||| ||||| ||||||||| Sbjct: 132 accatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcag 191 Query: 592 cggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaaca 651 || || || |||| | ||||||||||| || |||||||| ||||| | | |||||||| Sbjct: 192 agg-ctgatctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaaca 249 Query: 652 tccagaa 658 ||||||| Sbjct: 250 tccagaa 256 Score = 157 bits (79), Expect = 7e-35 Identities = 192/227 (84%), Gaps = 2/227 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| || || ||| || | Sbjct: 1671 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggacgtcgagcccagt 1730 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 | || | | | || |||||||| |||||||||||||||||||||||||||| | ||||| Sbjct: 1731 gttaccaccaagaaggtcaaggcaaagatccaggacaaggagggcatccccctg-accag 1789 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1790 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1849 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||||||| | || ||||| || |||||||| ||||| Sbjct: 1850 atccagaaagagtccaccgtgca-ctggtccttcgcctcagaggtgg 1895 Score = 83.8 bits (42), Expect = 9e-13 Identities = 99/115 (86%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 544 gtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcatntt 603 |||||||| |||||||||||||||||||||| |||||| ||||||||| || || || || Sbjct: 1746 gtcaaggcaaagatccaggacaaggagggca-tccccctgaccagcagagg-ctgatctt 1803 Query: 604 tgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1804 tg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1857
>gb|BC094012.1| Mus musculus ubiquitin C, mRNA (cDNA clone IMAGE:5037932), complete cds Length = 1209 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 278 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 337 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 338 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 397 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 398 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 457 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 458 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 517 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 518 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgag 577 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 578 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 636 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 637 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 693 Score = 351 bits (177), Expect = 2e-93 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 506 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 565 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 566 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 625 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 626 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 685 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 686 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 745 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||| ||||||||||||| ||| | |||||||| || Sbjct: 746 gtgaagaccctgacaggcaagactatcaccctggaggtcgagcccagtgacaccattgag 805 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 806 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 864 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 865 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 921 Score = 337 bits (170), Expect = 4e-89 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||| ||| | || || |||||||||||||| ||||| ||| || Sbjct: 49 gatgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccag 108 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 109 tgacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 168 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 169 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 228 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 229 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 288 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 289 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattga 348 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 349 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 407 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 408 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 465 Score = 276 bits (139), Expect = 1e-70 Identities = 241/275 (87%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || |||||||| |||||||| ||||| ||| || | Sbjct: 734 atgcagatctttgtgaagaccctgacaggcaagactatcaccctggaggtcgagcccagt 793 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 794 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 853 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 854 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 913 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 914 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 973 Query: 481 gtgaagaccctcaccggcaagaccatcaccctgga 515 ||||||||||| || ||||||||||||||| |||| Sbjct: 974 gtgaagaccctgacaggcaagaccatcaccttgga 1008
>gb|AY099135.1| Cercomonas edax isolate pub7 polyubiquitin gene, partial cds Length = 532 Score = 359 bits (181), Expect = 1e-95 Identities = 358/416 (86%), Gaps = 8/416 (1%) Strand = Plus / Plus Query: 261 cctcaccggcaagaccatcacccttgaggttgagtcctctgacacgatcgacaacgtcaa 320 |||||||||||||||||||||||| || || ||| ||||||||||||||| ||||| || Sbjct: 1 cctcaccggcaagaccatcaccctggacgtggagagctctgacacgatcgagaacgtgaa 60 Query: 321 ggcgaagatccaggacaaggagggcatccccccggaccagcagcgcctcatctttgctgg 380 | ||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 61 gcagaagatccaggacaaggagggcatccccccggatcagcagcgcctcatcttcgccgg 120 Query: 381 caagcagcttgaggacggccgcacccttgctgactacaacatccagaaggagtccaccct 440 ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 121 caagcagctcgaggacggccgcaccctggctgactacaacatccagaaggagtcgaccct 180 Query: 441 ccacctggtgctccgcctcagggg------tggtatgcagatcttcgtgaagaccctcac 494 ||||| ||||| || || | || ||| |||||||||||||| ||||||||||| Sbjct: 181 tcaccttgtgctgcgtctgcgcggtggctctggcatgcagatcttcgtcaagaccctcac 240 Query: 495 cggcaagaccatcaccctggagggtgagtcttcggacaccatcgacaacgtcaaggcgaa 554 ||||||||||||||||||||| | ||| || ||||| ||||| ||||| ||| ||| Sbjct: 241 cggcaagaccatcaccctggacgtggagagctctgacacgatcgagaacgtgaagcagaa 300 Query: 555 gatccaggacaaggagggcattcccccggaccagcagcggcctcatntttgncgggcaag 614 ||||||||||||||||||||| |||||||| || |||| ||||||| || | | |||||| Sbjct: 301 gatccaggacaaggagggcatccccccggatcaacagc-gcctcatcttcgcc-ggcaag 358 Query: 615 cagcttgangatggccgaacccttgctgnctacaacatccagaaggggtcacccct 670 ||||| || || ||||| ||||| |||| ||||||||||||||||| |||| |||| Sbjct: 359 cagctcgaggacggccgcaccctggctgactacaacatccagaaggagtcaaccct 414 Score = 297 bits (150), Expect = 3e-77 Identities = 248/281 (88%), Gaps = 6/281 (2%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||||||||||||||||||||| || || ||| |||| Sbjct: 215 atgcagatcttcgtcaagaccctcaccggcaagaccatcaccctggacgtggagagctct 274 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||| || Sbjct: 275 gacacgatcgagaacgtgaagcagaagatccaggacaaggagggcatccccccggatcaa 334 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 335 cagcgcctcatcttcgccggcaagcagctcgaggacggccgcaccctggctgactacaac 394 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcagggg------tggtatgcag 474 |||||||||||||| ||||| ||||| ||||| || || | || ||| |||||| Sbjct: 395 atccagaaggagtcaacccttcaccttgtgctgcgtctgcgcggtggctctggcatgcag 454 Query: 475 atcttcgtgaagaccctcaccggcaagaccatcaccctgga 515 |||||||| |||||||||||||||||||||||||||||||| Sbjct: 455 atcttcgtcaagaccctcaccggcaagaccatcaccctgga 495 Score = 83.8 bits (42), Expect = 9e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||||||||||||||||||||| || || ||| |||| Sbjct: 449 atgcagatcttcgtcaagaccctcaccggcaagaccatcaccctggacgtggagagctct 508 Query: 301 gacacgatcg 310 |||||||||| Sbjct: 509 gacacgatcg 518
>ref|NM_019639.3| Mus musculus ubiquitin C (Ubc), mRNA Length = 2779 Score = 359 bits (181), Expect = 1e-95 Identities = 360/418 (86%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1634 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1693 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1694 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1753 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1754 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1813 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1814 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 1873 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1874 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 1933 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1934 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1992 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1993 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 2049 Score = 353 bits (178), Expect = 6e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 721 gatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccag 780 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 781 tgacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 840 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 841 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 900 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 901 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtgggatgcagatctt 960 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||| ||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 961 tgtgaaaaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 1020 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 1021 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 1079 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1080 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1137 Score = 351 bits (177), Expect = 2e-93 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||| ||||||||||| ||||| ||| || | Sbjct: 2090 atgcagatctttgtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccagt 2149 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 2150 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 2209 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 2210 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2269 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 2270 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 2329 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 2330 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 2389 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 2390 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 2448 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 2449 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 2505 Score = 351 bits (177), Expect = 2e-93 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1862 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1921 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1922 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1981 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1982 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2041 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 2042 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 2101 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || ||||| |||||||||||||||| ||| | |||||||| || Sbjct: 2102 gtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccagtgacaccattgag 2161 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 2162 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 2220 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 2221 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 2277 Score = 351 bits (177), Expect = 2e-93 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||| ||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1406 atgcagatctttgtgaaaaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1465 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1466 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1525 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1526 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1585 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1586 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 1645 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1646 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 1705 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1706 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1764 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1765 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1821 Score = 351 bits (177), Expect = 2e-93 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 494 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 553 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 554 gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 613 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || | ||||||||||| | ||||||||| Sbjct: 614 cagaggctgatctttgcaggcaagcagctggaaggtggccgcaccctgtcagactacaac 673 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 674 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtgggatgcagatcttt 733 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 734 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 793 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 794 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 852 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 853 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 909 Score = 351 bits (177), Expect = 2e-93 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 266 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 325 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 326 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 385 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 386 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 445 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 446 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 505 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 506 gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgag 565 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 566 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 624 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || | |||||| ||||| | | ||||||||||||||| Sbjct: 625 ctttg-caggcaagcagctggaaggtggccgcaccctgtcagactacaacatccagaa 681 Score = 345 bits (174), Expect = 1e-91 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||| ||||| || ||||||||||||||||| ||||| ||| || Sbjct: 949 gatgcagatctttgtgaaaaccctgacaggcaagaccatcaccctggaggtcgagcccag 1008 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1009 tgacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 1068 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 1069 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 1128 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1129 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 1188 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1189 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 1248 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| |||| ||||||||| || || | Sbjct: 1249 gaatgtcaaggcaaagatccaggacaaggagggcatctcccctgaccagcagagg-ctga 1307 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1308 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1365 Score = 343 bits (173), Expect = 6e-91 Identities = 358/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 1178 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 1237 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| |||||||||||||||||||||||| |||| |||||| Sbjct: 1238 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatctcccctgaccag 1297 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1298 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1357 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1358 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 1417 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||| ||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 1418 gtgaaaaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag 1477 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 1478 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 1536 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1537 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1593 Score = 337 bits (170), Expect = 4e-89 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||| ||| | || || |||||||||||||| ||||| ||| || Sbjct: 37 gatgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccag 96 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 97 tgacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 156 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 157 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 216 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 217 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 276 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 277 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 336 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 337 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 395 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 396 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 453 Score = 283 bits (143), Expect = 5e-73 Identities = 242/275 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 2318 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 2377 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 2378 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 2437 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 2438 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 2497 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 2498 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 2557 Query: 481 gtgaagaccctcaccggcaagaccatcaccctgga 515 ||||||||||| || ||||||||||||||| |||| Sbjct: 2558 gtgaagaccctgacaggcaagaccatcaccttgga 2592
>gb|L13783.1|BVDP125A Bovine viral diarrhea virus p125 protein gene, partial cds Length = 3163 Score = 359 bits (181), Expect = 1e-95 Identities = 362/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1038 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1097 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1098 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1157 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1158 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1217 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1218 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1277 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1278 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1337 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1338 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1396 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 1397 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaag 1455 Query: 660 g 660 | Sbjct: 1456 g 1456 Score = 222 bits (112), Expect = 1e-54 Identities = 199/228 (87%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1266 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1325 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1326 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1385 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1386 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1445 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||||||||||||| || |||||||| ||||||||||| ||||| Sbjct: 1446 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgg 1493 Score = 184 bits (93), Expect = 3e-43 Identities = 196/229 (85%), Gaps = 2/229 (0%) Strand = Plus / Plus Query: 430 gagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttcgtgaagacc 489 |||||||| || |||||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 1000 gagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttcgtgaagacc 1059 Query: 490 ctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgacaacgtcaag 549 | ||||||||||||||||||||||||| ||| | ||||||||||| ||||||||| Sbjct: 1060 ttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaag 1119 Query: 550 gcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcatntttgncgg 609 || |||||||| ||||| |||||||| ||||| ||||||||| || || || |||| ||| Sbjct: 1120 gccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgatctttgccgg 1178 Query: 610 gcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1179 g-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1226
>emb|X87156.1|APOLYUBIQ Acanthamoeba sp. 4b3 polyubiquitin gene Length = 2388 Score = 357 bits (180), Expect = 4e-95 Identities = 361/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| ||||| ||||||||||| |||||||||||||||||||| ||||| ||||| Sbjct: 1874 atgcaaatcttcgtgaagaccctgaccggcaagaccatcaccctcgaggtcgagtcgagc 1933 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || ||||| ||||| ||| |||||||||||||||||||||||||| || || ||| Sbjct: 1934 gataccatcgagaacgtgaagcaaaagatccaggacaaggagggcatccctcccgatcag 1993 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| || || |||||||| ||||||||||||||||| || ||||||||| Sbjct: 1994 cagcgtctcatcttcgccggtaagcagctcgaggacggccgcaccctcgccgactacaac 2053 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || ||||| || | || ||||||||||||||| Sbjct: 2054 atccagaaggagtccaccctccacctcgtcctccgtcttcgtggcggtatgcagatcttc 2113 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||||||||| |||||||||||||| |||| ||||| || ||||| ||||| Sbjct: 2114 gtgaagaccctcaccggtaagaccatcaccctcgaggtcgagtcgtccgacacgatcgag 2173 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||| ||||||||||||||||||||| |||||||| |||||||||| ||||||| Sbjct: 2174 aacgtgaagcagaagatccaggacaaggagggtattccccccgaccagcagc-gcctcat 2232 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | || ||||||||||| || ||||| || || || | ||||||||||||||||| Sbjct: 2233 cttcgcc-ggtaagcagcttgaggacggccgcacgctcgccgactacaacatccagaagg 2291 Score = 303 bits (153), Expect = 5e-79 Identities = 246/277 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||||||||| |||||||||||||| ||||| ||||| || Sbjct: 2102 atgcagatcttcgtgaagaccctcaccggtaagaccatcaccctcgaggtcgagtcgtcc 2161 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||||||||| ||||| ||| ||||||||||||||||||||| || ||||| |||||| Sbjct: 2162 gacacgatcgagaacgtgaagcagaagatccaggacaaggagggtattccccccgaccag 2221 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| || || ||||||||||||||||||||||| || || ||||||||| Sbjct: 2222 cagcgcctcatcttcgccggtaagcagcttgaggacggccgcacgctcgccgactacaac 2281 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| || |||||||| || ||||| ||| | ||||| |||||||||||| Sbjct: 2282 atccagaaggagtcgactctccacctcgtcctccgtctccgtggtggcatgcagatcttc 2341 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagg 517 || ||||| || |||||||||||||||||||| |||| Sbjct: 2342 gtcaagacgctgaccggcaagaccatcaccctcgagg 2378 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggt 290 ||||||||||| || ||||| || |||||||||||||||||||| ||||| Sbjct: 2330 atgcagatcttcgtcaagacgctgaccggcaagaccatcaccctcgaggt 2379
>gb|AF502575.1| Musa acuminata ubiquitin (UBQ1) gene, complete cds Length = 1146 Score = 357 bits (180), Expect = 4e-95 Identities = 361/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| || || ||||| |||||||||||||||||||||||||| |||||| Sbjct: 1 atgcagatctttgttaaaactctcactggcaagaccatcacccttgaggttgaatcctct 60 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| |||||||| |||||||||||||| ||||| ||||| || |||||| Sbjct: 61 gacaccatcgacaatgtcaaggctaagatccaggacaaagagggaatccctccagaccag 120 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 || | || |||||||| || ||||| |||||||| ||||| |||||||| || |||||| Sbjct: 121 caaaggctgatctttgccggtaagcaacttgaggatggccggacccttgcggattacaac 180 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || ||||| | ||||| ||||| ||||| Sbjct: 181 atccagaaggagtccaccctccacctcgtacttcgccttcgtggtggcatgcaaatcttt 240 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||| | || ||||||||||||||||| |||| ||| ||| |||||||||||| Sbjct: 241 gtcaagaccttgactggcaagaccatcaccctcgaggtggagagttctgacaccatcgac 300 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||| ||||| |||||||||||||| || |||||||| || ||||| Sbjct: 301 aatgtcaaggctaagattcaggataaggagggcattcctccagaccagcaaagg-ctcat 359 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| |||||||| ||||| |||| |||||||||||||||| Sbjct: 360 ctttgcc-ggcaagcagcttgaggatggccgcaccctggctgattacaacatccagaagg 418 Score = 341 bits (172), Expect = 2e-90 Identities = 359/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| |||||||| |||||| | || ||||||||||||||||| ||||| ||| ||| Sbjct: 457 atgcaaatctttgtcaagaccttgactggcaagaccatcaccctcgaggtggagagttct 516 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| |||||||| ||||| ||||| ||||||||||| || ||||||||| Sbjct: 517 gacaccatcgacaatgtcaaggccaagattcaggataaggagggcattccaccggaccag 576 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| ||||||||||||||| | ||||| |||||| Sbjct: 577 cagaggctcatctttgccggcaagcagctggaggacggccgcaccttggctgattacaac 636 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || ||||||||| | ||||| ||||| |||||| Sbjct: 637 atccagaaggagtccaccctccaccttgtcctccgcctccgtggtggcatgcaaatcttc 696 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| | || || |||||||||||||| ||| ||| ||||||||||||||| Sbjct: 697 gtcaagactttgactgggaagaccatcacccttaaggtggagagctcggacaccatcgac 756 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||| |||||||||||||| ||||||||||||||||| || ||||| Sbjct: 757 aatgtaaaggccaagattcaggacaaggagggtattcccccggaccagcaaagg-ctcat 815 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| |||||||| ||||| || | |||||||| ||||||| Sbjct: 816 ctttgcc-ggcaagcagcttgaggatggccgcaccctggcagattacaacattcagaagg 874 Score = 341 bits (172), Expect = 2e-90 Identities = 359/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| |||||||| |||||| | || ||||||||||||||||| ||||| ||| ||| Sbjct: 229 atgcaaatctttgtcaagaccttgactggcaagaccatcaccctcgaggtggagagttct 288 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| |||||||| ||||| ||||| ||||||||||| || || |||||| Sbjct: 289 gacaccatcgacaatgtcaaggctaagattcaggataaggagggcattcctccagaccag 348 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 || | ||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||| Sbjct: 349 caaaggctcatctttgccggcaagcagcttgaggatggccgcaccctggctgattacaac 408 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| ||||| || || ||||||| ||||| ||||| Sbjct: 409 atccagaaggagtccaccctccaccttgtgcttcgacttcggggtggcatgcaaatcttt 468 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||| | || ||||||||||||||||| |||| ||| ||| |||||||||||| Sbjct: 469 gtcaagaccttgactggcaagaccatcaccctcgaggtggagagttctgacaccatcgac 528 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||| ||||| |||||||||||||| |||||||||||| || ||||| Sbjct: 529 aatgtcaaggccaagattcaggataaggagggcattccaccggaccagcagagg-ctcat 587 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || || ||||| ||| | |||| |||||||||||||||| Sbjct: 588 ctttgcc-ggcaagcagctggaggacggccgcaccttggctgattacaacatccagaagg 646 Score = 240 bits (121), Expect = 6e-60 Identities = 271/321 (84%) Strand = Plus / Plus Query: 271 aagaccatcacccttgaggttgagtcctctgacacgatcgacaacgtcaaggcgaagatc 330 ||||||||||||||| |||| ||| ||| ||||| |||||||| || ||||| ||||| Sbjct: 715 aagaccatcacccttaaggtggagagctcggacaccatcgacaatgtaaaggccaagatt 774 Query: 331 caggacaaggagggcatccccccggaccagcagcgcctcatctttgctggcaagcagctt 390 |||||||||||||| || |||||||||||||| | ||||||||||| |||||||||||| Sbjct: 775 caggacaaggagggtattcccccggaccagcaaaggctcatctttgccggcaagcagctt 834 Query: 391 gaggacggccgcacccttgctgactacaacatccagaaggagtccaccctccacctggtg 450 ||||| ||||||||||| || || |||||||| ||||||||||| ||||| ||||| ||| Sbjct: 835 gaggatggccgcaccctggcagattacaacattcagaaggagtctacccttcaccttgtg 894 Query: 451 ctccgcctcaggggtggtatgcagatcttcgtgaagaccctcaccggcaagaccatcacc 510 || | || |||||||| ||||||||||| || ||||| || || || |||||||| ||| Sbjct: 895 ctgagacttaggggtggcatgcagatctttgttaagacgcttacagggaagaccattacc 954 Query: 511 ctggagggtgagtcttcggacaccatcgacaacgtcaaggcgaagatccaggacaaggag 570 |||||| ||| |||||||| || || || |||||||| |||||||||||||||||| Sbjct: 955 ttggaggtggagagctcggacacgattgataatgtcaaggcaaagatccaggacaaggag 1014 Query: 571 ggcattcccccggaccagcag 591 || ||||| ||||| |||||| Sbjct: 1015 gggattccaccggatcagcag 1035 Score = 180 bits (91), Expect = 5e-42 Identities = 187/219 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||| || || || |||||||| ||| | ||||| ||| ||| Sbjct: 913 atgcagatctttgttaagacgcttacagggaagaccattaccttggaggtggagagctcg 972 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||| || || |||||||| |||||||||||||||||||| || || ||||| ||| Sbjct: 973 gacacgattgataatgtcaaggcaaagatccaggacaaggaggggattccaccggatcag 1032 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||| |||||||| |||||||| |||||||| || || |||||| Sbjct: 1033 cagaggctgatctttgctgggaagcagctggaggacgggcgcaccctggcagattacaac 1092 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctc 459 || |||||||| |||||||| |||||||||||||||||| Sbjct: 1093 attcagaaggaatccacccttcacctggtgctccgcctc 1131 Score = 42.1 bits (21), Expect = 2.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 724 ctcactggcaagaacatcacccttg 748 ||||||||||||| ||||||||||| Sbjct: 22 ctcactggcaagaccatcacccttg 46
>ref|XM_874972.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 17 (UBC), mRNA Length = 2588 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1604 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1663 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1664 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1723 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1724 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1783 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1784 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1843 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1844 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1903 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1904 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1962 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1963 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2020 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 2060 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 2119 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2120 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2179 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2180 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2239 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2240 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2299 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2300 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 2359 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2360 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2418 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2419 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2476 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1832 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1891 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1892 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1951 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1952 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2011 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2012 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2071 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 2072 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 2131 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2132 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2190 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2191 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2248 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 920 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 979 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 980 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1039 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1040 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1099 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| |||| ||||||||||| Sbjct: 1100 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgtgatgcagatctt 1159 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1160 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1219 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1220 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1278 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1279 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1336 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 692 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 751 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 752 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 811 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 812 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 871 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 872 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 931 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 932 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 991 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 992 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1050 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1051 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1108 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 464 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 523 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 524 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 583 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 584 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 643 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 644 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 703 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 704 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 763 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 764 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 822 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 823 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 880 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 236 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 295 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 296 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 355 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 356 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 415 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 416 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 475 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 476 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 535 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 536 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 594 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 595 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 652 Score = 339 bits (171), Expect = 9e-90 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1148 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1207 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1208 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1267 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1268 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1327 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1328 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1387 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1388 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1447 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1448 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1506 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1507 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1564 Score = 335 bits (169), Expect = 1e-88 Identities = 359/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1376 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1435 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1436 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1495 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1496 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1555 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1556 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1615 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1616 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1675 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1676 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1734 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 1735 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaag 1793 Query: 660 g 660 | Sbjct: 1794 g 1794 Score = 313 bits (158), Expect = 5e-82 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || || |||||||| || ||||| ||| || | Sbjct: 9 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 68 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| |||||||||| |||||| || || || || ||||||||||| |||||| Sbjct: 69 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 128 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct: 129 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 188 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 189 atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc 248 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 249 gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 308 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || || Sbjct: 309 aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgat 367 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 368 ctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 424 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 2288 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 2347 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2348 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2407 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2408 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2467 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2468 catccagaaagagtccac 2485
>ref|XM_875556.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 24 (UBC), mRNA Length = 2580 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1596 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1655 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1656 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1715 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1716 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1775 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1776 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1835 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1836 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1895 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1896 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1954 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1955 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2012 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 456 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 515 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 516 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 575 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 576 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 635 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 636 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 695 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 696 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 755 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 756 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 814 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 815 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 872 Score = 351 bits (177), Expect = 2e-93 Identities = 361/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 228 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 287 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 288 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 347 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 348 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 407 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 408 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 467 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 468 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 527 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 528 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 586 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 587 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaag 645 Query: 660 g 660 | Sbjct: 646 g 646 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 2052 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 2111 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2112 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2171 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2172 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2231 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2232 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2291 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2292 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 2351 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2352 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2410 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2411 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2468 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1824 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1883 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1884 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1943 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1944 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2003 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2004 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2063 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 2064 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 2123 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2124 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2182 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2183 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2240 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 912 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 971 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 972 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1031 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1032 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1091 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| |||| ||||||||||| Sbjct: 1092 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgtgatgcagatctt 1151 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1152 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1211 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1212 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1270 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1271 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1328 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 684 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 743 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 744 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 803 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 804 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 863 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 864 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 923 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 924 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 983 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 984 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1042 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1043 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1100 Score = 339 bits (171), Expect = 9e-90 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1140 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1199 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1200 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1259 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1260 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1319 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1320 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1379 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1380 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1439 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1440 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1498 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1499 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1556 Score = 335 bits (169), Expect = 1e-88 Identities = 359/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1368 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1427 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1428 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1487 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1488 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1547 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1548 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1607 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1608 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1667 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1668 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1726 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 1727 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaag 1785 Query: 660 g 660 | Sbjct: 1786 g 1786 Score = 313 bits (158), Expect = 5e-82 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || || |||||||| || ||||| ||| || | Sbjct: 1 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 60 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| |||||||||| |||||| || || || || ||||||||||| |||||| Sbjct: 61 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 120 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct: 121 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 180 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 181 atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc 240 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 241 gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 300 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || || Sbjct: 301 aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgat 359 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 360 ctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 416 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 2280 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 2339 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2340 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2399 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2400 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2459 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2460 catccagaaagagtccac 2477
>ref|XM_875198.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 19 (UBC), mRNA Length = 2588 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1604 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1663 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1664 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1723 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1724 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1783 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1784 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1843 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1844 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1903 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1904 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1962 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1963 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2020 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 2060 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 2119 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2120 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2179 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2180 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2239 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2240 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2299 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 2300 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 2359 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2360 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2418 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2419 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2476 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1832 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1891 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1892 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1951 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1952 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2011 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 2012 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 2071 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 2072 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 2131 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 2132 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 2190 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 2191 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2248 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 920 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 979 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 980 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1039 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1040 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1099 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| |||| ||||||||||| Sbjct: 1100 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgtgatgcagatctt 1159 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1160 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1219 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1220 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1278 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1279 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1336 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 692 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 751 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 752 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 811 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 812 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 871 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 872 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 931 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 932 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 991 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 992 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1050 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1051 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1108 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 464 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 523 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 524 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 583 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 584 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 643 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 644 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 703 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 704 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 763 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 764 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 822 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 823 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 880 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 236 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 295 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 296 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 355 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 356 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 415 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 416 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 475 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 476 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 535 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 536 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 594 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 595 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 652 Score = 339 bits (171), Expect = 9e-90 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1148 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1207 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1208 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1267 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1268 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1327 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1328 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1387 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1388 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1447 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1448 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1506 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1507 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1564 Score = 335 bits (169), Expect = 1e-88 Identities = 359/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1376 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1435 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1436 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1495 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1496 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1555 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1556 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1615 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1616 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1675 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1676 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1734 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 1735 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaag 1793 Query: 660 g 660 | Sbjct: 1794 g 1794 Score = 313 bits (158), Expect = 5e-82 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || || |||||||| || ||||| ||| || | Sbjct: 9 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 68 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| |||||||||| |||||| || || || || ||||||||||| |||||| Sbjct: 69 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 128 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct: 129 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 188 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 189 atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc 248 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 249 gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 308 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || || Sbjct: 309 aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgat 367 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 368 ctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 424 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 2288 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 2347 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 2348 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 2407 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 2408 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2467 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2468 catccagaaagagtccac 2485
>ref|XM_874142.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 7 (UBC), mRNA Length = 2172 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1148 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1207 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1208 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1267 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1268 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1327 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1328 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1387 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1388 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1447 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1448 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1506 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1507 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1564 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 464 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 523 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 524 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 583 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 584 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 643 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 644 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 703 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 704 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 763 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 764 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 822 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 823 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 880 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1604 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1663 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1664 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1723 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1724 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1783 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1784 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1843 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1844 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1903 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1904 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1962 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1963 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 2020 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1376 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1435 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1436 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1495 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1496 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1555 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1556 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1615 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1616 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1675 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1676 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1734 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1735 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1792 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 236 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 295 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 296 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 355 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 356 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 415 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 416 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 475 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 476 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 535 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 536 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 594 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 595 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 652 Score = 339 bits (171), Expect = 9e-90 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 692 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 751 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 752 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 811 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 812 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 871 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 872 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 931 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 932 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 991 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 992 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1050 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1051 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 1108 Score = 335 bits (169), Expect = 1e-88 Identities = 359/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 920 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 979 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 980 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1039 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1040 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1099 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1100 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1159 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1160 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1219 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1220 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1278 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 1279 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaag 1337 Query: 660 g 660 | Sbjct: 1338 g 1338 Score = 313 bits (158), Expect = 5e-82 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || || |||||||| || ||||| ||| || | Sbjct: 9 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 68 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| |||||||||| |||||| || || || || ||||||||||| |||||| Sbjct: 69 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 128 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct: 129 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 188 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 189 atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc 248 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 249 gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 308 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || || Sbjct: 309 aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgat 367 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 368 ctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 424 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1832 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1891 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1892 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1951 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1952 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 2011 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2012 catccagaaagagtccac 2029
>ref|XM_874048.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 6 (UBC), mRNA Length = 1904 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 920 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 979 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 980 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1039 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 1040 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 1099 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1100 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1159 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1160 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1219 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1220 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1278 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1279 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1336 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1376 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1435 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1436 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1495 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1496 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1555 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1556 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1615 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1616 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1675 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1676 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1734 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1735 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1792 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1148 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1207 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1208 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1267 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1268 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1327 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1328 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1387 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1388 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1447 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1448 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1506 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1507 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1564 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 464 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 523 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 524 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 583 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 584 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 643 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 644 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 703 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 704 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 763 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 764 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 822 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 823 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 880 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 236 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 295 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 296 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 355 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 356 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 415 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 416 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 475 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 476 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 535 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 536 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 594 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 595 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 652 Score = 343 bits (173), Expect = 6e-91 Identities = 360/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 692 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 751 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 752 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 811 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 812 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 871 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 872 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 931 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 932 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 991 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 992 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1050 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 1051 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaag 1109 Query: 660 g 660 | Sbjct: 1110 g 1110 Score = 313 bits (158), Expect = 5e-82 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || || |||||||| || ||||| ||| || | Sbjct: 9 atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt 68 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| |||||||||| |||||| || || || || ||||||||||| |||||| Sbjct: 69 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 128 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || || ||||| || || ||||||||||| ||||||||||| Sbjct: 129 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 188 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| || |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 189 atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc 248 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 249 gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 308 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || || Sbjct: 309 aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgat 367 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| |||| || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 368 ctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 424 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1604 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1663 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1664 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1723 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1724 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1783 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 1784 catccagaaagagtccac 1801
>ref|XM_873860.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 4 (UBC), mRNA Length = 1546 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 562 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 621 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 622 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 681 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 682 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 741 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 742 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 801 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 802 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 861 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 862 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 920 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 921 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 978 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 1018 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 1077 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1078 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1137 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1138 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1197 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1198 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1257 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1258 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1317 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1318 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1376 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1377 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1434 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 790 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 849 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 850 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 909 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 910 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 969 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 970 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1029 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 1030 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 1089 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1090 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1148 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1149 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1206 Score = 335 bits (169), Expect = 1e-88 Identities = 359/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 334 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 393 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 394 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 453 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 454 gcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 513 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 514 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 573 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 574 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 633 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 634 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 692 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| || ||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 693 tctttgccggg-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaag 751 Query: 660 g 660 | Sbjct: 752 g 752 Score = 216 bits (109), Expect = 9e-53 Identities = 245/289 (84%), Gaps = 2/289 (0%) Strand = Plus / Plus Query: 370 atctttgctggcaagcagcttgaggacggccgcacccttgctgactacaacatccagaag 429 |||||||| || || ||||| || || ||||||||||| ||||||||||||||||||| Sbjct: 236 atctttgccgggaaacagctggaagatggccgcaccctgtctgactacaacatccagaaa 295 Query: 430 gagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttcgtgaagacc 489 |||||||| || |||||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 296 gagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttcgtgaagacc 355 Query: 490 ctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgacaacgtcaag 549 | ||||||||||||||||| ||||||| ||| | ||||||||||| ||||||||| Sbjct: 356 ttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaag 415 Query: 550 gcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcatntttgncgg 609 || |||||||| ||||| |||||||| ||||| ||||||||| || || || |||| ||| Sbjct: 416 gccaagatccaagacaaagagggcatccccccagaccagcagagg-ctgatctttgccgg 474 Query: 610 gcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | || ||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 475 g-aaacagctggaagatgggcgcaccctgtctgactacaacatccagaa 522 Score = 210 bits (106), Expect = 5e-51 Identities = 193/222 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 8 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 67 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 68 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 127 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 128 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 187 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcag 461 ||||||||| |||||||| || |||||||| ||||||||||| Sbjct: 188 catccagaaagagtccactctgcacctggtcctccgcctcag 229 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1246 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1305 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1306 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1365 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1366 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1425 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 1426 catccagaaagagtccac 1443 Score = 151 bits (76), Expect = 4e-33 Identities = 167/196 (85%), Gaps = 2/196 (1%) Strand = Plus / Plus Query: 463 ggtggtatgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgag 522 ||||| ||||||||||||||||||||| | ||||||||||||||||||||||||| ||| Sbjct: 3 ggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggag 62 Query: 523 tcttcggacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccg 582 | ||||||||||| ||||||||||| |||||||| ||||| |||||||| ||||| Sbjct: 63 cccagtgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatcccccca 122 Query: 583 gaccagcagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctg 642 ||||||||| || || || |||| |||| || ||||| || |||||||| ||||| ||| Sbjct: 123 gaccagcagagg-ctgatctttgccggg-aaacagctggaagatggccgcaccctgtctg 180 Query: 643 nctacaacatccagaa 658 ||||||||||||||| Sbjct: 181 actacaacatccagaa 196
>gb|AY478418.1| Clusia minor polyubiquitin (Ubq1) mRNA, partial cds Length = 750 Score = 355 bits (179), Expect = 1e-94 Identities = 361/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||||||||| |||||||| |||||| | ||||| ||| ||| Sbjct: 87 atgcagatctttgttaagaccctcactggcaagactatcaccttggaggtggagagctcc 146 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || |||||||||||||| |||||||||||||||||||| || |||||||||||| Sbjct: 147 gacacaattgacaacgtcaaggctaagatccaggacaaggaggggattcccccggaccag 206 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||| || |||||||||||||| ||||| ||||| || || |||||||| ||| Sbjct: 207 cagaggctcatattcgctggcaagcagctggaggatggccgtacgctggctgactataac 266 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 || ||||||||||||||||||||| |||| ||||| || | ||||| ||||||||||| Sbjct: 267 attcagaaggagtccaccctccacttggttctccgtctacgtggtggcatgcagatcttt 326 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || || |||||||||||||| |||| |||| ||||||||||| ||| Sbjct: 327 gtgaagacccttactggaaagaccatcacccttgaggttgagagctcggacaccattgac 386 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| |||||||| || ||||||||||||||||||||||||||| || | || Sbjct: 387 aatgtcaaggctaagatccaagataaggagggcattcccccggaccagcagagg-ttgat 445 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| ||||| || || ||||| | ||||||||||||||||| Sbjct: 446 ctttg-ctggcaagcagcttgaggatgggcgtactcttgcagactacaacatccagaagg 504 Score = 256 bits (129), Expect = 1e-64 Identities = 352/421 (83%), Gaps = 5/421 (1%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || || |||||||||||||||||||||||| ||| Sbjct: 315 atgcagatctttgtgaagacccttactggaaagaccatcacccttgaggttgagagctcg 374 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| |||||||| |||||||| || ||||||||||| |||||||||||| Sbjct: 375 gacaccattgacaatgtcaaggctaagatccaagataaggagggcattcccccggaccag 434 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | | |||||||||||||||||||||||||| || || || ||||| ||||||||| Sbjct: 435 cagaggttgatctttgctggcaagcagcttgaggatgggcgtactcttgcagactacaac 494 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||| ||||||||||| |||| || |||||| | ||||| |||||||| || Sbjct: 495 atccagaaggaatccaccctccatttggtccttcgcctccgtggtggcatgcagatattt 554 Query: 481 gtgaagaccctcaccgg-caagaccatcac-cctggagggtgagtcttcggacaccatcg 538 |||||||| || ||||| ||||||||||| |||| |||||| || || ||||| | Sbjct: 555 gtgaagactcttaccggaaaagaccatcacttttgganggtgagaactccgataccattg 614 Query: 539 acaa-cgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcct 597 | || || ||||| |||||||||||||||||||| | |||||| ||||| |||||| | Sbjct: 615 ataatggttaaggccaagatccaggacaaggagggga-tcccccagaccaacagcgg-nt 672 Query: 598 catntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccaga 657 || |||| | ||||||||||||||||| || || ||||| | |||||||||||||| Sbjct: 673 gatttttgcangnaaagcagcttgangatgggcgtactcttgcagactacaacatccaga 732 Query: 658 a 658 | Sbjct: 733 a 733 Score = 236 bits (119), Expect = 1e-58 Identities = 238/276 (86%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 385 cagcttgaggacggccgcacccttgctgactacaacatccagaaggagtccaccctccac 444 |||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 3 cagcttgaagacggccgtacccttgctgattacaacatccagaaggagtccaccctccac 62 Query: 445 ctggtgctccgcctcaggggtggtatgcagatcttcgtgaagaccctcaccggcaagacc 504 |||||||| | | |||||||| ||||||||||| || ||||||||||| |||||||| Sbjct: 63 ttggtgctcaggttgaggggtggcatgcagatctttgttaagaccctcactggcaagact 122 Query: 505 atcaccctggagggtgagtcttcggacaccatcgacaacgtcaaggcgaagatccaggac 564 |||||| |||||| ||| || ||||| || |||||||||||||| |||||||||||| Sbjct: 123 atcaccttggaggtggagagctccgacacaattgacaacgtcaaggctaagatccaggac 182 Query: 565 aaggagggcattcccccggaccagcagcggcctcatntttgncgggcaagcagcttgang 624 |||||||| |||||||||||||||||| || ||||| || | | ||||||||||| || | Sbjct: 183 aaggaggggattcccccggaccagcagagg-ctcatattcg-ctggcaagcagctggagg 240 Query: 625 atggccgaacccttgctgnctacaacatccagaagg 660 ||||||| || || |||| ||| ||||| ||||||| Sbjct: 241 atggccgtacgctggctgactataacattcagaagg 276 Score = 67.9 bits (34), Expect = 5e-08 Identities = 104/126 (82%), Gaps = 2/126 (1%) Strand = Plus / Plus Query: 319 aaggcgaagatccaggacaaggagggcatccccccggaccagcagcgcctcatctttgct 378 ||||| |||||||||||||||||||| ||||||| | |||| ||||| | || ||||| Sbjct: 624 aaggccaagatccaggacaaggaggggatcccccag-accaacagcggntgatttttgca 682 Query: 379 ggcaa-gcagcttgaggacggccgcacccttgctgactacaacatccagaaggagtccac 437 | || ||||||||| || || || || ||||| ||||||||||||||||| | ||||| Sbjct: 683 ngnaaagcagcttgangatgggcgtactcttgcagactacaacatccagaaaggatccac 742 Query: 438 cctcca 443 |||||| Sbjct: 743 cctcca 748
>gb|AF517848.1| Griffithsia japonica isolate Gj526 polyubiquitin mRNA, partial cds Length = 741 Score = 355 bits (179), Expect = 1e-94 Identities = 361/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| || || ||||| |||||||||||||||||||| || ||||| ||||| ||| Sbjct: 280 atgcagattttcgtcaagacactcaccggcaagaccatcacgctcgaggtcgagtcgtct 339 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||| || ||||||||| ||||||||||||| |||||||||||||| ||||||||| Sbjct: 340 gacacgattgaaaacgtcaagacgaagatccaggataaggagggcatccctccggaccag 399 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||| || |||||||||||||| || |||||||||||||| | ||||||||| Sbjct: 400 cagcgtctcattttcgctggcaagcagctcgaagacggccgcaccctgtccgactacaac 459 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| || ||||| ||||||||||| || | || || |||||||| ||| Sbjct: 460 atccagaaggagtcgacgctccatctggtgctccgtctgcgtggaggcatgcagattttc 519 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| |||||||||||||| |||||||| |||| ||||| |||||||| || || Sbjct: 520 gtcaagacactcaccggcaagactatcaccctcgaggtggagtcgtcggacacgattgaa 579 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||| ||||||||||||| ||||||||||| || |||||||||||||| | |||| Sbjct: 580 aacgtcaagacgaagatccaggataaggagggcatccctccggaccagcagcgtc-tcat 638 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || || ||||| ||||| | | ||||||||||||||||| Sbjct: 639 tttcg-ctggcaagcagctcgaagacggccgcaccctgtccgactacaacatccagaagg 697 Score = 315 bits (159), Expect = 1e-82 Identities = 356/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||||||||| |||||||||||||| ||||| ||||| || Sbjct: 52 atgcagatcttcgtcaagaccctcaccggaaagaccatcaccctcgaggtcgagtcgtcg 111 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || || || || |||||| | ||||| |||||||||||||| ||||| ||||||||| Sbjct: 112 gataccattgagaatgtcaagaccaagattcaggacaaggagggtatccctccggaccag 171 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||| ||||| ||||| ||||||||||||||||| | ||||| ||| Sbjct: 172 cagcgtctcatctttgccggcaaacagctcgaggacggccgcaccctgtccgactataac 231 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| || ||||||||||| || | || || |||||||| ||| Sbjct: 232 atccagaaggagtcgacccttcatctggtgctccgtctgcgtggaggcatgcagattttc 291 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| |||||||||||||||||||| || |||| ||||| || ||||| || || Sbjct: 292 gtcaagacactcaccggcaagaccatcacgctcgaggtcgagtcgtctgacacgattgaa 351 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||| ||||||||||||| ||||||||||| || ||||||||||||| | ||||| Sbjct: 352 aacgtcaagacgaagatccaggataaggagggcatccctccggaccagcagc-gtctcat 410 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 ||| | ||||||||||| || || ||||| ||||| | | ||||||||||||||||| Sbjct: 411 -tttcgctggcaagcagctcgaagacggccgcaccctgtccgactacaacatccagaagg 469 Score = 236 bits (119), Expect = 1e-58 Identities = 194/219 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| || || ||||| |||||||||||||| |||||||| ||||| ||||| || Sbjct: 508 atgcagattttcgtcaagacactcaccggcaagactatcaccctcgaggtggagtcgtcg 567 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||| || ||||||||| ||||||||||||| |||||||||||||| ||||||||| Sbjct: 568 gacacgattgaaaacgtcaagacgaagatccaggataaggagggcatccctccggaccag 627 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||| || |||||||||||||| || |||||||||||||| | ||||||||| Sbjct: 628 cagcgtctcattttcgctggcaagcagctcgaagacggccgcaccctgtccgactacaac 687 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctc 459 |||||||||||||| || ||||| ||||||||||||||| Sbjct: 688 atccagaaggagtcgacgctccatctggtgctccgcctc 726
>gb|AF104025.1|AF104025 Bovine viral diarrhea virus-2 subgenome C5 polyprotein mRNA, partial cds Length = 1553 Score = 355 bits (179), Expect = 1e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 926 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 985 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 986 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1045 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1046 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1105 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 1106 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 1165 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 1166 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 1225 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 1226 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 1284 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 1285 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1342 Score = 214 bits (108), Expect = 4e-52 Identities = 198/228 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 1154 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 1213 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 1214 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 1273 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 1274 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 1333 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 ||||||||| |||||||| || |||||||| ||||||||||| ||||| Sbjct: 1334 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgg 1381 Score = 151 bits (76), Expect = 4e-33 Identities = 167/196 (85%), Gaps = 2/196 (1%) Strand = Plus / Plus Query: 463 ggtggtatgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgag 522 ||||| ||||||||||||||||||||| | ||||||||||||||||||||||||| ||| Sbjct: 921 ggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggag 980 Query: 523 tcttcggacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccg 582 | ||||||||||| ||||||||||| |||||||| ||||| |||||||| ||||| Sbjct: 981 cccagtgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatcccccca 1040 Query: 583 gaccagcagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctg 642 ||||||||| || || || |||| |||| || ||||| || |||||||| ||||| ||| Sbjct: 1041 gaccagcagagg-ctgatctttgccggg-aaacagctggaagatggccgcaccctgtctg 1098 Query: 643 nctacaacatccagaa 658 ||||||||||||||| Sbjct: 1099 actacaacatccagaa 1114
>gb|U77939.1|PVU77939 Phaseolus vulgaris ubiquitin-like protein mRNA, complete cds Length = 1399 Score = 355 bits (179), Expect = 1e-94 Identities = 308/351 (87%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||| || ||||| |||||||||||||||||||| ||| |||| Sbjct: 356 atgcagatctttgtgaagactcttaccggaaagaccatcacccttgaggtggagagctct 415 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| |||||||||||||||||||| || |||||||||||| Sbjct: 416 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggaattcccccggaccag 475 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | | ||||| ||||| |||||||| ||||| || |||||||| || ||||||||| Sbjct: 476 cagaggttgatcttcgctggaaagcagctggaggatgggcgcaccctcgccgactacaac 535 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||| || ||||| |||||||| ||||| ||| | ||||| ||||||||||| Sbjct: 536 atccagaaggaatcaacccttcacctggttctccgtctccgtggtggcatgcagatcttt 595 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| || |||||||||||||||||||| |||| ||| || |||||||||||| Sbjct: 596 gtgaagactcttaccggcaagaccatcaccctcgaggtggagagctctgacaccatcgac 655 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 ||||| ||||| |||||||||||||||||||| || ||||||||||||||| Sbjct: 656 aacgtgaaggccaagatccaggacaaggagggaatacccccggaccagcag 706 Score = 260 bits (131), Expect = 7e-66 Identities = 296/351 (84%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||| || |||||||||||||||||||| ||||| ||| |||| Sbjct: 584 atgcagatctttgtgaagactcttaccggcaagaccatcaccctcgaggtggagagctct 643 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||| ||||| |||||||||||||||||||| || |||||||||||| Sbjct: 644 gacaccatcgacaacgtgaaggccaagatccaggacaaggagggaatacccccggaccag 703 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | | ||||| ||||| || ||||| ||||| || | ||||| || ||||| ||| Sbjct: 704 cagaggttgatcttcgctggaaaacagctggaggatggaaggaccctcgccgactataac 763 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| || |||||| ||||| | || || | || |||||||||||||| Sbjct: 764 atccagaaggagtcaactctccacttggtgttgcgtcttcgtgggggtatgcagatcttt 823 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||||||||| || ||||| || || || |||| ||| ||||||||| || ||| Sbjct: 824 gtgaagaccctcactggtaagactattactcttgaggtggagagttcggacactattgac 883 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || || ||||| ||||||||||| |||||||| ||||||||||| |||||| Sbjct: 884 aatgtgaaggccaagatccaggataaggagggtattcccccggatcagcag 934 Score = 222 bits (112), Expect = 1e-54 Identities = 344/420 (81%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||||||||| || ||||| || || |||||||| ||| || Sbjct: 812 atgcagatctttgtgaagaccctcactggtaagactattactcttgaggtggagagttcg 871 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| || ||||| ||||||||||| |||||||| || |||||||| ||| Sbjct: 872 gacactattgacaatgtgaaggccaagatccaggataaggagggtattcccccggatcag 931 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | | || || ||||| ||||||||||||||||| | |||||||||||||| ||| Sbjct: 932 cagaggttgatattcgctgggaagcagcttgaggacgggaggacccttgctgactataac 991 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 || |||||||| || ||||| ||||| || || || || ||||| || |||||||| ||| Sbjct: 992 attcagaaggaatctacccttcaccttgtccttcgtcttaggggaggaatgcagattttc 1051 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| || || |||||||| ||||| |||| ||| || |||||||||||| Sbjct: 1052 gtcaagacccttacgggtaagaccattacccttgaggtggagagctctgacaccatcgac 1111 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || |||||||| || ||||||||||||||||| || |||||||||||| || | || Sbjct: 1112 aatgtgaaggcgaaaattcaggacaaggagggcatcccaccggaccagcagagg-ttgat 1170 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| ||| |||||| | || ||||| |||||||||||| |||||||| ||||||| Sbjct: 1171 ctttgcaggg-aagcagttggaggatggaagaacccttgctgattacaacattcagaagg 1229 Score = 186 bits (94), Expect = 8e-44 Identities = 234/279 (83%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 382 aagcagcttgaggacggccgcacccttgctgactacaacatccagaaggagtccaccctc 441 |||||||| ||||| || |||||||| || ||||||||||| || ||||| || ||||| Sbjct: 269 aagcagctggaggatgggcgcaccctcgccgactacaacattcaaaaggaatcaaccctt 328 Query: 442 cacctggtgctccgcctcaggggtggtatgcagatcttcgtgaagaccctcaccggcaag 501 ||||| || ||||| ||| | ||||| ||||||||||| |||||||| || ||||| ||| Sbjct: 329 cacctagttctccgtctccgtggtggcatgcagatctttgtgaagactcttaccggaaag 388 Query: 502 accatcaccctggagggtgagtcttcggacaccatcgacaacgtcaaggcgaagatccag 561 ||||||||||| |||| ||| || ||||||||||||||||||||||| ||||||||| Sbjct: 389 accatcacccttgaggtggagagctctgacaccatcgacaacgtcaaggccaagatccag 448 Query: 562 gacaaggagggcattcccccggaccagcagcggcctcatntttgncgggcaagcagcttg 621 ||||||||||| |||||||||||||||||| || | || || | | || |||||||| | Sbjct: 449 gacaaggagggaattcccccggaccagcagaggt-tgatcttcg-ctggaaagcagctgg 506 Query: 622 angatggccgaacccttgctgnctacaacatccagaagg 660 | ||||| || ||||| || | ||||||||||||||||| Sbjct: 507 aggatgggcgcaccctcgccgactacaacatccagaagg 545 Score = 155 bits (78), Expect = 3e-34 Identities = 174/206 (84%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| || || |||||||| || || |||||||| ||||||||||| ||| |||| Sbjct: 1040 atgcagattttcgtcaagacccttacgggtaagaccattacccttgaggtggagagctct 1099 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| || |||||||| || |||||||||||||||||||| ||||||||| Sbjct: 1100 gacaccatcgacaatgtgaaggcgaaaattcaggacaaggagggcatcccaccggaccag 1159 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | | |||||||| || |||||| | ||||| || | ||||||||||| |||||| Sbjct: 1160 cagaggttgatctttgcagggaagcagttggaggatggaagaacccttgctgattacaac 1219 Query: 421 atccagaaggagtccaccctccacct 446 || |||||||||||||| || ||||| Sbjct: 1220 attcagaaggagtccactcttcacct 1245
>gb|BC019850.1| Mus musculus ubiquitin B, mRNA (cDNA clone MGC:29922 IMAGE:5123849), complete cds Length = 1146 Score = 353 bits (178), Expect = 6e-94 Identities = 374/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 296 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 355 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 356 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 415 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 || | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 416 cataggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 475 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| ||||| || |||||||| |||||||||||| Sbjct: 476 atccagaaggagtcaaccctgcacctggtcctccgtctgaggggtggcatgcagatcttc 535 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 536 gtgaagaccctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 595 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 596 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 654 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 655 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaagg 713 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 714 agtcaaccctgcacctgg 731 Score = 353 bits (178), Expect = 6e-94 Identities = 374/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 68 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 127 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 128 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 187 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 188 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 247 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || |||||||| |||||||||||| Sbjct: 248 atccagaaagagtcaaccctgcacctggtcctccgtctgaggggtggcatgcagatcttc 307 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 308 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 367 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || |||||||| ||||| |||||||| || || || Sbjct: 368 aatgtgaaggccaagatccaggataaagagggcatcccccctgaccagcatagg-ctgat 426 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 427 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaagg 485 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 486 agtcaaccctgcacctgg 503 Score = 329 bits (166), Expect = 9e-87 Identities = 356/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 524 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 583 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 584 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 643 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 644 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 703 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 704 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 763 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 764 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 823 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 824 aatgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 882 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || || ||| |||||||||||||| Sbjct: 883 ctttgcc-ggcaagcagctggaagatggccgcactctctctgattacaacatccagaa 939 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 752 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 811 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 812 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 871 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || |||||||| || |||| |||||| Sbjct: 872 cagaggctgatctttgccggcaagcagctggaagatggccgcactctctctgattacaac 931 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| ||||| || |||||||| Sbjct: 932 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtgg 978
>ref|XR_004580.1| PREDICTED: Mus musculus gene model 1821, (NCBI) (Gm1821), misc RNA Length = 746 Score = 353 bits (178), Expect = 6e-94 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 104 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 163 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 164 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 223 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 224 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 283 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| ||||| || |||||||| |||||||||||| Sbjct: 284 atccagaaggagtcaaccctgcacctggtcctccgtctgaggggtggcatgcagatcttc 343 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 344 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 403 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 404 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 462 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || || ||| |||||||||||||| Sbjct: 463 ctttgcc-ggcaagcagctagaagatggccgcactctctctgattacaacatccagaa 519 Score = 196 bits (99), Expect = 8e-47 Identities = 186/215 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 332 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 391 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 392 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 451 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || |||||||| || |||| |||||| Sbjct: 452 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 511 Query: 421 atccagaaggagtccaccctccacctggtgctccg 455 |||||||| ||||| ||||| |||||||| ||||| Sbjct: 512 atccagaaagagtcgaccctgcacctggtcctccg 546 Score = 155 bits (78), Expect = 3e-34 Identities = 178/210 (84%), Gaps = 2/210 (0%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||||||||||||||||||||| |||||||||||||||||||| |||| ||| | Sbjct: 104 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 163 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 ||||||||||| ||||| ||||| ||||||||||| || |||||||| ||||| |||||| Sbjct: 164 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 223 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||| || || || |||| | ||||||||||| || |||||||| ||||| ||| |||| Sbjct: 224 cagagg-ctgatctttgcc-ggcaagcagctggaagatggccgcaccctctctgattaca 281 Query: 649 acatccagaaggggtcacccctgcccctgg 678 |||||||||||| |||| |||||| ||||| Sbjct: 282 acatccagaaggagtcaaccctgcacctgg 311
>gb|BC025894.1| Mus musculus ubiquitin C, mRNA (cDNA clone IMAGE:5055216), complete cds Length = 1213 Score = 353 bits (178), Expect = 6e-94 Identities = 360/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||| ||||||||||| ||||| ||| || Sbjct: 509 gatgcagatctttgtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccag 568 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 569 tgacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 628 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 629 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 688 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 689 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 748 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 749 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 808 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 809 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 867 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 868 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 925 Score = 351 bits (177), Expect = 2e-93 Identities = 359/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 282 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 341 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 342 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 401 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 402 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 461 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 462 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtgggatgcagatcttt 521 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || ||||| |||||||||||||||| ||| | |||||||| || Sbjct: 522 gtgaagaccctgacaggcaaaaccatcaccctggaggtcgagcccagtgacaccattgag 581 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || || Sbjct: 582 aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctgat 640 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 641 ctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 697 Score = 337 bits (170), Expect = 4e-89 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||| ||| | || || |||||||||||||| ||||| ||| || Sbjct: 53 gatgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccag 112 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 113 tgacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 172 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 173 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 232 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 233 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 292 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 293 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 352 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 353 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 411 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 412 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 469 Score = 291 bits (147), Expect = 2e-75 Identities = 243/275 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 738 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 797 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 798 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 857 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 858 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 917 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 918 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 977 Query: 481 gtgaagaccctcaccggcaagaccatcaccctgga 515 ||||||||||| || |||||||||||||||||||| Sbjct: 978 gtgaagaccctgacaggcaagaccatcaccctgga 1012
>dbj|AK013873.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3000008M07 product:ubiquitin B, full insert sequence Length = 1162 Score = 353 bits (178), Expect = 6e-94 Identities = 374/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| | ||| ||| || | Sbjct: 326 atgcagatcttcgtgaagacccttaccggcaagaccatcaccctgggggtggagcccagt 385 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 386 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 445 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 446 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 505 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| ||||| || |||||||| |||||||||||| Sbjct: 506 atccagaaagagtcaaccctgcacctggtcctccgtctgaggggtggcatgcagatcttc 565 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||| | ||||||||||| Sbjct: 566 gtgaagaccctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 625 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 626 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 684 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 685 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaagg 743 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 744 agtcaaccctgcacctgg 761 Score = 329 bits (166), Expect = 9e-87 Identities = 356/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 554 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt 613 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 614 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 673 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 674 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 733 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 734 atccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 793 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||| |||||| ||| | ||||||||||| Sbjct: 794 gtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagtgacaccatcgag 853 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| ||||||||||| ||||| ||||||||| || || || Sbjct: 854 aatgtgaaggccaagatccaggataaggagggcatcccccctgaccagcagagg-ctgat 912 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || || ||| |||||||||||||| Sbjct: 913 ctttgcc-ggcaagcagctagaagatggccgcactctctctgattacaacatccagaa 969 Score = 321 bits (162), Expect = 2e-84 Identities = 370/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 98 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 157 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||| ||| || |||||||||||||| |||||| Sbjct: 158 gacaccatcgagaacgtgaaggccaagatccgggataaagagggcatcccccctgaccag 217 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || || ||||||| |||| |||||| Sbjct: 218 cagaggctgatctttgccggcaagcagctggaagatggaagcaccctctctgattacaac 277 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 | |||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 278 aaccagaaggagtcaaccctgcacctggtccttcgcctgagaggtggcatgcagatcttc 337 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||||||| || ||| | ||||||||||| Sbjct: 338 gtgaagacccttaccggcaagaccatcaccctgggggtggagcccagtgacaccatcgag 397 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 398 aacgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 456 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||| | Sbjct: 457 ctttgcc-ggcaagcagctggaagatggccgcaccctctctgattacaacatccagaaag 515 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 516 agtcaaccctgcacctgg 533 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||| | ||||| ||| || | Sbjct: 782 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccttggaggtggagcccagt 841 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 842 gacaccatcgagaatgtgaaggccaagatccaggataaggagggcatcccccctgaccag 901 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || |||||||| || |||| |||||| Sbjct: 902 cagaggctgatctttgccggcaagcagctagaagatggccgcactctctctgattacaac 961 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| ||||| || |||||||| Sbjct: 962 atccagaaagagtcgaccctgcacctggtcctccgtctgaggggtgg 1008
>gb|DQ216252.1| Taeniopygia guttata clone 0058P0005E02 ubiquitin C variant 12-like mRNA, complete sequence Length = 1378 Score = 347 bits (175), Expect = 4e-92 Identities = 377/443 (85%), Gaps = 2/443 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||| || Sbjct: 296 gatgcagatctttgtgaagaccctgaccggcaagaccatcacccttgaggtggagcccag 355 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||| || || || || ||| | Sbjct: 356 tgacaccatcgagaatgtcaaggccaagatccaggacaaggaaggtattcctcctgacaa 415 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || ||||||||||| |||||||| || || || |||||||| | |||||||| Sbjct: 416 gcagaggctgatctttgctggtaagcagctggaagatgggcgcaccctgtcagactacaa 475 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||| |||||||| ||||||||||| |||||||| ||||| ||||||||||| Sbjct: 476 tatccagaaggaatccaccctgcacctggtgctgcgcctcagaggtgggatgcagatctt 535 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||| |||||||| ||||||||||||||||||||||| | |||| | ||||||||||| Sbjct: 536 cgtcaagaccctgaccggcaagaccatcaccctggaagttgagcccagtgacaccatcga 595 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| ||||||||||||||||| ||||||||||| ||||||||| || || | Sbjct: 596 gaacgtcaaggccaagatccaggacaaggaaggcattcccccagaccagcagagg-ctga 654 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | || |||||||| || ||||| || ||||| | | ||||||||||||||| Sbjct: 655 tctttg-ctggtaagcagctggaagatgggcgcaccctctccgactacaacatccagaaa 713 Query: 660 gggtcacccctgcccctggngct 682 | |||| | |||| ||||| ||| Sbjct: 714 gagtcaactctgcacctggtgct 736 Score = 339 bits (171), Expect = 9e-90 Identities = 306/351 (87%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||||||||| ||| || | Sbjct: 69 atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggtggagcccagt 128 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 129 gacaccattgaaaatgtcaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| ||||| || |||||||| | ||||||||| Sbjct: 189 cagaggctgatctttgctggcaagcagctggaggatgggcgcaccctctccgactacaac 248 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| || |||||||||||||| |||||||||||||| ||||||||||| Sbjct: 249 atccagaaagagtcaactctccacctggtgctgcgcctcaggggtgggatgcagatcttt 308 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||||||| |||| ||| | ||||||||||| Sbjct: 309 gtgaagaccctgaccggcaagaccatcacccttgaggtggagcccagtgacaccatcgag 368 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || |||||||| ||||||||||||||||| || ||||| || ||| ||||| Sbjct: 369 aatgtcaaggccaagatccaggacaaggaaggtattcctcctgacaagcag 419 Score = 301 bits (152), Expect = 2e-78 Identities = 302/352 (85%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| || |||||||| |||||||||||||||||||| || |||||| || Sbjct: 524 gatgcagatcttcgtcaagaccctgaccggcaagaccatcaccctggaagttgagcccag 583 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| ||||||||||||||||| ||||| ||||| ||||| Sbjct: 584 tgacaccatcgagaacgtcaaggccaagatccaggacaaggaaggcattcccccagacca 643 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || ||||||||||| |||||||| || || || |||||||| | |||||||| Sbjct: 644 gcagaggctgatctttgctggtaagcagctggaagatgggcgcaccctctccgactacaa 703 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||| || || ||||||||||| |||||||||||||| ||||||||||| Sbjct: 704 catccagaaagagtcaactctgcacctggtgctgcgcctcaggggtgggatgcagatctt 763 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||| |||||||| ||||||||||||||||| || |||| ||| | |||||||| || Sbjct: 764 cgtcaagaccctgaccggcaagaccatcactcttgaggtggagcccagtgacaccattga 823 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || || ||||| ||||||||||||||||| |||||||| || ||||||||| Sbjct: 824 aaatgtgaaggccaagatccaggacaaggaaggcattccaccagaccagcag 875 Score = 268 bits (135), Expect = 3e-68 Identities = 367/443 (82%), Gaps = 2/443 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| || |||||||| ||||||||||||||||| |||||||| ||| || Sbjct: 752 gatgcagatcttcgtcaagaccctgaccggcaagaccatcactcttgaggtggagcccag 811 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || || ||||| ||||||||||||||||| ||||| || || ||||| Sbjct: 812 tgacaccattgaaaatgtgaaggccaagatccaggacaaggaaggcattccaccagacca 871 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || || || ||||| |||||||| ||||| || || || | | |||||||| Sbjct: 872 gcagaggctgattttcgctggtaagcagctggaggatggtcgtactttgtccgactacaa 931 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||| || || |||||||||||||| ||||||||||| Sbjct: 932 catccagaaggaatccaccctgcaccttgtcctgcgcctcaggggtgggatgcagatctt 991 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || |||||||||||||||||||| | |||| | ||||||||||| Sbjct: 992 cgtgaagaccctgactggcaagaccatcaccctggaagttgagcccagtgacaccatcga 1051 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||| || || || || ||||||||| || || | Sbjct: 1052 gaatgtcaaggccaagatccaggacaaggaaggtatccctcctgaccagcagagg-ctga 1110 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | ||| | ||||||||||| || ||||| || ||||| | | |||||||||||||||| Sbjct: 1111 t-tttcgctggcaagcagctggaagatgggcgcaccctctccgactacaacatccagaag 1169 Query: 660 gggtcacccctgcccctggngct 682 | |||| | |||| ||||| ||| Sbjct: 1170 gagtcaactctgcacctggtgct 1192 Score = 198 bits (100), Expect = 2e-47 Identities = 196/228 (85%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || ||||||||||||||||| || |||||| || Sbjct: 980 gatgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaagttgagcccag 1039 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||| || ||||| || ||||| Sbjct: 1040 tgacaccatcgagaatgtcaaggccaagatccaggacaaggaaggtatccctcctgacca 1099 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || || || |||||||||||||| || || || |||||||| | |||||||| Sbjct: 1100 gcagaggctgattttcgctggcaagcagctggaagatgggcgcaccctctccgactacaa 1159 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 ||||||||||||||| || || ||||||||||| |||||||||||||| Sbjct: 1160 catccagaaggagtcaactctgcacctggtgctgcgcctcaggggtgg 1207 Score = 129 bits (65), Expect = 2e-26 Identities = 160/190 (84%), Gaps = 2/190 (1%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||||||||| ||||||||||| || ||||||||||||||||| |||| ||| | Sbjct: 69 atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggtggagcccagt 128 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 |||||||| || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129 gacaccattgaaaatgtcaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||| || || || |||| | ||||||||||| || ||||| || ||||| | | ||||| Sbjct: 189 cagagg-ctgatctttg-ctggcaagcagctggaggatgggcgcaccctctccgactaca 246 Query: 649 acatccagaa 658 |||||||||| Sbjct: 247 acatccagaa 256
>gb|DQ363465.1| Ictalurus punctatus clone C153BB02 ubiquitin C mRNA, partial cds Length = 579 Score = 347 bits (175), Expect = 4e-92 Identities = 360/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||||||| || | Sbjct: 118 atgcagatcttcgtgaaaaccctgaccggcaagaccatcacccttgaggttgagcccagt 177 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| || ||||||||||| || ||||| ||||| |||||| Sbjct: 178 gacaccattgagaatgtcaaggccaaaatccaggacaaagaaggcattcccccagaccag 237 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| ||||||||||| Sbjct: 238 cagaggctgatctttgccggcaagcagctggaagatggccgcaccctgtctgactacaac 297 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||||||||| |||||||||||||| || || ||||||||||||||||||||| Sbjct: 298 atccagaaggagtccactctccacctggtgctgcgtctgaggggtggtatgcagatcttc 357 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||| ||||| |||||||||||||||||||| |||| |||| | |||||||| | Sbjct: 358 gtgaaaaccctgaccggcaagaccatcacccttgaggttgagcccagtgacaccattggg 417 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| || ||||||||||| || ||||||||||| ||||||||| || || || Sbjct: 418 aatgtcaaggccaaaatccaggacaaagaaggcattcccccagaccagcagagg-ctgat 476 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || ||||| || ||||| ||| ||||||||||||||||| Sbjct: 477 ctttg-ctggcaagcagctggaagatggtcgcaccctgtctgactacaacatccagaagg 535 Score = 266 bits (134), Expect = 1e-67 Identities = 264/306 (86%), Gaps = 2/306 (0%) Strand = Plus / Plus Query: 355 gaccagcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgac 414 ||||||||| | || |||||||| ||||||||||| || || ||||||||||| ||||| Sbjct: 4 gaccagcagaggctgatctttgccggcaagcagctggaagatggccgcaccctgtctgac 63 Query: 415 tacaacatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcag 474 ||||||||||||||||||||||| |||||||||||||| || || ||||||||||||||| Sbjct: 64 tacaacatccagaaggagtccactctccacctggtgctgcgtctgaggggtggtatgcag 123 Query: 475 atcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacacc 534 ||||||||||| ||||| |||||||||||||||||||| |||| |||| | |||||| Sbjct: 124 atcttcgtgaaaaccctgaccggcaagaccatcacccttgaggttgagcccagtgacacc 183 Query: 535 atcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcgg 594 || || || |||||||| || ||||||||||| || ||||||||||| ||||||||| || Sbjct: 184 attgagaatgtcaaggccaaaatccaggacaaagaaggcattcccccagaccagcagagg 243 Query: 595 cctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatcc 654 || || |||| | ||||||||||| || |||||||| ||||| ||| ||||||||||| Sbjct: 244 -ctgatctttgcc-ggcaagcagctggaagatggccgcaccctgtctgactacaacatcc 301 Query: 655 agaagg 660 |||||| Sbjct: 302 agaagg 307 Score = 222 bits (112), Expect = 1e-54 Identities = 196/224 (87%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||||||| || | Sbjct: 346 atgcagatcttcgtgaaaaccctgaccggcaagaccatcacccttgaggttgagcccagt 405 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || | || |||||||| || ||||||||||| || ||||| ||||| |||||| Sbjct: 406 gacaccattgggaatgtcaaggccaaaatccaggacaaagaaggcattcccccagaccag 465 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| || || || |||||||| ||||||||||| Sbjct: 466 cagaggctgatctttgctggcaagcagctggaagatggtcgcaccctgtctgactacaac 525 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcagggg 464 ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 526 atccagaaggagtccactctccacctggttctccgcctcagggg 569
>gb|AF104020.1|AF104020 Bovine viral diarrhea virus-2 subgenome B polyprotein mRNA, partial cds Length = 1211 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 584 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 643 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 644 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 703 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 || | | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 704 gcggaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 763 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 764 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 823 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 824 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 883 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 884 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 942 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 943 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 1000 Score = 214 bits (108), Expect = 4e-52 Identities = 198/228 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 812 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 871 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 872 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 931 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 932 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 991 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 ||||||||| |||||||| || |||||||| ||||||||||| ||||| Sbjct: 992 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgg 1039 Score = 170 bits (86), Expect = 5e-39 Identities = 192/226 (84%), Gaps = 2/226 (0%) Strand = Plus / Plus Query: 433 tccaccctccacctggtgctccgcctcaggggtggtatgcagatcttcgtgaagaccctc 492 ||||| || |||||||| ||||||||||| ||||| ||||||||||||||||||||| | Sbjct: 549 tccactctgcacctggtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttg 608 Query: 493 accggcaagaccatcaccctggagggtgagtcttcggacaccatcgacaacgtcaaggcg 552 ||||||||||||||||||||||||| ||| | ||||||||||| ||||||||||| Sbjct: 609 accggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggcc 668 Query: 553 aagatccaggacaaggagggcattcccccggaccagcagcggcctcatntttgncgggca 612 |||||||| ||||| |||||||| ||||| ||||||| | || || || |||| |||| | Sbjct: 669 aagatccaagacaaagagggcatccccccagaccagcggagg-ctgatctttgccggg-a 726 Query: 613 agcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 727 aacagctggaagatggccgcaccctgtctgactacaacatccagaa 772
>gb|M62428.1|BOVPOUB Bovine polyubiquitin mRNA, 3' end, clone rpub1 Length = 789 Score = 347 bits (175), Expect = 4e-92 Identities = 359/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 261 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 320 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 321 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 380 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 381 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 440 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 441 catccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 500 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 501 cgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcga 560 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 561 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 619 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 620 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 677 Score = 339 bits (171), Expect = 9e-90 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | ||||||||||||||||| || ||||| ||| || Sbjct: 33 gatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggaggtggagcccag 92 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 93 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 152 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 153 gcagaggctaatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaa 212 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||| || |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 213 catccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatctt 272 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 273 cgtgaagaccttgaccggcaagaccatcactctggaggtggagcccagtgacaccatcga 332 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| || || | Sbjct: 333 gaacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagagg-ctga 391 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| |||| || ||||| || |||||||| ||||| ||| ||||||||||||||| Sbjct: 392 tctttgccggg-aaacagctggaagatggccgcaccctgtctgactacaacatccagaa 449 Score = 186 bits (94), Expect = 8e-44 Identities = 172/198 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | |||||||||||||||||||| ||||| ||| || Sbjct: 489 gatgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccag 548 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct: 549 tgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagacca 608 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 609 gcagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaa 668 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 669 catccagaaagagtccac 686 Score = 165 bits (83), Expect = 3e-37 Identities = 186/219 (84%), Gaps = 2/219 (0%) Strand = Plus / Plus Query: 442 cacctggtgctccgcctcaggggtggtatgcagatcttcgtgaagaccctcaccggcaag 501 |||||||| ||||||||||| ||||| ||||||||||||||||||||| | ||||||||| Sbjct: 7 cacctggtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaag 66 Query: 502 accatcaccctggagggtgagtcttcggacaccatcgacaacgtcaaggcgaagatccag 561 |||||||| ||||||| ||| | ||||||||||| ||||||||||| |||||||| Sbjct: 67 accatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggccaagatccaa 126 Query: 562 gacaaggagggcattcccccggaccagcagcggcctcatntttgncgggcaagcagcttg 621 ||||| |||||||| ||||| ||||||||| || || || |||| |||| || ||||| | Sbjct: 127 gacaaagagggcatccccccagaccagcagagg-ctaatctttgccggg-aaacagctgg 184 Query: 622 angatggccgaacccttgctgnctacaacatccagaagg 660 | ||||| || ||||| ||| ||||||||||||||||| Sbjct: 185 aagatgggcgcaccctgtctgactacaacatccagaagg 223
>gb|BC000379.2| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:8385 IMAGE:2820408), complete cds Length = 989 Score = 343 bits (173), Expect = 6e-91 Identities = 373/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| || | Sbjct: 139 atgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagt 198 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 199 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccccgaccag 258 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || |||||||| || ||| ||||||||||| Sbjct: 259 cagaggctcatctttgcaggcaagcagctggaagacggccgtactctttctgactacaac 318 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 319 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 378 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 379 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 438 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 439 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 497 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 498 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 556 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 557 agtcgaccctgcacctgg 574 Score = 319 bits (161), Expect = 8e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 367 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 426 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 427 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 486 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 487 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 546 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 547 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 606 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 607 gtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaa 666 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| ||||| ||||||||| || ||||| Sbjct: 667 aatgtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagagg-ctcat 725 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 726 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 782 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| || | Sbjct: 595 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 654 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || ||||||||||| |||||| Sbjct: 655 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 714 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 715 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 774 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 775 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 821
>ref|XM_858590.1| PREDICTED: Canis familiaris similar to ubiquitin B precursor, transcript variant 3 (LOC479513), mRNA Length = 743 Score = 343 bits (173), Expect = 6e-91 Identities = 358/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 100 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 159 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || ||||||||||| || |||||| Sbjct: 160 gacaccatcgaaaatgtgaaggccaagatccaggataaagagggcatcccgcctgaccag 219 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 220 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgattacaac 279 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| || ||||||||||| || ||||| ||||||||||||||||||||| Sbjct: 280 atccagaaagagtcaactctccacctggtcctgcgcctgaggggtggtatgcagatcttc 339 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 340 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgaa 399 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || |||||||| || || ||||||||| || ||||| Sbjct: 400 aatgtgaaggccaagatccaggataaagagggcatcccgcctgaccagcagagg-ctcat 458 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| |||||||||||||| Sbjct: 459 ctttg-caggcaagcagctggaagatggccgcactctttctgattacaacatccagaa 515 Score = 208 bits (105), Expect = 2e-50 Identities = 224/262 (85%), Gaps = 2/262 (0%) Strand = Plus / Plus Query: 397 ggccgcacccttgctgactacaacatccagaaggagtccaccctccacctggtgctccgc 456 |||||||| ||| |||| |||||||||||||| ||||| || ||||||||||| || ||| Sbjct: 28 ggccgcactctttctgattacaacatccagaaagagtcaactctccacctggtcctgcgc 87 Query: 457 ctcaggggtggtatgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggag 516 || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 88 ctgaggggtggtatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggag 147 Query: 517 ggtgagtcttcggacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcatt 576 | ||| | ||||||||||| || || ||||| ||||||||||| || |||||||| Sbjct: 148 gtggagcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaagagggcatc 207 Query: 577 cccccggaccagcagcggcctcatntttgncgggcaagcagcttgangatggccgaaccc 636 || || ||||||||| || ||||| |||| | ||||||||||| || |||||||| || | Sbjct: 208 ccgcctgaccagcagagg-ctcatctttg-caggcaagcagctggaagatggccgcactc 265 Query: 637 ttgctgnctacaacatccagaa 658 || ||| |||||||||||||| Sbjct: 266 tttctgattacaacatccagaa 287 Score = 204 bits (103), Expect = 3e-49 Identities = 196/227 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 328 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 387 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || ||||||||||| || |||||| Sbjct: 388 gacaccatcgaaaatgtgaaggccaagatccaggataaagagggcatcccgcctgaccag 447 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 448 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgattacaac 507 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| || ||||||||||| || ||||| |||||||| Sbjct: 508 atccagaaagagtcaactctccacctggtcctgcgcctgaggggtgg 554
>ref|XM_536651.2| PREDICTED: Canis familiaris similar to ubiquitin B precursor, transcript variant 1 (LOC479513), mRNA Length = 881 Score = 343 bits (173), Expect = 6e-91 Identities = 358/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 238 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 297 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || ||||||||||| || |||||| Sbjct: 298 gacaccatcgaaaatgtgaaggccaagatccaggataaagagggcatcccgcctgaccag 357 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 358 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgattacaac 417 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| || ||||||||||| || ||||| ||||||||||||||||||||| Sbjct: 418 atccagaaagagtcaactctccacctggtcctgcgcctgaggggtggtatgcagatcttc 477 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 478 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgaa 537 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || |||||||| || || ||||||||| || ||||| Sbjct: 538 aatgtgaaggccaagatccaggataaagagggcatcccgcctgaccagcagagg-ctcat 596 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| |||||||||||||| Sbjct: 597 ctttg-caggcaagcagctggaagatggccgcactctttctgattacaacatccagaa 653 Score = 327 bits (165), Expect = 3e-86 Identities = 356/418 (85%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||| |||||| ||||| ||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 10 atgccgatcttcgtgaaaaccctaaccggcaagaccatcaccctggaggtggagcccagt 69 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || ||||||||||| || |||||| Sbjct: 70 gacaccatcgaaaatgtgaaggccaagatccaggataaagagggcatcccgcctgaccag 129 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 130 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgattacaac 189 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| || ||||||||||| || ||||| ||||||||||||||||||||| Sbjct: 190 atccagaaagagtcaactctccacctggtcctgcgcctgaggggtggtatgcagatcttc 249 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 250 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgaa 309 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || |||||||| || || ||||||||| || ||||| Sbjct: 310 aatgtgaaggccaagatccaggataaagagggcatcccgcctgaccagcagagg-ctcat 368 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| |||||||||||||| Sbjct: 369 ctttg-caggcaagcagctggaagatggccgcactctttctgattacaacatccagaa 425 Score = 204 bits (103), Expect = 3e-49 Identities = 196/227 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 466 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 525 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || ||||||||||| || |||||| Sbjct: 526 gacaccatcgaaaatgtgaaggccaagatccaggataaagagggcatcccgcctgaccag 585 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| |||| |||||| Sbjct: 586 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgattacaac 645 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| || ||||||||||| || ||||| |||||||| Sbjct: 646 atccagaaagagtcaactctccacctggtcctgcgcctgaggggtgg 692
>emb|Z24723.1|PCUBIQGNA P.chrysosporium ubiquitin gene, complete CDS Length = 2054 Score = 343 bits (173), Expect = 6e-91 Identities = 308/353 (87%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| || ||||| ||||| |||||||| ||||| || Sbjct: 931 atgcagatcttcgtcaagaccctcacgggtaagacgatcactcttgaggtcgagtcgtcg 990 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||| Sbjct: 991 gacacgatcgacaacgtcaaggccaagattcaggacaaggagggcatccctccggatcag 1050 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||| ||||| || ||||||||||| || || |||||||| ||| | || ||||| Sbjct: 1051 cagcgcctgatcttcgccggcaagcagctcgaagatggccgcacgctttcggattacaat 1110 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||||||||| || || || || | |||||||||||||||||| Sbjct: 1111 atccagaaagagtctaccctccaccttgtccttcgtcttcgtggtggtatgcagatcttc 1170 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| | ||||||||||| ||||| || |||| ||||||||||||||||| ||| Sbjct: 1171 gtgaagacgttgaccggcaagacgatcacgctcgaggtcgagtcttcggacaccattgac 1230 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcg 593 |||||||||||||||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 1231 aacgtcaaggcgaagatccaagacaaggagggtattcccccagaccagcagcg 1283 Score = 281 bits (142), Expect = 2e-72 Identities = 190/206 (92%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||| ||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 373 atgcagatcttcgtgaagactctcacgggcaagaccatcaccctcgaggtcgagtcctct 432 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 433 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcatcccaccagaccag 492 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||| ||||||||||||||||| ||||||||||| | || |||||| Sbjct: 493 cagcgtctcatctttgccggcaagcagcttgaggatggccgcaccctctccgattacaac 552 Query: 421 atccagaaggagtccaccctccacct 446 |||||||||||||||||||||||||| Sbjct: 553 atccagaaggagtccaccctccacct 578 Score = 202 bits (102), Expect = 1e-48 Identities = 180/206 (87%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||| | ||||||||||| ||||| || ||||| ||||| || Sbjct: 1159 atgcagatcttcgtgaagacgttgaccggcaagacgatcacgctcgaggtcgagtcttcg 1218 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||||||||||||||||||||| ||||||||||| || ||||| |||||| Sbjct: 1219 gacaccattgacaacgtcaaggcgaagatccaagacaaggagggtattcccccagaccag 1278 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| ||||| |||||||| |||||||| ||||| ||| | ||||| ||| Sbjct: 1279 cagcgcctcatcttcgctggtaagcagctggaggacggtcgcactctttcggactataac 1338 Query: 421 atccagaaggagtccaccctccacct 446 |||||||||||||| ||||| ||||| Sbjct: 1339 atccagaaggagtctacccttcacct 1364 Score = 190 bits (96), Expect = 5e-45 Identities = 168/192 (87%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| |||||||| ||||| |||||||||||||| || ||||| ||||||||||| || Sbjct: 1439 atgcaaatctttgttaagacgctcaccggcaagacgattaccctcgaggttgagtcttcc 1498 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||||||||||||||||||||| |||||||| |||||||| |||||||| || |||||| Sbjct: 1499 gacacgatcgacaacgtcaaggcaaagatccaagacaaggaaggcatcccgcccgaccag 1558 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||| || |||||||| || |||||||| || ||||| | ||||||||| Sbjct: 1559 cagcgtctgatcttcgccggcaagcaactcgaggacgggcgtaccctctccgactacaac 1618 Query: 421 atccagaaggag 432 |||||||||||| Sbjct: 1619 atccagaaggag 1630 Score = 190 bits (96), Expect = 5e-45 Identities = 169/192 (88%), Gaps = 2/192 (1%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 |||||||||||||||||||| ||||| ||||||||||||||||| |||| ||||| || Sbjct: 373 atgcagatcttcgtgaagactctcacgggcaagaccatcaccctcgaggtcgagtcctct 432 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 ||||||||||||||||||||||| ||||||||||||||||||||||| || || |||||| Sbjct: 433 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcatcccaccagaccag 492 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 |||| | ||||| |||| | |||||||||||||| |||||||| ||||| | | |||| Sbjct: 493 cagc-gtctcatctttgcc-ggcaagcagcttgaggatggccgcaccctctccgattaca 550 Query: 649 acatccagaagg 660 |||||||||||| Sbjct: 551 acatccagaagg 562 Score = 180 bits (91), Expect = 5e-42 Identities = 175/203 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| |||||||| || |||||||||||||| || ||||| ||||| || Sbjct: 653 atgcagatctttgtcaagaccctgacgggcaagaccatcacgctcgaggtcgagtcttcc 712 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| ||||||||||||||||| ||||| || ||||||||| Sbjct: 713 gacaccattgataatgtgaaggccaagatccaggacaaggaaggcattcctccggaccag 772 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||||||||||||||| ||||||||||| || | | || |||||| Sbjct: 773 cagcgtctcatctttgctggcaagcagctcgaggacggccgtacgttgtccgattacaac 832 Query: 421 atccagaaggagtccaccctcca 443 |||||||||||||| || ||||| Sbjct: 833 atccagaaggagtctactctcca 855 Score = 137 bits (69), Expect = 7e-29 Identities = 143/166 (86%), Gaps = 2/166 (1%) Strand = Plus / Plus Query: 466 ggtatgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtct 525 ||||||||||||||||| ||||||||||| || ||||| ||||| || |||| ||||| Sbjct: 928 ggtatgcagatcttcgtcaagaccctcacgggtaagacgatcactcttgaggtcgagtcg 987 Query: 526 tcggacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggac 585 |||||||| ||||||||||||||||| ||||| ||||||||||||||||| || ||||| Sbjct: 988 tcggacacgatcgacaacgtcaaggccaagattcaggacaaggagggcatccctccggat 1047 Query: 586 cagcagcggcctcatntttgncgggcaagcagcttgangatggccg 631 ||||||| |||| || || | | ||||||||||| || |||||||| Sbjct: 1048 cagcagc-gcctgatcttcgcc-ggcaagcagctcgaagatggccg 1091 Score = 125 bits (63), Expect = 3e-25 Identities = 114/131 (87%) Strand = Plus / Plus Query: 463 ggtggtatgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgag 522 ||||| ||||| ||||| || ||||| |||||||||||||| || ||||| |||| |||| Sbjct: 1433 ggtggcatgcaaatctttgttaagacgctcaccggcaagacgattaccctcgaggttgag 1492 Query: 523 tcttcggacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccg 582 ||||| ||||| ||||||||||||||||| |||||||| |||||||| ||||| || || Sbjct: 1493 tcttccgacacgatcgacaacgtcaaggcaaagatccaagacaaggaaggcatcccgccc 1552 Query: 583 gaccagcagcg 593 ||||||||||| Sbjct: 1553 gaccagcagcg 1563 Score = 125 bits (63), Expect = 3e-25 Identities = 123/143 (86%) Strand = Plus / Plus Query: 451 ctccgcctcaggggtggtatgcagatcttcgtgaagaccctcaccggcaagaccatcacc 510 ||||| ||| |||| || ||||||||||| || |||||||| || |||||||||||||| Sbjct: 635 ctccgtctccggggcggcatgcagatctttgtcaagaccctgacgggcaagaccatcacg 694 Query: 511 ctggagggtgagtcttcggacaccatcgacaacgtcaaggcgaagatccaggacaaggag 570 || |||| |||||||| |||||||| || || || ||||| ||||||||||||||||| Sbjct: 695 ctcgaggtcgagtcttccgacaccattgataatgtgaaggccaagatccaggacaaggaa 754 Query: 571 ggcattcccccggaccagcagcg 593 |||||||| |||||||||||||| Sbjct: 755 ggcattcctccggaccagcagcg 777
>dbj|AB071067.1| Macaca fascicularis testis cDNA clone:QtsA-16192, similar to human ubiquitin B precursor ( UBB ), mRNA, NM_018955.1 Length = 883 Score = 343 bits (173), Expect = 6e-91 Identities = 373/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 265 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 324 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 325 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 384 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 385 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 444 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || ||||| || |||||||||||||||||| Sbjct: 445 atccagaaggagtcgaccctgcacctggtcctgcgcctgagaggtggtatgcagatcttc 504 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||| ||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 505 gtgaaaaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgaa 564 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| ||||| ||||||||| || ||||| Sbjct: 565 aatgtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagagg-ctcat 623 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 624 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 682 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 683 agtcaaccctgcacctgg 700 Score = 335 bits (169), Expect = 1e-88 Identities = 372/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||||||||| ||| || | Sbjct: 37 atgcagatcttcgtgaagaccctgaccggcaagaccatcacccttgaggtggagcccagt 96 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| || |||||||| ||||| ||||| ||||| |||||| Sbjct: 97 gacaccatcgaaaatgtgaaggccaaaatccaggataaggaaggcattccccccgaccag 156 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 157 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 216 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| ||||| || || ||||| || |||||||||||||||||| Sbjct: 217 atccagaaagagtcgaccctgcaccttgtcctgcgcctgagaggtggtatgcagatcttc 276 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 277 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 336 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 337 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 395 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 396 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 454 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 455 agtcgaccctgcacctgg 472 Score = 204 bits (103), Expect = 3e-49 Identities = 196/227 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 493 atgcagatcttcgtgaaaaccctgaccggcaagaccatcaccctggaggtggagcccagt 552 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || ||||||||||| |||||| Sbjct: 553 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 612 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 613 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 672 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||||||||| ||||| |||||||| || ||||| |||||||| Sbjct: 673 atccagaaggagtcaaccctgcacctggtcctgcgcctgaggggtgg 719
>gb|AY891423.1| Synthetic construct Homo sapiens clone FLH017070.01L ubiquitin B (UBB) mRNA, partial cds Length = 690 Score = 343 bits (173), Expect = 6e-91 Identities = 373/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| || | Sbjct: 1 atgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagt 60 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 61 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccccgaccag 120 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || |||||||| || ||| ||||||||||| Sbjct: 121 cagaggctcatctttgcaggcaagcagctggaagacggccgtactctttctgactacaac 180 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 181 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 240 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 241 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 300 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 301 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 359 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 360 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 418 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 419 agtcgaccctgcacctgg 436 Score = 319 bits (161), Expect = 8e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 229 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 288 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 289 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 348 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 349 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 408 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 409 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 468 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 469 gtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaa 528 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| ||||| ||||||||| || ||||| Sbjct: 529 aatgtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagagg-ctcat 587 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 588 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 644 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| || | Sbjct: 457 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 516 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || ||||||||||| |||||| Sbjct: 517 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 576 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 577 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 636 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 637 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 683
>gb|AY888785.1| Synthetic construct Homo sapiens clone FLH017074.01X ubiquitin B (UBB) mRNA, complete cds Length = 690 Score = 343 bits (173), Expect = 6e-91 Identities = 373/438 (85%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| || | Sbjct: 1 atgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagt 60 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 61 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccccgaccag 120 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || |||||||| || ||| ||||||||||| Sbjct: 121 cagaggctcatctttgcaggcaagcagctggaagacggccgtactctttctgactacaac 180 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 181 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 240 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 241 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 300 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 301 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 359 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 360 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 418 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 419 agtcgaccctgcacctgg 436 Score = 319 bits (161), Expect = 8e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 229 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 288 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 289 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 348 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 349 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 408 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 409 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 468 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 469 gtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaa 528 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| ||||| ||||||||| || ||||| Sbjct: 529 aatgtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagagg-ctcat 587 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 588 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 644 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| || | Sbjct: 457 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 516 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || ||||||||||| |||||| Sbjct: 517 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 576 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 577 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 636 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 637 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 683
>gb|DQ216253.1| Taeniopygia guttata clone 0058P0031B03 ubiquitin C variant 14-like mRNA, complete sequence Length = 1327 Score = 341 bits (172), Expect = 2e-90 Identities = 360/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| |||||||||||||||||||| || |||||| || Sbjct: 524 gatgcagatctttgtgaagaccctgaccggcaagaccatcaccctggaagttgagcccag 583 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| || || || |||||||| ||||||||||||||||| || ||||| || ||||| Sbjct: 584 cgacaccattgaaaatgtcaaggccaagatccaggacaaggaaggtatccctcctgacca 643 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||||||||||||||| || || || |||||||| | |||||||| Sbjct: 644 gcagaggctgatctttgctggcaagcagctggaagatgggcgcaccctctcagactacaa 703 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct: 704 catccagaaggaatccaccctgcacctggtgctgcgcctcaggggtgggatgcagatctt 763 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||| |||||||| || |||||||||||||||||||| | |||| | ||||||||||| Sbjct: 764 cgtcaagaccctgactggcaagaccatcaccctggaagttgagcccagcgacaccatcga 823 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||| ||||| ||||||||||| ||||||||| || || | Sbjct: 824 gaatgtcaaggccaagatccaggataaggaaggcattcccccagaccagcagagg-ctga 882 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | ||| | ||||||||||| || ||||| || |||||| | | ||||||||||||||| Sbjct: 883 t-tttcgctggcaagcagctggaagatgggcgcaccctttccgattacaacatccagaag 941 Query: 660 g 660 | Sbjct: 942 g 942 Score = 325 bits (164), Expect = 1e-85 Identities = 358/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| |||||||||||||||||||| || |||||| || Sbjct: 296 gatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagttgagcccag 355 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || || ||||| |||||||||||||||||||||||||| || ||||| Sbjct: 356 tgacaccattgaaaatgtgaaggccaagatccaggacaaggagggcatccctcctgacca 415 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || ||||||||||| |||||||| ||||| || |||||||| | |||||||| Sbjct: 416 gcagaggctgatctttgctggtaagcagctggaggatgggcgcaccctctccgactacaa 475 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 476 catccagaaggaatccaccctgcacctggtgctgcgcctgagaggtgggatgcagatctt 535 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| ||||||||||||||||||||||| | |||| | |||||||| || Sbjct: 536 tgtgaagaccctgaccggcaagaccatcaccctggaagttgagcccagcgacaccattga 595 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||| || || || || ||||||||| || || | Sbjct: 596 aaatgtcaaggccaagatccaggacaaggaaggtatccctcctgaccagcagagg-ctga 654 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || ||||| || ||||| | | |||||||||||||||| Sbjct: 655 tctttg-ctggcaagcagctggaagatgggcgcaccctctcagactacaacatccagaag 713 Query: 660 g 660 | Sbjct: 714 g 714 Score = 315 bits (159), Expect = 1e-82 Identities = 356/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||||||||| ||| || | Sbjct: 69 atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggtggagcccagt 128 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 129 gacaccattgaaaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || |||||||| || || ||||||||||| | ||||||||| Sbjct: 189 cagaggctgatctttgccggtaagcagctggaagatggccgcaccctgtccgactacaac 248 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 || ||||||||||| || || ||||||||||| ||||| || ||||| |||||||||||| Sbjct: 249 attcagaaggagtcaactctgcacctggtgctgcgcctgagaggtgggatgcagatcttc 308 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | |||| | |||||||| || Sbjct: 309 gtgaagaccctgaccggcaagaccatcaccctggaagttgagcccagtgacaccattgaa 368 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||||||||| || || ||||||||| || || || Sbjct: 369 aatgtgaaggccaagatccaggacaaggagggcatccctcctgaccagcagagg-ctgat 427 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | || |||||||| || ||||| || ||||| | | ||||||||||||||||| Sbjct: 428 ctttg-ctggtaagcagctggaggatgggcgcaccctctccgactacaacatccagaagg 486 Score = 190 bits (96), Expect = 5e-45 Identities = 195/228 (85%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| || |||||||| || ||||||||||||||||| || |||||| || Sbjct: 752 gatgcagatcttcgtcaagaccctgactggcaagaccatcaccctggaagttgagcccag 811 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| ||||| || |||||||| ||||||||||| ||||| ||||| ||||| ||||| Sbjct: 812 cgacaccatcgagaatgtcaaggccaagatccaggataaggaaggcattcccccagacca 871 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || || || |||||||||||||| || || || ||||||||| | || ||||| Sbjct: 872 gcagaggctgattttcgctggcaagcagctggaagatgggcgcaccctttccgattacaa 931 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 932 catccagaaggaatccaccctgcacctggtgctgcgcctcaggggtgg 979
>gb|DQ216235.1| Taeniopygia guttata clone 0058P0048G02 ubiquitin C variant 1-like mRNA, complete sequence Length = 1305 Score = 339 bits (171), Expect = 9e-90 Identities = 359/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| || | Sbjct: 69 atgcagatctttgtgaagaccctgaccggcaagaccatcacccttgaggtggagcccagt 128 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 129 gacaccattgaaaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| ||||| || |||||||| | ||| ||||| Sbjct: 189 cagaggctgatctttgctggcaagcagctggaggatgggcgcaccctctccgacgacaac 248 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| || |||||||||||||| |||||||| ||||| |||||||||||| Sbjct: 249 atccagaaagagtcaactctccacctggtgctgcgcctcagaggtgggatgcagatcttc 308 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||| ||||| || |||||||||||||| || |||| ||| | ||||||||||| Sbjct: 309 gtgaaaaccctgactggcaagaccatcactctcgaggtggagcccagtgacaccatcgag 368 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||| || ||||| || ||||||||| || || || Sbjct: 369 aatgtcaaggccaagatccaggacaaggaaggtattcctcctgaccagcagagg-ctgat 427 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || ||||| || ||||| ||| ||||||||||||||||| Sbjct: 428 ctttg-ctggcaagcagctggaagatgggcgcaccctgtctgactacaacatccagaagg 486 Score = 297 bits (150), Expect = 3e-77 Identities = 285/330 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||| ||||| || |||||||||||||| || ||||| ||| || Sbjct: 296 gatgcagatcttcgtgaaaaccctgactggcaagaccatcactctcgaggtggagcccag 355 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||| || || || || ||||| Sbjct: 356 tgacaccatcgagaatgtcaaggccaagatccaggacaaggaaggtattcctcctgacca 415 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||||||||||||||| || || || |||||||| |||||||||| Sbjct: 416 gcagaggctgatctttgctggcaagcagctggaagatgggcgcaccctgtctgactacaa 475 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||||||||| |||||||| ||||| ||||||||||| Sbjct: 476 catccagaaggaatccaccctgcacctggtgctgcgcctcagaggtgggatgcagatctt 535 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||| |||||||| || |||||||||||||||||||| | |||| | ||||||||||| Sbjct: 536 cgtcaagaccctgacgggcaagaccatcaccctggaagttgagcccagtgacaccatcga 595 Query: 540 caacgtcaaggcgaagatccaggacaagga 569 ||||||||||| ||||||||||||||||| Sbjct: 596 gaacgtcaaggccaagatccaggacaagga 625 Score = 274 bits (138), Expect = 4e-70 Identities = 353/422 (83%), Gaps = 3/422 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| || |||||||| || ||||||||||||||||| || |||||| || Sbjct: 524 gatgcagatcttcgtcaagaccctgacgggcaagaccatcaccctggaagttgagcccag 583 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| ||||||||||||||||| || ||||| || || || Sbjct: 584 tgacaccatcgagaacgtcaaggccaagatccaggacaaggaaggtatccctccagatca 643 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||||||||||||||| ||||| || |||||||| | |||||||| Sbjct: 644 gcagaggctgatctttgctggcaagcagctggaggatgggcgcaccctgtccgactacaa 703 Query: 420 catccag-aaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 ||| ||| || ||||| || || ||||| || || ||||| || ||||| |||||||||| Sbjct: 704 cattcagaaangagtcaactctgcaccttgtcctgcgcctgagaggtggcatgcagatct 763 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | ||||||||||| || |||||||||||||||||||| | |||| | |||||||| | Sbjct: 764 ttgtgaagaccctgactggcaagaccatcaccctggaagttgagcccagcgacaccattg 823 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 | || || ||||| ||||||||||||||||||||||||||||| ||||||||| || || Sbjct: 824 aaaatgtgaaggccaagatccaggacaaggagggcattcccccagaccagcagagg-ctg 882 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| | ||||||||||| || ||||| || ||||| | | ||| ||||||||||| Sbjct: 883 atttttg-ctggcaagcagctggaagatgggcgcaccctctccgactataacatccagaa 941 Query: 659 gg 660 || Sbjct: 942 gg 943 Score = 204 bits (103), Expect = 3e-49 Identities = 196/227 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| || |||||| || Sbjct: 754 atgcagatctttgtgaagaccctgactggcaagaccatcaccctggaagttgagcccagc 813 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 814 gacaccattgaaaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 873 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || || ||||||||||||||||| || || || |||||||| | ||||| ||| Sbjct: 874 cagaggctgatttttgctggcaagcagctggaagatgggcgcaccctctccgactataac 933 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 ||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 934 atccagaaggaatccaccctgcacctggtgctgcgcctcaggggtgg 980
>gb|AC137606.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0004B23, complete sequence Length = 153136 Score = 339 bits (171), Expect = 9e-90 Identities = 359/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| ||||| |||||||| ||||| |||||||| || |||||||| ||||| ||| Sbjct: 30623 atgcagatttttgtcaagaccctgaccggaaagaccattacgcttgaggtcgagtcttct 30564 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || ||| |||| | ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 30563 gatacaatcaacaatgagaaggcgaagatttaggacaaggagggcatccccccggaccag 30504 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| || ||||||||||| ||||||| |||||||| ||||||||||| Sbjct: 30503 cagcgcctcatcttcgccggcaagcagctcaaggacggacgcaccctggctgactacaat 30444 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| ||||| |||||| | ||||||||||| ||||| ||||| Sbjct: 30443 atccagaaggagtctacccttcacctagtgctcaggctcaggggtggaatgcaaatcttt 30384 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| | |||||||| ||||| ||| |||||| |||||| |||||||| || ||| Sbjct: 30383 gtcaagacattgaccggcaaaaccattaccttggaggttgagtcgtcggacacaattgac 30324 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| || || ||||| |||||||||||||||||||||||||| |||||||| | | || Sbjct: 30323 aacgtgaaagcaaagattcaggacaaggagggcattcccccggatcagcagcgac-tgat 30265 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||| | || | |||||||||||||||| Sbjct: 30264 ctttg-ctggcaagcagctcgaggatggccgcaccttagcaggttacaacatccagaagg 30206 Score = 280 bits (141), Expect = 7e-72 Identities = 349/416 (83%), Gaps = 10/416 (2%) Strand = Plus / Minus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||||||||||||||| ||||| ||||| ||||| | ||||||||||| Sbjct: 31077 agatgcagatctttgtgaagacactcactggcaataccataa-------ggttgagtcct 31025 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 |||||||||| ||||| |||||||| ||||| |||||||||||||| || || || |||| Sbjct: 31024 ctgacacgattgacaatgtcaaggccaagattcaggacaaggagggtattccacctgacc 30965 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||||||||||||||| |||||||| ||||||||||| |||||||| || || |||| Sbjct: 30964 agcagcgcctcatctttgcgggcaagcaacttgaggacggacgcaccctcgcagattaca 30905 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||| ||||| ||||||||||||||||| || || ||||||||||| || |||||||||| Sbjct: 30904 acattcagaaagagtccaccctccaccttgtccttcgcctcaggggaggaatgcagatct 30845 Query: 479 tcgtgaagaccctcaccggcaaga-ccatcaccctggagggtgagtcttcggacaccatc 537 | ||||||||| | || | |||| ||||||| |||||| |||||| || ||||| || Sbjct: 30844 ttgtgaagaccttgacaagaaagacccatcactttggaggttgagtcctcagacacgatt 30785 Query: 538 gacaacgtcaaggcgaagatccaggacaaggagggcat-tcccccggaccagcagcggcc 596 |||||||| ||||| ||||||||||| |||||| | || ||||| ||||||||||| | Sbjct: 30784 gacaacgtgaaggcaaagatccaggataaggagtgtatccccccctgaccagcagcgtct 30725 Query: 597 tcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacat 652 | || |||| | |||||||||||||| ||||| || ||| | || | ||||||||| Sbjct: 30724 ttatctttg-ctggcaagcagcttgaggatggtcggaccttggcggactacaacat 30670 Score = 220 bits (111), Expect = 6e-54 Identities = 349/423 (82%), Gaps = 5/423 (1%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagacc-atcacccttgaggttgagtcctc 299 ||||||||||||||||||||| | || | |||||| ||||| | |||||||||||||| Sbjct: 30854 atgcagatctttgtgaagaccttgacaagaaagacccatcactttggaggttgagtcctc 30795 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccg-gacc 358 |||||||| |||||||| ||||| ||||||||||| |||||| | |||||||| |||| Sbjct: 30794 agacacgattgacaacgtgaaggcaaagatccaggataaggagtgtatccccccctgacc 30735 Query: 359 agcagcgcctc-atctttgctggcaagcagcttgaggacggccgcacccttgctgactac 417 ||||||| || |||||||||||||||||||||||||| || || ||| | || |||||| Sbjct: 30734 agcagcgtctttatctttgctggcaagcagcttgaggatggtcggaccttggcggactac 30675 Query: 418 aacatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatc 477 ||||| |||| |||||||| || ||||| ||||| | | ||||| || |||||||| Sbjct: 30674 aacatttagaaagagtccactcttcaccttgtgcttaggttgaggggaggcatgcagatt 30615 Query: 478 ttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatc 537 || || |||||||| ||||| |||||||| || || |||| |||||||| || || ||| Sbjct: 30614 tttgtcaagaccctgaccggaaagaccattacgcttgaggtcgagtcttctgatacaatc 30555 Query: 538 gacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcct 597 |||| | ||||||||||| |||||||||||||||| |||||||||||||||| |||| Sbjct: 30554 aacaatgagaaggcgaagatttaggacaaggagggcatccccccggaccagcagc-gcct 30496 Query: 598 catntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccaga 657 ||| || | | ||||||||||| | || || || ||||| |||| |||||| ||||||| Sbjct: 30495 catcttcgcc-ggcaagcagctcaaggacggacgcaccctggctgactacaatatccaga 30437 Query: 658 agg 660 ||| Sbjct: 30436 agg 30434 Score = 180 bits (91), Expect = 5e-42 Identities = 184/215 (85%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| |||||||| ||||| | |||||||| ||||| ||| | ||||||||||| || Sbjct: 30395 atgcaaatctttgtcaagacattgaccggcaaaaccattaccttggaggttgagtcgtcg 30336 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || |||||||| || || ||||| ||||||||||||||||| |||||||| ||| Sbjct: 30335 gacacaattgacaacgtgaaagcaaagattcaggacaaggagggcattcccccggatcag 30276 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || |||||||||||||||||||| ||||| ||||||||| | || | |||||| Sbjct: 30275 cagcgactgatctttgctggcaagcagctcgaggatggccgcaccttagcaggttacaac 30216 Query: 421 atccagaaggagtccaccctccacctggtgctccg 455 |||||||||||||||||| | ||||||| |||||| Sbjct: 30215 atccagaaggagtccaccttgcacctggcgctccg 30181
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 339 bits (171), Expect = 9e-90 Identities = 359/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| ||||| |||||||| ||||| |||||||| || |||||||| ||||| ||| Sbjct: 8545051 atgcagatttttgtcaagaccctgaccggaaagaccattacgcttgaggtcgagtcttct 8544992 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || ||| |||| | ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 8544991 gatacaatcaacaatgagaaggcgaagatttaggacaaggagggcatccccccggaccag 8544932 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| || ||||||||||| ||||||| |||||||| ||||||||||| Sbjct: 8544931 cagcgcctcatcttcgccggcaagcagctcaaggacggacgcaccctggctgactacaat 8544872 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| ||||| |||||| | ||||||||||| ||||| ||||| Sbjct: 8544871 atccagaaggagtctacccttcacctagtgctcaggctcaggggtggaatgcaaatcttt 8544812 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| | |||||||| ||||| ||| |||||| |||||| |||||||| || ||| Sbjct: 8544811 gtcaagacattgaccggcaaaaccattaccttggaggttgagtcgtcggacacaattgac 8544752 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| || || ||||| |||||||||||||||||||||||||| |||||||| | | || Sbjct: 8544751 aacgtgaaagcaaagattcaggacaaggagggcattcccccggatcagcagcgac-tgat 8544693 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||| | || | |||||||||||||||| Sbjct: 8544692 ctttg-ctggcaagcagctcgaggatggccgcaccttagcaggttacaacatccagaagg 8544634 Score = 280 bits (141), Expect = 7e-72 Identities = 349/416 (83%), Gaps = 10/416 (2%) Strand = Plus / Minus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 |||||||||||||||||||||| ||||| ||||| ||||| | ||||||||||| Sbjct: 8545505 agatgcagatctttgtgaagacactcactggcaataccataa-------ggttgagtcct 8545453 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 |||||||||| ||||| |||||||| ||||| |||||||||||||| || || || |||| Sbjct: 8545452 ctgacacgattgacaatgtcaaggccaagattcaggacaaggagggtattccacctgacc 8545393 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||||||||||||||||| |||||||| ||||||||||| |||||||| || || |||| Sbjct: 8545392 agcagcgcctcatctttgcgggcaagcaacttgaggacggacgcaccctcgcagattaca 8545333 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||| ||||| ||||||||||||||||| || || ||||||||||| || |||||||||| Sbjct: 8545332 acattcagaaagagtccaccctccaccttgtccttcgcctcaggggaggaatgcagatct 8545273 Query: 479 tcgtgaagaccctcaccggcaaga-ccatcaccctggagggtgagtcttcggacaccatc 537 | ||||||||| | || | |||| ||||||| |||||| |||||| || ||||| || Sbjct: 8545272 ttgtgaagaccttgacaagaaagacccatcactttggaggttgagtcctcagacacgatt 8545213 Query: 538 gacaacgtcaaggcgaagatccaggacaaggagggcat-tcccccggaccagcagcggcc 596 |||||||| ||||| ||||||||||| |||||| | || ||||| ||||||||||| | Sbjct: 8545212 gacaacgtgaaggcaaagatccaggataaggagtgtatccccccctgaccagcagcgtct 8545153 Query: 597 tcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacat 652 | || |||| | |||||||||||||| ||||| || ||| | || | ||||||||| Sbjct: 8545152 ttatctttg-ctggcaagcagcttgaggatggtcggaccttggcggactacaacat 8545098 Score = 280 bits (141), Expect = 7e-72 Identities = 201/221 (90%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 ||||||||||||| ||||||||||| || || ||||||||||| || ||||| ||||||| Sbjct: 3475015 agatgcagatcttcgtgaagaccctgacggggaagaccatcacgctggaggtggagtcct 3475074 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 | ||||| ||||||||||| ||||| ||||||||||||||||| || ||||||||||||| Sbjct: 3475075 cggacaccatcgacaacgtgaaggccaagatccaggacaaggaagggatccccccggacc 3475134 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 |||||||||||||||| || ||||||||||| ||||| ||||||||||| || ||||||| Sbjct: 3475135 agcagcgcctcatcttcgccggcaagcagctcgaggatggccgcaccctcgccgactaca 3475194 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctc 459 |||||||||||||||||||||||||||| |||||||||||| Sbjct: 3475195 acatccagaaggagtccaccctccacctcgtgctccgcctc 3475235 Score = 220 bits (111), Expect = 6e-54 Identities = 349/423 (82%), Gaps = 5/423 (1%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagacc-atcacccttgaggttgagtcctc 299 ||||||||||||||||||||| | || | |||||| ||||| | |||||||||||||| Sbjct: 8545282 atgcagatctttgtgaagaccttgacaagaaagacccatcactttggaggttgagtcctc 8545223 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccg-gacc 358 |||||||| |||||||| ||||| ||||||||||| |||||| | |||||||| |||| Sbjct: 8545222 agacacgattgacaacgtgaaggcaaagatccaggataaggagtgtatccccccctgacc 8545163 Query: 359 agcagcgcctc-atctttgctggcaagcagcttgaggacggccgcacccttgctgactac 417 ||||||| || |||||||||||||||||||||||||| || || ||| | || |||||| Sbjct: 8545162 agcagcgtctttatctttgctggcaagcagcttgaggatggtcggaccttggcggactac 8545103 Query: 418 aacatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatc 477 ||||| |||| |||||||| || ||||| ||||| | | ||||| || |||||||| Sbjct: 8545102 aacatttagaaagagtccactcttcaccttgtgcttaggttgaggggaggcatgcagatt 8545043 Query: 478 ttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatc 537 || || |||||||| ||||| |||||||| || || |||| |||||||| || || ||| Sbjct: 8545042 tttgtcaagaccctgaccggaaagaccattacgcttgaggtcgagtcttctgatacaatc 8544983 Query: 538 gacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcct 597 |||| | ||||||||||| |||||||||||||||| |||||||||||||||| |||| Sbjct: 8544982 aacaatgagaaggcgaagatttaggacaaggagggcatccccccggaccagcagc-gcct 8544924 Query: 598 catntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccaga 657 ||| || | | ||||||||||| | || || || ||||| |||| |||||| ||||||| Sbjct: 8544923 catcttcgcc-ggcaagcagctcaaggacggacgcaccctggctgactacaatatccaga 8544865 Query: 658 agg 660 ||| Sbjct: 8544864 agg 8544862 Score = 190 bits (96), Expect = 5e-45 Identities = 169/192 (88%), Gaps = 2/192 (1%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||||||||||||||||||||| || || ||||||||||| ||||||| ||||| ||| Sbjct: 3475017 atgcagatcttcgtgaagaccctgacggggaagaccatcacgctggaggtggagtcctcg 3475076 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 ||||||||||||||||| ||||| ||||||||||||||||| || || |||||||||||| Sbjct: 3475077 gacaccatcgacaacgtgaaggccaagatccaggacaaggaagggatccccccggaccag 3475136 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 |||| ||||||| || | | ||||||||||| || |||||||| ||||| || | ||||| Sbjct: 3475137 cagc-gcctcatcttcgcc-ggcaagcagctcgaggatggccgcaccctcgccgactaca 3475194 Query: 649 acatccagaagg 660 |||||||||||| Sbjct: 3475195 acatccagaagg 3475206 Score = 180 bits (91), Expect = 5e-42 Identities = 184/215 (85%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| |||||||| ||||| | |||||||| ||||| ||| | ||||||||||| || Sbjct: 8544823 atgcaaatctttgtcaagacattgaccggcaaaaccattaccttggaggttgagtcgtcg 8544764 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || |||||||| || || ||||| ||||||||||||||||| |||||||| ||| Sbjct: 8544763 gacacaattgacaacgtgaaagcaaagattcaggacaaggagggcattcccccggatcag 8544704 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || |||||||||||||||||||| ||||| ||||||||| | || | |||||| Sbjct: 8544703 cagcgactgatctttgctggcaagcagctcgaggatggccgcaccttagcaggttacaac 8544644 Query: 421 atccagaaggagtccaccctccacctggtgctccg 455 |||||||||||||||||| | ||||||| |||||| Sbjct: 8544643 atccagaaggagtccaccttgcacctggcgctccg 8544609 Score = 107 bits (54), Expect = 6e-20 Identities = 99/114 (86%) Strand = Plus / Minus Query: 346 atccccccggaccagcagcgcctcatctttgctggcaagcagcttgaggacggccgcacc 405 ||||| ||||| |||||||| |||||||| || || |||||||| || |||||| |||| Sbjct: 22310869 atcccgccggatcagcagcggctcatcttcgcggggaagcagctggaagacggctgcacg 22310810 Query: 406 cttgctgactacaacatccagaaggagtccaccctccacctggtgctccgcctc 459 || || ||||||||||||||||||||||| || || |||||||||||||||||| Sbjct: 22310809 ctggccgactacaacatccagaaggagtcgacgcttcacctggtgctccgcctc 22310756 Score = 58.0 bits (29), Expect = 5e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaagga 569 |||||||| |||||||||||||| |||||||| |||||||| Sbjct: 22312090 gacaccatagacaacgtcaaggccaagatccaagacaagga 22312050 Score = 50.1 bits (25), Expect = 0.012 Identities = 37/41 (90%) Strand = Plus / Minus Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaagga 341 ||||| || |||||||||||||| |||||||| |||||||| Sbjct: 22312090 gacaccatagacaacgtcaaggccaagatccaagacaagga 22312050
>gb|AF502576.1| Musa acuminata ubiquitin (UBQ2) gene, complete cds Length = 1602 Score = 339 bits (171), Expect = 9e-90 Identities = 359/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| |||||||| || || ||||| || ||||| ||||||||||||||||| |||||| Sbjct: 1 atgcaaatctttgtcaaaactctcactggaaagacgatcacccttgaggttgaatcctct 60 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| ||||| || ||||||||||| |||||||| || |||||||||||| Sbjct: 61 gacacaatcgacaatgtcaaagccaagatccaggataaggagggaatacccccggaccag 120 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 || | | || |||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 121 caaaggttgatatttgctggcaagcaacttgaggatggccgcacccttgctgactacaac 180 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||| |||||||||||||||||||| || ||||||||| | ||||| ||||| ||||| Sbjct: 181 atccaaaaggagtccaccctccaccttgtactccgcctccgtggtggcatgcaaatcttt 240 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || || || |||||||| |||||||||||||| |||| ||| || || |||||||| ||| Sbjct: 241 gtcaaaactctcaccggaaagaccatcacccttgaggttgaatcctctgacaccattgac 300 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||| |||||||||||||| ||||| || ||||| Sbjct: 301 aatgtcaaggccaagatccaggacaaggaaggcattcccccggatcagcaaagg-ctcat 359 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||| ||||| || |||||||| ||| | || | |||||| |||||||||| Sbjct: 360 cttcg-ctggcaaacagctcgaggatggccgcaccttggccgactacaatatccagaagg 418 Score = 315 bits (159), Expect = 1e-82 Identities = 356/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| |||||||| || || |||||||| ||||||||||||||||||||||| |||||| Sbjct: 229 atgcaaatctttgtcaaaactctcaccggaaagaccatcacccttgaggttgaatcctct 288 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| |||||||| ||||||||||||||||| ||||| |||||||| ||| Sbjct: 289 gacaccattgacaatgtcaaggccaagatccaggacaaggaaggcattcccccggatcag 348 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 || | |||||||| |||||||| ||||| ||||| ||||||||| | || |||||||| Sbjct: 349 caaaggctcatcttcgctggcaaacagctcgaggatggccgcaccttggccgactacaat 408 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||||||||| |||||||| ||| | ||||| |||||||| || Sbjct: 409 atccagaaggagtcgaccctccaccttgtgctccgtctccgtggtggcatgcagattttt 468 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| || || || |||||||| ||||| |||| |||| ||||||||||| ||| Sbjct: 469 gttaagacacttactggtaagaccattacccttgaggttgagagctcggacaccatagac 528 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||||||||| ||||||||||| || ||||| || ||||| Sbjct: 529 aatgtcaaggccaagatccaggacaaggaaggcattcccccagatcagcaaagg-ctcat 587 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| ||| | || | |||||| |||||||||| Sbjct: 588 cttcg-ctggcaagcagctcgaggatggccgtaccttggccgactacaatatccagaagg 646 Score = 297 bits (150), Expect = 3e-77 Identities = 300/350 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| ||||| ||||| || || || |||||||| ||||||||||||||| ||| Sbjct: 913 atgcagatttttgttaagacacttactggtaagaccattacccttgaggttgagagctcg 972 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| |||||||| ||||||||||||||||||||||| |||||||| || Sbjct: 973 gacaccatagacaatgtcaaggccaagatccaggacaaggagggcattcccccggatcaa 1032 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 || | |||||||| |||||||||||||| ||||| ||||| ||| | || |||||||| Sbjct: 1033 caaaggctcatcttcgctggcaagcagctcgaggatggccgtaccttggccgactacaat 1092 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| |||||||| ||| | ||||| |||||||| || Sbjct: 1093 atccagaaggagtccaccctccaccttgtgctccgtctccgtggtggcatgcagattttt 1152 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || || || |||||||| ||||||||||| ||||||| |||| ||||||||||| ||| Sbjct: 1153 gttaaaacactcaccgggaagaccatcactctggaggttgagagctcggacaccatagac 1212 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagca 590 || |||||||| ||||||||||||||||| ||||||||||| || ||||| Sbjct: 1213 aatgtcaaggccaagatccaggacaaggaaggcattcccccagatcagca 1262 Score = 281 bits (142), Expect = 2e-72 Identities = 298/350 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| ||||| ||||| || || || |||||||| ||||||||||||||| ||| Sbjct: 457 atgcagatttttgttaagacacttactggtaagaccattacccttgaggttgagagctcg 516 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| |||||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 517 gacaccatagacaatgtcaaggccaagatccaggacaaggaaggcattcccccagatcag 576 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 || | |||||||| |||||||||||||| ||||| ||||| ||| | || |||||||| Sbjct: 577 caaaggctcatcttcgctggcaagcagctcgaggatggccgtaccttggccgactacaat 636 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| |||||||| ||| | ||||| |||||||| || Sbjct: 637 atccagaaggagtccaccctccaccttgtgctccgtctccgtggtggcatgcagattttt 696 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || || || ||||| || ||||||||||| ||||||| |||| ||||||||||| ||| Sbjct: 697 gttaaaacactcactgggaagaccatcactctggaggttgagagctcggacaccatagac 756 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagca 590 || |||||||| ||||||||||||||||| ||||||||||| || ||||| Sbjct: 757 aatgtcaaggccaagatccaggacaaggaaggcattcccccagatcagca 806 Score = 252 bits (127), Expect = 2e-63 Identities = 348/420 (82%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| ||||| || || ||||| || ||||||||||| || ||||||||| ||| Sbjct: 685 atgcagatttttgttaaaacactcactgggaagaccatcactctggaggttgagagctcg 744 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| |||||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 745 gacaccatagacaatgtcaaggccaagatccaggacaaggaaggcattcccccagatcag 804 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 || | |||||||| ||||||||||| | ||||| ||||| ||| | |||||||| || Sbjct: 805 caaaggctcatcttcgctggcaagcaattggaggatggccgtaccttggctgactataat 864 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||| || ||||||||| |||||||||| ||| | ||||| |||||||| || Sbjct: 865 atccagaaggaatctaccctccacttggtgctccgtctccgtggtggcatgcagattttt 924 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| || || || |||||||| ||||| |||| |||| ||||||||||| ||| Sbjct: 925 gttaagacacttactggtaagaccattacccttgaggttgagagctcggacaccatagac 984 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| |||||||||||||||||||||||||||||||| || || || ||||| Sbjct: 985 aatgtcaaggccaagatccaggacaaggagggcattcccccggatcaacaaagg-ctcat 1043 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || |||||||| ||| | || | |||||| |||||||||| Sbjct: 1044 cttcg-ctggcaagcagctcgaggatggccgtaccttggccgactacaatatccagaagg 1102 Score = 228 bits (115), Expect = 2e-56 Identities = 345/420 (82%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| ||||| || || |||||||| ||||||||||| || ||||||||| ||| Sbjct: 1141 atgcagatttttgttaaaacactcaccgggaagaccatcactctggaggttgagagctcg 1200 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| |||||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 1201 gacaccatagacaatgtcaaggccaagatccaggacaaggaaggcattcccccagatcag 1260 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 || | |||||||| ||||||||||| | ||||| ||||| ||| | |||||||| || Sbjct: 1261 caaaggctcatcttcgctggcaagcaattggaggatggccgtaccttggctgactataat 1320 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||| || ||||||||| ||||||| | |||||||| || ||||| || || Sbjct: 1321 atccagaaggaatctaccctccacttggtgctgaggctcaggggagggatgcaaattttt 1380 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||| |||||||| || ||||||||||| ||||||| |||| |||||||| |||||| Sbjct: 1381 gtgaaaaccctcacggggaagaccatcactctggaggttgagagctcggacactatcgac 1440 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||| |||||||||||||| || || || ||||| ||| || || || Sbjct: 1441 aatgtgaaggcaaagatacaggacaaggagggaatcccaccagaccaacagagg-ctgat 1499 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| |||| |||||||| || ||||| || || || || | ||| ||||||||||||| Sbjct: 1500 ctttg-cgggtaagcagctcgaggatgggcgcacactggcagactataacatccagaagg 1558 Score = 147 bits (74), Expect = 7e-32 Identities = 176/210 (83%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||| || |||||||| |||||||| || ||||||||||| || ||||||||| ||| Sbjct: 1368 gatgcaaatttttgtgaaaaccctcacggggaagaccatcactctggaggttgagagctc 1427 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| |||||||| || ||||| ||||| |||||||||||||| ||||| || ||||| Sbjct: 1428 ggacactatcgacaatgtgaaggcaaagatacaggacaaggagggaatcccaccagacca 1487 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 ||| | || |||||||| || |||||||| ||||| || ||||| || || ||||| || Sbjct: 1488 acagaggctgatctttgcgggtaagcagctcgaggatgggcgcacactggcagactataa 1547 Query: 420 catccagaaggagtccaccctccacctggt 449 |||||||||||| ||||| || |||||||| Sbjct: 1548 catccagaaggaatccactcttcacctggt 1577
>ref|XM_001001919.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 3 (Ubc), mRNA Length = 794 Score = 337 bits (170), Expect = 4e-89 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||| ||| | || || |||||||||||||| ||||| ||| || Sbjct: 321 gatgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccag 380 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 381 tgacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 440 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 441 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 500 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 501 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 560 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 561 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 620 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 621 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 679 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 680 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 737 Score = 224 bits (113), Expect = 4e-55 Identities = 194/221 (87%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 550 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 609 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 610 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 669 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 670 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 729 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcag 461 |||||||| ||||||||||| |||||||| || |||||||| Sbjct: 730 atccagaaagagtccaccctgcacctggtccttcgcctcag 770
>ref|XM_001001949.1| PREDICTED: Mus musculus ubiquitin C, transcript variant 8 (Ubc), mRNA Length = 1354 Score = 337 bits (170), Expect = 4e-89 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||| ||| | || || |||||||||||||| ||||| ||| || Sbjct: 653 gatgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccag 712 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 713 tgacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 772 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 773 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 832 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 833 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 892 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 893 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 952 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 953 gaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 1011 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 1012 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 1069 Score = 283 bits (143), Expect = 5e-73 Identities = 242/275 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 882 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 941 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 942 gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag 1001 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 1002 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 1061 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 1062 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 1121 Query: 481 gtgaagaccctcaccggcaagaccatcaccctgga 515 ||||||||||| || ||||||||||||||| |||| Sbjct: 1122 gtgaagaccctgacaggcaagaccatcaccttgga 1156
>gb|BC008661.1| Mus musculus ubiquitin C, mRNA (cDNA clone IMAGE:3598724), complete cds Length = 777 Score = 337 bits (170), Expect = 4e-89 Identities = 358/419 (85%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||| ||| | || || |||||||||||||| ||||| ||| || Sbjct: 72 gatgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccag 131 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 132 tgacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgacca 191 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 192 gcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaa 251 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 252 catccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatctt 311 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 312 tgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccataga 371 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| ||||| ||||||||| || || | Sbjct: 372 gaatgtcaaggctaagatccaggacaaggagggcatcccccctgaccagcagagg-ctga 430 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||| Sbjct: 431 tctttg-caggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaa 488 Score = 291 bits (147), Expect = 2e-75 Identities = 243/275 (88%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||| || | Sbjct: 301 atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt 360 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 361 gacaccatagagaatgtcaaggctaagatccaggacaaggagggcatcccccctgaccag 420 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || ||||||||||| | ||||||||| Sbjct: 421 cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac 480 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 481 atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt 540 Query: 481 gtgaagaccctcaccggcaagaccatcaccctgga 515 ||||||||||| || |||||||||||||||||||| Sbjct: 541 gtgaagaccctgacaggcaagaccatcaccctgga 575
>gb|DQ216247.1| Taeniopygia guttata clone 0058P0020E12 ubiquitin C variant 7-like mRNA, complete sequence Length = 1383 Score = 335 bits (169), Expect = 1e-88 Identities = 359/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| || Sbjct: 752 gatgcagatctttgtgaagaccctgaccggcaagaccatcactcttgaggtggagcccag 811 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||| || ||||| || ||||| Sbjct: 812 tgacaccattgaaaatgtcaaggccaagatccaggacaaggaaggtatccctcctgacca 871 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || ||||| |||||||||||||| || || || |||||||| |||||||||| Sbjct: 872 gcagaggctgatcttcgctggcaagcagctggaagatgggcgcaccctctctgactacaa 931 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| || |||||||| || |||||||| |||||||||||||| ||||||||||| Sbjct: 932 catccagaaagaatccaccctgcatctggtgctgcgcctcaggggtgggatgcagatctt 991 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||| |||||||| || |||||||||||||||||||| | |||| | ||||||||||| Sbjct: 992 cgtcaagaccctgactggcaagaccatcaccctggaagttgagcccagcgacaccatcga 1051 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||| ||||| ||||||||||| ||||||||| || || | Sbjct: 1052 gaatgtcaaggccaagatccaggataaggaaggcattcccccagaccagcagagg-ctga 1110 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | || | | ||||||||||| || ||||| || ||||| | | |||||||||||||||| Sbjct: 1111 ttttcgcc-ggcaagcagctggaagatgggcgcaccctctccgactacaacatccagaag 1169 Query: 660 g 660 | Sbjct: 1170 g 1170 Score = 325 bits (164), Expect = 1e-85 Identities = 358/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| |||||||||||||||||||| || |||||| || Sbjct: 296 gatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagttgagcccag 355 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || || ||||| |||||||||||||||||||||||||| || ||||| Sbjct: 356 tgacaccattgaaaatgtgaaggccaagatccaggacaaggagggcatccctcctgacca 415 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || ||||||||||| |||||||| ||||| || |||||||| | |||||||| Sbjct: 416 gcagaggctgatctttgctggtaagcagctggaggatgggcgcaccctctccgactacaa 475 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 476 catccagaaggaatccaccctgcacctggtgctgcgcctgagaggtgggatgcagatctt 535 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| ||||||||||||||||||||||| | |||| | |||||||| || Sbjct: 536 tgtgaagaccctgaccggcaagaccatcaccctggaagttgagcccagcgacaccattga 595 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||| || || || || ||||||||| || || | Sbjct: 596 aaatgtcaaggccaagatccaggacaaggaaggtatccctcctgaccagcagagg-ctga 654 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || ||||| || ||||| | | |||||||||||||||| Sbjct: 655 tctttg-ctggcaagcagctggaagatgggcgcaccctctcagactacaacatccagaag 713 Query: 660 g 660 | Sbjct: 714 g 714 Score = 315 bits (159), Expect = 1e-82 Identities = 356/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||||||||| ||| || | Sbjct: 69 atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggtggagcccagt 128 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 129 gacaccattgaaaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || |||||||| || || ||||||||||| | ||||||||| Sbjct: 189 cagaggctgatctttgccggtaagcagctggaagatggccgcaccctgtccgactacaac 248 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 || ||||||||||| || || ||||||||||| ||||| || ||||| |||||||||||| Sbjct: 249 attcagaaggagtcaactctgcacctggtgctgcgcctgagaggtgggatgcagatcttc 308 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | |||| | |||||||| || Sbjct: 309 gtgaagaccctgaccggcaagaccatcaccctggaagttgagcccagtgacaccattgaa 368 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||||||||| || || ||||||||| || || || Sbjct: 369 aatgtgaaggccaagatccaggacaaggagggcatccctcctgaccagcagagg-ctgat 427 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | || |||||||| || ||||| || ||||| | | ||||||||||||||||| Sbjct: 428 ctttg-ctggtaagcagctggaggatgggcgcaccctctccgactacaacatccagaagg 486 Score = 297 bits (150), Expect = 3e-77 Identities = 353/419 (84%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| |||||||||||||||||||| || |||||| || Sbjct: 524 gatgcagatctttgtgaagaccctgaccggcaagaccatcaccctggaagttgagcccag 583 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| || || || |||||||| ||||||||||||||||| || ||||| || ||||| Sbjct: 584 cgacaccattgaaaatgtcaaggccaagatccaggacaaggaaggtatccctcctgacca 643 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||||||||||||||| || || || |||||||| | |||||||| Sbjct: 644 gcagaggctgatctttgctggcaagcagctggaagatgggcgcaccctctcagactacaa 703 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 704 catccagaaggaatccaccctgcacctggtgctgcgcctgagaggtgggatgcagatctt 763 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| ||||||||||||||||| || |||| ||| | |||||||| || Sbjct: 764 tgtgaagaccctgaccggcaagaccatcactcttgaggtggagcccagtgacaccattga 823 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||| || || || || ||||||||| || || | Sbjct: 824 aaatgtcaaggccaagatccaggacaaggaaggtatccctcctgaccagcagagg-ctga 882 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | || | | ||||||||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 883 tcttcg-ctggcaagcagctggaagatgggcgcaccctctctgactacaacatccagaa 940 Score = 182 bits (92), Expect = 1e-42 Identities = 194/228 (85%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| || |||||||| || ||||||||||||||||| || |||||| || Sbjct: 980 gatgcagatcttcgtcaagaccctgactggcaagaccatcaccctggaagttgagcccag 1039 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| ||||| || |||||||| ||||||||||| ||||| ||||| ||||| ||||| Sbjct: 1040 cgacaccatcgagaatgtcaaggccaagatccaggataaggaaggcattcccccagacca 1099 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || || || || ||||||||||| || || || |||||||| | |||||||| Sbjct: 1100 gcagaggctgattttcgccggcaagcagctggaagatgggcgcaccctctccgactacaa 1159 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 1160 catccagaaggaatccaccctgcacctggtgctgcgcctcaggggtgg 1207
>gb|DQ216236.1| Taeniopygia guttata clone 0058P0054D08 ubiquitin C variant 1-like mRNA, complete sequence Length = 1150 Score = 335 bits (169), Expect = 1e-88 Identities = 363/426 (85%), Gaps = 2/426 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| ||||||||||||||||| || ||||| ||| || Sbjct: 524 gatgcagatctttgtgaagaccctgaccggcaagaccatcactctcgaggtggagcccag 583 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||| ||||| ||||||||||| ||||| || ||||| || ||||| Sbjct: 584 tgacaccatcgagaacgtgaaggccaagatccaggataaggaaggtatccctcctgacca 643 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| ||||||||||| || || ||||||||||| | |||||||| Sbjct: 644 gcagaggctgatctttgccggcaagcagctggaagatggccgcaccctctccgactacaa 703 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||| || || |||||||||||||| ||||||||||| Sbjct: 704 catccagaaggaatccaccctgcaccttgtcctgcgcctcaggggtgggatgcagatctt 763 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||| |||||||| || |||||||||||||||||||| | |||| | |||||||| || Sbjct: 764 cgtcaagaccctgactggcaagaccatcaccctggaagttgagcccagtgacaccattga 823 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || || ||||| ||||||||||||||||||||||||||||| || |||||| || || | Sbjct: 824 aaatgtgaaggccaagatccaggacaaggagggcattcccccagatcagcagagg-ctga 882 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 883 tctttg-ctggcaagcagctggaagatggccgcaccctctccgactacaacatccagaag 941 Query: 660 gggtca 665 | |||| Sbjct: 942 gagtca 947 Score = 287 bits (145), Expect = 3e-74 Identities = 353/421 (83%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||| ||||| || |||||||||||||| |||||||| || || Sbjct: 296 gatgcagatcttcgtgaaaaccctgactggcaagaccatcactcttgaggtggaacccag 355 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||| ||||| |||||||| || ||||| Sbjct: 356 tgacaccattgagaatgtcaaggccaagatccaggataaggaaggcatccctcctgacca 415 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || || || |||||||||||||| ||||| || |||||||| |||||||||| Sbjct: 416 gcagaggctgattttcgctggcaagcagctggaggatgggcgcaccctgtctgactacaa 475 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 476 catccagaaggaatccaccctgcacctggtgctgcgcctgagaggtgggatgcagatctt 535 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| ||||||||||||||||| || |||| ||| | ||||||||||| Sbjct: 536 tgtgaagaccctgaccggcaagaccatcactctcgaggtggagcccagtgacaccatcga 595 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||| ||||| ||||||||||| ||||| || || || || ||||||||| || || | Sbjct: 596 gaacgtgaaggccaagatccaggataaggaaggtatccctcctgaccagcagagg-ctga 654 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||||| Sbjct: 655 tctttgcc-ggcaagcagctggaagatggccgcaccctctccgactacaacatccagaag 713 Query: 660 g 660 | Sbjct: 714 g 714 Score = 260 bits (131), Expect = 7e-66 Identities = 349/420 (83%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| || | Sbjct: 69 atgcagatctttgtgaagaccctgaccggcaagaccatcacccttgaggtggagcccagt 128 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||| ||||| ||||| |||||| Sbjct: 129 gacaccattgaaaatgtcaaggccaagatccaggacaaggaaggcattcccccagaccag 188 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||| |||||||| || || || || | | |||||||||||| Sbjct: 189 cagaggctgatctttgctggtaagcagctggaagatgggcgtaggcgggctgactacaac 248 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| || || ||||||||| | ||||| || ||||| |||||||||||| Sbjct: 249 atccagaaagagtcaactctgcacctggtgttgcgcctgagaggtgggatgcagatcttc 308 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||| ||||| || |||||||||||||| || |||| || | |||||||| || Sbjct: 309 gtgaaaaccctgactggcaagaccatcactcttgaggtggaacccagtgacaccattgag 368 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||||||||| ||||| ||||| || || ||||||||| || || || Sbjct: 369 aatgtcaaggccaagatccaggataaggaaggcatccctcctgaccagcagagg-ctgat 427 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 ||| | ||||||||||| || ||||| || ||||| ||| ||||||||||||||||| Sbjct: 428 -tttcgctggcaagcagctggaggatgggcgcaccctgtctgactacaacatccagaagg 486 Score = 190 bits (96), Expect = 5e-45 Identities = 195/228 (85%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| || |||||||| || ||||||||||||||||| || |||||| || Sbjct: 752 gatgcagatcttcgtcaagaccctgactggcaagaccatcaccctggaagttgagcccag 811 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || || ||||| ||||||||||||||||||||||| ||||| || || Sbjct: 812 tgacaccattgaaaatgtgaaggccaagatccaggacaaggagggcattcccccagatca 871 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||||||||||||||| || || ||||||||||| | |||||||| Sbjct: 872 gcagaggctgatctttgctggcaagcagctggaagatggccgcaccctctccgactacaa 931 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 ||||||||||||||| || || ||||| || || |||||||||||||| Sbjct: 932 catccagaaggagtcaactctgcaccttgtcctgcgcctcaggggtgg 979
>ref|NM_018955.2| Homo sapiens ubiquitin B (UBB), mRNA Length = 971 Score = 335 bits (169), Expect = 1e-88 Identities = 372/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| || | Sbjct: 139 atgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagt 198 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 199 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccccgaccag 258 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||| || ||| ||||||||||| Sbjct: 259 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 318 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 319 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 378 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 379 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 438 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 439 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 497 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 498 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 556 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 557 agtcgaccctgcacctgg 574 Score = 319 bits (161), Expect = 8e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 367 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 426 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 427 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 486 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 487 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 546 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 547 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 606 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 607 gtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaa 666 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| ||||| ||||||||| || ||||| Sbjct: 667 aatgtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagagg-ctcat 725 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 726 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 782 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| || | Sbjct: 595 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 654 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || ||||||||||| |||||| Sbjct: 655 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 714 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 715 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 774 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 775 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 821
>gb|BC038999.1| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:47606 IMAGE:4943285), complete cds Length = 957 Score = 335 bits (169), Expect = 1e-88 Identities = 372/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| || | Sbjct: 108 atgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagt 167 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 168 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccccgaccag 227 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||| || ||| ||||||||||| Sbjct: 228 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 287 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 288 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 347 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 348 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 407 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 408 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 466 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 467 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 525 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 526 agtcgaccctgcacctgg 543 Score = 319 bits (161), Expect = 8e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 336 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 395 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 396 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 455 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 456 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 515 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 516 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 575 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 576 gtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaa 635 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| ||||| ||||||||| || ||||| Sbjct: 636 aatgtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagagg-ctcat 694 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 695 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 751 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| || | Sbjct: 564 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 623 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || ||||||||||| |||||| Sbjct: 624 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 683 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 684 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 743 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 744 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 790
>gb|BT020104.1| Homo sapiens ubiquitin B mRNA, complete cds Length = 690 Score = 335 bits (169), Expect = 1e-88 Identities = 372/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| || | Sbjct: 1 atgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagt 60 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 61 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccccgaccag 120 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||| || ||| ||||||||||| Sbjct: 121 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 180 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 181 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 240 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 241 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 300 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 301 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 359 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 360 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 418 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 419 agtcgaccctgcacctgg 436 Score = 319 bits (161), Expect = 8e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 229 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 288 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 289 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 348 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 349 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 408 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 409 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 468 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 469 gtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaa 528 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| ||||| ||||||||| || ||||| Sbjct: 529 aatgtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagagg-ctcat 587 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 588 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 644 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| || | Sbjct: 457 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 516 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || ||||||||||| |||||| Sbjct: 517 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 576 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 577 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 636 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 637 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 683
>gb|BC046123.2| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:57581 IMAGE:3879581), complete cds Length = 951 Score = 335 bits (169), Expect = 1e-88 Identities = 372/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| || | Sbjct: 87 atgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagt 146 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 147 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccccgaccag 206 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||| || ||| ||||||||||| Sbjct: 207 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 266 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 267 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 326 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 327 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 386 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 387 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 445 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 446 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 504 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 505 agtcgaccctgcacctgg 522 Score = 319 bits (161), Expect = 8e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 315 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 374 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 375 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 434 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 435 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 494 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 495 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 554 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 555 gtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaa 614 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| ||||| ||||||||| || ||||| Sbjct: 615 aatgtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagagg-ctcat 673 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 674 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 730 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| || | Sbjct: 543 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 602 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || ||||||||||| |||||| Sbjct: 603 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 662 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 663 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 722 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 723 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 769
>gb|BC031027.1| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:32826 IMAGE:4715377), complete cds Length = 919 Score = 335 bits (169), Expect = 1e-88 Identities = 372/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| || | Sbjct: 99 atgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagt 158 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 159 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccccgaccag 218 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||| || ||| ||||||||||| Sbjct: 219 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 278 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 279 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 338 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 339 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 398 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 399 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 457 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 458 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 516 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 517 agtcgaccctgcacctgg 534 Score = 319 bits (161), Expect = 8e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 327 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 386 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 387 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 446 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 447 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 506 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 507 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 566 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 567 gtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaa 626 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| ||||| ||||||||| || ||||| Sbjct: 627 aatgtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagagg-ctcat 685 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 686 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 742 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| || | Sbjct: 555 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 614 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || ||||||||||| |||||| Sbjct: 615 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 674 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 675 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 734 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 735 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 781
>gb|BC026301.1| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:24729 IMAGE:4280629), complete cds Length = 957 Score = 335 bits (169), Expect = 1e-88 Identities = 372/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| || | Sbjct: 97 atgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagt 156 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 157 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccccgaccag 216 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||| || ||| ||||||||||| Sbjct: 217 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 276 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 277 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 336 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 337 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 396 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 397 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 455 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 456 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 514 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 515 agtcgaccctgcacctgg 532 Score = 319 bits (161), Expect = 8e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 325 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 384 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 385 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 444 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 445 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 504 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 505 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 564 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 565 gtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaa 624 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| ||||| ||||||||| || ||||| Sbjct: 625 aatgtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagagg-ctcat 683 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 684 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 740 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| || | Sbjct: 553 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 612 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || ||||||||||| |||||| Sbjct: 613 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 672 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 673 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 732 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 733 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 779
>gb|BC021067.1| Homo sapiens cDNA clone IMAGE:3510175, **** WARNING: chimeric clone **** Length = 4562 Score = 335 bits (169), Expect = 1e-88 Identities = 372/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| || | Sbjct: 3712 atgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagt 3771 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 3772 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccccgaccag 3831 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||| || ||| ||||||||||| Sbjct: 3832 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 3891 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 3892 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 3951 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 3952 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 4011 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 4012 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 4070 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 4071 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 4129 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 4130 agtcgaccctgcacctgg 4147 Score = 319 bits (161), Expect = 8e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 3940 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 3999 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 4000 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 4059 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 4060 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 4119 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 4120 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 4179 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 4180 gtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaa 4239 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| ||||| ||||||||| || ||||| Sbjct: 4240 aatgtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagagg-ctcat 4298 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 4299 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 4355 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| || | Sbjct: 4168 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 4227 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || ||||||||||| |||||| Sbjct: 4228 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 4287 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 4288 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 4347 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 4348 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 4394
>emb|CR620731.1| full-length cDNA clone CS0DF038YI22 of Fetal brain of Homo sapiens (human) Length = 940 Score = 335 bits (169), Expect = 1e-88 Identities = 372/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| || | Sbjct: 113 atgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagt 172 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 173 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccccgaccag 232 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||| || ||| ||||||||||| Sbjct: 233 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 292 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 293 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 352 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 353 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 412 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 413 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 471 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 472 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 530 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 531 agtcgaccctgcacctgg 548 Score = 319 bits (161), Expect = 8e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 341 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 400 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 401 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 460 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 461 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 520 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 521 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 580 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 581 gtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaa 640 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| ||||| ||||||||| || ||||| Sbjct: 641 aatgtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagagg-ctcat 699 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 700 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 756 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| || | Sbjct: 569 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 628 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || ||||||||||| |||||| Sbjct: 629 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 688 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 689 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 748 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 749 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 795
>emb|CR607481.1| full-length cDNA clone CS0DN001YF11 of Adult brain of Homo sapiens (human) Length = 917 Score = 335 bits (169), Expect = 1e-88 Identities = 372/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| || | Sbjct: 87 atgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagt 146 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 147 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccccgaccag 206 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||| || ||| ||||||||||| Sbjct: 207 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 266 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 267 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 326 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 327 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 386 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 387 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 445 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 446 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 504 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 505 agtcgaccctgcacctgg 522 Score = 319 bits (161), Expect = 8e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 315 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 374 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 375 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 434 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 435 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 494 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 495 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 554 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 555 gtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaa 614 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| ||||| ||||||||| || ||||| Sbjct: 615 aatgtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagagg-ctcat 673 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 674 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 730 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| || | Sbjct: 543 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 602 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || ||||||||||| |||||| Sbjct: 603 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 662 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 663 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 722 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 723 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 769
>emb|CR589965.1| full-length cDNA clone CS0DF011YA08 of Fetal brain of Homo sapiens (human) Length = 908 Score = 335 bits (169), Expect = 1e-88 Identities = 372/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| || | Sbjct: 79 atgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagt 138 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 139 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccccgaccag 198 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||| || ||| ||||||||||| Sbjct: 199 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 258 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 259 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 318 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 319 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 378 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 379 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 437 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 438 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 496 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 497 agtcgaccctgcacctgg 514 Score = 319 bits (161), Expect = 8e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 307 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 366 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 367 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 426 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 427 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 486 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 487 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 546 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 547 gtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaa 606 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| ||||| ||||||||| || ||||| Sbjct: 607 aatgtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagagg-ctcat 665 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 666 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 722 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| || | Sbjct: 535 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 594 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || ||||||||||| |||||| Sbjct: 595 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 654 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 655 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 714 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 715 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 761
>gb|AC093484.2| Homo sapiens chromosome , clone RP11-138I1, complete sequence Length = 170944 Score = 335 bits (169), Expect = 1e-88 Identities = 372/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| || | Sbjct: 102697 atgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagt 102756 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 102757 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccccgaccag 102816 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||| || ||| ||||||||||| Sbjct: 102817 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 102876 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 102877 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 102936 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 102937 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 102996 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 102997 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 103055 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 103056 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 103114 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 103115 agtcgaccctgcacctgg 103132 Score = 319 bits (161), Expect = 8e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 102925 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 102984 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 102985 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 103044 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 103045 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 103104 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 103105 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 103164 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 103165 gtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaa 103224 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| ||||| ||||||||| || ||||| Sbjct: 103225 aatgtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagagg-ctcat 103283 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 103284 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 103340 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| || | Sbjct: 103153 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 103212 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || ||||||||||| |||||| Sbjct: 103213 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 103272 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 103273 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 103332 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 103333 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 103379
>gb|AY888190.1| Synthetic construct Homo sapiens clone FLH021788.01X ubiquitin B (UBB) mRNA, complete cds Length = 690 Score = 335 bits (169), Expect = 1e-88 Identities = 372/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| || | Sbjct: 1 atgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagt 60 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 61 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccccgaccag 120 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||| || ||| ||||||||||| Sbjct: 121 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 180 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 181 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 240 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 241 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 300 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 301 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 359 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 360 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 418 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 419 agtcgaccctgcacctgg 436 Score = 319 bits (161), Expect = 8e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 229 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 288 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 289 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 348 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 349 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 408 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 409 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 468 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 469 gtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaa 528 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| ||||| ||||||||| || ||||| Sbjct: 529 aatgtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagagg-ctcat 587 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 588 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 644 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| || | Sbjct: 457 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 516 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || ||||||||||| |||||| Sbjct: 517 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 576 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 577 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 636 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 637 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 683
>dbj|AB089620.1| Gorilla gorilla UbB gene for polyubiquitin B, complete cds Length = 690 Score = 335 bits (169), Expect = 1e-88 Identities = 372/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| || | Sbjct: 1 atgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagt 60 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 61 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccccgaccag 120 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 121 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 180 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 181 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 240 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||| | ||| | ||||||||||| Sbjct: 241 gtgaagaccctgactggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 300 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 301 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 359 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 360 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 418 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 419 agtcgaccctgcacctgg 436 Score = 303 bits (153), Expect = 5e-79 Identities = 353/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| || ||||||||||||||||| || || ||| || | Sbjct: 229 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaagtggagcccagt 288 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 289 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 348 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 349 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 408 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 409 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 468 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 469 gtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaa 528 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| || || ||||||||| || ||||| Sbjct: 529 aatgtgaaggccaagatccaagataaagaaggcatccctcccgaccagcagagg-ctcat 587 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 588 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 644 Score = 188 bits (95), Expect = 2e-44 Identities = 194/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| || | Sbjct: 457 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 516 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || |||||||| || |||||| Sbjct: 517 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatccctcccgaccag 576 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 577 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 636 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 637 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 683
>dbj|AB089618.1| Pongo pygmaeus UbB gene for polyubiquitin B, complete cds Length = 690 Score = 335 bits (169), Expect = 1e-88 Identities = 372/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| || ||||||||||||||||||||||| ||| || | Sbjct: 1 atgcagatcttcgtgaaaacccttactggcaagaccatcacccttgaggtggagcccagt 60 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 61 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccccgaccag 120 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||| || ||| ||||||||||| Sbjct: 121 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 180 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 181 atccagaaagagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 240 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 241 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgaa 300 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || |||||||| || ||||||||| || ||||| Sbjct: 301 aatgtgaaggccaagatccaggataaagaaggcattcctcccgaccagcagagg-ctcat 359 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || ||||| || || ||| ||| ||||||||||||||||| Sbjct: 360 ctttg-caggcaagcagctggaagatggtcgcactctttctgactacaacatccagaagg 418 Query: 661 ggtcacccctgcccctgg 678 |||| |||||| ||||| Sbjct: 419 agtcaaccctgcacctgg 436 Score = 319 bits (161), Expect = 8e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 229 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 288 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || ||||| || || |||||| Sbjct: 289 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcattcctcccgaccag 348 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || || ||||| ||| ||||||||||| Sbjct: 349 cagaggctcatctttgcaggcaagcagctggaagatggtcgcactctttctgactacaac 408 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 409 atccagaaggagtcaaccctgcacctggtcctacgtctgagaggtggtatgcagatcttc 468 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 469 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgaa 528 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| ||||| ||||||||| || ||||| Sbjct: 529 aatgtgaaggccaagatccaagataaagaaggcatcccccctgaccagcagagg-ctcat 587 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 588 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 644 Score = 204 bits (103), Expect = 3e-49 Identities = 196/227 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 457 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 516 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || ||||||||||| |||||| Sbjct: 517 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccctgaccag 576 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 577 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 636 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 637 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 683
>dbj|AB089617.1| Homo sapiens UbB gene for polyubiquitin B, complete cds Length = 690 Score = 335 bits (169), Expect = 1e-88 Identities = 372/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| || | Sbjct: 1 atgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagt 60 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 61 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccccgaccag 120 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||| || ||| ||||||||||| Sbjct: 121 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 180 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 181 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 240 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 241 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 300 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 301 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 359 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 360 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 418 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 419 agtcgaccctgcacctgg 436 Score = 319 bits (161), Expect = 8e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 229 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 288 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 289 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 348 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 349 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 408 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 409 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 468 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 469 gtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaa 528 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| ||||| ||||||||| || ||||| Sbjct: 529 aatgtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagagg-ctcat 587 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 588 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 644 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| || | Sbjct: 457 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 516 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || ||||||||||| |||||| Sbjct: 517 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 576 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 577 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 636 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 637 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 683
>dbj|AK129498.1| Homo sapiens cDNA FLJ25987 fis, clone CBR05488, highly similar to Homo sapiens ubiquitin B (UBB) Length = 928 Score = 335 bits (169), Expect = 1e-88 Identities = 372/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| || | Sbjct: 97 atgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagt 156 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 157 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccccgaccag 216 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||| || ||| ||||||||||| Sbjct: 217 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 276 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 277 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 336 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 337 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 396 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 397 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 455 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 456 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 514 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 515 agtcgaccctgcacctgg 532 Score = 311 bits (157), Expect = 2e-81 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 325 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 384 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 385 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 444 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 445 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 504 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 505 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 564 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 565 gtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaa 624 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| | |||||| || || || ||||| ||||| ||||||||| || ||||| Sbjct: 625 aatgtgaaggccatgatccaagataaagaaggcatcccccccgaccagcagagg-ctcat 683 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 684 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 740 Score = 188 bits (95), Expect = 2e-44 Identities = 194/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| || | Sbjct: 553 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 612 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| | |||||| || || || ||||||||||| |||||| Sbjct: 613 gacaccatcgaaaatgtgaaggccatgatccaagataaagaaggcatcccccccgaccag 672 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 673 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 732 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 733 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 779
>gb|BC015127.1| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:24232 IMAGE:3929901), complete cds Length = 965 Score = 335 bits (169), Expect = 1e-88 Identities = 372/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| || | Sbjct: 101 atgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagt 160 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 161 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccccgaccag 220 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||| || ||| ||||||||||| Sbjct: 221 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 280 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 281 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 340 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 341 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 400 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 401 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 459 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 460 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 518 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 519 agtcgaccctgcacctgg 536 Score = 319 bits (161), Expect = 8e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 329 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 388 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 389 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 448 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 449 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 508 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 509 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 568 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 569 gtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaa 628 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| ||||| ||||||||| || ||||| Sbjct: 629 aatgtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagagg-ctcat 687 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 688 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 744 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| || | Sbjct: 557 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 616 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || ||||||||||| |||||| Sbjct: 617 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 676 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 677 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 736 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 737 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 783
>gb|BC009301.2| Homo sapiens ubiquitin B, mRNA (cDNA clone MGC:16688 IMAGE:4126622), complete cds Length = 943 Score = 335 bits (169), Expect = 1e-88 Identities = 372/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| || | Sbjct: 85 atgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagt 144 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 145 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccccgaccag 204 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||| || ||| ||||||||||| Sbjct: 205 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 264 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 265 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 324 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 325 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 384 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 385 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 443 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 444 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 502 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 503 agtcgaccctgcacctgg 520 Score = 319 bits (161), Expect = 8e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 313 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 372 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 373 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 432 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 433 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 492 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 493 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 552 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 553 gtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaa 612 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| ||||| ||||||||| || ||||| Sbjct: 613 aatgtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagagg-ctcat 671 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 672 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 728 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| || | Sbjct: 541 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 600 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || ||||||||||| |||||| Sbjct: 601 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 660 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 661 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 720 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 721 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 767
>dbj|D16248.1|SOYUBI Glycine max Subi-1 gene for ubiquitin, complete cds Length = 4955 Score = 335 bits (169), Expect = 1e-88 Identities = 362/425 (85%), Gaps = 2/425 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||| ||||| ||||| ||||| ||||| ||||| || |||| Sbjct: 3316 atgcagatcttcgtcaagactctcactggcaaaaccataaccctagaggtcgaaagctct 3375 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || |||||||||||||| |||||||||||||||||||| |||||||| |||||| Sbjct: 3376 gacaccattgacaacgtcaaggccaagatccaggacaaggagggaatccccccagaccag 3435 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 || || |||||||| || || ||||| ||||||||||| |||||||| || ||||||||| Sbjct: 3436 caacgtctcatcttcgccggaaagcaacttgaggacgggcgcaccctcgccgactacaac 3495 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||| || ||||| ||||| || ||||| ||| | ||||| |||||||||||| Sbjct: 3496 atccagaaggaatcaacccttcacctcgtcctccgtctccgtggtggcatgcagatcttc 3555 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||||||||||||||| || ||||| || | ||| || |||||||||||| Sbjct: 3556 gttaagaccctcaccggcaagactataaccctagaagtcgagagctccgacaccatcgac 3615 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| |||||||||||||||||||| || ||||| ||||||||| || || || Sbjct: 3616 aacgtcaaggctaagatccaggacaaggagggtatccccccagaccagcagagg-ctgat 3674 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || || || || |||||||||| ||||||||||||||||| Sbjct: 3675 cttcgcc-ggcaagcagctcgaggacggacgtacccttgctgactacaacatccagaagg 3733 Query: 661 ggtca 665 |||| Sbjct: 3734 agtca 3738 Score = 329 bits (166), Expect = 9e-87 Identities = 359/422 (85%), Gaps = 2/422 (0%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 ||||||||||||| || |||||||||||||| |||||||||||||||||||| || || Sbjct: 3086 agatgcagatcttcgtcaagaccctcaccggaaagaccatcacccttgaggtggaaagct 3145 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 ||||||| ||||||||||||||||| ||||||||||||||||| || || |||||||||| Sbjct: 3146 ctgacaccatcgacaacgtcaaggccaagatccaggacaaggaaggaattcccccggacc 3205 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 |||| || ||||||||||| || |||||||| ||||||||||| ||||| || ||||||| Sbjct: 3206 agcaacgtctcatctttgccggaaagcagctcgaggacggccgtaccctcgccgactaca 3265 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 |||||||||||||||| ||||| ||||| || || || ||| | ||||| |||||||||| Sbjct: 3266 acatccagaaggagtcaacccttcaccttgtccttcgtctccgtggtggcatgcagatct 3325 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 |||| ||||| ||||| ||||| ||||| ||||| |||| || || |||||||| | Sbjct: 3326 tcgtcaagactctcactggcaaaaccataaccctagaggtcgaaagctctgacaccattg 3385 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 ||||||||||||| |||||||||||||||||||| || ||||| |||||||| | | ||| Sbjct: 3386 acaacgtcaaggccaagatccaggacaaggagggaatccccccagaccagcaac-gtctc 3444 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || || | | || ||||| ||||| || || || ||||| || | ||||||||||||||| Sbjct: 3445 atcttcgcc-ggaaagcaacttgaggacgggcgcaccctcgccgactacaacatccagaa 3503 Query: 659 gg 660 || Sbjct: 3504 gg 3505 Score = 309 bits (156), Expect = 8e-81 Identities = 359/425 (84%), Gaps = 2/425 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||||||||||||||| || ||||| || || ||| ||| Sbjct: 3544 atgcagatcttcgttaagaccctcaccggcaagactataaccctagaagtcgagagctcc 3603 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||||| |||||||||||||||||||| |||||||| |||||| Sbjct: 3604 gacaccatcgacaacgtcaaggctaagatccaggacaaggagggtatccccccagaccag 3663 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||| || ||||||||||| |||||||| || |||||||||||||||||| Sbjct: 3664 cagaggctgatcttcgccggcaagcagctcgaggacggacgtacccttgctgactacaac 3723 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| || |||||| ||||| | || || | |||||||||||||||||| Sbjct: 3724 atccagaaggagtcaactctccacttggtgttgcgtcttcgtggtggtatgcagatcttc 3783 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| || || ||||| || ||||| |||| ||| || |||||||| ||| Sbjct: 3784 gtcaagacccttacgggtaagactattaccctcgaggtggagagctccgacaccattgac 3843 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||||||||||||||||||||| || || || |||||||||||| || || || Sbjct: 3844 aatgtgaaggcgaagatccaggacaaggaaggaatcccaccggaccagcagagg-cttat 3902 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||| ||||| || ||||| | ||||| |||| ||||||||||||||||| Sbjct: 3903 ttttg-ctggcaaacagctagaggatggaaggaccctcgctgactacaacatccagaagg 3961 Query: 661 ggtca 665 |||| Sbjct: 3962 agtca 3966 Score = 163 bits (82), Expect = 1e-36 Identities = 173/202 (85%), Gaps = 2/202 (0%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 |||||||||||||| |||||||||||||| |||||||||||||| |||| || || Sbjct: 3088 atgcagatcttcgtcaagaccctcaccggaaagaccatcacccttgaggtggaaagctct 3147 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||| Sbjct: 3148 gacaccatcgacaacgtcaaggccaagatccaggacaaggaaggaattcccccggaccag 3207 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 || | | ||||| |||| | || |||||||| || || ||||| ||||| || | ||||| Sbjct: 3208 caac-gtctcatctttgcc-ggaaagcagctcgaggacggccgtaccctcgccgactaca 3265 Query: 649 acatccagaaggggtcacccct 670 |||||||||||| |||| |||| Sbjct: 3266 acatccagaaggagtcaaccct 3287
>emb|AL356460.3|HS84M10 Homo sapiens chromosome 17 from PAC 84M10 map17p11.2 region D17S842-D17S953, complete sequence Length = 161943 Score = 335 bits (169), Expect = 1e-88 Identities = 372/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| || | Sbjct: 7589 atgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagt 7530 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 7529 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccccgaccag 7470 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||| || ||| ||||||||||| Sbjct: 7469 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 7410 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 7409 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 7350 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 7349 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 7290 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 7289 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 7231 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 7230 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 7172 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 7171 agtcgaccctgcacctgg 7154 Score = 319 bits (161), Expect = 8e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 7361 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 7302 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 7301 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 7242 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 7241 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 7182 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 7181 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 7122 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 7121 gtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaa 7062 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| ||||| ||||||||| || ||||| Sbjct: 7061 aatgtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagagg-ctcat 7003 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 7002 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 6946 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Minus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| || | Sbjct: 7133 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 7074 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || ||||||||||| |||||| Sbjct: 7073 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 7014 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 7013 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 6954 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 6953 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 6907
>emb|X04803.2|HSYUBG1 Homo sapiens ubiquitin gene Length = 3107 Score = 335 bits (169), Expect = 1e-88 Identities = 372/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| || | Sbjct: 2083 atgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagt 2142 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 2143 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccccgaccag 2202 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||| || ||| ||||||||||| Sbjct: 2203 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 2262 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 2263 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 2322 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| Sbjct: 2323 gtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 2382 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 2383 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 2441 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 2442 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 2500 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 2501 agtcgaccctgcacctgg 2518 Score = 311 bits (157), Expect = 2e-81 Identities = 369/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 2311 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 2370 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 2371 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 2430 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 2431 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 2490 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 2491 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 2550 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||| | ||| | ||||||||||| Sbjct: 2551 gtgaagaccctgaccggcaagaccatcactctggaagtggagcccagtgacaccatcgaa 2610 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| || || ||||||||| || ||||| Sbjct: 2611 aatgtgaaggccaagatccaagataaagaaggcatccctcccgaccagcagagg-ctcat 2669 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 2670 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 2728 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 2729 agtcgaccctgcacctgg 2746 Score = 188 bits (95), Expect = 2e-44 Identities = 194/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || || || ||| || | Sbjct: 2539 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaagtggagcccagt 2598 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || |||||||| || |||||| Sbjct: 2599 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatccctcccgaccag 2658 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 2659 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 2718 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||||||||| ||||| |||||||| || ||||| |||||||| Sbjct: 2719 atccagaaggagtcgaccctgcacctggtcctgcgcctgaggggtgg 2765
>gb|M18159.1|PIGUBP Pig poly-ubiquitin mRNA, 3' end Length = 832 Score = 335 bits (169), Expect = 1e-88 Identities = 359/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | || || |||||||||||||| || || ||| || Sbjct: 306 gatgcagatcttcgtgaagaccttgactggtaagaccatcaccctggaagtggagcccag 365 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| ||||| || ||||||||||||||||| |||||||| ||||||||||| ||||| Sbjct: 366 cgacaccatcgagaatgtcaaggcgaagatccaagacaaggaaggcatccccccagacca 425 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || |||||||| || || || |||||||| |||||||||| Sbjct: 426 gcagaggctgatctttgccgggaagcagctggaagatgggcgcaccctgtctgactacaa 485 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 486 catccagaaggagtccaccctgcacctggtcctccgcctcagaggtgggatgcagatctt 545 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | || || ||||||||||||||||| | ||| | ||||||||||| Sbjct: 546 cgtgaagaccttgactggtaagaccatcaccctggaagtggagcccagcgacaccatcga 605 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||||||||||||||||||||| ||||| ||||| ||||||||| || || | Sbjct: 606 gaacgtcaaggcgaagatccaggacaaggaaggcatccccccagaccagcagagg-ctga 664 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| |||||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 665 tctttgccggg-aagcagctggaagatgggcgcaccctgtctgactacaacatccagaag 723 Query: 660 g 660 | Sbjct: 724 g 724 Score = 323 bits (163), Expect = 5e-85 Identities = 371/439 (84%), Gaps = 2/439 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | || || |||||||||||||| || || ||| || Sbjct: 78 gatgcagatcttcgtgaagaccttgactggtaagaccatcaccctggaagtggagcccag 137 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| ||||| || ||||||||||||||||| |||||||| ||||||||||| ||||| Sbjct: 138 cgacaccatcgagaatgtcaaggcgaagatccaagacaaggaaggcatccccccagacca 197 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || |||||||| || || || |||||||| |||||||||| Sbjct: 198 gcagaggctgatctttgccgggaagcagctggaagatgggcgcaccctgtctgactacaa 257 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||| Sbjct: 258 catccagaaggagtccaccctgcacctggtcctccgcctcagaggtgggatgcagatctt 317 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||| | || || ||||||||||||||||| | ||| | ||||||||||| Sbjct: 318 cgtgaagaccttgactggtaagaccatcaccctggaagtggagcccagcgacaccatcga 377 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || ||||||||||||||||| |||||||| ||||| ||||| ||||||||| || || | Sbjct: 378 gaatgtcaaggcgaagatccaagacaaggaaggcatccccccagaccagcagagg-ctga 436 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| |||| |||||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 437 tctttgccggg-aagcagctggaagatgggcgcaccctgtctgactacaacatccagaag 495 Query: 660 gggtcacccctgcccctgg 678 | ||| |||||| ||||| Sbjct: 496 gagtccaccctgcacctgg 514 Score = 220 bits (111), Expect = 6e-54 Identities = 238/279 (85%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 400 cgcacccttgctgactacaacatccagaaggagtccaccctccacctggtgctccgcctc 459 |||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 10 cgcaccctgtctgactacaacatccagaaggagtccaccctgcacctggtcctccgcctc 69 Query: 460 aggggtggtatgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggt 519 || ||||| ||||||||||||||||||||| | || || ||||||||||||||||| | Sbjct: 70 agaggtgggatgcagatcttcgtgaagaccttgactggtaagaccatcaccctggaagtg 129 Query: 520 gagtcttcggacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattccc 579 ||| | ||||||||||| || ||||||||||||||||| |||||||| ||||| ||| Sbjct: 130 gagcccagcgacaccatcgagaatgtcaaggcgaagatccaagacaaggaaggcatcccc 189 Query: 580 ccggaccagcagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttg 639 || ||||||||| || || || |||| |||| |||||||| || ||||| || ||||| Sbjct: 190 ccagaccagcagagg-ctgatctttgccggg-aagcagctggaagatgggcgcaccctgt 247 Query: 640 ctgnctacaacatccagaaggggtcacccctgcccctgg 678 ||| ||||||||||||||||| ||| |||||| ||||| Sbjct: 248 ctgactacaacatccagaaggagtccaccctgcacctgg 286 Score = 186 bits (94), Expect = 8e-44 Identities = 181/210 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||| | || || |||||||||||||| || || ||| || Sbjct: 534 gatgcagatcttcgtgaagaccttgactggtaagaccatcaccctggaagtggagcccag 593 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 594 cgacaccatcgagaacgtcaaggcgaagatccaggacaaggaaggcatccccccagacca 653 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||| || |||||||| || || || |||||||| |||||||||| Sbjct: 654 gcagaggctgatctttgccgggaagcagctggaagatgggcgcaccctgtctgactacaa 713 Query: 420 catccagaaggagtccaccctccacctggt 449 ||||||||||||||||||||| ||| |||| Sbjct: 714 catccagaaggagtccaccctgcacttggt 743
>gb|DQ216248.1| Taeniopygia guttata clone 0058P0029E05 ubiquitin C variant 8-like mRNA, complete sequence Length = 1378 Score = 333 bits (168), Expect = 5e-88 Identities = 306/352 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| || |||||||| |||||||||||||||||||| || ||||| || Sbjct: 524 gatgcagatcttcgtcaagaccctgaccggcaagaccatcaccctggaacttgagcccag 583 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| ||||||||||||||||| ||||| ||||| ||||| Sbjct: 584 tgacaccatcgagaacgtcaaggccaagatccaggacaaggaaggcattccccccgacca 643 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||||||||||||||| || || ||||||||||| |||||||||| Sbjct: 644 gcagaggctgatctttgctggcaagcagctggaagatggccgcaccctgtctgactacaa 703 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct: 704 catccagaaggaatccaccctgcacctggtgctgcgcctcaggggtgggatgcagatctt 763 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||| |||||||| ||||||||||||||||| || |||| ||| | |||||||| || Sbjct: 764 cgtcaagaccctgaccggcaagaccatcactcttgaggtggagcccagtgacaccattga 823 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || || ||||| ||||||||||||||||| |||||||| || ||||||||| Sbjct: 824 aaatgtgaaggccaagatccaggacaaggaaggcattccaccagaccagcag 875 Score = 309 bits (156), Expect = 8e-81 Identities = 356/421 (84%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| | ||| | ||||||||||||||| ||| || Sbjct: 296 gatgcagatctttgtgaagaccctgagcggggggggcatcacccttgaggtggagcccag 355 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||| || || || || ||| | Sbjct: 356 tgacaccatcgagaatgtcaaggccaagatccaggacaaggaaggtattcctcctgacaa 415 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || ||||||||||| |||||||| || || || |||||||| | |||||||| Sbjct: 416 gcagaggctgatctttgctggtaagcagctggaagatgggcgcaccctgtcagactacaa 475 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||| |||||||| ||||||||||| ||||||| ||||| ||||||||||| Sbjct: 476 tatccagaaggaatccaccctgcacctggtgctgcgcctcaaaggtgggatgcagatctt 535 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||| |||||||| ||||||||||||||||||||||| |||| | ||||||||||| Sbjct: 536 cgtcaagaccctgaccggcaagaccatcaccctggaacttgagcccagtgacaccatcga 595 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| ||||||||||||||||| ||||||||||| ||||||||| || || | Sbjct: 596 gaacgtcaaggccaagatccaggacaaggaaggcattccccccgaccagcagagg-ctga 654 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| ||| |||||||||||||||| Sbjct: 655 tctttg-ctggcaagcagctggaagatggccgcaccctgtctgactacaacatccagaag 713 Query: 660 g 660 | Sbjct: 714 g 714 Score = 291 bits (147), Expect = 2e-75 Identities = 300/351 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||||||||| ||| || | Sbjct: 69 atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggtggagcccagt 128 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 129 gacaccattgaaaatgtcaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| ||||| || |||||||| | ||||||||| Sbjct: 189 cagaggctgatctttgctggcaagcagctggaggatgggcgcaccctctccgactacaac 248 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| || |||||||||||||| |||||||||||||| ||||||||||| Sbjct: 249 atccagaaagagtcaactctccacctggtgctgcgcctcaggggtgggatgcagatcttt 308 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| | ||| | ||||||||| |||| ||| | ||||||||||| Sbjct: 309 gtgaagaccctgagcggggggggcatcacccttgaggtggagcccagtgacaccatcgag 368 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || |||||||| ||||||||||||||||| || ||||| || ||| ||||| Sbjct: 369 aatgtcaaggccaagatccaggacaaggaaggtattcctcctgacaagcag 419 Score = 268 bits (135), Expect = 3e-68 Identities = 367/443 (82%), Gaps = 2/443 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| || |||||||| ||||||||||||||||| |||||||| ||| || Sbjct: 752 gatgcagatcttcgtcaagaccctgaccggcaagaccatcactcttgaggtggagcccag 811 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || || ||||| ||||||||||||||||| ||||| || || ||||| Sbjct: 812 tgacaccattgaaaatgtgaaggccaagatccaggacaaggaaggcattccaccagacca 871 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || || || ||||| |||||||| ||||| || || || | | |||||||| Sbjct: 872 gcagaggctgattttcgctggtaagcagctggaggatggtcgtactttgtccgactacaa 931 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||| || || |||||||||||||| ||||||||||| Sbjct: 932 catccagaaggaatccaccctgcaccttgtcctgcgcctcaggggtgggatgcagatctt 991 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || |||||||||||||||||||| | |||| | ||||||||||| Sbjct: 992 cgtgaagaccctgactggcaagaccatcaccctggaagttgagcccagtgacaccatcga 1051 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||| || || || || ||||||||| || || | Sbjct: 1052 gaatgtcaaggccaagatccaggacaaggaaggtatccctcctgaccagcagagg-ctga 1110 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | ||| | ||||||||||| || ||||| || ||||| | | |||||||||||||||| Sbjct: 1111 t-tttcgctggcaagcagctggaagatgggcgcaccctctccgactacaacatccagaag 1169 Query: 660 gggtcacccctgcccctggngct 682 | |||| | |||| ||||| ||| Sbjct: 1170 gagtcaactctgcacctggtgct 1192 Score = 198 bits (100), Expect = 2e-47 Identities = 196/228 (85%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || ||||||||||||||||| || |||||| || Sbjct: 980 gatgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaagttgagcccag 1039 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||| || ||||| || ||||| Sbjct: 1040 tgacaccatcgagaatgtcaaggccaagatccaggacaaggaaggtatccctcctgacca 1099 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || || || |||||||||||||| || || || |||||||| | |||||||| Sbjct: 1100 gcagaggctgattttcgctggcaagcagctggaagatgggcgcaccctctccgactacaa 1159 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 ||||||||||||||| || || ||||||||||| |||||||||||||| Sbjct: 1160 catccagaaggagtcaactctgcacctggtgctgcgcctcaggggtgg 1207 Score = 129 bits (65), Expect = 2e-26 Identities = 160/190 (84%), Gaps = 2/190 (1%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||||||||| ||||||||||| || ||||||||||||||||| |||| ||| | Sbjct: 69 atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggtggagcccagt 128 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 |||||||| || || |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129 gacaccattgaaaatgtcaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||| || || || |||| | ||||||||||| || ||||| || ||||| | | ||||| Sbjct: 189 cagagg-ctgatctttg-ctggcaagcagctggaggatgggcgcaccctctccgactaca 246 Query: 649 acatccagaa 658 |||||||||| Sbjct: 247 acatccagaa 256
>gb|DQ216246.1| Taeniopygia guttata clone 0058P0016A01 ubiquitin C variant 7-like mRNA, complete sequence Length = 1377 Score = 333 bits (168), Expect = 5e-88 Identities = 359/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| || Sbjct: 752 gatgcagatctttgtgaagaccctgaccggcaagaccatcactcttgaggtggagcccag 811 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||||||||| || ||||| || ||||| Sbjct: 812 tgacaccattgaaaatgtcaaggccaagatccaggacaaggaaggtatccctcctgacca 871 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || ||||| |||||||||||||| || || || |||||||| |||||||||| Sbjct: 872 gcagaggctgatcttcgctggcaagcagctggaagatgggcgcaccctctctgactacaa 931 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| || |||||||| || |||||||| |||||||||||||| ||||||||||| Sbjct: 932 catccagaaagaatccaccctgcatctggtgctgcgcctcaggggtgggatgcagatctt 991 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||| |||||||| || |||||||||||||||||||| | |||| | ||||||||||| Sbjct: 992 cgtcaagaccctgactggcaagaccatcaccctggaagttgagcccagcgacaccatcga 1051 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||| ||||| ||||||||||| ||||||||| || || | Sbjct: 1052 gaatgtcaaggccaagatccaggataaggaaggcattcccccagaccagcagagg-ctga 1110 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | ||| | ||||||||||| || ||||| || ||||| | | |||||||||||||||| Sbjct: 1111 t-tttcgctggcaagcagctggaagatgggcgcaccctctccgactacaacatccagaag 1169 Query: 660 g 660 | Sbjct: 1170 g 1170 Score = 325 bits (164), Expect = 1e-85 Identities = 358/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| |||||||||||||||||||| || |||||| || Sbjct: 296 gatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagttgagcccag 355 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || || ||||| |||||||||||||||||||||||||| || ||||| Sbjct: 356 tgacaccattgaaaatgtgaaggccaagatccaggacaaggagggcatccctcctgacca 415 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || ||||||||||| |||||||| ||||| || |||||||| | |||||||| Sbjct: 416 gcagaggctgatctttgctggtaagcagctggaggatgggcgcaccctctccgactacaa 475 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 476 catccagaaggaatccaccctgcacctggtgctgcgcctgagaggtgggatgcagatctt 535 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| ||||||||||||||||||||||| | |||| | |||||||| || Sbjct: 536 tgtgaagaccctgaccggcaagaccatcaccctggaagttgagcccagcgacaccattga 595 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||| || || || || ||||||||| || || | Sbjct: 596 aaatgtcaaggccaagatccaggacaaggaaggtatccctcctgaccagcagagg-ctga 654 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || ||||| || ||||| | | |||||||||||||||| Sbjct: 655 tctttg-ctggcaagcagctggaagatgggcgcaccctctcagactacaacatccagaag 713 Query: 660 g 660 | Sbjct: 714 g 714 Score = 315 bits (159), Expect = 1e-82 Identities = 356/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||||||||| ||| || | Sbjct: 69 atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggtggagcccagt 128 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 129 gacaccattgaaaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || |||||||| || || ||||||||||| | ||||||||| Sbjct: 189 cagaggctgatctttgccggtaagcagctggaagatggccgcaccctgtccgactacaac 248 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 || ||||||||||| || || ||||||||||| ||||| || ||||| |||||||||||| Sbjct: 249 attcagaaggagtcaactctgcacctggtgctgcgcctgagaggtgggatgcagatcttc 308 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | |||| | |||||||| || Sbjct: 309 gtgaagaccctgaccggcaagaccatcaccctggaagttgagcccagtgacaccattgaa 368 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||||||||| || || ||||||||| || || || Sbjct: 369 aatgtgaaggccaagatccaggacaaggagggcatccctcctgaccagcagagg-ctgat 427 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | || |||||||| || ||||| || ||||| | | ||||||||||||||||| Sbjct: 428 ctttg-ctggtaagcagctggaggatgggcgcaccctctccgactacaacatccagaagg 486 Score = 297 bits (150), Expect = 3e-77 Identities = 353/419 (84%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| |||||||||||||||||||| || |||||| || Sbjct: 524 gatgcagatctttgtgaagaccctgaccggcaagaccatcaccctggaagttgagcccag 583 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| || || || |||||||| ||||||||||||||||| || ||||| || ||||| Sbjct: 584 cgacaccattgaaaatgtcaaggccaagatccaggacaaggaaggtatccctcctgacca 643 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||||||||||||||| || || || |||||||| | |||||||| Sbjct: 644 gcagaggctgatctttgctggcaagcagctggaagatgggcgcaccctctcagactacaa 703 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 704 catccagaaggaatccaccctgcacctggtgctgcgcctgagaggtgggatgcagatctt 763 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| ||||||||||||||||| || |||| ||| | |||||||| || Sbjct: 764 tgtgaagaccctgaccggcaagaccatcactcttgaggtggagcccagtgacaccattga 823 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||| || || || || ||||||||| || || | Sbjct: 824 aaatgtcaaggccaagatccaggacaaggaaggtatccctcctgaccagcagagg-ctga 882 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | || | | ||||||||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 883 tcttcg-ctggcaagcagctggaagatgggcgcaccctctctgactacaacatccagaa 940 Score = 190 bits (96), Expect = 5e-45 Identities = 195/228 (85%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| || |||||||| || ||||||||||||||||| || |||||| || Sbjct: 980 gatgcagatcttcgtcaagaccctgactggcaagaccatcaccctggaagttgagcccag 1039 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| ||||| || |||||||| ||||||||||| ||||| ||||| ||||| ||||| Sbjct: 1040 cgacaccatcgagaatgtcaaggccaagatccaggataaggaaggcattcccccagacca 1099 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || || || |||||||||||||| || || || |||||||| | |||||||| Sbjct: 1100 gcagaggctgattttcgctggcaagcagctggaagatgggcgcaccctctccgactacaa 1159 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 1160 catccagaaggaatccaccctgcacctggtgctgcgcctcaggggtgg 1207
>ref|XM_847967.1| PREDICTED: Canis familiaris similar to CG11624-PA, isoform A (LOC610457), mRNA Length = 1286 Score = 333 bits (168), Expect = 5e-88 Identities = 358/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||| | || || |||||||||||||| ||||| ||| || | Sbjct: 524 atgcagatcttcgtgaagaccttgacgggtaagaccatcaccctggaggtggagcccagt 583 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 584 gacaccatcgagaacgtcaaggcgaagatccaggacaaggagggcatcccccctgaccag 643 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | | |||||||| ||||| ||||| || || || |||||||| | ||||||||| Sbjct: 644 cagaggttgatctttgccggcaaacagctggaagatgggcgcaccctgtccgactacaac 703 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||||||||| || |||||||| || ||||||||||| || |||||||||||| Sbjct: 704 atccagaaggagtccactctgcacctggtccttcgcctcagggggggcatgcagatcttc 763 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | || || ||||||||||||||||||| ||| | ||||||||||| Sbjct: 764 gtgaagaccttgacgggtaagaccatcaccctggaggtggagcccagtgacaccatcgag 823 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||||||||||||||||||||||||||| ||||| ||||||||| || | || Sbjct: 824 aacgtcaaggcgaagatccaggacaaggagggcatcccccctgaccagcagagg-ttgat 882 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||| ||||| || ||||| || ||||| | | ||||||||||||||||| Sbjct: 883 ctttgcc-ggcaaacagctggaagatgggcgcaccctgtccgactacaacatccagaagg 941 Score = 333 bits (168), Expect = 5e-88 Identities = 358/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||| | || || |||||||||||||| ||||| ||| || | Sbjct: 296 atgcagatcttcgtgaagaccttgacgggtaagaccatcaccctggaggtggagcccagt 355 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 356 gacaccatcgagaacgtcaaggcgaagatccaggacaaggagggcatcccccctgaccag 415 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | | |||||||| ||||| ||||| || || || |||||||| | ||||||||| Sbjct: 416 cagaggttgatctttgccggcaaacagctggaagatgggcgcaccctgtccgactacaac 475 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||||||||| || |||||||| || ||||||||||| || |||||||||||| Sbjct: 476 atccagaaggagtccactctgcacctggtccttcgcctcagggggggcatgcagatcttc 535 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | || || ||||||||||||||||||| ||| | ||||||||||| Sbjct: 536 gtgaagaccttgacgggtaagaccatcaccctggaggtggagcccagtgacaccatcgag 595 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||||||||||||||||||||||||||| ||||| ||||||||| || | || Sbjct: 596 aacgtcaaggcgaagatccaggacaaggagggcatcccccctgaccagcagagg-ttgat 654 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||| ||||| || ||||| || ||||| | | ||||||||||||||||| Sbjct: 655 ctttgcc-ggcaaacagctggaagatgggcgcaccctgtccgactacaacatccagaagg 713 Score = 333 bits (168), Expect = 5e-88 Identities = 358/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||| | || || |||||||||||||| ||||| ||| || | Sbjct: 68 atgcagatcttcgtgaagaccttgacgggtaagaccatcaccctggaggtggagcccagt 127 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 128 gacaccatcgagaacgtcaaggcgaagatccaggacaaggagggcatcccccctgaccag 187 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | | |||||||| ||||| ||||| || || || |||||||| | ||||||||| Sbjct: 188 cagaggttgatctttgccggcaaacagctggaagatgggcgcaccctgtccgactacaac 247 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||||||||| || |||||||| || ||||||||||| || |||||||||||| Sbjct: 248 atccagaaggagtccactctgcacctggtccttcgcctcagggggggcatgcagatcttc 307 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | || || ||||||||||||||||||| ||| | ||||||||||| Sbjct: 308 gtgaagaccttgacgggtaagaccatcaccctggaggtggagcccagtgacaccatcgag 367 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||||||||||||||||||||||||||| ||||| ||||||||| || | || Sbjct: 368 aacgtcaaggcgaagatccaggacaaggagggcatcccccctgaccagcagagg-ttgat 426 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||| ||||| || ||||| || ||||| | | ||||||||||||||||| Sbjct: 427 ctttgcc-ggcaaacagctggaagatgggcgcaccctgtccgactacaacatccagaagg 485 Score = 325 bits (164), Expect = 1e-85 Identities = 357/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||| | || || |||||||||||||| ||||| ||| || | Sbjct: 752 atgcagatcttcgtgaagaccttgacgggtaagaccatcaccctggaggtggagcccagt 811 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 812 gacaccatcgagaacgtcaaggcgaagatccaggacaaggagggcatcccccctgaccag 871 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | | |||||||| ||||| ||||| || || || |||||||| | ||||||||| Sbjct: 872 cagaggttgatctttgccggcaaacagctggaagatgggcgcaccctgtccgactacaac 931 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||||||||| || |||||||| || ||||||||||| || |||||||||||| Sbjct: 932 atccagaaggagtccactctgcacctggtccttcgcctcagggggggcatgcagatcttc 991 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | || || ||||||||||||||||||| ||| | ||||||||||| Sbjct: 992 gtgaagaccttgacgggtaagaccatcaccctggaggtggagcccagtgacaccatcgag 1051 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||||||||||||||||||||||||||| ||||| ||||||||| || | || Sbjct: 1052 aacgttaaggcgaagatccaggacaaggagggcatcccccctgaccagcagagg-ttgat 1110 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||| ||||| || ||||| || ||||| | | ||||||||||||||||| Sbjct: 1111 ctttgcc-ggcaaacagctggaagatgggcgcaccctgtccgactacaacatccagaagg 1169 Score = 170 bits (86), Expect = 5e-39 Identities = 167/194 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||| | || || |||||||||||||| ||||| ||| || | Sbjct: 980 atgcagatcttcgtgaagaccttgacgggtaagaccatcaccctggaggtggagcccagt 1039 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1040 gacaccatcgagaacgttaaggcgaagatccaggacaaggagggcatcccccctgaccag 1099 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | | |||||||| ||||| ||||| || || || |||||||| | ||||||||| Sbjct: 1100 cagaggttgatctttgccggcaaacagctggaagatgggcgcaccctgtccgactacaac 1159 Query: 421 atccagaaggagtc 434 |||||||||||||| Sbjct: 1160 atccagaaggagtc 1173
>gb|M88684.1|AGLPOLYUBI Aglaothamnion neglectum ubiquitin mRNA, complete cds Length = 1520 Score = 331 bits (167), Expect = 2e-87 Identities = 358/420 (85%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||| | || ||||||||||||||||| ||||| ||||| ||| Sbjct: 574 atgcagatctttgtgaagaccattacgggcaagaccatcaccctggaggtcgagtcttct 633 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||| | ||||| ||||| ||||| |||||||| ||||||||| Sbjct: 634 gacaccattgagaatgtgaagaccaagattcaggataaggaaggcatcccgccggaccag 693 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||| |||||||| ||||||||||| || |||||||||||||| ||||||||||| Sbjct: 694 cagcgccttatctttgccggcaagcagctggaagacggccgcaccctgtctgactacaac 753 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| || || |||||||| || || | | ||||||||||| || ||| Sbjct: 754 atccagaaagagtcgactctgcacctggtcctgcgtttgcgaggtggtatgcaaattttc 813 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| || || |||||||| ||||| || |||| ||||| || ||||| ||||| Sbjct: 814 gtgaagacgctgacgggcaagacgatcacgctcgaggtggagtcgtctgacacgatcgag 873 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||| ||||||||||||| |||||||||||||||||||| ||||||| ||||||| Sbjct: 874 aacgtgaagacgaagatccaggataaggagggcattcccccggatcagcagc-gcctcat 932 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | ||||||||||||| || |||||||| |||||| ||| ||||||| ||||||||| Sbjct: 933 cttcg-cgggcaagcagctcgaggatggccgcaccctttctgactacaacctccagaagg 991 Score = 315 bits (159), Expect = 1e-82 Identities = 356/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||| ||||| || |||||||||||||| ||||| |||||||| Sbjct: 118 atgcagatctttgtgaagacgctcacgggtaagaccatcaccctggaggtcgagtcctcg 177 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||||||| | ||||||||||| |||||||| ||||| ||||||||| Sbjct: 178 gacactatcgagaacgtcaagaccaagatccaggataaggagggtatcccgccggaccag 237 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||| ||||| || ||||||||||| |||||||||||||| || | ||||||||| Sbjct: 238 cagcgcctgatcttcgcgggcaagcagctcgaggacggccgcacgctatccgactacaac 297 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 | ||||||||||| || ||||||||||| || || || | || |||||||| ||||| Sbjct: 298 aatcagaaggagtcgacgctccacctggtcctgcgtctgcgtggcggtatgcaaatcttt 357 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||||| ||||| ||||||||||| || Sbjct: 358 gtgaagacccttacgggcaagaccatcaccctggaggtcgagtcctcggacaccattgag 417 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||| | ||||| ||||| |||||||| || || ||||||||||||| ||||||| Sbjct: 418 aatgtgaagaccaagattcaggataaggagggaatcccgccggaccagcagc-gcctcat 476 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | ||||||||||||| || || ||||| || || | | |||||||||||| |||| Sbjct: 477 cttcg-cgggcaagcagctcgaggacggccgcacgctgtccgactacaacatccaaaagg 535 Score = 305 bits (154), Expect = 1e-79 Identities = 353/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||| Sbjct: 346 atgcaaatctttgtgaagacccttacgggcaagaccatcaccctggaggtcgagtcctcg 405 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||| | ||||| ||||| |||||||| ||||| ||||||||| Sbjct: 406 gacaccattgagaatgtgaagaccaagattcaggataaggagggaatcccgccggaccag 465 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||||||||| || ||||||||||| |||||||||||||| || | ||||||||| Sbjct: 466 cagcgcctcatcttcgcgggcaagcagctcgaggacggccgcacgctgtccgactacaac 525 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||| ||||| || || || || |||||||||||||| | || || ||||||||||| Sbjct: 526 atccaaaaggaatcgacgctgcatctggtgctccgcctgcgcggaggcatgcagatcttt 585 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | || |||||||||||||||||||||| |||||||| |||||||| || Sbjct: 586 gtgaagaccattacgggcaagaccatcaccctggaggtcgagtcttctgacaccattgag 645 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||| | ||||| ||||| ||||| ||||| || ||||||||||||| |||| || Sbjct: 646 aatgtgaagaccaagattcaggataaggaaggcatcccgccggaccagcagc-gccttat 704 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || || ||||| ||||| ||| ||||||||||||||| Sbjct: 705 ctttgcc-ggcaagcagctggaagacggccgcaccctgtctgactacaacatccagaa 761 Score = 232 bits (117), Expect = 1e-57 Identities = 285/341 (83%) Strand = Plus / Plus Query: 253 gtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctctgacacgatcgac 312 |||||||| || || |||||||| ||||| || ||||| ||||| |||||||||||||| Sbjct: 814 gtgaagacgctgacgggcaagacgatcacgctcgaggtggagtcgtctgacacgatcgag 873 Query: 313 aacgtcaaggcgaagatccaggacaaggagggcatccccccggaccagcagcgcctcatc 372 ||||| ||| ||||||||||||| ||||||||||| |||||||| ||||||||||||||| Sbjct: 874 aacgtgaagacgaagatccaggataaggagggcattcccccggatcagcagcgcctcatc 933 Query: 373 tttgctggcaagcagcttgaggacggccgcacccttgctgactacaacatccagaaggag 432 || || ||||||||||| ||||| |||||||||||| ||||||||||| |||||||||| Sbjct: 934 ttcgcgggcaagcagctcgaggatggccgcaccctttctgactacaacctccagaaggaa 993 Query: 433 tccaccctccacctggtgctccgcctcaggggtggtatgcagatcttcgtgaagaccctc 492 || ||||| || |||| || || || | || || ||||||||||| |||||||| || Sbjct: 994 tcgaccctgcatttggtcctgcgtctgcgtggaggcatgcagatctttgtgaagacgctg 1053 Query: 493 accggcaagaccatcaccctggagggtgagtcttcggacaccatcgacaacgtcaaggcg 552 || |||||||| ||||| || |||| ||||| |||||||| || || || || ||| | Sbjct: 1054 acgggcaagacgatcacgctcgaggtggagtcgtcggacactattgagaatgtgaagaca 1113 Query: 553 aagatccaggacaaggagggcattcccccggaccagcagcg 593 ||||| ||||| ||||| || || || |||||||||||||| Sbjct: 1114 aagattcaggataaggaaggtatcccgccggaccagcagcg 1154 Score = 228 bits (115), Expect = 2e-56 Identities = 345/420 (82%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||||||||| || || |||||||| ||||| || ||||| ||||| || Sbjct: 1030 atgcagatctttgtgaagacgctgacgggcaagacgatcacgctcgaggtggagtcgtcg 1089 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||| | ||||| ||||| ||||| || ||||| ||||||||| Sbjct: 1090 gacactattgagaatgtgaagacaaagattcaggataaggaaggtatcccgccggaccag 1149 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||| | |||||||| ||||||||||| |||||||| ||||| ||| | ||||| || Sbjct: 1150 cagcgcttgatctttgcgggcaagcagctcgaggacggtcgcactctttccgactataat 1209 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| || || || || || || ||||| | ||||| |||||||||||| Sbjct: 1210 atccagaaggagtcgacgctgcatctcgttcttcgcctgcgtggtggaatgcagatcttc 1269 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||| || || || || ||||| ||||| || || | |||||| || ||||| ||||| Sbjct: 1270 gtgaaaacgctgacgggtaagactatcacgctcgaagttgagtcgtccgacactatcgaa 1329 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||| |||||||||||||||||||||| ||||| ||||||||||||| | ||||| Sbjct: 1330 aacgtgaagacgaagatccaggacaaggagggaattcctccggaccagcagc-gtctcat 1388 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | || |||||||| || ||||| || || || ||| ||||||||||||||||| Sbjct: 1389 cttcg-ctggaaagcagctcgaggatgggcgcacgctctctgactacaacatccagaagg 1447 Score = 172 bits (87), Expect = 1e-39 Identities = 183/215 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| || || || || ||||| ||||| || || |||||||| || Sbjct: 1258 atgcagatcttcgtgaaaacgctgacgggtaagactatcacgctcgaagttgagtcgtcc 1317 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||| |||||||||||||||||||||| || || ||||||||| Sbjct: 1318 gacactatcgaaaacgtgaagacgaagatccaggacaaggagggaattcctccggaccag 1377 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| |||||||| ||||| |||||||| ||||| || ||||| || ||||||||||| Sbjct: 1378 cagcgtctcatcttcgctggaaagcagctcgaggatgggcgcacgctctctgactacaac 1437 Query: 421 atccagaaggagtccaccctccacctggtgctccg 455 |||||||||||||| || ||||| || |||||||| Sbjct: 1438 atccagaaggagtctacgctccatctcgtgctccg 1472
>ref|XM_415105.1| PREDICTED: Gallus gallus ubiquitin (LOC396190), mRNA Length = 1349 Score = 329 bits (166), Expect = 9e-87 Identities = 374/442 (84%), Gaps = 2/442 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||| | || ||||||||||||||||| ||||| ||| || | Sbjct: 739 atgcagatctttgtgaagaccttgacaggcaagaccatcaccctggaggtcgagcccagt 798 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||||||||| ||||| || ||| Sbjct: 799 gacaccattgagaacgtgaaggccaagatccaggacaaggagggcattccccccgatcag 858 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| || || || ||||| || | ||||||||| Sbjct: 859 cagaggctgatctttgctggcaagcagctggaagatgggcgcactctgtccgactacaac 918 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||||| Sbjct: 919 atccagaaggagtccaccctgcacctggtgctgcgcctcaggggagggatgcagatcttt 978 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | || |||||||||||||||||||||| || | |||||||| || Sbjct: 979 gtgaagaccttgactggcaagaccatcaccctggaggtggaacccagcgacaccattgag 1038 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||||||||||||||| || || ||| || || || Sbjct: 1039 aacgtgaaggccaagatccaggacaaggagggcattccccccgatcaacagagg-ctgat 1097 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || ||||| || ||||| ||| ||||||||||||||||| Sbjct: 1098 ctttg-ctggcaagcagctggaagatggacgcaccctgtctgactacaacatccagaagg 1156 Query: 661 ggtcacccctgcccctggngct 682 ||| |||||| ||||| ||| Sbjct: 1157 agtccaccctgcacctggtgct 1178 Score = 313 bits (158), Expect = 5e-82 Identities = 372/442 (84%), Gaps = 2/442 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||||||||| ||||||||||||||| | ||||| || || | Sbjct: 511 atgcagatcttcgtgaagaccctcactggcaagaccatcaccttggaggtggaacccagt 570 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || ||||| || |||||||| ||||||||||||||||||||||| ||||| || ||| Sbjct: 571 gataccatcgagaatgtcaaggccaagatccaggacaaggagggcattccccccgatcag 630 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||| |||||||||||||| || ||||| |||||||| | ||||||||| Sbjct: 631 cagaggctgatcttcgctggcaagcagctggaagacgggcgcaccctgtccgactacaac 690 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||||||||| ||||| || || || |||||||||||||| ||||||||||| Sbjct: 691 atccagaaggagtccactctccatcttgtcctgcgcctcaggggtggcatgcagatcttt 750 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 751 gtgaagaccttgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgag 810 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||||||||||||||| || |||||| || || || Sbjct: 811 aacgtgaaggccaagatccaggacaaggagggcattccccccgatcagcagagg-ctgat 869 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || ||||| || || || | | ||||||||||||||||| Sbjct: 870 ctttg-ctggcaagcagctggaagatgggcgcactctgtccgactacaacatccagaagg 928 Query: 661 ggtcacccctgcccctggngct 682 ||| |||||| ||||| ||| Sbjct: 929 agtccaccctgcacctggtgct 950 Score = 218 bits (110), Expect = 2e-53 Identities = 200/230 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||| | || ||||||||||||||||| ||||| || || Sbjct: 966 gatgcagatctttgtgaagaccttgactggcaagaccatcaccctggaggtggaacccag 1025 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| || || ||||| ||||| ||||||||||||||||||||||| ||||| || || Sbjct: 1026 cgacaccattgagaacgtgaaggccaagatccaggacaaggagggcattccccccgatca 1085 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 ||| | || |||||||||||||||||||| || || || |||||||| |||||||||| Sbjct: 1086 acagaggctgatctttgctggcaagcagctggaagatggacgcaccctgtctgactacaa 1145 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggta 469 ||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 1146 catccagaaggagtccaccctgcacctggtgctgcgcctcaggggtggta 1195
>emb|X58195.1|GGPOUBII G.gallus DNA for polyubiquitin gene Ub II Length = 1483 Score = 329 bits (166), Expect = 9e-87 Identities = 374/442 (84%), Gaps = 2/442 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||| | || ||||||||||||||||| ||||| ||| || | Sbjct: 680 atgcagatctttgtgaagaccttgacaggcaagaccatcaccctggaggtcgagcccagt 739 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||||||||| ||||| || ||| Sbjct: 740 gacaccattgagaacgtgaaggccaagatccaggacaaggagggcattccccccgatcag 799 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| || || || ||||| || | ||||||||| Sbjct: 800 cagaggctgatctttgctggcaagcagctggaagatgggcgcactctgtccgactacaac 859 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||||| Sbjct: 860 atccagaaggagtccaccctgcacctggtgctgcgcctcaggggagggatgcagatcttt 919 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | || |||||||||||||||||||||| || | |||||||| || Sbjct: 920 gtgaagaccttgactggcaagaccatcaccctggaggtggaacccagcgacaccattgag 979 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||||||||||||||| || || ||| || || || Sbjct: 980 aacgtgaaggccaagatccaggacaaggagggcattccccccgatcaacagagg-ctgat 1038 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || ||||| || ||||| ||| ||||||||||||||||| Sbjct: 1039 ctttg-ctggcaagcagctggaagatggacgcaccctgtctgactacaacatccagaagg 1097 Query: 661 ggtcacccctgcccctggngct 682 ||| |||||| ||||| ||| Sbjct: 1098 agtccaccctgcacctggtgct 1119 Score = 313 bits (158), Expect = 5e-82 Identities = 372/442 (84%), Gaps = 2/442 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||||||||| ||||||||||||||| | ||||| || || | Sbjct: 452 atgcagatcttcgtgaagaccctcactggcaagaccatcaccttggaggtggaacccagt 511 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || ||||| || |||||||| ||||||||||||||||||||||| ||||| || ||| Sbjct: 512 gataccatcgagaatgtcaaggccaagatccaggacaaggagggcattccccccgatcag 571 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||| |||||||||||||| || ||||| |||||||| | ||||||||| Sbjct: 572 cagaggctgatcttcgctggcaagcagctggaagacgggcgcaccctgtccgactacaac 631 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||||||||| ||||| || || || |||||||||||||| ||||||||||| Sbjct: 632 atccagaaggagtccactctccatcttgtcctgcgcctcaggggtggcatgcagatcttt 691 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||| | || |||||||||||||||||||||| ||| | |||||||| || Sbjct: 692 gtgaagaccttgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgag 751 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||||||||||||||| || |||||| || || || Sbjct: 752 aacgtgaaggccaagatccaggacaaggagggcattccccccgatcagcagagg-ctgat 810 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || ||||| || || || | | ||||||||||||||||| Sbjct: 811 ctttg-ctggcaagcagctggaagatgggcgcactctgtccgactacaacatccagaagg 869 Query: 661 ggtcacccctgcccctggngct 682 ||| |||||| ||||| ||| Sbjct: 870 agtccaccctgcacctggtgct 891 Score = 218 bits (110), Expect = 2e-53 Identities = 200/230 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||| | || ||||||||||||||||| ||||| || || Sbjct: 907 gatgcagatctttgtgaagaccttgactggcaagaccatcaccctggaggtggaacccag 966 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| || || ||||| ||||| ||||||||||||||||||||||| ||||| || || Sbjct: 967 cgacaccattgagaacgtgaaggccaagatccaggacaaggagggcattccccccgatca 1026 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 ||| | || |||||||||||||||||||| || || || |||||||| |||||||||| Sbjct: 1027 acagaggctgatctttgctggcaagcagctggaagatggacgcaccctgtctgactacaa 1086 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggta 469 ||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 1087 catccagaaggagtccaccctgcacctggtgctgcgcctcaggggtggta 1136
>gb|DQ216240.1| Taeniopygia guttata clone 0061P0001C12 ubiquitin C variant 2-like mRNA, complete sequence Length = 1530 Score = 327 bits (165), Expect = 3e-86 Identities = 360/422 (85%), Gaps = 3/422 (0%) Strand = Plus / Plus Query: 240 gatgcagat-ctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 ||||||||| ||||||||||||||| || |||||||||||||| || ||||| ||| || Sbjct: 752 gatgcagatnctttgtgaagaccctgactggcaagaccatcactctcgaggtggagccca 811 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 |||||| ||||| || |||||||| |||||||||||||||||||||||||| || |||| Sbjct: 812 gtgacaccatcgagaatgtcaaggccaagatccaggacaaggagggcatccctcctgacc 871 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 ||||| | || |||||||||||||||||||| || || || |||||||| | ||||||| Sbjct: 872 agcagaggctgatctttgctggcaagcagctggaagatgggcgcaccctctccgactaca 931 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 ||||||||||||| |||||||| ||||| || || |||||||||||||| |||||||||| Sbjct: 932 acatccagaaggaatccaccctgcaccttgtcctgcgcctcaggggtgggatgcagatct 991 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | ||||||||||| || |||||||||||||| || |||| ||| | |||||||||| Sbjct: 992 ttgtgaagaccctgactggcaagaccatcactctcgaggtggagcccagtgacaccatcg 1051 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 | || |||||||| ||||||||||||||||| ||||||||||| ||||||||| || || Sbjct: 1052 agaatgtcaaggccaagatccaggacaaggaaggcattcccccagaccagcagagg-ctg 1110 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| | ||||||||||| || ||||| || ||||| | | ||||||||||||||| Sbjct: 1111 atctttg-ctggcaagcagctggaggatgggcgcaccctctccgactacaacatccagaa 1169 Query: 659 gg 660 || Sbjct: 1170 gg 1171 Score = 299 bits (151), Expect = 8e-78 Identities = 354/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| || | Sbjct: 69 atgcagatctttgtgaagaccctgaccggcaagaccatcacccttgaggtggagcccagt 128 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 129 gacaccattgaaaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||| |||||||| || || ||||||||||| ||||||||||| Sbjct: 189 cagaggctgatctttgctggtaagcagctggaagatggccgcaccctctctgactacaac 248 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| || || ||||||||||| ||||| || ||||| |||||||| ||| Sbjct: 249 atccagaaagagtcaactctgcacctggtgctgcgcctgagaggtgggatgcagattttc 308 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||| ||||| ||||||||||||||||| || |||| ||| | |||||||| || Sbjct: 309 gtgaaaaccctgaccggcaagaccatcactctcgaggtggagcccagtgacaccattgaa 368 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||| || || || || ||||||||| || || || Sbjct: 369 aatgtgaaggccaagatccaggacaaggaaggtatccctcctgaccagcagagg-ctgat 427 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || ||||| || ||||| | | ||||||||||||||||| Sbjct: 428 ctttg-ctggcaagcagctggaagatgggcgcaccctgtcagactacaacatccagaagg 486 Score = 287 bits (145), Expect = 3e-74 Identities = 355/422 (84%), Gaps = 3/422 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| || |||||||| |||||||||||||||||||| || |||||| || Sbjct: 524 gatgcagatcttcgtcaagaccctgaccggcaagaccatcaccctggaagttgagcccag 583 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||| ||||| || ||||| || ||||| Sbjct: 584 tgacaccattgagaatgtcaaggccaagatccaggataaggaaggtatccctcctgacca 643 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||||||||||||||| || || || |||||||| |||||||||| Sbjct: 644 gcagaggctgatctttgctggcaagcagctggaagatgggcgcaccctgtctgactacaa 703 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagat-ct 478 ||||||||||||||| || || ||||| || || |||||||||||||| |||||||| || Sbjct: 704 catccagaaggagtcaactctgcaccttgtcctgcgcctcaggggtgggatgcagatnct 763 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 | ||||||||||| || |||||||||||||| || |||| ||| | |||||||||| Sbjct: 764 ttgtgaagaccctgactggcaagaccatcactctcgaggtggagcccagtgacaccatcg 823 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 | || |||||||| ||||||||||||||||||||||| || || ||||||||| || || Sbjct: 824 agaatgtcaaggccaagatccaggacaaggagggcatccctcctgaccagcagagg-ctg 882 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || |||| | ||||||||||| || ||||| || ||||| | | ||||||||||||||| Sbjct: 883 atctttg-ctggcaagcagctggaagatgggcgcaccctctccgactacaacatccagaa 941 Query: 659 gg 660 || Sbjct: 942 gg 943 Score = 287 bits (145), Expect = 3e-74 Identities = 357/426 (83%), Gaps = 2/426 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 ||||||||| || ||||| ||||| ||||||||||||||||| || ||||| ||| || Sbjct: 296 gatgcagattttcgtgaaaaccctgaccggcaagaccatcactctcgaggtggagcccag 355 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || || ||||| ||||||||||||||||| || ||||| || ||||| Sbjct: 356 tgacaccattgaaaatgtgaaggccaagatccaggacaaggaaggtatccctcctgacca 415 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||||||||||||||| || || || |||||||| | |||||||| Sbjct: 416 gcagaggctgatctttgctggcaagcagctggaagatgggcgcaccctgtcagactacaa 475 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 476 catccagaaggaatccaccctgcacctggtgctgcgcctgagaggtgggatgcagatctt 535 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||| |||||||| ||||||||||||||||||||||| | |||| | |||||||| || Sbjct: 536 cgtcaagaccctgaccggcaagaccatcaccctggaagttgagcccagtgacaccattga 595 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||| ||||| || || || || ||||||||| || || | Sbjct: 596 gaatgtcaaggccaagatccaggataaggaaggtatccctcctgaccagcagagg-ctga 654 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 655 tctttg-ctggcaagcagctggaagatgggcgcaccctgtctgactacaacatccagaag 713 Query: 660 gggtca 665 | |||| Sbjct: 714 gagtca 719 Score = 222 bits (112), Expect = 1e-54 Identities = 199/228 (87%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || |||||||||||||| || ||||| ||| || Sbjct: 981 gatgcagatctttgtgaagaccctgactggcaagaccatcactctcgaggtggagcccag 1040 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||| ||||| ||||| ||||| Sbjct: 1041 tgacaccatcgagaatgtcaaggccaagatccaggacaaggaaggcattcccccagacca 1100 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||||||||||||||| ||||| || |||||||| | |||||||| Sbjct: 1101 gcagaggctgatctttgctggcaagcagctggaggatgggcgcaccctctccgactacaa 1160 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||||||| |||||||| ||||| || || |||||||||||||| Sbjct: 1161 catccagaaggaatccaccctgcaccttgtcctgcgcctcaggggtgg 1208 Score = 139 bits (70), Expect = 2e-29 Identities = 179/214 (83%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||||||||| ||||||||||| |||||||||||||||||||| |||| ||| | Sbjct: 69 atgcagatctttgtgaagaccctgaccggcaagaccatcacccttgaggtggagcccagt 128 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 |||||||| || || || ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129 gacaccattgaaaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||| || || || |||| | || |||||||| || |||||||| ||||| ||| ||||| Sbjct: 189 cagagg-ctgatctttg-ctggtaagcagctggaagatggccgcaccctctctgactaca 246 Query: 649 acatccagaaggggtcacccctgcccctggngct 682 |||||||||| | |||| | |||| ||||| ||| Sbjct: 247 acatccagaaagagtcaactctgcacctggtgct 280
>gb|DQ393578.1| Metarhizium anisopliae polyubiquitin mRNA, complete cds Length = 1194 Score = 327 bits (165), Expect = 3e-86 Identities = 306/353 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| |||||||| || || ||||| |||||||||||||| |||||||| ||||| || Sbjct: 105 atgcaaatctttgtcaaaactctcacgggcaagaccatcactcttgaggtcgagtcgtcc 164 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| || ||| ||||||| |||||||||||||| ||||| || ||||| Sbjct: 165 gacaccatcgacaatgttaagtcgaagattcaggacaaggagggtatcccgcctgaccaa 224 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||| | || || |||||||||||||||||||| ||||| ||||| | || |||||| Sbjct: 225 cagcgcttaattttcgctggcaagcagcttgaggatggccgtaccctctcggattacaac 284 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||| |||||||| ||||| || |||||||| | |||||||||||||||||| Sbjct: 285 atccagaaggaatccacccttcacctcgttctccgccttcgtggtggtatgcagatcttc 344 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||||||||| |||||||||||||| |||| ||||| || |||||||||||| Sbjct: 345 gtcaagaccctcaccggaaagaccatcaccctcgaggtggagtcatccgacaccatcgac 404 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcg 593 ||||||||| |||||||||||||||||||||| ||||| || ||||| ||||| Sbjct: 405 aacgtcaagtcgaagatccaggacaaggagggtattcctcccgaccaacagcg 457 Score = 184 bits (93), Expect = 3e-43 Identities = 279/341 (81%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||||||||| |||||||||||||| ||||| ||||| || Sbjct: 333 atgcagatcttcgtcaagaccctcaccggaaagaccatcaccctcgaggtggagtcatcc 392 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||||||||||||| |||||||||||||||||||||| || || || ||||| Sbjct: 393 gacaccatcgacaacgtcaagtcgaagatccaggacaaggagggtattcctcccgaccaa 452 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||| || || |||||||| |||||||| || |||||||| || | ||||| || Sbjct: 453 cagcgcctgattttcgctggcaaacagcttgaagatggccgcacactgtccgactataat 512 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||| ||||||||||| || || || || || || || | ||||||||||| |||||| Sbjct: 513 atccaaaaggagtccactctacatcttgtcctgcgacttcgtggtggtatgcaaatcttc 572 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| | || || ||||| ||||| | || | ||||| |||||||| || ||| Sbjct: 573 gtcaagactttgactggaaagacaatcacgttagaagtcgagtcctcggacacgattgac 632 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattccccc 581 || ||||| | ||||| ||||| || || ||||||||||| Sbjct: 633 aatgtcaaatcaaagattcaggataaagaaggcattccccc 673 Score = 115 bits (58), Expect = 2e-22 Identities = 241/302 (79%) Strand = Plus / Plus Query: 292 gagtcctctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatcccc 351 |||||||| |||||||| ||||| ||||| | ||||| ||||| || || ||||| ||| Sbjct: 612 gagtcctcggacacgattgacaatgtcaaatcaaagattcaggataaagaaggcattccc 671 Query: 352 ccggaccagcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgct 411 || || || ||||| || ||||||||||| |||||||| ||||||||||| || || || Sbjct: 672 cccgatcaacagcgtcttatctttgctggtaagcagctcgaggacggccgaacgctgtct 731 Query: 412 gactacaacatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatg 471 || |||||||| ||||||||||| || |||||||| || || || || | ||||||||| Sbjct: 732 gattacaacattcagaaggagtctactctccaccttgtcctgcgacttcgtggtggtatg 791 Query: 472 cagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggac 531 || |||||||| ||||| | || |||||||| ||||| |||| | || || || Sbjct: 792 caaatcttcgtcaagactttgactggcaagactatcacattggaagtggaatccagcgat 851 Query: 532 accatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || || ||||| |||||| | ||||| || |||||||| ||||||||||| ||||| ||| Sbjct: 852 actattgacaatgtcaagtcaaagattcaagacaaggaaggcattccccctgaccaacag 911 Query: 592 cg 593 || Sbjct: 912 cg 913 Score = 97.6 bits (49), Expect = 6e-17 Identities = 156/192 (81%), Gaps = 2/192 (1%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||| ||||| || || || ||||| |||||||||||||| || |||| ||||| || Sbjct: 105 atgcaaatctttgtcaaaactctcacgggcaagaccatcactcttgaggtcgagtcgtcc 164 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 |||||||||||||| || ||| ||||||| |||||||||||||| || || || ||||| Sbjct: 165 gacaccatcgacaatgttaagtcgaagattcaggacaaggagggtatcccgcctgaccaa 224 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||||| || | ||| | |||||||||||||| |||||||| ||||| | | |||| Sbjct: 225 cagcg--cttaattttcgctggcaagcagcttgaggatggccgtaccctctcggattaca 282 Query: 649 acatccagaagg 660 |||||||||||| Sbjct: 283 acatccagaagg 294 Score = 85.7 bits (43), Expect = 2e-13 Identities = 103/123 (83%) Strand = Plus / Plus Query: 310 gacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccagcagcgcctc 369 ||||| |||||| | ||||| || |||||||| ||||| ||||| ||||| ||||| || Sbjct: 858 gacaatgtcaagtcaaagattcaagacaaggaaggcattccccctgaccaacagcgtctt 917 Query: 370 atctttgctggcaagcagcttgaggacggccgcacccttgctgactacaacatccagaag 429 |||||||||||||||||||| || ||||| |||||||| ||||| || ||||||||| Sbjct: 918 atctttgctggcaagcagctggaagacggtcgcaccctcagcgactataatatccagaag 977 Query: 430 gag 432 ||| Sbjct: 978 gag 980
>gb|AY034031.1| Alstroemeria hybrid cultivar 'Samora' ubiquitin mRNA, partial cds Length = 278 Score = 327 bits (165), Expect = 3e-86 Identities = 243/269 (90%) Strand = Plus / Plus Query: 325 aagatccaggacaaggagggcatccccccggaccagcagcgcctcatctttgctggcaag 384 ||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| Sbjct: 4 aagatccaggacaaggagggcatcccccctgaccagcagcgtctcatctttgccggcaag 63 Query: 385 cagcttgaggacggccgcacccttgctgactacaacatccagaaggagtccaccctccac 444 ||||||||||| || || ||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 64 cagcttgaggatgggcgtaccctggctgattacaacatccagaaggagtccaccctccac 123 Query: 445 ctggtgctccgcctcaggggtggtatgcagatcttcgtgaagaccctcaccggcaagacc 504 ||||||||| ||| | ||||||||||||||||| || ||||||||||| ||||||||| Sbjct: 124 tcggtgctccgtctccgtggtggtatgcagatctttgttaagaccctcactggcaagacc 183 Query: 505 atcaccctggagggtgagtcttcggacaccatcgacaacgtcaaggcgaagatccaggac 564 |||||||| |||| |||| || |||||||| ||||| ||||||||||||||||||||| Sbjct: 184 atcacccttgaggttgagagctctgacaccattgacaatgtcaaggcgaagatccaggac 243 Query: 565 aaggagggcattcccccggaccagcagcg 593 ||||||||||| ||||| ||||||||||| Sbjct: 244 aaggagggcatcccccctgaccagcagcg 272 Score = 184 bits (93), Expect = 3e-43 Identities = 117/125 (93%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 148 atgcagatctttgttaagaccctcactggcaagaccatcacccttgaggttgagagctct 207 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 208 gacaccattgacaatgtcaaggcgaagatccaggacaaggagggcatcccccctgaccag 267 Query: 361 cagcg 365 ||||| Sbjct: 268 cagcg 272 Score = 103 bits (52), Expect = 9e-19 Identities = 95/108 (87%), Gaps = 2/108 (1%) Strand = Plus / Plus Query: 553 aagatccaggacaaggagggcattcccccggaccagcagcggcctcatntttgncgggca 612 ||||||||||||||||||||||| ||||| ||||||||||| | |||| |||| ||| || Sbjct: 4 aagatccaggacaaggagggcatcccccctgaccagcagcgtc-tcatctttgccgg-ca 61 Query: 613 agcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||||||||| ||||| || ||||| |||| |||||||||||||||| Sbjct: 62 agcagcttgaggatgggcgtaccctggctgattacaacatccagaagg 109 Score = 48.1 bits (24), Expect = 0.047 Identities = 27/28 (96%) Strand = Plus / Plus Query: 721 accctcactggcaagaacatcacccttg 748 |||||||||||||||| ||||||||||| Sbjct: 166 accctcactggcaagaccatcacccttg 193
>gb|DQ216249.1| Taeniopygia guttata clone 0058P0031D03 ubiquitin C variant 9-like mRNA, complete sequence Length = 1327 Score = 325 bits (164), Expect = 1e-85 Identities = 358/421 (85%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| |||||||||||||||||||| || |||||| || Sbjct: 524 gatgcagatctttgtgaagaccctgaccggcaagaccatcaccctggaagttgagcccag 583 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| || || || |||||||| ||||||||||||||||| || ||||| || ||||| Sbjct: 584 cgacaccattgaaaatgtcaaggccaagatccaggacaaggaaggtatccctcctgacca 643 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||||||||||||||| || || || |||||||| | |||||||| Sbjct: 644 gcagaggctgatctttgctggcaagcagctggaagatgggcgcaccctctcagactacaa 703 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| || |||||||| || |||||||| |||||||||||||| |||||||| || Sbjct: 704 catccagaaagaatccaccctgcatctggtgctgcgcctcaggggtgggatgcagatttt 763 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||| |||||||| || |||||||||||||||||||| | |||| | ||||||||||| Sbjct: 764 cgtcaagaccctgactggcaagaccatcaccctggaagttgagcccagcgacaccatcga 823 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||| ||||| ||||||||||| ||||||||| || || | Sbjct: 824 gaatgtcaaggccaagatccaggataaggaaggcattcccccagaccagcagagg-ctga 882 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | ||| | ||||||||||| || ||||| || |||||| | | |||||||||||||||| Sbjct: 883 t-tttcgctggcaagcagctggaagatgggcgcaccctttccgactacaacatccagaag 941 Query: 660 g 660 | Sbjct: 942 g 942 Score = 321 bits (162), Expect = 2e-84 Identities = 356/419 (84%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| |||||||||||||||||||| || |||||| || Sbjct: 296 gatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagttgagcccag 355 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || || ||||| |||||||||||||||||||||||||| || ||||| Sbjct: 356 tgacaccattgaaaatgtgaaggccaagatccaggacaaggagggcatccctcctgacca 415 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || ||||||||||| |||||||| ||||| || |||||||| | |||||||| Sbjct: 416 gcagaggctgatctttgctggtaagcagctggaggatgggcgcaccctctccgactacaa 475 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 476 catccagaaggaatccaccctgcacctggtgctgcgcctgagaggtgggatgcagatctt 535 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| ||||||||||||||||||||||| | |||| | |||||||| || Sbjct: 536 tgtgaagaccctgaccggcaagaccatcaccctggaagttgagcccagcgacaccattga 595 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||| || || || || ||||||||| || || | Sbjct: 596 aaatgtcaaggccaagatccaggacaaggaaggtatccctcctgaccagcagagg-ctga 654 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | ||||||||||| || ||||| || ||||| | | ||||||||||||||| Sbjct: 655 tctttg-ctggcaagcagctggaagatgggcgcaccctctcagactacaacatccagaa 712 Score = 315 bits (159), Expect = 1e-82 Identities = 356/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||||||||| ||| || | Sbjct: 69 atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggtggagcccagt 128 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 129 gacaccattgaaaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || |||||||| || || ||||||||||| | ||||||||| Sbjct: 189 cagaggctgatctttgccggtaagcagctggaagatggccgcaccctgtccgactacaac 248 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 || ||||||||||| || || ||||||||||| ||||| || ||||| |||||||||||| Sbjct: 249 attcagaaggagtcaactctgcacctggtgctgcgcctgagaggtgggatgcagatcttc 308 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||| | |||| | |||||||| || Sbjct: 309 gtgaagaccctgaccggcaagaccatcaccctggaagttgagcccagtgacaccattgaa 368 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||||||||| || || ||||||||| || || || Sbjct: 369 aatgtgaaggccaagatccaggacaaggagggcatccctcctgaccagcagagg-ctgat 427 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | || |||||||| || ||||| || ||||| | | ||||||||||||||||| Sbjct: 428 ctttg-ctggtaagcagctggaggatgggcgcaccctctccgactacaacatccagaagg 486 Score = 190 bits (96), Expect = 5e-45 Identities = 195/228 (85%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 ||||||||| || || |||||||| || ||||||||||||||||| || |||||| || Sbjct: 752 gatgcagattttcgtcaagaccctgactggcaagaccatcaccctggaagttgagcccag 811 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| ||||| || |||||||| ||||||||||| ||||| ||||| ||||| ||||| Sbjct: 812 cgacaccatcgagaatgtcaaggccaagatccaggataaggaaggcattcccccagacca 871 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || || || |||||||||||||| || || || ||||||||| | |||||||| Sbjct: 872 gcagaggctgattttcgctggcaagcagctggaagatgggcgcaccctttccgactacaa 931 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 932 catccagaaggaatccaccctgcacctggtgctgcgcctcaggggtgg 979
>gb|DQ216245.1| Taeniopygia guttata clone 0065P0025D10 ubiquitin C variant 5-like mRNA, complete sequence Length = 1438 Score = 325 bits (164), Expect = 1e-85 Identities = 305/352 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||| ||||| || |||||||||||||| |||||||| ||| || Sbjct: 413 gatgcagatctttgtgaaaaccctgactggcaagaccatcactcttgaggtggagcccag 472 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 473 tgacaccatcgagaacgtcaaggccaagatccaggacaaggagggcattcccccagacca 532 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || || || |||||||||||||| || || || |||||||| |||||||||| Sbjct: 533 gcagaggctgattttcgctggcaagcagctggaagatgggcgcaccctgtctgactacaa 592 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| || |||||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct: 593 catccagaaagaatccaccctgcacctggtgctgcgcctcaggggtgggatgcagatctt 652 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||| |||||||| ||||||||||||||||| || |||| ||| | |||||||| || Sbjct: 653 cgtcaagaccctgaccggcaagaccatcactctcgaggtggagcccagtgacaccattga 712 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || || ||||| ||||||||||||||||| ||||||||||| ||||||||| Sbjct: 713 aaatgtgaaggccaagatccaggacaaggaaggcattcccccagaccagcag 764 Score = 321 bits (162), Expect = 2e-84 Identities = 356/419 (84%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| || |||||| || Sbjct: 185 gatgcagatctttgtgaagaccctgactggcaagaccatcaccctggaagttgagcccag 244 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || || ||||| ||||||||||||||||| || ||||| || ||||| Sbjct: 245 tgacaccattgaaaatgtgaaggccaagatccaggacaaggaaggtatccctcctgacca 304 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || ||||||||||| ||||| || ||||| || |||||||| |||||||||| Sbjct: 305 gcagaggctgatctttgctggtaagcaactggaggatgggcgcaccctctctgactacaa 364 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 365 catccagaaggaatccaccctgcacctggtgctgcgcctgagaggtgggatgcagatctt 424 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||| ||||| || |||||||||||||| || |||| ||| | ||||||||||| Sbjct: 425 tgtgaaaaccctgactggcaagaccatcactcttgaggtggagcccagtgacaccatcga 484 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| ||||||||||||||||||||||||||||| ||||||||| || || | Sbjct: 485 gaacgtcaaggccaagatccaggacaaggagggcattcccccagaccagcagagg-ctga 543 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | ||| | ||||||||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 544 t-tttcgctggcaagcagctggaagatgggcgcaccctgtctgactacaacatccagaa 601 Score = 283 bits (143), Expect = 5e-73 Identities = 369/443 (83%), Gaps = 2/443 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| || |||||||| ||||||||||||||||| || ||||| ||| || Sbjct: 641 gatgcagatcttcgtcaagaccctgaccggcaagaccatcactctcgaggtggagcccag 700 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || || ||||| ||||||||||||||||| ||||| ||||| ||||| Sbjct: 701 tgacaccattgaaaatgtgaaggccaagatccaggacaaggaaggcattcccccagacca 760 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || || || ||||| |||||||| ||||| || || || | | |||||||| Sbjct: 761 gcagaggctgattttcgctggtaagcagctggaggatggtcgtactttgtccgactacaa 820 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||| || || |||||||||||||| ||||||||||| Sbjct: 821 catccagaaggaatccaccctgcaccttgtcctgcgcctcaggggtgggatgcagatctt 880 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || |||||||||||||||||||| | |||| | ||||||||||| Sbjct: 881 cgtgaagaccctgactggcaagaccatcaccctggaagttgagcccagtgacaccatcga 940 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || || ||||| ||||||||||||||||| ||||||||||| ||||||||| || || | Sbjct: 941 gaatgtgaaggccaagatccaggacaaggaaggcattcccccagaccagcagagg-ctga 999 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | ||| | ||||||||||| || ||||| || ||||| | | |||||||||||||||| Sbjct: 1000 t-tttcgctggcaagcagctggaagatgggcgcaccctgtccgactacaacatccagaag 1058 Query: 660 gggtcacccctgcccctggngct 682 | |||| | |||| ||||| ||| Sbjct: 1059 gagtcaactctgcacctggtgct 1081 Score = 238 bits (120), Expect = 2e-59 Identities = 302/361 (83%), Gaps = 2/361 (0%) Strand = Plus / Plus Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || || ||||| ||||||||||||||||| || ||||| || ||||| Sbjct: 17 tgacaccatcgagaatgtgaaggccaagatccaggacaaggaaggtatccctcctgacca 76 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||||||||||||||| || || || |||||||| |||||||||| Sbjct: 77 gcagaggctgatctttgctggcaagcagctggaagatgggcgcaccctgtctgactacaa 136 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 137 catccagaaggaatccaccctgcacctggtgctgcgcctgagaggtgggatgcagatctt 196 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||| | |||| | |||||||| || Sbjct: 197 tgtgaagaccctgactggcaagaccatcaccctggaagttgagcccagtgacaccattga 256 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || || ||||| ||||||||||||||||| || || || || ||||||||| || || | Sbjct: 257 aaatgtgaaggccaagatccaggacaaggaaggtatccctcctgaccagcagagg-ctga 315 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | || ||||| || || ||||| || ||||| ||| |||||||||||||||| Sbjct: 316 tctttg-ctggtaagcaactggaggatgggcgcaccctctctgactacaacatccagaag 374 Query: 660 g 660 | Sbjct: 375 g 375 Score = 198 bits (100), Expect = 2e-47 Identities = 196/228 (85%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || ||||||||||||||||| || |||||| || Sbjct: 869 gatgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaagttgagcccag 928 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || || ||||| ||||||||||||||||| ||||| ||||| ||||| Sbjct: 929 tgacaccatcgagaatgtgaaggccaagatccaggacaaggaaggcattcccccagacca 988 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || || || |||||||||||||| || || || |||||||| | |||||||| Sbjct: 989 gcagaggctgattttcgctggcaagcagctggaagatgggcgcaccctgtccgactacaa 1048 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 ||||||||||||||| || || ||||||||||| |||||||||||||| Sbjct: 1049 catccagaaggagtcaactctgcacctggtgctgcgcctcaggggtgg 1096
>dbj|D10432.1|RICK37 Oryza sativa mRNA for ubiquitin (K37 gene), partial sequence Length = 413 Score = 325 bits (164), Expect = 1e-85 Identities = 271/304 (89%), Gaps = 2/304 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||| || Sbjct: 111 atgcagatcttcgtgaagaccctcaccggcaagaccaccaccctggaggttgagtcgcct 170 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||||||||| || ||||| |||||||||||||||||||| || || || |||||| Sbjct: 171 gacacgatcgacaatgtgaaggccaagatccaggacaaggagggtattccaccagaccag 230 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||| ||||||| |||||||||||||||||||| || ||||||||||| || ||| || Sbjct: 231 cagcgc-tcatcttcgctggcaagcagcttgaggatggtcgcacccttgcagattactac 289 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| ||||| || || ||||| | || ||||||||||||||| Sbjct: 290 atccagaaggagtccaccctgcaccttgtcctgcgccttcgtggaggtatgcagatcttc 349 Query: 481 gtgaagaccctcaccggcaagaccatcaccct-ggagggtgagtcttcggacaccatcga 539 |||||||||||||| |||||||||||||| || ||||| |||||| || ||||||||||| Sbjct: 350 gtgaagaccctcactggcaagaccatcactctgggaggttgagtcctctgacaccatcga 409 Query: 540 caac 543 |||| Sbjct: 410 caac 413 Score = 268 bits (135), Expect = 3e-68 Identities = 257/295 (87%), Gaps = 4/295 (1%) Strand = Plus / Plus Query: 367 ctcatctttgctggcaagcagc-ttgaggacggccgcacccttgctgactacaacatcca 425 |||||||| ||||||||| || |||||||||||||||||||||||||||| |||||||| Sbjct: 8 ctcatcttcgctggcaagatgccttgaggacggccgcacccttgctgactataacatcca 67 Query: 426 gaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttcgtgaa 485 ||||||||||||| | ||| |||| |||||||| | || |||||||||||||||||||| Sbjct: 68 gaaggagtccaccttgcacttggtcctccgccttcgtggaggtatgcagatcttcgtgaa 127 Query: 486 gaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgacaacgt 545 |||||||||||||||||||| ||||||||||| |||||| | ||||| |||||||| || Sbjct: 128 gaccctcaccggcaagaccaccaccctggaggttgagtcgcctgacacgatcgacaatgt 187 Query: 546 caaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcatntttg 605 ||||| |||||||||||||||||||| ||||| || ||||||||||| ||||| || | Sbjct: 188 gaaggccaagatccaggacaaggagggtattccaccagaccagcagcg--ctcatcttcg 245 Query: 606 ncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 | |||||||||||||| ||||| || |||||||| | ||| |||||||||||| Sbjct: 246 -ctggcaagcagcttgaggatggtcgcacccttgcagattactacatccagaagg 299
>gb|DQ216233.1| Taeniopygia guttata clone 0063P0008C04 ubiquitin C variant 1-like mRNA, complete sequence Length = 1305 Score = 323 bits (163), Expect = 5e-85 Identities = 374/443 (84%), Gaps = 2/443 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| || |||||| || Sbjct: 524 gatgcagatctttgtgaagaccctgactggcaagaccatcaccctggaagttgagcccag 583 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || || ||||| ||||||||||||||||| || ||||| || ||||| Sbjct: 584 tgacaccattgaaaatgtgaaggccaagatccaggacaaggaaggtatccctcctgacca 643 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || ||||||||||| ||||| || ||||| || |||||||| |||||||||| Sbjct: 644 gcagaggctgatctttgctggtaagcaactggaggatgggcgcaccctctctgactacaa 703 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||| || || |||||||||||||| ||||||||||| Sbjct: 704 catccagaaggaatccaccctgcaccttgtcctgcgcctcaggggtgggatgcagatctt 763 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || ||||||||||||||| |||| | |||| | ||||||||||| Sbjct: 764 cgtgaagaccctgactggcaagaccatcaccttggaagttgagcccagtgacaccatcga 823 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || || ||||| ||||||||||||||||| ||||||||||| ||||||||| || || | Sbjct: 824 gaatgtgaaggccaagatccaggacaaggaaggcattcccccagaccagcagagg-ctga 882 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | ||| | ||||||||||| || ||||| || ||||| | | |||||||||||||||| Sbjct: 883 t-tttcgctggcaagcagctggaagatgggcgcaccctgtccgactacaacatccagaag 941 Query: 660 gggtcacccctgcccctggngct 682 | |||| | |||| ||||| ||| Sbjct: 942 gagtcaactctgcacctggtgct 964 Score = 307 bits (155), Expect = 3e-80 Identities = 355/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||||||||| ||| || | Sbjct: 69 atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggtggagcccagt 128 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 129 gacaccattgaaaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| || || || |||||||| | ||||||||| Sbjct: 189 cagaggctgatctttgctggcaagcagctggaagatgggcgcaccctctccgactacaac 248 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| || || ||||||||||| ||||| || ||||| |||||||||||| Sbjct: 249 atccagaaagagtcaactctgcacctggtgctgcgcctgagaggtgggatgcagatcttc 308 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||| ||||| ||||||||||||||||| || |||| ||| | ||||||||||| Sbjct: 309 gtgaaaaccctgaccggcaagaccatcactctcgaggtggagcccagtgacaccatcgag 368 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||| || || || || ||||||||| || || || Sbjct: 369 aatgtgaaggccaagatccaggacaaggaaggtatccctcctgaccagcagagg-ctgat 427 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || ||||| || ||||| ||| ||||||||||||||||| Sbjct: 428 ctttg-ctggcaagcagctggaagatgggcgcaccctgtctgactacaacatccagaagg 486 Score = 285 bits (144), Expect = 1e-73 Identities = 353/421 (83%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||| ||||| ||||||||||||||||| || ||||| ||| || Sbjct: 296 gatgcagatcttcgtgaaaaccctgaccggcaagaccatcactctcgaggtggagcccag 355 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || || ||||| ||||||||||||||||| || ||||| || ||||| Sbjct: 356 tgacaccatcgagaatgtgaaggccaagatccaggacaaggaaggtatccctcctgacca 415 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||||||||||||||| || || || |||||||| |||||||||| Sbjct: 416 gcagaggctgatctttgctggcaagcagctggaagatgggcgcaccctgtctgactacaa 475 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 476 catccagaaggaatccaccctgcacctggtgctgcgcctgagaggtgggatgcagatctt 535 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||| | |||| | |||||||| || Sbjct: 536 tgtgaagaccctgactggcaagaccatcaccctggaagttgagcccagtgacaccattga 595 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || || ||||| ||||||||||||||||| || || || || ||||||||| || || | Sbjct: 596 aaatgtgaaggccaagatccaggacaaggaaggtatccctcctgaccagcagagg-ctga 654 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | || ||||| || || ||||| || ||||| ||| |||||||||||||||| Sbjct: 655 tctttg-ctggtaagcaactggaggatgggcgcaccctctctgactacaacatccagaag 713 Query: 660 g 660 | Sbjct: 714 g 714 Score = 190 bits (96), Expect = 5e-45 Identities = 195/228 (85%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || ||||||||||||||| | || |||||| || Sbjct: 752 gatgcagatcttcgtgaagaccctgactggcaagaccatcaccttggaagttgagcccag 811 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || || ||||| ||||||||||||||||| ||||| ||||| ||||| Sbjct: 812 tgacaccatcgagaatgtgaaggccaagatccaggacaaggaaggcattcccccagacca 871 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || || || |||||||||||||| || || || |||||||| | |||||||| Sbjct: 872 gcagaggctgattttcgctggcaagcagctggaagatgggcgcaccctgtccgactacaa 931 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 ||||||||||||||| || || ||||||||||| |||||||||||||| Sbjct: 932 catccagaaggagtcaactctgcacctggtgctgcgcctcaggggtgg 979 Score = 123 bits (62), Expect = 1e-24 Identities = 177/214 (82%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||||||||| ||||||||||| || ||||||||||||||||| |||| ||| | Sbjct: 69 atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggtggagcccagt 128 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 |||||||| || || || ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129 gacaccattgaaaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||| || || || |||| | ||||||||||| || ||||| || ||||| | | ||||| Sbjct: 189 cagagg-ctgatctttg-ctggcaagcagctggaagatgggcgcaccctctccgactaca 246 Query: 649 acatccagaaggggtcacccctgcccctggngct 682 |||||||||| | |||| | |||| ||||| ||| Sbjct: 247 acatccagaaagagtcaactctgcacctggtgct 280
>dbj|AK088453.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430018A04 product:ubiquitin polyprotein (heat shock related) (fragment) homolog [Gallus gallus], full insert sequence Length = 704 Score = 321 bits (162), Expect = 2e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 101 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 160 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 161 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 220 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | | |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 221 cagagggtgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 280 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| ||||||| ||||| || |||||||| |||||||||||| Sbjct: 281 atccagaaagagtcaaccctggacctggtcctccgtctgaggggtggcatgcagatcttc 340 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 341 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 400 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 401 aatgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 459 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || || ||| |||||||||||||| Sbjct: 460 ctttgcc-ggcaagcagctggaagatggccgcactctctctgattacaacatccagaa 516 Score = 188 bits (95), Expect = 2e-44 Identities = 185/215 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 329 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 388 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 389 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 448 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || |||||||| || |||| |||||| Sbjct: 449 cagaggctgatctttgccggcaagcagctggaagatggccgcactctctctgattacaac 508 Query: 421 atccagaaggagtccaccctccacctggtgctccg 455 |||||||| ||||| ||||| |||||||| ||||| Sbjct: 509 atccagaaagagtcgaccctgcacctggtcctccg 543 Score = 133 bits (67), Expect = 1e-27 Identities = 170/203 (83%), Gaps = 2/203 (0%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||||||||||||||||||||| |||||||||||||||||||| |||| ||| | Sbjct: 101 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 160 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 ||||||||||| ||||| ||||| ||||||||||| || |||||||| ||||| |||||| Sbjct: 161 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 220 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||| || | || |||| | ||||||||||| || |||||||| ||||| ||| |||| Sbjct: 221 cagagg-gtgatctttgcc-ggcaagcagctggaagatggccgcaccctctctgattaca 278 Query: 649 acatccagaaggggtcacccctg 671 |||||||||| | |||| ||||| Sbjct: 279 acatccagaaagagtcaaccctg 301
>ref|NR_002875.1| Mus musculus gene model 1821, (NCBI) (Gm1821) on chromosome 14 Length = 704 Score = 321 bits (162), Expect = 2e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 101 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 160 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| ||||| ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 161 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 220 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | | |||||||| ||||||||||| || || ||||||||||| |||| |||||| Sbjct: 221 cagagggtgatctttgccggcaagcagctggaagatggccgcaccctctctgattacaac 280 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| ||||||| ||||| || |||||||| |||||||||||| Sbjct: 281 atccagaaagagtcaaccctggacctggtcctccgtctgaggggtggcatgcagatcttc 340 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| Sbjct: 341 gtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag 400 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || |||||||| ||||| ||||||||| || || || Sbjct: 401 aatgtgaaggccaagatccaggataaagagggcatcccccctgaccagcagagg-ctgat 459 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || || ||| |||||||||||||| Sbjct: 460 ctttgcc-ggcaagcagctggaagatggccgcactctctctgattacaacatccagaa 516 Score = 188 bits (95), Expect = 2e-44 Identities = 185/215 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| || | Sbjct: 329 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaggtggagcccagt 388 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || |||||||||||||| |||||| Sbjct: 389 gacaccatcgagaatgtgaaggccaagatccaggataaagagggcatcccccctgaccag 448 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| ||||||||||| || || |||||||| || |||| |||||| Sbjct: 449 cagaggctgatctttgccggcaagcagctggaagatggccgcactctctctgattacaac 508 Query: 421 atccagaaggagtccaccctccacctggtgctccg 455 |||||||| ||||| ||||| |||||||| ||||| Sbjct: 509 atccagaaagagtcgaccctgcacctggtcctccg 543 Score = 133 bits (67), Expect = 1e-27 Identities = 170/203 (83%), Gaps = 2/203 (0%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||||||||||||||||||||| |||||||||||||||||||| |||| ||| | Sbjct: 101 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctagaggtggagcccagt 160 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 ||||||||||| ||||| ||||| ||||||||||| || |||||||| ||||| |||||| Sbjct: 161 gacaccatcgagaacgtgaaggccaagatccaggataaagagggcatcccccctgaccag 220 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||| || | || |||| | ||||||||||| || |||||||| ||||| ||| |||| Sbjct: 221 cagagg-gtgatctttgcc-ggcaagcagctggaagatggccgcaccctctctgattaca 278 Query: 649 acatccagaaggggtcacccctg 671 |||||||||| | |||| ||||| Sbjct: 279 acatccagaaagagtcaaccctg 301
>gb|DQ216237.1| Taeniopygia guttata clone 0058P0020B09 ubiquitin C variant 1-like mRNA, complete sequence Length = 1346 Score = 319 bits (161), Expect = 8e-84 Identities = 361/426 (84%), Gaps = 2/426 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| || |||||| || Sbjct: 524 gatgcagatctttgtgaagaccctgactggcaagaccatcaccctggaagttgagcccag 583 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || || ||||| ||||||||||||||||| || ||||| || ||||| Sbjct: 584 tgacaccattgaaaatgtgaaggccaagatccaggacaaggaaggtatccctcctgacca 643 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || ||||||||||| ||||| || ||||| || |||||||| |||||||||| Sbjct: 644 gcagaggctgatctttgctggtaagcaactggaggatgggcgcaccctctctgactacaa 703 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| || Sbjct: 704 catccagaaggaatccaccctgcacctggtgctgcgcctcaggggtgggatgcagatttt 763 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||| | |||| | ||||||||||| Sbjct: 764 tgtgaagaccctgactggcaagaccatcaccctggaagttgagcccagtgacaccatcga 823 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || || ||||| ||||||||||||||||| ||||||||||| ||||||||| || || | Sbjct: 824 gaatgtgaaggccaagatccaggacaaggaaggcattcccccagaccagcagagg-ctga 882 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | ||| | ||||||||||| || ||||| || ||||| | | ||||||||||||||| Sbjct: 883 t-tttcgctggcaagcagctggaagatgggcgcaccctgtccgattacaacatccagaag 941 Query: 660 gggtca 665 | |||| Sbjct: 942 gagtca 947 Score = 307 bits (155), Expect = 3e-80 Identities = 355/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||||||||| ||| || | Sbjct: 69 atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggtggagcccagt 128 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 129 gacaccattgaaaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| || || || |||||||| | ||||||||| Sbjct: 189 cagaggctgatctttgctggcaagcagctggaagatgggcgcaccctctccgactacaac 248 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| || || ||||||||||| ||||| || ||||| |||||||||||| Sbjct: 249 atccagaaagagtcaactctgcacctggtgctgcgcctgagaggtgggatgcagatcttc 308 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||| ||||| ||||||||||||||||| || |||| ||| | ||||||||||| Sbjct: 309 gtgaaaaccctgaccggcaagaccatcactctcgaggtggagcccagtgacaccatcgag 368 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||| || || || || ||||||||| || || || Sbjct: 369 aatgtgaaggccaagatccaggacaaggaaggtatccctcctgaccagcagagg-ctgat 427 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || ||||| || ||||| ||| ||||||||||||||||| Sbjct: 428 ctttg-ctggcaagcagctggaagatgggcgcaccctgtctgactacaacatccagaagg 486 Score = 285 bits (144), Expect = 1e-73 Identities = 353/421 (83%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||| ||||| ||||||||||||||||| || ||||| ||| || Sbjct: 296 gatgcagatcttcgtgaaaaccctgaccggcaagaccatcactctcgaggtggagcccag 355 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || || ||||| ||||||||||||||||| || ||||| || ||||| Sbjct: 356 tgacaccatcgagaatgtgaaggccaagatccaggacaaggaaggtatccctcctgacca 415 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||||||||||||||| || || || |||||||| |||||||||| Sbjct: 416 gcagaggctgatctttgctggcaagcagctggaagatgggcgcaccctgtctgactacaa 475 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 476 catccagaaggaatccaccctgcacctggtgctgcgcctgagaggtgggatgcagatctt 535 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||| | |||| | |||||||| || Sbjct: 536 tgtgaagaccctgactggcaagaccatcaccctggaagttgagcccagtgacaccattga 595 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || || ||||| ||||||||||||||||| || || || || ||||||||| || || | Sbjct: 596 aaatgtgaaggccaagatccaggacaaggaaggtatccctcctgaccagcagagg-ctga 654 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | || ||||| || || ||||| || ||||| ||| |||||||||||||||| Sbjct: 655 tctttg-ctggtaagcaactggaggatgggcgcaccctctctgactacaacatccagaag 713 Query: 660 g 660 | Sbjct: 714 g 714 Score = 182 bits (92), Expect = 1e-42 Identities = 194/228 (85%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 ||||||||| |||||||||||||| || ||||||||||||||||| || |||||| || Sbjct: 752 gatgcagatttttgtgaagaccctgactggcaagaccatcaccctggaagttgagcccag 811 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || || ||||| ||||||||||||||||| ||||| ||||| ||||| Sbjct: 812 tgacaccatcgagaatgtgaaggccaagatccaggacaaggaaggcattcccccagacca 871 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || || || |||||||||||||| || || || |||||||| | || ||||| Sbjct: 872 gcagaggctgattttcgctggcaagcagctggaagatgggcgcaccctgtccgattacaa 931 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 ||||||||||||||| || | ||||||||||| |||||||||||||| Sbjct: 932 catccagaaggagtcaactttgcacctggtgctgcgcctcaggggtgg 979 Score = 123 bits (62), Expect = 1e-24 Identities = 177/214 (82%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||||||||| ||||||||||| || ||||||||||||||||| |||| ||| | Sbjct: 69 atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggtggagcccagt 128 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 |||||||| || || || ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129 gacaccattgaaaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||| || || || |||| | ||||||||||| || ||||| || ||||| | | ||||| Sbjct: 189 cagagg-ctgatctttg-ctggcaagcagctggaagatgggcgcaccctctccgactaca 246 Query: 649 acatccagaaggggtcacccctgcccctggngct 682 |||||||||| | |||| | |||| ||||| ||| Sbjct: 247 acatccagaaagagtcaactctgcacctggtgct 280
>emb|CR590697.1| full-length cDNA clone CS0DE002YC17 of Placenta of Homo sapiens (human) Length = 652 Score = 319 bits (161), Expect = 8e-84 Identities = 355/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| |||||||||||||||||||| || || ||| || | Sbjct: 48 atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagt 107 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 108 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 167 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 168 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 227 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 228 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 287 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 288 gtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaa 347 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| ||||| ||||||||| || ||||| Sbjct: 348 aatgtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagagg-ctcat 406 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 407 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 463 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| || | Sbjct: 276 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 335 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || ||||||||||| |||||| Sbjct: 336 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccag 395 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 396 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 455 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 456 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 502 Score = 174 bits (88), Expect = 3e-40 Identities = 216/257 (84%), Gaps = 2/257 (0%) Strand = Plus / Plus Query: 422 tccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttcg 481 ||||||||||||| ||||| |||||||| || || || || ||||||||||||||||||| Sbjct: 1 tccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttcg 60 Query: 482 tgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgaca 541 |||||||||| ||||||||||||||||||||||| | ||| | ||||||||||| | Sbjct: 61 tgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgaaa 120 Query: 542 acgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcatn 601 | || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 121 atgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcatc 179 Query: 602 tttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaaggg 661 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 180 tttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagga 238 Query: 662 gtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 239 gtcgaccctgcacctgg 255
>ref|NM_001009117.1| Pan troglodytes ubiquitin B (UBB), mRNA Length = 690 Score = 319 bits (161), Expect = 8e-84 Identities = 370/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| || | Sbjct: 1 atgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagt 60 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| |||||||| || |||||| Sbjct: 61 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcatccctcccgaccag 120 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||| || ||| ||||||||||| Sbjct: 121 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 180 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| || ||||| || || || || |||||||||||||||||| Sbjct: 181 atccagaaggagtcgaccctgcatctggtcctgcgtctgagaggtggtatgcagatcttc 240 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||| | ||| | ||||||||||| Sbjct: 241 gtgaagaccctgactggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 300 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 301 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 359 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 360 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 418 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 419 agtcgaccctgcacctgg 436 Score = 303 bits (153), Expect = 5e-79 Identities = 353/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| || ||||||||||||||||| || || ||| || | Sbjct: 229 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaagtggagcccagt 288 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 289 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 348 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 349 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 408 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 409 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 468 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 469 gtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaa 528 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| || || ||||||||| || ||||| Sbjct: 529 aatgtgaaggccaagatccaagataaagaaggcatccctcccgaccagcagagg-ctcat 587 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 588 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 644 Score = 188 bits (95), Expect = 2e-44 Identities = 194/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| || | Sbjct: 457 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 516 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || |||||||| || |||||| Sbjct: 517 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatccctcccgaccag 576 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 577 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 636 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 637 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 683
>dbj|AB089619.1| Pan troglodytes UbB gene for polyubiquitin B, complete cds Length = 690 Score = 319 bits (161), Expect = 8e-84 Identities = 370/438 (84%), Gaps = 2/438 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| || | Sbjct: 1 atgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagt 60 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| ||||| |||||||| || |||||| Sbjct: 61 gacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcatccctcccgaccag 120 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || ||||| || ||| ||||||||||| Sbjct: 121 cagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaac 180 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| || ||||| || || || || |||||||||||||||||| Sbjct: 181 atccagaaggagtcgaccctgcatctggtcctgcgtctgagaggtggtatgcagatcttc 240 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || |||||||||||||||||||| | ||| | ||||||||||| Sbjct: 241 gtgaagaccctgactggcaagaccatcaccctggaagtggagcccagtgacaccatcgaa 300 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||| || || ||||| || || ||||||||| || ||||| Sbjct: 301 aatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagagg-ctcat 359 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||||| Sbjct: 360 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaagg 418 Query: 661 ggtcacccctgcccctgg 678 ||| |||||| ||||| Sbjct: 419 agtcgaccctgcacctgg 436 Score = 303 bits (153), Expect = 5e-79 Identities = 353/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| || ||||||||||||||||| || || ||| || | Sbjct: 229 atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaagtggagcccagt 288 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| ||||||||||| || || |||||||| || |||||| Sbjct: 289 gacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccag 348 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 349 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 408 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| |||||||| || || || || |||||||||||||||||| Sbjct: 409 atccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttc 468 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 469 gtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaa 528 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| |||||||| || || || ||||| || || ||||||||| || ||||| Sbjct: 529 aatgtgaaggccaagatccaagataaagaaggcatccctcccgaccagcagagg-ctcat 587 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||||||| || ||| ||| ||||||||||||||| Sbjct: 588 ctttg-caggcaagcagctggaagatggccgcactctttctgactacaacatccagaa 644 Score = 188 bits (95), Expect = 2e-44 Identities = 194/227 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| || | Sbjct: 457 atgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagt 516 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || || ||||| |||||||| || || || |||||||| || |||||| Sbjct: 517 gacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatccctcccgaccag 576 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| ||||||||||| || || |||||||| ||| ||||||||||| Sbjct: 577 cagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaac 636 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 637 atccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtgg 683
>gb|DQ216250.1| Taeniopygia guttata clone 0058P0027F01 ubiquitin C variant 9-like mRNA, complete sequence Length = 1074 Score = 317 bits (160), Expect = 3e-83 Identities = 357/421 (84%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| |||||||||||||||| | | || |||||| || Sbjct: 296 gatgcagatcttcgtgaagaccctgaccggcaagaccatcatcttggaagttgagcccag 355 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || || ||||| |||||||||||||||||||||||||| || ||||| Sbjct: 356 tgacaccattgaaaatgtgaaggccaagatccaggacaaggagggcatccctcctgacca 415 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || ||||||||||| |||||||| || || || |||||||| | |||||||| Sbjct: 416 gcagaggctgatctttgctggtaagcagctggaagatgggcgcaccctctccgactacaa 475 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| || |||||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct: 476 catccagaaagaatccaccctgcacctggtgctgcgcctcaggggtgggatgcagatctt 535 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||| |||||||| || |||||||||||||||||||| | |||| | ||||||||||| Sbjct: 536 cgtcaagaccctgactggcaagaccatcaccctggaagttgagcccagcgacaccatcga 595 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||| ||||| ||||||||||| ||||||||| || || | Sbjct: 596 gaatgtcaaggccaagatccaggataaggaaggcattcccccagaccagcagagg-ctga 654 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | ||| | ||||||||||| || ||||| || ||||| | | |||||||||||||||| Sbjct: 655 t-tttcgctggcaagcagctggaagatgggcgcaccctctccgactacaacatccagaag 713 Query: 660 g 660 | Sbjct: 714 g 714 Score = 295 bits (149), Expect = 1e-76 Identities = 352/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||||||||| ||| || | Sbjct: 69 atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggtggagcccagt 128 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 129 gacaccattgaaaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| || |||||||| || || ||||||||||| | ||||||||| Sbjct: 189 cagaggctgatctttgccggtaagcagctggaagatggccgcaccctgtccgactacaac 248 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 || ||||||||||| || || ||||||||||| ||||| || ||||| |||||||||||| Sbjct: 249 attcagaaggagtcaactctgcacctggtgctgcgcctgagaggtgggatgcagatcttc 308 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| |||||||||||||||| | |||| | |||| | |||||||| || Sbjct: 309 gtgaagaccctgaccggcaagaccatcatcttggaagttgagcccagtgacaccattgaa 368 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||||||||| || || ||||||||| || || || Sbjct: 369 aatgtgaaggccaagatccaggacaaggagggcatccctcctgaccagcagagg-ctgat 427 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | || |||||||| || ||||| || ||||| | | ||||||||||||||| Sbjct: 428 ctttg-ctggtaagcagctggaagatgggcgcaccctctccgactacaacatccagaa 484 Score = 190 bits (96), Expect = 5e-45 Identities = 195/228 (85%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| || |||||||| || ||||||||||||||||| || |||||| || Sbjct: 524 gatgcagatcttcgtcaagaccctgactggcaagaccatcaccctggaagttgagcccag 583 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||| ||||| || |||||||| ||||||||||| ||||| ||||| ||||| ||||| Sbjct: 584 cgacaccatcgagaatgtcaaggccaagatccaggataaggaaggcattcccccagacca 643 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || || || |||||||||||||| || || || |||||||| | |||||||| Sbjct: 644 gcagaggctgattttcgctggcaagcagctggaagatgggcgcaccctctccgactacaa 703 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 704 catccagaaggaatccaccctgcacctggtgctgcgcctcaggggtgg 751 Score = 125 bits (63), Expect = 3e-25 Identities = 177/214 (82%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||||||||| ||||||||||| || ||||||||||||||||| |||| ||| | Sbjct: 69 atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggtggagcccagt 128 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 |||||||| || || || ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129 gacaccattgaaaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||| || || || |||| | || |||||||| || |||||||| ||||| | | ||||| Sbjct: 189 cagagg-ctgatctttgcc-ggtaagcagctggaagatggccgcaccctgtccgactaca 246 Query: 649 acatccagaaggggtcacccctgcccctggngct 682 |||| ||||||| |||| | |||| ||||| ||| Sbjct: 247 acattcagaaggagtcaactctgcacctggtgct 280
>gb|DQ216241.1| Taeniopygia guttata clone 0058P0057E02 ubiquitin C variant 2-like mRNA, complete sequence Length = 1373 Score = 317 bits (160), Expect = 3e-83 Identities = 304/352 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || |||||||||||||| || ||||| ||| || Sbjct: 752 gatgcagatctttgtgaagaccctgactggcaagaccatcactctcgaggtggagcccag 811 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| |||||||||||||||||||||||||| || ||||| Sbjct: 812 tgacaccatcgagaatgtcaaggccaagatccaggacaaggagggcatccctcctgacca 871 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||||||||||||||| || || || |||||||| | |||||||| Sbjct: 872 gcagaggctgatctttgctggcaagcagctggaagatgggcgcaccctctccgactacaa 931 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||| || || |||||||||||||| ||||||||||| Sbjct: 932 catccagaaggaatccaccctgcaccttgtcctgcgcctcaggggtgggatgcagatctt 991 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||| ||||||||| || |||| ||| | ||||||||||| Sbjct: 992 tgtgaagaccctgactggcaggaccatcactctcgaggtggagcccagtgacaccatcga 1051 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || |||||||| ||||||||||||||||| ||||||||||| ||||||||| Sbjct: 1052 gaatgtcaaggccaagatccaggacaaggaaggcattcccccagaccagcag 1103 Score = 301 bits (152), Expect = 2e-78 Identities = 355/421 (84%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| || |||||||| |||||||||||||||||||| || |||||| || Sbjct: 524 gatgcagatcttcgtcaagaccctgaccggcaagaccatcaccctggaagttgagcccag 583 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||| ||||| || ||||| || ||||| Sbjct: 584 tgacaccattgagaatgtcaaggccaagatccaggataaggaaggtatccctcctgacca 643 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||||||||||||||| || || || |||||||| |||||||||| Sbjct: 644 gcagaggctgatctttgctggcaagcagctggaagatgggcgcaccctgtctgactacaa 703 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||| || || ||||| || || |||||||||||||| ||||||||||| Sbjct: 704 catccagaaggagtcaactctgcaccttgtcctgcgcctcaggggtgggatgcagatctt 763 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||| || |||| ||| | ||||||||||| Sbjct: 764 tgtgaagaccctgactggcaagaccatcactctcgaggtggagcccagtgacaccatcga 823 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| || || ||||||||| || || | Sbjct: 824 gaatgtcaaggccaagatccaggacaaggagggcatccctcctgaccagcagagg-ctga 882 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || ||||| || ||||| | | |||||||||||||||| Sbjct: 883 tctttg-ctggcaagcagctggaagatgggcgcaccctctccgactacaacatccagaag 941 Query: 660 g 660 | Sbjct: 942 g 942 Score = 299 bits (151), Expect = 8e-78 Identities = 354/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| || | Sbjct: 69 atgcagatctttgtgaagaccctgaccggcaagaccatcacccttgaggtggagcccagt 128 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 129 gacaccattgaaaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||| |||||||| || || ||||||||||| ||||||||||| Sbjct: 189 cagaggctgatctttgctggtaagcagctggaagatggccgcaccctctctgactacaac 248 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| || || ||||||||||| ||||| || ||||| |||||||| ||| Sbjct: 249 atccagaaagagtcaactctgcacctggtgctgcgcctgagaggtgggatgcagattttc 308 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||| ||||| ||||||||||||||||| || |||| ||| | |||||||| || Sbjct: 309 gtgaaaaccctgaccggcaagaccatcactctcgaggtggagcccagtgacaccattgaa 368 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||| || || || || ||||||||| || || || Sbjct: 369 aatgtgaaggccaagatccaggacaaggaaggtatccctcctgaccagcagagg-ctgat 427 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || ||||| || ||||| | | ||||||||||||||||| Sbjct: 428 ctttg-ctggcaagcagctggaagatgggcgcaccctgtcagactacaacatccagaagg 486 Score = 287 bits (145), Expect = 3e-74 Identities = 357/426 (83%), Gaps = 2/426 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 ||||||||| || ||||| ||||| ||||||||||||||||| || ||||| ||| || Sbjct: 296 gatgcagattttcgtgaaaaccctgaccggcaagaccatcactctcgaggtggagcccag 355 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || || ||||| ||||||||||||||||| || ||||| || ||||| Sbjct: 356 tgacaccattgaaaatgtgaaggccaagatccaggacaaggaaggtatccctcctgacca 415 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||||||||||||||| || || || |||||||| | |||||||| Sbjct: 416 gcagaggctgatctttgctggcaagcagctggaagatgggcgcaccctgtcagactacaa 475 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 476 catccagaaggaatccaccctgcacctggtgctgcgcctgagaggtgggatgcagatctt 535 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||| |||||||| ||||||||||||||||||||||| | |||| | |||||||| || Sbjct: 536 cgtcaagaccctgaccggcaagaccatcaccctggaagttgagcccagtgacaccattga 595 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||| ||||| || || || || ||||||||| || || | Sbjct: 596 gaatgtcaaggccaagatccaggataaggaaggtatccctcctgaccagcagagg-ctga 654 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 655 tctttg-ctggcaagcagctggaagatgggcgcaccctgtctgactacaacatccagaag 713 Query: 660 gggtca 665 | |||| Sbjct: 714 gagtca 719 Score = 180 bits (91), Expect = 5e-42 Identities = 194/228 (85%), Gaps = 4/228 (1%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || |||| ||||||||| || ||||| ||| || Sbjct: 980 gatgcagatctttgtgaagaccctgactggcaggaccatcactctcgaggtggagcccag 1039 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||| ||||| ||||| ||||| Sbjct: 1040 tgacaccatcgagaatgtcaaggccaagatccaggacaaggaaggcattcccccagacca 1099 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||||| |||||| ||||| || |||||||| | |||||||| Sbjct: 1100 gcagaggctgatctttgctg----gcagctggaggatgggcgcaccctctccgactacaa 1155 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||||||| |||||||| ||||| || || |||||||||||||| Sbjct: 1156 catccagaaggaatccaccctgcaccttgtcctgcgcctcaggggtgg 1203 Score = 139 bits (70), Expect = 2e-29 Identities = 179/214 (83%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||||||||| ||||||||||| |||||||||||||||||||| |||| ||| | Sbjct: 69 atgcagatctttgtgaagaccctgaccggcaagaccatcacccttgaggtggagcccagt 128 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 |||||||| || || || ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129 gacaccattgaaaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||| || || || |||| | || |||||||| || |||||||| ||||| ||| ||||| Sbjct: 189 cagagg-ctgatctttg-ctggtaagcagctggaagatggccgcaccctctctgactaca 246 Query: 649 acatccagaaggggtcacccctgcccctggngct 682 |||||||||| | |||| | |||| ||||| ||| Sbjct: 247 acatccagaaagagtcaactctgcacctggtgct 280
>gb|DQ216239.1| Taeniopygia guttata clone 0058P0040D01 ubiquitin C variant 2-like mRNA, complete sequence Length = 1376 Score = 317 bits (160), Expect = 3e-83 Identities = 304/352 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || |||||||||||||| || ||||| ||| || Sbjct: 752 gatgcagatctttgtgaagaccctgactggcaagaccatcactctcgaggtggagcccag 811 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| |||||||||||||||||||||||||| || ||||| Sbjct: 812 tgacaccatcgagaatgtcaaggccaagatccaggacaaggagggcatccctcctgacca 871 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||||||||||||||| || || || |||||||| | |||||||| Sbjct: 872 gcagaggctgatctttgctggcaagcagctggaagatgggcgcaccctctccgactacaa 931 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||| || || |||||||||||||| ||||||||||| Sbjct: 932 catccagaaggaatccaccctgcaccttgtcctgcgcctcaggggtgggatgcagatctt 991 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||| ||||||||| || |||| ||| | ||||||||||| Sbjct: 992 tgtgaagaccctgactggcaggaccatcactctcgaggtggagcccagtgacaccatcga 1051 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || |||||||| ||||||||||||||||| ||||||||||| ||||||||| Sbjct: 1052 gaatgtcaaggccaagatccaggacaaggaaggcattcccccagaccagcag 1103 Score = 301 bits (152), Expect = 2e-78 Identities = 355/421 (84%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| || |||||||| |||||||||||||||||||| || |||||| || Sbjct: 524 gatgcagatcttcgtcaagaccctgaccggcaagaccatcaccctggaagttgagcccag 583 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| ||||||||||| ||||| || ||||| || ||||| Sbjct: 584 tgacaccattgagaatgtcaaggccaagatccaggataaggaaggtatccctcctgacca 643 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||||||||||||||| || || || |||||||| |||||||||| Sbjct: 644 gcagaggctgatctttgctggcaagcagctggaagatgggcgcaccctgtctgactacaa 703 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||| || || ||||| || || |||||||||||||| ||||||||||| Sbjct: 704 catccagaaggagtcaactctgcaccttgtcctgcgcctcaggggtgggatgcagatctt 763 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||| || |||| ||| | ||||||||||| Sbjct: 764 tgtgaagaccctgactggcaagaccatcactctcgaggtggagcccagtgacaccatcga 823 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||||||||||||||| || || ||||||||| || || | Sbjct: 824 gaatgtcaaggccaagatccaggacaaggagggcatccctcctgaccagcagagg-ctga 882 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || ||||| || ||||| | | |||||||||||||||| Sbjct: 883 tctttg-ctggcaagcagctggaagatgggcgcaccctctccgactacaacatccagaag 941 Query: 660 g 660 | Sbjct: 942 g 942 Score = 299 bits (151), Expect = 8e-78 Identities = 354/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| || | Sbjct: 69 atgcagatctttgtgaagaccctgaccggcaagaccatcacccttgaggtggagcccagt 128 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 129 gacaccattgaaaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||| |||||||| || || ||||||||||| ||||||||||| Sbjct: 189 cagaggctgatctttgctggtaagcagctggaagatggccgcaccctctctgactacaac 248 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| || || ||||||||||| ||||| || ||||| |||||||| ||| Sbjct: 249 atccagaaagagtcaactctgcacctggtgctgcgcctgagaggtgggatgcagattttc 308 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||| ||||| ||||||||||||||||| || |||| ||| | |||||||| || Sbjct: 309 gtgaaaaccctgaccggcaagaccatcactctcgaggtggagcccagtgacaccattgaa 368 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||| || || || || ||||||||| || || || Sbjct: 369 aatgtgaaggccaagatccaggacaaggaaggtatccctcctgaccagcagagg-ctgat 427 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || ||||| || ||||| | | ||||||||||||||||| Sbjct: 428 ctttg-ctggcaagcagctggaagatgggcgcaccctgtcagactacaacatccagaagg 486 Score = 287 bits (145), Expect = 3e-74 Identities = 357/426 (83%), Gaps = 2/426 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 ||||||||| || ||||| ||||| ||||||||||||||||| || ||||| ||| || Sbjct: 296 gatgcagattttcgtgaaaaccctgaccggcaagaccatcactctcgaggtggagcccag 355 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || || ||||| ||||||||||||||||| || ||||| || ||||| Sbjct: 356 tgacaccattgaaaatgtgaaggccaagatccaggacaaggaaggtatccctcctgacca 415 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||||||||||||||| || || || |||||||| | |||||||| Sbjct: 416 gcagaggctgatctttgctggcaagcagctggaagatgggcgcaccctgtcagactacaa 475 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 476 catccagaaggaatccaccctgcacctggtgctgcgcctgagaggtgggatgcagatctt 535 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||| |||||||| ||||||||||||||||||||||| | |||| | |||||||| || Sbjct: 536 cgtcaagaccctgaccggcaagaccatcaccctggaagttgagcccagtgacaccattga 595 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| ||||||||||| ||||| || || || || ||||||||| || || | Sbjct: 596 gaatgtcaaggccaagatccaggataaggaaggtatccctcctgaccagcagagg-ctga 654 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || ||||| || ||||| ||| |||||||||||||||| Sbjct: 655 tctttg-ctggcaagcagctggaagatgggcgcaccctgtctgactacaacatccagaag 713 Query: 660 gggtca 665 | |||| Sbjct: 714 gagtca 719 Score = 180 bits (91), Expect = 5e-42 Identities = 194/228 (85%), Gaps = 4/228 (1%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || |||| ||||||||| || ||||| ||| || Sbjct: 980 gatgcagatctttgtgaagaccctgactggcaggaccatcactctcgaggtggagcccag 1039 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| ||||||||||||||||| ||||| ||||| ||||| Sbjct: 1040 tgacaccatcgagaatgtcaaggccaagatccaggacaaggaaggcattcccccagacca 1099 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||||| |||||| ||||| || |||||||| | |||||||| Sbjct: 1100 gcagaggctgatctttgctg----gcagctggaggatgggcgcaccctctccgactacaa 1155 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||||||| |||||||| ||||| || || |||||||||||||| Sbjct: 1156 catccagaaggaatccaccctgcaccttgtcctgcgcctcaggggtgg 1203 Score = 139 bits (70), Expect = 2e-29 Identities = 179/214 (83%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||||||||| ||||||||||| |||||||||||||||||||| |||| ||| | Sbjct: 69 atgcagatctttgtgaagaccctgaccggcaagaccatcacccttgaggtggagcccagt 128 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 |||||||| || || || ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129 gacaccattgaaaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||| || || || |||| | || |||||||| || |||||||| ||||| ||| ||||| Sbjct: 189 cagagg-ctgatctttg-ctggtaagcagctggaagatggccgcaccctctctgactaca 246 Query: 649 acatccagaaggggtcacccctgcccctggngct 682 |||||||||| | |||| | |||| ||||| ||| Sbjct: 247 acatccagaaagagtcaactctgcacctggtgct 280
>gb|AC158180.2| Selaginella moellendorffii chromosome JGIASXY-5A14, complete sequence Length = 36906 Score = 317 bits (160), Expect = 3e-83 Identities = 345/405 (85%), Gaps = 2/405 (0%) Strand = Plus / Plus Query: 256 aagaccctcaccggcaagaccatcacccttgaggttgagtcctctgacacgatcgacaac 315 ||||||||||| || ||||| |||||| | ||||| ||| ||| ||||||||||||||| Sbjct: 5103 aagaccctcacagggaagacgatcaccttggaggtggagagctcggacacgatcgacaac 5162 Query: 316 gtcaaggcgaagatccaggacaaggagggcatccccccggaccagcagcgcctcatcttt 375 || ||| | ||||||||||||||||| ||||||||||||||||||||||| | ||||| Sbjct: 5163 gtgaagaccaagatccaggacaaggaaggcatccccccggaccagcagcgattgatcttc 5222 Query: 376 gctggcaagcagcttgaggacggccgcacccttgctgactacaacatccagaaggagtcc 435 || |||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 5223 gcaggcaagcagcttgaggacggccgcactcttgcggactacaacatccaaaaggagtct 5282 Query: 436 accctccacctggtgctccgcctcaggggtggtatgcagatcttcgtgaagaccctcacc 495 || || |||||||| | || ||| | ||||| ||||| |||||||||||||| ||||| Sbjct: 5283 acgcttcacctggttttgcgtctccgtggtggcatgcaaatcttcgtgaagactctcact 5342 Query: 496 ggcaagaccatcaccctggagggtgagtcttcggacaccatcgacaacgtcaaggcgaag 555 |||||||| |||||| |||||| ||| || ||||| || |||||||| ||| | ||| Sbjct: 5343 ggcaagacgatcaccttggaggtagagagctccgacacgattgacaacgttaagaccaag 5402 Query: 556 atccaggacaaggagggcattcccccggaccagcagcggcctcatntttgncgggcaagc 615 ||||||||||||||||||||||| |||||||||||| || ||||| || | | ||||||| Sbjct: 5403 atccaggacaaggagggcattccaccggaccagcagagg-ctcatcttcg-ctggcaagc 5460 Query: 616 agcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| || |||||||| || ||||||| |||||||||||||||| Sbjct: 5461 agctcgaggatggccggactcttgctgattacaacatccagaagg 5505 Score = 248 bits (125), Expect = 3e-62 Identities = 348/421 (82%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 ||||||||||||||||||||| |||||||||||||| ||||| || ||||| ||| ||| Sbjct: 4175 gatgcagatctttgtgaagactctcaccggcaagacgatcacgctcgaggtcgagagctc 4234 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 ||||||||||| || || ||| ||||||||||||| |||||||| || || |||||||| Sbjct: 4235 cgacacgatcgataatgttaagtcgaagatccaggataaggagggaattcctccggacca 4294 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||||| | |||||||| ||||||||||| ||||| || ||||| || || || ||||| Sbjct: 4295 gcagcgattgatctttgccggcaagcagctcgaggaggggcgcacgctcgcggattacaa 4354 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||| ||| | || |||||||| ||||| | || |||||||| || || Sbjct: 4355 catccagaaggagtcgaccttgcatctggtgctgcgccttcgaggaggtatgcaaatttt 4414 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||| |||||||| || || ||||| || || || |||| ||| || ||||| ||||| Sbjct: 4415 cgtcaagaccctaacggggaagacgattacgctcgaggtggagagctccgacacgatcga 4474 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 |||||| ||| | ||||||||||||||||| ||||| || ||||||||||||| | | | Sbjct: 4475 caacgttaagaccaagatccaggacaaggaaggcatccctccggaccagcagc-gattga 4533 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| || ||||| | |||||||||||| ||| Sbjct: 4534 tctttgcc-ggcaagcagctagaagatggccggactcttgccgactacaacatccaaaag 4592 Query: 660 g 660 | Sbjct: 4593 g 4593 Score = 228 bits (115), Expect = 2e-56 Identities = 345/420 (82%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| ||||| || |||||| | || || ||||| ||||| || ||||| ||| ||| Sbjct: 4860 atgcaaatcttcgtcaagaccttgacggggaagacgatcacgctcgaggtggagagctcc 4919 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || |||||||| ||| | ||||||||||||||||| || ||||||||||||||| Sbjct: 4920 gacacaattgacaacgtgaagaccaagatccaggacaaggaaggtatccccccggaccag 4979 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| | |||||||| ||||||||||| || || ||||| || || || ||||||||| Sbjct: 4980 cagcgtttgatctttgcgggcaagcagctagaagatggccggactctggccgactacaac 5039 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| || ||||| |||| || ||||| | || |||||||| || ||| Sbjct: 5040 atccagaaggagtcgacgctccatttggtccttcgccttcgtggaggtatgcaaattttc 5099 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| || ||||| |||||| |||||| ||| |||||||| |||||| Sbjct: 5100 gtcaagaccctcacagggaagacgatcaccttggaggtggagagctcggacacgatcgac 5159 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||| | ||||||||||||||||| ||||| |||||||||||||||| | | || Sbjct: 5160 aacgtgaagaccaagatccaggacaaggaaggcatccccccggaccagcagc-gattgat 5218 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | |||||||||||||| || ||||| || ||||| | |||||||||||| |||| Sbjct: 5219 cttcg-caggcaagcagcttgaggacggccgcactcttgcggactacaacatccaaaagg 5277 Score = 206 bits (104), Expect = 9e-50 Identities = 331/405 (81%), Gaps = 2/405 (0%) Strand = Plus / Plus Query: 256 aagaccctcaccggcaagaccatcacccttgaggttgagtcctctgacacgatcgacaac 315 |||||||| || || ||||| || || || ||||| ||| ||| ||||||||||||||| Sbjct: 4419 aagaccctaacggggaagacgattacgctcgaggtggagagctccgacacgatcgacaac 4478 Query: 316 gtcaaggcgaagatccaggacaaggagggcatccccccggaccagcagcgcctcatcttt 375 || ||| | ||||||||||||||||| |||||||| |||||||||||||| | |||||| Sbjct: 4479 gttaagaccaagatccaggacaaggaaggcatccctccggaccagcagcgattgatcttt 4538 Query: 376 gctggcaagcagcttgaggacggccgcacccttgctgactacaacatccagaaggagtcc 435 || ||||||||||| || || ||||| || ||||| |||||||||||||| ||||| || Sbjct: 4539 gccggcaagcagctagaagatggccggactcttgccgactacaacatccaaaaggaatct 4598 Query: 436 accctccacctggtgctccgcctcaggggtggtatgcagatcttcgtgaagaccctcacc 495 || ||||| |||| || || || | || |||||||| |||||||| |||||| | || Sbjct: 4599 acgctccatttggtccttcgtcttcgcgggggtatgcaaatcttcgtcaagaccttgacg 4658 Query: 496 ggcaagaccatcaccctggagggtgagtcttcggacaccatcgacaacgtcaaggcgaag 555 || ||||| ||||| || |||| ||| || ||||| || |||||||| ||| | ||| Sbjct: 4659 gggaagacgatcacgctcgaggtggagagctccgacacaattgacaacgtgaagaccaag 4718 Query: 556 atccaggacaaggagggcattcccccggaccagcagcggcctcatntttgncgggcaagc 615 |||||||||||||| |||||||| ||||||||||||| | | || |||| ||||||||| Sbjct: 4719 atccaggacaaggaaggcattcctccggaccagcagc-gtttgatctttg-cgggcaagc 4776 Query: 616 agcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| || |||||||| || || || | ||||||||||||||||| Sbjct: 4777 agctagaagatggccggactctggccgactacaacatccagaagg 4821 Score = 188 bits (95), Expect = 2e-44 Identities = 176/203 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| ||||| |||||||| ||||| |||||||| |||||| | ||||| ||| ||| Sbjct: 5316 atgcaaatcttcgtgaagactctcactggcaagacgatcaccttggaggtagagagctcc 5375 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||| |||||||| ||| | ||||||||||||||||||||||| || ||||||||| Sbjct: 5376 gacacgattgacaacgttaagaccaagatccaggacaaggagggcattccaccggaccag 5435 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | |||||||| |||||||||||||| ||||| ||||| || |||||||| |||||| Sbjct: 5436 cagaggctcatcttcgctggcaagcagctcgaggatggccggactcttgctgattacaac 5495 Query: 421 atccagaaggagtccaccctcca 443 |||||||||||||| || ||||| Sbjct: 5496 atccagaaggagtcgacgctcca 5518 Score = 188 bits (95), Expect = 2e-44 Identities = 340/420 (80%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| ||||| || |||||| | || || ||||| ||||| || ||||| ||| ||| Sbjct: 4632 atgcaaatcttcgtcaagaccttgacggggaagacgatcacgctcgaggtggagagctcc 4691 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || |||||||| ||| | ||||||||||||||||| ||||| || ||||||||| Sbjct: 4692 gacacaattgacaacgtgaagaccaagatccaggacaaggaaggcattcctccggaccag 4751 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| | |||||||| ||||||||||| || || ||||| || || || ||||||||| Sbjct: 4752 cagcgtttgatctttgcgggcaagcagctagaagatggccggactctggccgactacaac 4811 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||| ||||| ||||| |||| || || || | || |||||||| |||||| Sbjct: 4812 atccagaaggaatccacgctccatttggtccttcgtcttcgcgggggtatgcaaatcttc 4871 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||| | || || ||||| ||||| || |||| ||| || ||||| || ||| Sbjct: 4872 gtcaagaccttgacggggaagacgatcacgctcgaggtggagagctccgacacaattgac 4931 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||| | ||||||||||||||||| || || |||||||||||||||| | | || Sbjct: 4932 aacgtgaagaccaagatccaggacaaggaaggtatccccccggaccagcagc-gtttgat 4990 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| ||||||||||||| || |||||||| || || || | ||||||||||||||||| Sbjct: 4991 ctttg-cgggcaagcagctagaagatggccggactctggccgactacaacatccagaagg 5049
>emb|CR734033.2|CNS0GT5S Tetraodon nigroviridis full-length cDNA Length = 755 Score = 315 bits (159), Expect = 1e-82 Identities = 356/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 304 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 363 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 364 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 423 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 424 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 483 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 484 atccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 543 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 544 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 603 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 604 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 662 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| |||||||| ||||| | | ||||||||||||||||| Sbjct: 663 ctttg-ctggcaagcagcttgaagatggccgcaccctgtccgactacaacatccagaagg 721 Score = 307 bits (155), Expect = 3e-80 Identities = 355/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 76 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 135 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 136 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 195 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 196 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 255 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || | ||||| || |||||||||||| Sbjct: 256 atccagaaggagtccaccctccaccttgtcctgcgtttgaggggaggcatgcagatcttc 315 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 316 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 375 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 376 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 434 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| |||||||| ||||| | | ||||||||||||||||| Sbjct: 435 ctttg-ctggcaagcagcttgaagatggccgcaccctgtccgactacaacatccagaagg 493 Score = 194 bits (98), Expect = 3e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 532 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 591 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 592 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 651 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 652 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 711 Query: 421 atccagaaggagtccaccctccacct 446 |||||||||||||||||||||||||| Sbjct: 712 atccagaaggagtccaccctccacct 737
>emb|CR733056.2|CNS0GSJ4 Tetraodon nigroviridis full-length cDNA Length = 751 Score = 315 bits (159), Expect = 1e-82 Identities = 356/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 72 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 131 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 132 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 191 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 192 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 251 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 252 atccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 311 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 312 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 371 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 372 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 430 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| |||||||| ||||| | | ||||||||||||||||| Sbjct: 431 ctttg-ctggcaagcagcttgaagatggccgcaccctgtccgactacaacatccagaagg 489 Score = 276 bits (139), Expect = 1e-70 Identities = 351/420 (83%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 300 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 359 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 360 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 419 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 420 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 479 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| | || || || ||||| || |||||||||||| Sbjct: 480 atccagaaggagtccaccctccaccttttcctgcgtctgaggggaggcatgcagatcttc 539 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| || ||||| ||||||||||| |||| ||| | ||||||| || Sbjct: 540 gtcaagacccttactggcaaaaccatcaccctcgaggtggagcccagcaacaccattgag 599 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| | |||||| || || || Sbjct: 600 aacgtgaaggccaagatccaggacaaggaaggcattccccctgttcagcagagg-ctgat 658 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 659 ttttg-ctggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaagg 717 Score = 147 bits (74), Expect = 7e-32 Identities = 170/202 (84%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||| || ||||| ||||||||||| ||||| ||| || Sbjct: 528 atgcagatcttcgtcaagacccttactggcaaaaccatcaccctcgaggtggagcccagc 587 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| | ||| Sbjct: 588 aacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgttcag 647 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || || ||||||||||||||||| || || ||||||||||| | ||||||||| Sbjct: 648 cagaggctgatttttgctggcaagcagctggaagatggccgcaccctgtccgactacaac 707 Query: 421 atccagaaggagtccaccctcc 442 |||||||||||||||||||||| Sbjct: 708 atccagaaggagtccaccctcc 729
>emb|CR732470.2|CNS0GS4B Tetraodon nigroviridis full-length cDNA Length = 883 Score = 315 bits (159), Expect = 1e-82 Identities = 356/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 72 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 131 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 132 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 191 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 192 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 251 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 252 atccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 311 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 312 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 371 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 372 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 430 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| |||||||| ||||| | | ||||||||||||||||| Sbjct: 431 ctttg-ctggcaagcagcttgaagatggccgcaccctgtccgactacaacatccagaagg 489 Score = 276 bits (139), Expect = 1e-70 Identities = 328/389 (84%), Gaps = 2/389 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 300 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 359 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 360 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 419 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 420 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 479 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 480 atccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 539 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| || ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 540 gtcaagacccttactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 599 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| ||| | || Sbjct: 600 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagaggc-tgat 658 Query: 601 ntttgncgggcaagcagcttgangatggc 629 |||| | ||||||||||| || |||||| Sbjct: 659 ctttg-ctggcaagcagctggaagatggc 686 Score = 145 bits (73), Expect = 3e-31 Identities = 178/209 (85%), Gaps = 3/209 (1%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||| || ||||| ||||||||||| ||||| ||| || Sbjct: 528 atgcagatcttcgtcaagacccttactggcaaaaccatcaccctcgaggtggagcccagc 587 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 588 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 647 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggc-cgcacccttg-ctgactaca 418 ||| | || |||||||||||||||||||| || || ||| ||||||| || | ||||||| Sbjct: 648 cagaggctgatctttgctggcaagcagctggaagatggcgcgcacccctgtccgactaca 707 Query: 419 acatc-cagaaggagtccaccctccacct 446 ||||| ||||||||||||||||||||||| Sbjct: 708 acatcgcagaaggagtccaccctccacct 736
>emb|CR731853.1|CNS0GRN6 Tetraodon nigroviridis full-length cDNA Length = 877 Score = 315 bits (159), Expect = 1e-82 Identities = 356/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 299 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 358 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 359 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 418 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 419 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 478 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 479 atccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 538 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||||||||||||||| |||| ||| | |||||||| || Sbjct: 539 gtcaagaccctcactggcaagaccatcaccctcgaggtggagcccagcgacaccattgag 598 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 599 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 657 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 658 ctttg-ctggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaagg 716 Score = 299 bits (151), Expect = 8e-78 Identities = 354/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 71 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 130 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 131 gacatcattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 190 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||| |||||||||||||| || ||||||||||| | ||||||||| Sbjct: 191 cagaggctgatctttgccggcaagcagcttgaagatggccgcaccctgtccgactacaac 250 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 251 atccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 310 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 311 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 370 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 371 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 429 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| |||||||| ||||| | | ||||||||||||||||| Sbjct: 430 ctttg-ctggcaagcagcttgaagatggccgcaccctgtccgactacaacatccagaagg 488 Score = 194 bits (98), Expect = 3e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||||||||||||||| ||||| ||| || Sbjct: 527 atgcagatcttcgtcaagaccctcactggcaagaccatcaccctcgaggtggagcccagc 586 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 587 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 646 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| || || ||||||||||| | ||||||||| Sbjct: 647 cagaggctgatctttgctggcaagcagctggaagatggccgcaccctgtccgactacaac 706 Query: 421 atccagaaggagtccaccctccacct 446 |||||||||||||||||||||||||| Sbjct: 707 atccagaaggagtccaccctccacct 732 Score = 44.1 bits (22), Expect = 0.73 Identities = 25/26 (96%) Strand = Plus / Plus Query: 721 accctcactggcaagaacatcaccct 746 |||||||||||||||| ||||||||| Sbjct: 545 accctcactggcaagaccatcaccct 570
>emb|CR726740.2|CNS0GNP6 Tetraodon nigroviridis full-length cDNA Length = 628 Score = 315 bits (159), Expect = 1e-82 Identities = 356/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 2 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 61 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 62 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 121 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 122 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctctccgactacaac 181 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 182 atccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 241 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 242 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 301 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 302 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 360 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| |||||||| ||||| | | ||||||||||||||||| Sbjct: 361 ctttg-ctggcaagcagcttgaagatggccgcaccctgtccgactacaacatccagaagg 419 Score = 254 bits (128), Expect = 4e-64 Identities = 284/336 (84%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 230 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 289 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 290 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 349 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 350 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 409 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || | ||||| || |||||||||||| Sbjct: 410 atccagaaggagtccaccctccaccttgtcctgcggttgaggggaggcatgcagatcttc 469 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| |||||||| || |||| ||| | |||||||| || Sbjct: 470 gtcaagaccctcactggcaaaaccatcactcttgaggtggagcccagcgacaccattgag 529 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcatt 576 ||||| ||||| ||||||||||||||||| |||||| Sbjct: 530 aacgtgaaggccaagatccaggacaaggaaggcatt 565
>emb|CR704306.2|CNS0G6E6 Tetraodon nigroviridis full-length cDNA Length = 681 Score = 315 bits (159), Expect = 1e-82 Identities = 356/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 230 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 289 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 290 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 349 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 350 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctctccgactacaac 409 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 410 atccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 469 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 470 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 529 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 530 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 588 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| |||||||| ||||| | | ||||||||||||||||| Sbjct: 589 ctttg-ctggcaagcagcttgaagatggccgcaccctgtccgactacaacatccagaagg 647 Score = 315 bits (159), Expect = 1e-82 Identities = 356/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 2 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 61 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 62 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 121 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 122 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 181 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 182 atccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 241 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 242 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 301 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 302 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 360 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| |||||||| ||||| | | ||||||||||||||||| Sbjct: 361 ctttg-ctggcaagcagcttgaagatggccgcaccctctccgactacaacatccagaagg 419 Score = 194 bits (98), Expect = 3e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 458 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 517 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 518 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 577 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 578 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 637 Query: 421 atccagaaggagtccaccctccacct 446 |||||||||||||||||||||||||| Sbjct: 638 atccagaaggagtccaccctccacct 663
>gb|AF517849.1| Griffithsia japonica isolate Gj532 polyubiquitin mRNA, partial cds Length = 681 Score = 315 bits (159), Expect = 1e-82 Identities = 356/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||||||||| |||||||||||||| ||||| ||||| || Sbjct: 128 atgcagatcttcgtcaagaccctcaccggaaagaccatcaccctcgaggtcgagtcgtcg 187 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || || || || |||||| | ||||| |||||||||||||| ||||| ||||||||| Sbjct: 188 gataccattgagaatgtcaagaccaagattcaggacaaggagggtatccctccggaccag 247 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||||||||| ||||| ||||| ||||||||||||||||| | ||||| ||| Sbjct: 248 cagcgtctcatctttgccggcaaacagctcgaggacggccgcaccctgtccgactataac 307 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| ||||| || ||||||||||| || | || || |||||||| ||| Sbjct: 308 atccagaaggagtcgacccttcatctggtgctccgtctgcgtggaggcatgcagattttc 367 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| |||||||||||||||||||| || |||| ||||| || ||||| || || Sbjct: 368 gtcaagacactcaccggcaagaccatcacgctcgaggtcgagtcgtctgacacgattgaa 427 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||| ||||||||||||| ||||||||||| || |||||||||||||| | |||| Sbjct: 428 aacgtcaagacgaagatccaggataaggagggcatccctccggaccagcagcgtc-tcat 486 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||||| || || ||||| ||||| | | ||||||||||||||||| Sbjct: 487 tttcg-ctggcaagcagctcgaagacggccgcaccctgtccgactacaacatccagaagg 545 Score = 244 bits (123), Expect = 4e-61 Identities = 195/219 (89%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| || || ||||| |||||||||||||||||||| || ||||| ||||| ||| Sbjct: 356 atgcagattttcgtcaagacactcaccggcaagaccatcacgctcgaggtcgagtcgtct 415 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 |||||||| || ||||||||| ||||||||||||| |||||||||||||| ||||||||| Sbjct: 416 gacacgattgaaaacgtcaagacgaagatccaggataaggagggcatccctccggaccag 475 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| ||||| || |||||||||||||| || |||||||||||||| | ||||||||| Sbjct: 476 cagcgtctcattttcgctggcaagcagctcgaagacggccgcaccctgtccgactacaac 535 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctc 459 |||||||||||||| || ||||| ||||||||||||||| Sbjct: 536 atccagaaggagtcgacgctccatctggtgctccgcctc 574
>emb|AJ844617.1| Plantago major mRNA for polyubiquitin (ubq3 gene) Length = 1319 Score = 315 bits (159), Expect = 1e-82 Identities = 303/351 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| |||||||||||||| || |||||||| || || ||||||||||||||| |||| Sbjct: 217 atgcaaatctttgtgaagactcttaccggcaaaactattacccttgaggttgagagctct 276 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| |||||||| ||||||||||| |||||||| || |||||||||||| Sbjct: 277 gacaccattgacaatgtcaaggccaagatccaggataaggagggtattcccccggaccag 336 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | | ||||||||||| |||||||||||||| || || ||||| |||||||||||| Sbjct: 337 cagaggttgatctttgctggaaagcagcttgaggatggtcgtaccctcgctgactacaac 396 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||||||||||||||| |||| ||||| ||| | ||||||||||| ||||| Sbjct: 397 atccagaaggagtccaccctccatttggtcctccgtctccgtggtggtatgcaaatcttt 456 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| || || |||||||| || ||||| |||| |||| || |||||||| ||| Sbjct: 457 gtgaagactctgactggcaagactattacccttgaggttgagagctctgacaccattgac 516 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 ||||||||||| ||||||||||||||||| ||||||||||| || |||||| Sbjct: 517 aacgtcaaggccaagatccaggacaaggaaggcattcccccagatcagcag 567 Score = 262 bits (132), Expect = 2e-66 Identities = 329/393 (83%), Gaps = 2/393 (0%) Strand = Plus / Plus Query: 268 ggcaagaccatcacccttgaggttgagtcctctgacacgatcgacaacgtcaaggcgaag 327 ||||||||||| ||||||||||| ||| || ||||| || ||||| || ||||| ||| Sbjct: 16 ggcaagaccattacccttgaggtggagagttccgacaccattgacaatgttaaggccaag 75 Query: 328 atccaggacaaggagggcatccccccggaccagcagcgcctcatctttgctggcaagcag 387 |||||||||||||||||||| ||||| ||||||||| | | |||||||| || |||||| Sbjct: 76 atccaggacaaggagggcattcccccagaccagcagaggttgatctttgccggaaagcag 135 Query: 388 cttgaggacggccgcacccttgctgactacaacatccagaaggagtccaccctccacctg 447 |||||||| || ||||| ||||| || |||||||| ||||| |||||||| ||||| || Sbjct: 136 cttgaggatggtcgcacgcttgccgattacaacattcagaaagagtccactctccatttg 195 Query: 448 gtgctccgcctcaggggtggtatgcagatcttcgtgaagaccctcaccggcaagaccatc 507 || ||||| ||| | ||||||||||| ||||| |||||||| || |||||||| || || Sbjct: 196 gtcctccgtctccgtggtggtatgcaaatctttgtgaagactcttaccggcaaaactatt 255 Query: 508 accctggagggtgagtcttcggacaccatcgacaacgtcaaggcgaagatccaggacaag 567 ||||| |||| |||| || |||||||| ||||| |||||||| ||||||||||| ||| Sbjct: 256 acccttgaggttgagagctctgacaccattgacaatgtcaaggccaagatccaggataag 315 Query: 568 gagggcattcccccggaccagcagcggcctcatntttgncgggcaagcagcttgangatg 627 ||||| |||||||||||||||||| || | || |||| | || ||||||||||| |||| Sbjct: 316 gagggtattcccccggaccagcagagg-ttgatctttg-ctggaaagcagcttgaggatg 373 Query: 628 gccgaacccttgctgnctacaacatccagaagg 660 | || ||||| |||| ||||||||||||||||| Sbjct: 374 gtcgtaccctcgctgactacaacatccagaagg 406 Score = 212 bits (107), Expect = 1e-51 Identities = 290/351 (82%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||| |||||||||||||| || || |||||||| || ||||||||||||||| |||| Sbjct: 445 atgcaaatctttgtgaagactctgactggcaagactattacccttgaggttgagagctct 504 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || |||||||||||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 505 gacaccattgacaacgtcaaggccaagatccaggacaaggaaggcattcccccagatcag 564 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | | ||||||||||| || || |||||||| || || ||||||||||| |||||| Sbjct: 565 cagaggttgatctttgctggtaaacaacttgaggatgggcgtacccttgctgattacaac 624 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 || |||||||| ||| ||||| ||||| | | | |||||||||||||||||||| Sbjct: 625 attcagaaggaaagcactctccatttggtgttgaggttgaggggtggtatgcagatcttt 684 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || || ||| | |||||||||||||||||| |||||| |||| || |||||||| || Sbjct: 685 gtcaaaaccttgaccggcaagaccatcaccttggaggttgagagctcagacaccattgat 744 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || || ||||| || |||||||||||||| || || || || ||||||||| Sbjct: 745 aatgtgaaggccaaaatccaggacaaggaaggtatcccaccagaccagcag 795 Score = 141 bits (71), Expect = 4e-30 Identities = 281/351 (80%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| || ||| | |||||||||||||||||| | ||||||||| ||| Sbjct: 673 atgcagatctttgtcaaaaccttgaccggcaagaccatcaccttggaggttgagagctca 732 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| || |||||||||||||| || ||||| || |||||| Sbjct: 733 gacaccattgataatgtgaaggccaaaatccaggacaaggaaggtatcccaccagaccag 792 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||| ||||| | ||||| || || || || ||||||||||| Sbjct: 793 cagagacttatctttgctggaaagcaattggaggatggtcgtactctggctgactacaat 852 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||| ||| || ||| ||||| | | || || || || ||||||||||| Sbjct: 853 atccagaaagagagcacacttcacttggtgttgaggcttagaggaggaatgcagatcttt 912 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| || || || |||||||| ||||||| ||| || || |||||||| Sbjct: 913 gttaagaccctgacaggtaaaaccatcactctggaggtagagagctctgataccatcgat 972 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || || ||||| ||||| ||||| |||||||| ||||| || ||||||||| Sbjct: 973 aatgtgaaggccaagattcaggataaggagggtattccaccagaccagcag 1023 Score = 111 bits (56), Expect = 4e-21 Identities = 185/228 (81%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| |||||||| || || || |||||||| || ||||| ||| |||| Sbjct: 901 atgcagatctttgttaagaccctgacaggtaaaaccatcactctggaggtagagagctct 960 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || ||||| || || ||||| ||||| ||||| |||||||| || || || |||||| Sbjct: 961 gataccatcgataatgtgaaggccaagattcaggataaggagggtattccaccagaccag 1020 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||| || ||||| || ||| | ||||| || | || ||||| |||||||| Sbjct: 1021 cagaggctcattttcgctggaaaacagttggaggatggaaggactcttgcagactacaat 1080 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggt 468 |||||||||||||| ||||||||||| || ||||| ||| | |||||| Sbjct: 1081 atccagaaggagtcaaccctccaccttgtcctccgtctccgtggtggt 1128
>gb|DQ473431.1| Anser anser breed Landoise polyubiquitin mRNA, complete cds Length = 1148 Score = 311 bits (157), Expect = 2e-81 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||||||||| ||| || Sbjct: 91 atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggtcgagcccagc 150 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || || || || || ||||| ||||||||||||||||| ||||| || || |||||| Sbjct: 151 gataccattgagaatgtgaaggccaagatccaggacaaggaaggcattcctcctgaccag 210 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| || ||||| |||||||| ||||||||||| Sbjct: 211 cagaggctgatctttgctggcaagcagctggaagacgggcgcaccctgtctgactacaac 270 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| || |||||||| ||||| ||||| ||||| || ||||| |||||||||||| Sbjct: 271 atccagaaagaatccaccctgcaccttgtgctgcgcctgagaggtggcatgcagatcttc 330 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| || || ||||||||||||||||| |||| |||| || |||||||| || Sbjct: 331 gtgaagactctgactggcaagaccatcacccttgaggttgagcctagtgacaccattgag 390 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||| |||||||| || ||||||||| || || || Sbjct: 391 aatgtgaaggccaagatccaggacaaggaaggcattcctcctgaccagcagagg-ctgat 449 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 450 ctttg-ctggcaagcagctggaagatgggcgcaccctgtctgactacaacatccagaa 506 Score = 287 bits (145), Expect = 3e-74 Identities = 351/418 (83%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||| || || ||||||||||||||||||||||||||| | | Sbjct: 319 atgcagatcttcgtgaagactctgactggcaagaccatcacccttgaggttgagcctagt 378 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| ||||||||||||||||| ||||| || || |||||| Sbjct: 379 gacaccattgagaatgtgaaggccaagatccaggacaaggaaggcattcctcctgaccag 438 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| || || || |||||||| ||||||||||| Sbjct: 439 cagaggctgatctttgctggcaagcagctggaagatgggcgcaccctgtctgactacaac 498 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| || |||||||| ||||| ||||| ||||| || ||||| |||||||||||| Sbjct: 499 atccagaaagaatccaccctgcaccttgtgctgcgcctgagaggtggcatgcagatcttc 558 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| || || ||||||||||||||||| |||| |||| || |||||||| || Sbjct: 559 gtgaagactctgactggcaagaccatcacccttgaggttgagcctagtgacaccattgag 618 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||| |||||||| || ||||||||| || | || Sbjct: 619 aatgtgaaggccaagatccaggacaaggaaggcattcctcctgaccagcagagg-ttgat 677 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 ||| | ||||||||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 678 -tttcgctggcaagcagctggaagatgggcgcaccctgtctgactacaacatccagaa 734 Score = 220 bits (111), Expect = 6e-54 Identities = 293/351 (83%), Gaps = 2/351 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||| || || ||||||||||||||||||||||||||| | | Sbjct: 547 atgcagatcttcgtgaagactctgactggcaagaccatcacccttgaggttgagcctagt 606 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| ||||||||||||||||| ||||| || || |||||| Sbjct: 607 gacaccattgagaatgtgaaggccaagatccaggacaaggaaggcattcctcctgaccag 666 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | | || || |||||||||||||| || || || |||||||| ||||||||||| Sbjct: 667 cagaggttgattttcgctggcaagcagctggaagatgggcgcaccctgtctgactacaac 726 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| || ||||||| ||||| ||||| ||||| || ||||| |||||||||||| Sbjct: 727 atccagaaagaatccaccccgcaccttgtgctgcgcctgagaggtggcatgcagatcttc 786 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| || || ||||||||||||||||| |||| |||| || |||||||| || Sbjct: 787 gtgaagactctgactggcaagaccatcacccttgaggttgagcctagtgacaccattgag 846 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || || ||||| |||||||||||||||| ||||||| || ||||||||| Sbjct: 847 aatgtgaaggc-cagatccaggacaagga-agcattcctcctgaccagcag 895
>emb|CR722677.2|CNS0GKKB Tetraodon nigroviridis full-length cDNA Length = 1023 Score = 311 bits (157), Expect = 2e-81 Identities = 354/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||||||||| ||||| |||||||| |||||||| ||| || | Sbjct: 344 atgcagatctttgtcaagaccctcactggcaaaaccatcactcttgaggtggagcccagt 403 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 404 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 463 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | |||||||| Sbjct: 464 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaat 523 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 524 atccagaaagagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 583 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 584 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 643 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 644 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 702 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | |||||||||||||| |||||||| ||||| | | ||||||||||||||| Sbjct: 703 ctttg-ctggcaagcagcttgaagatggccgcaccctgtccgactacaacatccagaa 759 Score = 258 bits (130), Expect = 3e-65 Identities = 347/418 (83%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 572 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 631 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 632 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 691 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 692 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 751 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||||||||| || || || | ||||| || |||||||| ||| Sbjct: 752 atccagaaagagtccaccctccaccttgtcctgcgtatgaggggaggcatgcagatattc 811 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| || | |||||||| || Sbjct: 812 gtcaagaccctcactggcaaaaccatcaccctcgaggtgaagcccagcgacaccattgag 871 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||| | |||||||||||||| || ||||||||||| || |||||| || || || Sbjct: 872 aatgtcaagaccaagatccaggacaaagaaggcattccccctgatcagcagagg-ctgat 930 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | ||||||||||| || |||| ||| ||||| ||| ||||||||||||||| Sbjct: 931 ctttg-ctggcaagcagctggaagatgnccgcaccctgtctgactacaacatccagaa 987 Score = 149 bits (75), Expect = 2e-32 Identities = 173/206 (83%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||| || || ||||||||||| ||||| ||||||||||| ||||| || || Sbjct: 800 atgcagatattcgtcaagaccctcactggcaaaaccatcaccctcgaggtgaagcccagc 859 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||| | |||||||||||||| || ||||| ||||| || ||| Sbjct: 860 gacaccattgagaatgtcaagaccaagatccaggacaaagaaggcattccccctgatcag 919 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| || || | ||||||||| ||||||||||| Sbjct: 920 cagaggctgatctttgctggcaagcagctggaagatgnccgcaccctgtctgactacaac 979 Query: 421 atccagaaggagtccaccctccacct 446 |||||||| ||||||||||||||||| Sbjct: 980 atccagaaagagtccaccctccacct 1005
>gb|AY290730.1| Triticum aestivum ubiquitin-like mRNA, partial sequence Length = 510 Score = 311 bits (157), Expect = 2e-81 Identities = 205/221 (92%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 ||||||||||||| ||||||||||| || |||||||||||||| || ||||| ||||||| Sbjct: 164 agatgcagatcttcgtgaagaccctgacgggcaagaccatcacgctggaggtggagtcct 223 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 | ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 224 cggacaccatcgacaacgtcaaggccaagatccaggacaaggagggcatcccgccggacc 283 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 |||||||||||||||| || || |||||||| ||||||||||||||||| || ||||||| Sbjct: 284 agcagcgcctcatcttcgccggtaagcagctcgaggacggccgcaccctcgccgactaca 343 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctc 459 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 344 acatccagaaggagtccaccctccacctggtgctccgcctc 384 Score = 198 bits (100), Expect = 2e-47 Identities = 170/192 (88%), Gaps = 2/192 (1%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||||||||||||||||||||| || |||||||||||||| ||||||| ||||| ||| Sbjct: 166 atgcagatcttcgtgaagaccctgacgggcaagaccatcacgctggaggtggagtcctcg 225 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 ||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||| Sbjct: 226 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcatcccgccggaccag 285 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 |||| ||||||| || | | || |||||||| || || ||||| ||||| || | ||||| Sbjct: 286 cagc-gcctcatcttcgcc-ggtaagcagctcgaggacggccgcaccctcgccgactaca 343 Query: 649 acatccagaagg 660 |||||||||||| Sbjct: 344 acatccagaagg 355
>gb|DQ216234.1| Taeniopygia guttata clone 0058P0013A07 ubiquitin C variant 1-like mRNA, complete sequence Length = 1347 Score = 309 bits (156), Expect = 8e-81 Identities = 303/352 (86%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| || |||||| || Sbjct: 524 gatgcagatctttgtgaagaccctgactggcaagaccatcaccctggaagttgagcccag 583 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || || ||||| ||||||||||||||||| || ||||| || ||||| Sbjct: 584 tgacaccattgaaaatgtgaaggccaagatccaggacaaggaaggtatccctcctgacca 643 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || ||||||||||| ||||| || ||||| || |||||||| |||||||||| Sbjct: 644 gcagaggctgatctttgctggtaagcaactggaggatgggcgcaccctctctgactacaa 703 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| || Sbjct: 704 catccagaaggaatccaccctgcacctggtgctgcgcctcaggggtgggatgcagatttt 763 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||| | |||| | ||||||||||| Sbjct: 764 tgtgaagaccctgactggcaagaccatcaccctggaagttgagcccagtgacaccatcga 823 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || || ||||| ||||||||||||||||| |||||| |||| ||||||||| Sbjct: 824 gaatgtgaaggccaagatccaggacaaggaaggcatttccccagaccagcag 875 Score = 307 bits (155), Expect = 3e-80 Identities = 355/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||||||||| ||| || | Sbjct: 69 atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggtggagcccagt 128 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 129 gacaccattgaaaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| || || || |||||||| | ||||||||| Sbjct: 189 cagaggctgatctttgctggcaagcagctggaagatgggcgcaccctctccgactacaac 248 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| || || ||||||||||| ||||| || ||||| |||||||||||| Sbjct: 249 atccagaaagagtcaactctgcacctggtgctgcgcctgagaggtgggatgcagatcttc 308 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||| ||||| ||||||||||||||||| || |||| ||| | ||||||||||| Sbjct: 309 gtgaaaaccctgaccggcaagaccatcactctcgaggtggagcccagtgacaccatcgag 368 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||| || || || || ||||||||| || || || Sbjct: 369 aatgtgaaggccaagatccaggacaaggaaggtatccctcctgaccagcagagg-ctgat 427 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || ||||| || ||||| ||| ||||||||||||||||| Sbjct: 428 ctttg-ctggcaagcagctggaagatgggcgcaccctgtctgactacaacatccagaagg 486 Score = 285 bits (144), Expect = 1e-73 Identities = 353/421 (83%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||| ||||| ||||||||||||||||| || ||||| ||| || Sbjct: 296 gatgcagatcttcgtgaaaaccctgaccggcaagaccatcactctcgaggtggagcccag 355 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || || ||||| ||||||||||||||||| || ||||| || ||||| Sbjct: 356 tgacaccatcgagaatgtgaaggccaagatccaggacaaggaaggtatccctcctgacca 415 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||||||||||||||| || || || |||||||| |||||||||| Sbjct: 416 gcagaggctgatctttgctggcaagcagctggaagatgggcgcaccctgtctgactacaa 475 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 476 catccagaaggaatccaccctgcacctggtgctgcgcctgagaggtgggatgcagatctt 535 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||| | |||| | |||||||| || Sbjct: 536 tgtgaagaccctgactggcaagaccatcaccctggaagttgagcccagtgacaccattga 595 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || || ||||| ||||||||||||||||| || || || || ||||||||| || || | Sbjct: 596 aaatgtgaaggccaagatccaggacaaggaaggtatccctcctgaccagcagagg-ctga 654 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | || ||||| || || ||||| || ||||| ||| |||||||||||||||| Sbjct: 655 tctttg-ctggtaagcaactggaggatgggcgcaccctctctgactacaacatccagaag 713 Query: 660 g 660 | Sbjct: 714 g 714 Score = 151 bits (76), Expect = 4e-33 Identities = 190/228 (83%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 ||||||||| |||||||||||||| || ||||||||||||||||| || |||||| || Sbjct: 752 gatgcagatttttgtgaagaccctgactggcaagaccatcaccctggaagttgagcccag 811 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || || ||||| ||||||||||||||||| ||||| |||| ||||| Sbjct: 812 tgacaccatcgagaatgtgaaggccaagatccaggacaaggaaggcatttccccagacca 871 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | || || |||||||||||||| || || || |||||||| | || ||||| Sbjct: 872 gcagaggttgattttcgctggcaagcagctggaagatgggcgcaccctgtccgattacaa 931 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 |||||||||||||| || | ||||||||| | |||||||||||||| Sbjct: 932 catccagaaggagttaactttgcacctggtggtgcgcctcaggggtgg 979 Score = 123 bits (62), Expect = 1e-24 Identities = 177/214 (82%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||||||||| ||||||||||| || ||||||||||||||||| |||| ||| | Sbjct: 69 atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggtggagcccagt 128 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 |||||||| || || || ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129 gacaccattgaaaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||| || || || |||| | ||||||||||| || ||||| || ||||| | | ||||| Sbjct: 189 cagagg-ctgatctttg-ctggcaagcagctggaagatgggcgcaccctctccgactaca 246 Query: 649 acatccagaaggggtcacccctgcccctggngct 682 |||||||||| | |||| | |||| ||||| ||| Sbjct: 247 acatccagaaagagtcaactctgcacctggtgct 280
>gb|DQ216232.1| Taeniopygia guttata clone 0058P0060G06 ubiquitin C variant 1-like mRNA, complete sequence Length = 1306 Score = 309 bits (156), Expect = 8e-81 Identities = 374/444 (84%), Gaps = 3/444 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||||||||||||||| || ||||||||||||||||| || |||||| || Sbjct: 524 gatgcagatctttgtgaagaccctgactggcaagaccatcaccctggaagttgagcccag 583 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || || ||||| ||||||||||||||||| || ||||| || ||||| Sbjct: 584 tgacaccattgaaaatgtgaaggccaagatccaggacaaggaaggtatccctcctgacca 643 Query: 360 gcagcgcctcatctttgctggcaagcagcttg-aggacggccgcacccttgctgactaca 418 |||| | || ||||||||||| || || || | |||| || |||||||| ||||||||| Sbjct: 644 gcagaggctgatctttgctggtaaacaactgggaggatgggcgcaccctctctgactaca 703 Query: 419 acatccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatct 478 ||||||||||||| |||||||| ||||| || || |||||||||||||| |||||||||| Sbjct: 704 acatccagaaggaatccaccctgcaccttgtcctgcgcctcaggggtgggatgcagatct 763 Query: 479 tcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcg 538 ||||||||||||| || |||||||||||||||||||| | |||| | |||||||||| Sbjct: 764 tcgtgaagaccctgactggcaagaccatcaccctggaagttgagcccagtgacaccatcg 823 Query: 539 acaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctc 598 | || || ||||| ||||||||||||||||| ||||||||||| ||||||||| || || Sbjct: 824 agaatgtgaaggccaagatccaggacaaggaaggcattcccccagaccagcagagg-ctg 882 Query: 599 atntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 || ||| | ||||||||||| || ||||| || ||||| | | ||||||||||||||| Sbjct: 883 at-tttcgctggcaagcagctggaagatgggcgcaccctgtccgactacaacatccagaa 941 Query: 659 ggggtcacccctgcccctggngct 682 || |||| | |||| ||||| ||| Sbjct: 942 ggagtcaactctgcacctggtgct 965 Score = 307 bits (155), Expect = 3e-80 Identities = 355/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| || ||||||||||||||||||||||| ||| || | Sbjct: 69 atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggtggagcccagt 128 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || || ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 129 gacaccattgaaaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| || || || |||||||| | ||||||||| Sbjct: 189 cagaggctgatctttgctggcaagcagctggaagatgggcgcaccctctccgactacaac 248 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| || || ||||||||||| ||||| || ||||| |||||||||||| Sbjct: 249 atccagaaagagtcaactctgcacctggtgctgcgcctgagaggtgggatgcagatcttc 308 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||| ||||| ||||||||||||||||| || |||| ||| | ||||||||||| Sbjct: 309 gtgaaaaccctgaccggcaagaccatcactctcgaggtggagcccagtgacaccatcgag 368 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||| || || || || ||||||||| || || || Sbjct: 369 aatgtgaaggccaagatccaggacaaggaaggtatccctcctgaccagcagagg-ctgat 427 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || ||||| || ||||| ||| ||||||||||||||||| Sbjct: 428 ctttg-ctggcaagcagctggaagatgggcgcaccctgtctgactacaacatccagaagg 486 Score = 278 bits (140), Expect = 3e-71 Identities = 299/352 (84%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||| ||||| ||||||||||||||||| || ||||| ||| || Sbjct: 296 gatgcagatcttcgtgaaaaccctgaccggcaagaccatcactctcgaggtggagcccag 355 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || || ||||| ||||||||||||||||| || ||||| || ||||| Sbjct: 356 tgacaccatcgagaatgtgaaggccaagatccaggacaaggaaggtatccctcctgacca 415 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || |||||||||||||||||||| || || || |||||||| |||||||||| Sbjct: 416 gcagaggctgatctttgctggcaagcagctggaagatgggcgcaccctgtctgactacaa 475 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||| |||||||| ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 476 catccagaaggaatccaccctgcacctggtgctgcgcctgagaggtgggatgcagatctt 535 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||||| || |||||||||||||||||||| | |||| | |||||||| || Sbjct: 536 tgtgaagaccctgactggcaagaccatcaccctggaagttgagcccagtgacaccattga 595 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || || ||||| ||||||||||||||||| || || || || ||||||||| Sbjct: 596 aaatgtgaaggccaagatccaggacaaggaaggtatccctcctgaccagcag 647 Score = 198 bits (100), Expect = 2e-47 Identities = 196/228 (85%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || ||||||||||||||||| || |||||| || Sbjct: 753 gatgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaagttgagcccag 812 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || || ||||| ||||||||||||||||| ||||| ||||| ||||| Sbjct: 813 tgacaccatcgagaatgtgaaggccaagatccaggacaaggaaggcattcccccagacca 872 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || || || |||||||||||||| || || || |||||||| | |||||||| Sbjct: 873 gcagaggctgattttcgctggcaagcagctggaagatgggcgcaccctgtccgactacaa 932 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtgg 467 ||||||||||||||| || || ||||||||||| |||||||||||||| Sbjct: 933 catccagaaggagtcaactctgcacctggtgctgcgcctcaggggtgg 980 Score = 123 bits (62), Expect = 1e-24 Identities = 177/214 (82%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||||||||| ||||||||||| || ||||||||||||||||| |||| ||| | Sbjct: 69 atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggtggagcccagt 128 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 |||||||| || || || ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129 gacaccattgaaaatgtgaaggccaagatccaggacaaggagggcattcccccagaccag 188 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 ||| || || || |||| | ||||||||||| || ||||| || ||||| | | ||||| Sbjct: 189 cagagg-ctgatctttg-ctggcaagcagctggaagatgggcgcaccctctccgactaca 246 Query: 649 acatccagaaggggtcacccctgcccctggngct 682 |||||||||| | |||| | |||| ||||| ||| Sbjct: 247 acatccagaaagagtcaactctgcacctggtgct 280
>dbj|AB089615.1| Gorilla gorilla UbC gene for polyubiquitin C, complete cds Length = 1830 Score = 309 bits (156), Expect = 8e-81 Identities = 372/443 (83%), Gaps = 2/443 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || |||||||||||||||||||| ||| || Sbjct: 1140 gatgcagatcttcgtgaagaccctgactggtaagaccatcacccttgaggtcgagcccag 1199 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| |||||||| |||||||| |||||||| || ||||| Sbjct: 1200 tgacaccatcgagaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgacca 1259 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| || |||||||| ||||| || |||||||| |||||||||| Sbjct: 1260 gcagaggttgatctttgccggaaagcagctggaggatgggcgcaccctgtctgactacaa 1319 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 1320 catccagaaagagtccaccctgcacctggtgctccgtctcagaggtgggatgcagatctt 1379 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || || |||||||||||||| |||| ||| | ||||||||||| Sbjct: 1380 cgtgaagaccctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcga 1439 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||||||||| |||||||| |||||||| ||||| || || ||||||||| || | | Sbjct: 1440 gaacgtcaaggcaaagatccaagacaaggaaggcatccctcctgaccagcagagg-ttga 1498 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | || |||||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1499 tctttgcc-ggaaagcagctggaagatggacgcaccctgtctgactacaacatccagaaa 1557 Query: 660 gggtcacccctgcccctggngct 682 | ||| |||||| ||||| ||| Sbjct: 1558 gagtctaccctgcacctggtgct 1580 Score = 293 bits (148), Expect = 5e-76 Identities = 370/443 (83%), Gaps = 2/443 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || |||||||||||||| ||||| ||| || Sbjct: 912 gatgcagatcttcgtgaagaccctgactggtaagaccatcaccctcgaggtcgagcccag 971 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| |||||||| || |||||||| |||||||| |||||||| || ||||| Sbjct: 972 tgacaccatcgagaacgtcaaagcaaagatccaagacaaggaaggcatccctcctgacca 1031 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | ||||||||||| |||||||| || || || |||||||| |||||||||| Sbjct: 1032 gcagaggttgatctttgctggaaagcagctggaagatgggcgcaccctgtctgactacaa 1091 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 1092 catccagaaagagtccaccctgcacctggtgctccgtctcagaggtgggatgcagatctt 1151 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || || |||||||||||||| |||| ||| | ||||||||||| Sbjct: 1152 cgtgaagaccctgactggtaagaccatcacccttgaggtcgagcccagtgacaccatcga 1211 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 || |||||||| |||||||| |||||||| ||||| || || ||||||||| || | | Sbjct: 1212 gaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgaccagcagagg-ttga 1270 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | || |||||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1271 tctttgcc-ggaaagcagctggaggatgggcgcaccctgtctgactacaacatccagaaa 1329 Query: 660 gggtcacccctgcccctggngct 682 | ||| |||||| ||||| ||| Sbjct: 1330 gagtccaccctgcacctggtgct 1352 Score = 293 bits (148), Expect = 5e-76 Identities = 370/443 (83%), Gaps = 2/443 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || |||||||||||||| ||||| ||| || Sbjct: 228 gatgcagatcttcgtgaagaccctgactggtaagaccatcaccctcgaggtcgagcccag 287 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| |||||||| || |||||||| |||||||| |||||||| || ||||| Sbjct: 288 tgacaccatcgagaacgtcaaagcaaagatccaagacaaggaaggcatccctcctgacca 347 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| || |||||||| ||||| || |||||||| |||||||||| Sbjct: 348 gcagaggttgatctttgccggaaagcagctggaggatgggcgcaccctgtctgactacaa 407 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 408 catccagaaagagtccaccctgcacctggtgctccgtctcagaggtgggatgcagatctt 467 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || || |||||||||||||| |||| ||| | ||||||||||| Sbjct: 468 cgtgaagaccctgactggtaagaccatcaccctcgaggtcgagcccagtgacaccatcga 527 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 |||||||| || |||||||| |||||||| ||||| || || ||||||||| || | | Sbjct: 528 gaacgtcaaagcaaagatccaagacaaggaaggcatccctcctgaccagcagagg-ttga 586 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | || |||||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 587 tctttgcc-ggaaagcagctggaggatgggcgcaccctgtctgactacaacatccagaaa 645 Query: 660 gggtcacccctgcccctggngct 682 | ||| |||||| ||||| ||| Sbjct: 646 gagtccaccctgcacctggtgct 668 Score = 291 bits (147), Expect = 2e-75 Identities = 370/443 (83%), Gaps = 2/443 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || |||||||||||||| ||||| ||| || Sbjct: 684 gatgcagatcttcgtgaagaccctgactggtaagaccatcaccctcgaggtcgagcccag 743 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| |||||||| || |||||||| |||||||| |||||||| || ||||| Sbjct: 744 tgacaccatcgagaacgtcaaagcaaagatccaagacaaggaaggcatccctcctgacca 803 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | ||||||||||| |||||||| || || || |||||||| |||||||||| Sbjct: 804 gcagaggttgatctttgctggaaagcagctggaagatgggcgcaccctgtctgactacaa 863 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 864 catccagaaagagtccaccctgcacctggtgctccgtctcagaggtgggatgcagatctt 923 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || || |||||||||||||| |||| ||| | ||||||||||| Sbjct: 924 cgtgaagaccctgactggtaagaccatcaccctcgaggtcgagcccagtgacaccatcga 983 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 |||||||| || |||||||| |||||||| ||||| || || ||||||||| || | | Sbjct: 984 gaacgtcaaagcaaagatccaagacaaggaaggcatccctcctgaccagcagagg-ttga 1042 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | || |||||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 1043 tctttg-ctggaaagcagctggaagatgggcgcaccctgtctgactacaacatccagaaa 1101 Query: 660 gggtcacccctgcccctggngct 682 | ||| |||||| ||||| ||| Sbjct: 1102 gagtccaccctgcacctggtgct 1124 Score = 291 bits (147), Expect = 2e-75 Identities = 370/443 (83%), Gaps = 2/443 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || |||||||||||||| ||||| ||| || Sbjct: 456 gatgcagatcttcgtgaagaccctgactggtaagaccatcaccctcgaggtcgagcccag 515 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| |||||||| || |||||||| |||||||| |||||||| || ||||| Sbjct: 516 tgacaccatcgagaacgtcaaagcaaagatccaagacaaggaaggcatccctcctgacca 575 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| || |||||||| ||||| || |||||||| |||||||||| Sbjct: 576 gcagaggttgatctttgccggaaagcagctggaggatgggcgcaccctgtctgactacaa 635 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 636 catccagaaagagtccaccctgcacctggtgctccgtctcagaggtgggatgcagatctt 695 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || || |||||||||||||| |||| ||| | ||||||||||| Sbjct: 696 cgtgaagaccctgactggtaagaccatcaccctcgaggtcgagcccagtgacaccatcga 755 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 |||||||| || |||||||| |||||||| ||||| || || ||||||||| || | | Sbjct: 756 gaacgtcaaagcaaagatccaagacaaggaaggcatccctcctgaccagcagagg-ttga 814 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | || |||||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 815 tctttg-ctggaaagcagctggaagatgggcgcaccctgtctgactacaacatccagaaa 873 Query: 660 gggtcacccctgcccctggngct 682 | ||| |||||| ||||| ||| Sbjct: 874 gagtccaccctgcacctggtgct 896 Score = 285 bits (144), Expect = 1e-73 Identities = 300/352 (85%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || |||||||||||||| ||||| ||| || Sbjct: 1368 gatgcagatcttcgtgaagaccctgactggtaagaccatcaccctcgaggtggagcccag 1427 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| ||||||||||| |||||||| |||||||| |||||||| || ||||| Sbjct: 1428 tgacaccatcgagaacgtcaaggcaaagatccaagacaaggaaggcatccctcctgacca 1487 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| || |||||||| || || || |||||||| |||||||||| Sbjct: 1488 gcagaggttgatctttgccggaaagcagctggaagatggacgcaccctgtctgactacaa 1547 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 1548 catccagaaagagtctaccctgcacctggtgctccgtctcagaggtgggatgcagatctt 1607 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || ||||||||||||||||| |||| ||| | ||||||||||| Sbjct: 1608 cgtgaagaccctgactggcaagaccatcaccctcgaggtggagcccagtgacaccatcga 1667 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || |||||||| |||||||| |||||||| ||||| || || ||||||||| Sbjct: 1668 gaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgaccagcag 1719 Score = 260 bits (131), Expect = 7e-66 Identities = 365/442 (82%), Gaps = 2/442 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||| || || || |||||||||||||| ||||| ||| || | Sbjct: 1 atgcagatcttcgtgaagactctgactggtaagaccatcaccctcgaggtcgagcccagt 60 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || |||||||| |||||||| || ||||| |||||||| || |||||| Sbjct: 61 gacaccatcgagaatgtcaaggcaaagatccaagataaggaaggcatccctcctgaccag 120 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||| || ||||| || || || |||||||| |||| |||||| Sbjct: 121 cagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgattacaac 180 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||| ||||| |||||||||||||| ||||| ||||| |||||||||||| Sbjct: 181 atccagaaagagtctaccctgcacctggtgctccgtctcagaggtgggatgcagatcttc 240 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| || || |||||||||||||| |||| ||| | ||||||||||| Sbjct: 241 gtgaagaccctgactggtaagaccatcaccctcgaggtcgagcccagtgacaccatcgag 300 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 |||||||| || |||||||| |||||||| ||||| || || ||||||||| || | || Sbjct: 301 aacgtcaaagcaaagatccaagacaaggaaggcatccctcctgaccagcagagg-ttgat 359 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | || |||||||| || ||||| || ||||| ||| ||||||||||||||| | Sbjct: 360 ctttgcc-ggaaagcagctggaggatgggcgcaccctgtctgactacaacatccagaaag 418 Query: 661 ggtcacccctgcccctggngct 682 ||| |||||| ||||| ||| Sbjct: 419 agtccaccctgcacctggtgct 440 Score = 163 bits (82), Expect = 1e-36 Identities = 169/198 (85%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||| || Sbjct: 1596 gatgcagatcttcgtgaagaccctgactggcaagaccatcaccctcgaggtggagcccag 1655 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| |||||||| |||||||| |||||||| || ||||| Sbjct: 1656 tgacaccatcgagaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgacca 1715 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | ||||||||||| || ||||| || || || |||||||| |||||||||| Sbjct: 1716 gcagaggttaatctttgctgggaaacagctggaagatggacgcaccctgtctgactacaa 1775 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 1776 catccagaaagagtccac 1793
>emb|CR734308.2|CNS0GTDF Tetraodon nigroviridis full-length cDNA Length = 684 Score = 307 bits (155), Expect = 3e-80 Identities = 355/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||| || ||||| ||||||||||| ||||| ||| || Sbjct: 2 atgcagatcttcgtcaagacccttactggcaaaaccatcaccctcgaggtggagcccagc 61 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 62 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 121 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 122 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 181 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 182 atccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 241 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 242 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 301 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 302 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 360 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| |||||||| ||||| | | ||||||||||||||||| Sbjct: 361 ctttg-ctggcaagcagcttgaagatggccgcaccctctccgactacaacatccagaagg 419 Score = 301 bits (152), Expect = 2e-78 Identities = 352/417 (84%), Gaps = 2/417 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 230 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 289 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 290 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 349 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 350 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctctccgactacaac 409 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 410 atccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 469 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 470 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 529 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 530 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 588 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccaga 657 |||| | ||||||||||| || |||||||| ||||| | | |||||||||||||| Sbjct: 589 ctttg-ctggcaagcagctggaagatggccgcaccctgtccgactacaacatccaga 644
>emb|CR731610.3|CNS0GRGF Tetraodon nigroviridis full-length cDNA Length = 681 Score = 307 bits (155), Expect = 3e-80 Identities = 355/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 2 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 61 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 62 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 121 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 122 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 181 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 182 atccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 241 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 242 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 301 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| || |||||||||||||| ||||||||||| || |||||| || || || Sbjct: 302 aacgtgaaggccaaaatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 360 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| |||||||| ||||| | | ||||||||||||||||| Sbjct: 361 ctttg-ctggcaagcagcttgaagatggccgcaccctctccgactacaacatccagaagg 419 Score = 299 bits (151), Expect = 8e-78 Identities = 354/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 230 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 289 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| || |||||||||||||| ||||| ||||| || ||| Sbjct: 290 gacaccattgagaacgtgaaggccaaaatccaggacaaggaaggcattccccctgatcag 349 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 350 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctctccgactacaac 409 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 410 atccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 469 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 470 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 529 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 530 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 588 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 589 ctttg-ctggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaagg 647 Score = 186 bits (94), Expect = 8e-44 Identities = 178/206 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 458 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 517 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 518 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 577 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| || || ||||||||||| | ||||||||| Sbjct: 578 cagaggctgatctttgctggcaagcagctggaagatggccgcaccctgtccgactacaac 637 Query: 421 atccagaaggagtccaccctccacct 446 |||||||||||||||||||||||||| Sbjct: 638 atccagaaggagtccaccctccacct 663
>emb|CR730166.2|CNS0GQCC Tetraodon nigroviridis full-length cDNA Length = 796 Score = 307 bits (155), Expect = 3e-80 Identities = 355/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || | Sbjct: 231 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagt 290 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 291 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 350 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 351 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 410 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 411 atccagaaagagtccaccctccaccttgtccttcgtctgaggggaggcatgcagatcttc 470 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 471 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 530 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 531 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 589 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 590 ctttg-ctggcaagcagctagaagatggccgcaccctgtccgactacaacatccagaagg 648 Score = 297 bits (150), Expect = 3e-77 Identities = 354/419 (84%), Gaps = 3/419 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 2 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 61 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcat-ccccccggacca 359 ||||| || || ||||| ||||| ||||||||||||||||| ||||| |||||| || || Sbjct: 62 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattcccccctgatca 121 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || ||||||||||||||||||||||| || ||||||||||| | |||||||| Sbjct: 122 gcagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaa 181 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 |||||||||||||||||||||||||| || || || || ||||| || ||||||||||| Sbjct: 182 tatccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatctt 241 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||| ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 242 cgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagtgacaccattga 301 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || | Sbjct: 302 gaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctga 360 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 | |||| | |||||||||||||| |||||||| ||||| | | ||||||||||||||| Sbjct: 361 tctttg-ctggcaagcagcttgaagatggccgcaccctgtccgactacaacatccagaa 418 Score = 186 bits (94), Expect = 8e-44 Identities = 178/206 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 459 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 518 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 519 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 578 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| || || ||||||||||| | ||||||||| Sbjct: 579 cagaggctgatctttgctggcaagcagctagaagatggccgcaccctgtccgactacaac 638 Query: 421 atccagaaggagtccaccctccacct 446 |||||||||||||||||||||||||| Sbjct: 639 atccagaaggagtccaccctccacct 664 Score = 111 bits (56), Expect = 4e-21 Identities = 161/193 (83%), Gaps = 3/193 (1%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 |||||||||||||| ||||||||||| ||||| ||||||||||| |||| ||| | Sbjct: 2 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 61 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccg-gacca 587 |||||||| || ||||| ||||| ||||||||||||||||| ||||||||||| || || Sbjct: 62 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattcccccctgatca 121 Query: 588 gcagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctac 647 |||| ||| | || |||| | |||||||||||||| |||||||| ||||| | | |||| Sbjct: 122 gcagaggc-tgatctttg-ctggcaagcagcttgaagatggccgcaccctgtccgactac 179 Query: 648 aacatccagaagg 660 || |||||||||| Sbjct: 180 aatatccagaagg 192
>emb|CR729662.2|CNS0GPYC Tetraodon nigroviridis full-length cDNA Length = 796 Score = 307 bits (155), Expect = 3e-80 Identities = 355/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 230 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 289 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||||||||| ||||||||||||||||| ||||| | || || ||| Sbjct: 290 gacaccattgagaacgtcaaggccaagatccaggacaaggaaggcattactcctgatcag 349 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 350 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctctccgactacaac 409 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 410 atccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 469 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 470 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 529 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 530 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 588 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| |||||||| ||||| | | ||||||||||||||||| Sbjct: 589 ctttg-ctggcaagcagcttgaagatggccgcaccctgtccgactacaacatccagaagg 647 Score = 283 bits (143), Expect = 5e-73 Identities = 352/420 (83%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||| || ||||| ||||||||||| ||||| ||| || Sbjct: 2 atgcagatcttcgtcaagacccttactggcaaaaccatcaccctcgaggtggagcccagc 61 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 62 gataccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 121 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 122 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 181 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 182 atccagaaagagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 241 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 242 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 301 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||||||||| ||||||||||||||||| |||||| | || || |||||| || || || Sbjct: 302 aacgtcaaggccaagatccaggacaaggaaggcattactcctgatcagcagagg-ctgat 360 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| |||||||| ||||| | | ||||||||||||||||| Sbjct: 361 ctttg-ctggcaagcagcttgaagatggccgcaccctctccgactacaacatccagaagg 419 Score = 194 bits (98), Expect = 3e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 458 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 517 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 518 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 577 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 578 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 637 Query: 421 atccagaaggagtccaccctccacct 446 |||||||||||||||||||||||||| Sbjct: 638 atccagaaggagtccaccctccacct 663
>emb|CR729083.2|CNS0GPI9 Tetraodon nigroviridis full-length cDNA Length = 754 Score = 307 bits (155), Expect = 3e-80 Identities = 355/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 71 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 130 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 131 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 190 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 191 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 250 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 251 atccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 310 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 311 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 370 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || | |||| || || || Sbjct: 371 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcggcagagg-ctgat 429 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| |||||||| ||||| | | ||||||||||||||||| Sbjct: 430 ctttg-ctggcaagcagcttgaagatggccgcaccctgtccgactacaacatccagaagg 488 Score = 291 bits (147), Expect = 2e-75 Identities = 353/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 299 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 358 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || | | Sbjct: 359 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcgg 418 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 419 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 478 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 479 atccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 538 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| || ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 539 gtcaagacccttactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 598 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 599 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 657 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 658 ctttg-ctggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaagg 716 Score = 170 bits (86), Expect = 5e-39 Identities = 176/206 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||| || ||||| ||||||||||| ||||| ||| || Sbjct: 527 atgcagatcttcgtcaagacccttactggcaaaaccatcaccctcgaggtggagcccagc 586 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 587 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 646 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| || || ||||||||||| | ||||||||| Sbjct: 647 cagaggctgatctttgctggcaagcagctggaagatggccgcaccctgtccgactacaac 706 Query: 421 atccagaaggagtccaccctccacct 446 ||||||||||||||||||| |||||| Sbjct: 707 atccagaaggagtccaccccccacct 732
>emb|CR701645.2|CNS0G4C9 Tetraodon nigroviridis full-length cDNA Length = 787 Score = 307 bits (155), Expect = 3e-80 Identities = 355/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 2 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 61 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 62 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 121 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 122 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 181 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 182 atccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 241 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 242 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 301 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 302 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 360 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 361 ctttg-ctggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaagg 419 Score = 236 bits (119), Expect = 1e-58 Identities = 346/420 (82%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 230 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 289 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 290 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 349 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| || || ||||||||||| | ||||||||| Sbjct: 350 cagaggctgatctttgctggcaagcagctggaagatggccgcaccctgtccgactacaac 409 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 ||||||||||||||||| |||||||| || || || || ||||| || |||||||||||| Sbjct: 410 atccagaaggagtccactctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 469 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| || ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 470 gtcaagacccttactggcaaaaccatcaccctcgaggtggagcccagtgacaccattgag 529 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||| | || ||||||||||| || |||||||| || || |||||| || || || Sbjct: 530 aatgtcaagaccaaaatccaggacaaagaaggcattcctcctgatcagcagagg-ctgat 588 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| | | |||||| ||||| | | ||||||||||||||||| Sbjct: 589 ctttg-ctggcaagcagctagggggtggccgcaccctgtccgactacaacatccagaagg 647 Score = 147 bits (74), Expect = 7e-32 Identities = 173/206 (83%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||| || ||||| ||||||||||| ||||| ||| || | Sbjct: 458 atgcagatcttcgtcaagacccttactggcaaaaccatcaccctcgaggtggagcccagt 517 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||| | || ||||||||||| || ||||| || || || ||| Sbjct: 518 gacaccattgagaatgtcaagaccaaaatccaggacaaagaaggcattcctcctgatcag 577 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| | || ||||||||||| | ||||||||| Sbjct: 578 cagaggctgatctttgctggcaagcagctagggggtggccgcaccctgtccgactacaac 637 Query: 421 atccagaaggagtccaccctccacct 446 |||||||||||||||||||||||||| Sbjct: 638 atccagaaggagtccaccctccacct 663
>emb|CR680956.2|CNS0FODK Tetraodon nigroviridis full-length cDNA Length = 622 Score = 307 bits (155), Expect = 3e-80 Identities = 355/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 58 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 117 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 118 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 177 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 178 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 237 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 238 atccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 297 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 298 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 357 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 358 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 416 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 417 ctttg-ctggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaagg 475 Score = 186 bits (94), Expect = 8e-44 Identities = 178/206 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 286 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 345 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 346 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 405 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| || || ||||||||||| | ||||||||| Sbjct: 406 cagaggctgatctttgctggcaagcagctggaagatggccgcaccctgtccgactacaac 465 Query: 421 atccagaaggagtccaccctccacct 446 |||||||||||||||||||||||||| Sbjct: 466 atccagaaggagtccaccctccacct 491
>emb|CR680188.2|CNS0FNS8 Tetraodon nigroviridis full-length cDNA Length = 657 Score = 307 bits (155), Expect = 3e-80 Identities = 355/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 76 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 135 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 136 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 195 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 196 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 255 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 256 atccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 315 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 316 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 375 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 376 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 434 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 435 ctttg-ctggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaagg 493 Score = 178 bits (90), Expect = 2e-41 Identities = 174/202 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 304 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 363 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 364 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 423 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| || || ||||||||||| | ||||||||| Sbjct: 424 cagaggctgatctttgctggcaagcagctggaagatggccgcaccctgtccgactacaac 483 Query: 421 atccagaaggagtccaccctcc 442 |||||||||||||||||||||| Sbjct: 484 atccagaaggagtccaccctcc 505
>emb|CR666965.2|CNS0FDLN Tetraodon nigroviridis full-length cDNA Length = 797 Score = 307 bits (155), Expect = 3e-80 Identities = 355/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || | Sbjct: 230 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagt 289 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 290 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 349 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 350 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 409 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 410 atccagaaagagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 469 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 470 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 529 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 530 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 588 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 589 ctttg-ctggcaagcagctagaagatggccgcaccctgtccgactacaacatccagaagg 647 Score = 295 bits (149), Expect = 1e-76 Identities = 352/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 2 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 61 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 62 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 121 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 122 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 181 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| |||||||| || || || || ||||| || |||||||||||| Sbjct: 182 atccagaaagagtccactctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 241 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 242 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagtgacaccattgag 301 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 302 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 360 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | |||||||||||||| |||||||| ||||| | | ||||||||||||||| Sbjct: 361 ctttg-ctggcaagcagcttgaagatggccgcaccctgtccgactacaacatccagaa 417 Score = 186 bits (94), Expect = 8e-44 Identities = 178/206 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 458 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 517 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 518 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 577 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| || || ||||||||||| | ||||||||| Sbjct: 578 cagaggctgatctttgctggcaagcagctagaagatggccgcaccctgtccgactacaac 637 Query: 421 atccagaaggagtccaccctccacct 446 |||||||||||||||||||||||||| Sbjct: 638 atccagaaggagtccaccctccacct 663
>emb|CR661192.2|CNS0F95A Tetraodon nigroviridis full-length cDNA Length = 754 Score = 303 bits (153), Expect = 5e-79 Identities = 353/418 (84%), Gaps = 2/418 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 2 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 61 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 62 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 121 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 122 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtctgactacaac 181 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| |||||||| |||||||| || || || || ||||| || |||||||||||| Sbjct: 182 atccagaaagagtccactctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 241 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 242 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 301 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 302 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 360 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaa 658 |||| | |||||||||||||| |||||||| ||||| | | ||||||||||||||| Sbjct: 361 ctttg-ctggcaagcagcttgaagatggccgcaccctgtccgactacaacatccagaa 417 Score = 291 bits (147), Expect = 2e-75 Identities = 353/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 230 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 289 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 290 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 349 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 350 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 409 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 410 atccagaaagagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 469 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || || |||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 470 gtcaaaaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 529 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 530 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 588 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 589 ctttg-ctggcaagcagctagaagatggccgcaccctgtccgactacaacatccagaagg 647 Score = 178 bits (90), Expect = 2e-41 Identities = 177/206 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || || |||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 458 atgcagatcttcgtcaaaaccctcactggcaaaaccatcaccctcgaggtggagcccagc 517 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 518 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 577 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| || || ||||||||||| | ||||||||| Sbjct: 578 cagaggctgatctttgctggcaagcagctagaagatggccgcaccctgtccgactacaac 637 Query: 421 atccagaaggagtccaccctccacct 446 |||||||||||||||||||||||||| Sbjct: 638 atccagaaggagtccaccctccacct 663
>gb|U82086.1|FAU82086 Fragaria ananassa polyubiquitin (FUBI1) mRNA, complete cds Length = 1374 Score = 303 bits (153), Expect = 5e-79 Identities = 354/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||| | ||||||||||| || || ||||| || ||| | | Sbjct: 26 atgcagatctttgtaaagacattgaccggcaagactattactcttgaagtcgagagcagt 85 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || |||||||| || || ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 86 gatacgatcgataatgtaaaggctaagatccaggacaaggagggcattccccctgaccag 145 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || |||||||||||||||||||||||||| ||||| ||||||||||| ||||| Sbjct: 146 cagcgtctgatctttgctggcaagcagcttgaggatggccgaacccttgctgattacaat 205 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| |||||||| ||||||| || || | ||||||||||||||||| Sbjct: 206 atccagaaggagtcgaccctccatttggtgcttcgtctgcgtggtggtatgcagatcttt 265 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| | || || |||||||||||||| |||| |||| || |||||||| ||| Sbjct: 266 gtcaagactttgactggaaagaccatcacccttgaggttgagagctctgacaccattgac 325 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| ||||| || |||||||| ||||| ||||| ||||||||| || ||||| Sbjct: 326 aatgtcaaggctaagattcangacaaggaaggcatcccccctgaccagcagagg-ctcat 384 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| |||| ||||||||||| |||||||| ||||| || | |||||| |||||||||| Sbjct: 385 ctttgccggg-aagcagcttgaggatggccgcaccctagcagactacaatatccagaagg 443 Score = 280 bits (141), Expect = 7e-72 Identities = 332/394 (84%), Gaps = 2/394 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||| | || || |||||||||||||||||||||||| |||| Sbjct: 254 atgcagatctttgtcaagactttgactggaaagaccatcacccttgaggttgagagctct 313 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || ||||| |||||||| ||||| || |||||||| ||||||||||| |||||| Sbjct: 314 gacaccattgacaatgtcaaggctaagattcangacaaggaaggcatcccccctgaccag 373 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | ||||||||||| || |||||||||||||| ||||||||||| || |||||||| Sbjct: 374 cagaggctcatctttgccgggaagcagcttgaggatggccgcaccctagcagactacaat 433 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||| || || || ||||| || |||||| | || || ||||||||||| Sbjct: 434 atccagaaggagtcgacgcttcatctggtccttcgcctccgaggcgggatgcagatcttt 493 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||| ||||| || ||||| ||||| || |||| || ||||| |||||||| Sbjct: 494 gtaaagactctcacgggtaagacaatcactcttgaggtggaaagctcggataccatcgat 553 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || || ||||| ||||||||||||||||||||||||||||| |||||||||| | || || Sbjct: 554 aatgtaaaggcaaagatccaggacaaggagggcattccccctgaccagcagc-gacttat 612 Query: 601 ntttgncgggcaagcagcttgangatggccgaac 634 |||| | ||||||||||| || ||||||||||| Sbjct: 613 ttttg-caggcaagcagctcgaggatggccgaac 645 Score = 268 bits (135), Expect = 3e-68 Identities = 350/420 (83%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 |||||||||||||| ||||||||||| |||||||| |||||| | || ||||| || ||| Sbjct: 710 atgcagatctttgttaagaccctcactggcaagactatcaccttggaagttgaatcgtct 769 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| |||||||| || ||||| ||||| ||||| ||||||||||| || || |||||| Sbjct: 770 gacaccatcgacaatgtaaaggctaagattcaggataaggagggcattcctcccgaccag 829 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||||| || ||||||||||| |||||||||||||| || || || ||||||||||||||| Sbjct: 830 cagcgacttatctttgctggaaagcagcttgaggatgggcgtacgcttgctgactacaac 889 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||| ||| || ||||| ||| | || || | || |||||||||||||| Sbjct: 890 atccagaaggagagcactctgcaccttgtgttgcgtcttcgaggcggtatgcagatcttt 949 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||||||||| ||||| ||||| ||||| || || | || || || || ||||||||| Sbjct: 950 gtgaagacccttaccggtaagactatcacgctagaagtagaatcatctgataccatcgac 1009 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||| |||||||| ||||| || || || || |||||||| ||| || Sbjct: 1010 aacgtgaaggcaaagattcaggacaaagaggggatccctcctgatcagcagcg-cctgat 1068 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 || | | ||||||||| | || ||||| || |||||||||| ||||||||||||||||| Sbjct: 1069 cttcg-ctggcaagcagttggaggatggacgtacccttgctgactacaacatccagaagg 1127 Score = 246 bits (124), Expect = 1e-61 Identities = 348/421 (82%), Gaps = 2/421 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 ||||||||||||||| ||||| ||||| || ||||| ||||| |||||||| || ||| Sbjct: 481 gatgcagatctttgtaaagactctcacgggtaagacaatcactcttgaggtggaaagctc 540 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 || || ||||| || || ||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 541 ggataccatcgataatgtaaaggcaaagatccaggacaaggagggcattccccctgacca 600 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||||| || || ||||| ||||||||||| ||||| ||||| || | ||||| || || Sbjct: 601 gcagcgacttatttttgcaggcaagcagctcgaggatggccgaacgttggctgattataa 660 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 || |||||||| || || || || ||||||||||| || | || || ||||||||||| Sbjct: 661 tattcagaaggaatcgactcttcatctggtgctccgactacgaggcggaatgcagatctt 720 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 || ||||||||||| |||||||| |||||| |||| | ||| || || ||||||||||| Sbjct: 721 tgttaagaccctcactggcaagactatcaccttggaagttgaatcgtctgacaccatcga 780 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||| || ||||| ||||| ||||| |||||||||||||| || |||||||||| | || | Sbjct: 781 caatgtaaaggctaagattcaggataaggagggcattcctcccgaccagcagc-gactta 839 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | || ||||||||||| ||||| || || ||||||| |||||||||||||||| Sbjct: 840 tctttg-ctggaaagcagcttgaggatgggcgtacgcttgctgactacaacatccagaag 898 Query: 660 g 660 | Sbjct: 899 g 899 Score = 174 bits (88), Expect = 3e-40 Identities = 166/192 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||||||||| ||||| ||||| ||||| || || || || || ||| Sbjct: 938 atgcagatctttgtgaagacccttaccggtaagactatcacgctagaagtagaatcatct 997 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 || || ||||||||||| ||||| ||||| |||||||| ||||| ||||| || || ||| Sbjct: 998 gataccatcgacaacgtgaaggcaaagattcaggacaaagaggggatccctcctgatcag 1057 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 |||||||| ||||| |||||||||||| | ||||| || || |||||||||||||||||| Sbjct: 1058 cagcgcctgatcttcgctggcaagcagttggaggatggacgtacccttgctgactacaac 1117 Query: 421 atccagaaggag 432 |||||||||||| Sbjct: 1118 atccagaaggag 1129
>gb|M60175.1|BLYMUB1 Barley ubiquitin (mub1) gene, complete cds Length = 1815 Score = 303 bits (153), Expect = 5e-79 Identities = 201/217 (92%) Strand = Plus / Plus Query: 239 agatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcct 298 ||||||||||||| ||||||||||| || |||||||||||||| || ||||| ||||| | Sbjct: 557 agatgcagatcttcgtgaagaccctgacgggcaagaccatcacgctggaggtggagtcgt 616 Query: 299 ctgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacc 358 | ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 617 cggacaccatcgacaacgtcaaggccaagatccaggacaaggagggcatcccgccggacc 676 Query: 359 agcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactaca 418 |||||||||||||||| || ||||||||||| ||||||||||||||||| || ||||||| Sbjct: 677 agcagcgcctcatcttcgccggcaagcagctcgaggacggccgcaccctcgccgactaca 736 Query: 419 acatccagaaggagtccaccctccacctggtgctccg 455 ||||||||||||||||||||||||||||||||||||| Sbjct: 737 acatccagaaggagtccaccctccacctggtgctccg 773 Score = 206 bits (104), Expect = 9e-50 Identities = 171/192 (89%), Gaps = 2/192 (1%) Strand = Plus / Plus Query: 469 atgcagatcttcgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcg 528 ||||||||||||||||||||||| || |||||||||||||| ||||||| ||||| ||| Sbjct: 559 atgcagatcttcgtgaagaccctgacgggcaagaccatcacgctggaggtggagtcgtcg 618 Query: 529 gacaccatcgacaacgtcaaggcgaagatccaggacaaggagggcattcccccggaccag 588 ||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||| Sbjct: 619 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcatcccgccggaccag 678 Query: 589 cagcggcctcatntttgncgggcaagcagcttgangatggccgaacccttgctgnctaca 648 |||| ||||||| || | | ||||||||||| || || ||||| ||||| || | ||||| Sbjct: 679 cagc-gcctcatcttcgcc-ggcaagcagctcgaggacggccgcaccctcgccgactaca 736 Query: 649 acatccagaagg 660 |||||||||||| Sbjct: 737 acatccagaagg 748
>emb|CR729943.2|CNS0GQ65 Tetraodon nigroviridis full-length cDNA Length = 805 Score = 301 bits (152), Expect = 2e-78 Identities = 356/421 (84%), Gaps = 3/421 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 2 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 61 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcat-ccccccggacca 359 ||||| || || ||||| ||||| ||||||||||||||||| ||||| |||||| || || Sbjct: 62 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattcccccctgatca 121 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || ||||||||||||||||||||||| || ||||||||||| | |||||||| Sbjct: 122 gcagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaa 181 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||||||||| || || || || ||||| || ||||||||||| Sbjct: 182 catccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatctt 241 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||| ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 242 cgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattga 301 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||| ||||| || |||||||||||||| ||||||||||| || |||||| || || | Sbjct: 302 gaacgtgaaggccaaaatccaggacaaggaaggcattccccctgatcagcagagg-ctga 360 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | |||||||||||||| |||||||| ||||| | | |||||||||||||||| Sbjct: 361 tctttg-ctggcaagcagcttgaagatggccgcaccctctccgactacaacatccagaag 419 Query: 660 g 660 | Sbjct: 420 g 420 Score = 299 bits (151), Expect = 8e-78 Identities = 354/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 231 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 290 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| || |||||||||||||| ||||| ||||| || ||| Sbjct: 291 gacaccattgagaacgtgaaggccaaaatccaggacaaggaaggcattccccctgatcag 350 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 351 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctctccgactacaac 410 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 411 atccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 470 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 471 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 530 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 531 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 589 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||||||||||| Sbjct: 590 ctttg-ctggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaagg 648 Score = 186 bits (94), Expect = 8e-44 Identities = 178/206 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 459 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 518 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 519 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 578 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| || || ||||||||||| | ||||||||| Sbjct: 579 cagaggctgatctttgctggcaagcagctggaagatggccgcaccctgtccgactacaac 638 Query: 421 atccagaaggagtccaccctccacct 446 |||||||||||||||||||||||||| Sbjct: 639 atccagaaggagtccaccctccacct 664
>emb|CR723437.2|CNS0GL5F Tetraodon nigroviridis full-length cDNA Length = 730 Score = 301 bits (152), Expect = 2e-78 Identities = 361/429 (84%), Gaps = 2/429 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 61 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 120 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 121 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 180 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 181 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 240 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 241 atccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 300 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || |||||||| || ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 301 gtcaagacccttactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 360 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 361 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 419 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| |||||||| ||||| | | |||||| |||||||||| Sbjct: 420 ctttg-ctggcaagcagcttgaagatggccgcaccctgtccgactacaaaatccagaagg 478 Query: 661 ggtcacccc 669 ||| |||| Sbjct: 479 agtcccccc 487 Score = 246 bits (124), Expect = 1e-61 Identities = 346/417 (82%), Gaps = 3/417 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || |||||||| || ||||| ||||||||||| ||||| ||| || Sbjct: 289 atgcagatcttcgtcaagacccttactggcaaaaccatcaccctcgaggtggagcccagc 348 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 349 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 408 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | |||||||| Sbjct: 409 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaaa 468 Query: 421 atccagaaggagtccaccctccacctggtgctccgc-ctcaggggtggtatgcagatctt 479 ||||||||||||||| ||| || ||| || || || || | ||| || ||||||||||| Sbjct: 469 atccagaaggagtccccccccccccttgtcctgcgttctgaagggaggcatgcagatctt 528 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||| ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 529 cgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattga 588 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || | Sbjct: 589 gaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctga 647 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccag 656 | |||| | |||||||||||||| |||||||| ||||| | | ||||||||||||| Sbjct: 648 tctttg-ctggcaagcagcttgaagatggccgcaccctgtccgactacaacatccag 703 Score = 157 bits (79), Expect = 7e-35 Identities = 176/207 (85%), Gaps = 1/207 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 518 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 577 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 578 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 637 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 638 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 697 Query: 421 atcca-gaaggagtccaccctccacct 446 ||||| | || ||||||||||||||| Sbjct: 698 atccaggggggggtccaccctccacct 724
>emb|CR668017.2|CNS0FEEV Tetraodon nigroviridis full-length cDNA Length = 682 Score = 301 bits (152), Expect = 2e-78 Identities = 356/421 (84%), Gaps = 3/421 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 2 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 61 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 62 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 121 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 122 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 181 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 182 atccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 241 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 242 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 301 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcatt-cccccggaccagcagcggcctca 599 ||||| ||||| ||||||||||||||||| |||||| ||||| || |||||| || || | Sbjct: 302 aacgtgaaggccaagatccaggacaaggaaggcattcccccctgatcagcagagg-ctga 360 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | |||||||||||||| |||||||| ||||| | | |||||||||||||||| Sbjct: 361 tctttg-ctggcaagcagcttgaagatggccgcaccctgtccgactacaacatccagaag 419 Query: 660 g 660 | Sbjct: 420 g 420 Score = 293 bits (148), Expect = 5e-76 Identities = 355/421 (84%), Gaps = 3/421 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 230 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 289 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcat-ccccccggacca 359 ||||| || || ||||| ||||| ||||||||||||||||| ||||| |||||| || || Sbjct: 290 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattcccccctgatca 349 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | || ||||||||||||||||||||||| || ||||||||||| | |||||||| Sbjct: 350 gcagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaa 409 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||||||||||||||||||||| || || || || ||||| || ||||||||||| Sbjct: 410 catccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatctt 469 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||| ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 470 cgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattga 529 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || | Sbjct: 530 gaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctga 588 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | ||||||||||| || |||||||| ||||| | | |||||| ||||||||| Sbjct: 589 tctttg-ctggcaagcagctggaagatggccgcaccctgtccgactacaatatccagaag 647 Query: 660 g 660 | Sbjct: 648 g 648 Score = 178 bits (90), Expect = 2e-41 Identities = 177/206 (85%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 459 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 518 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 519 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 578 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| || || ||||||||||| | |||||||| Sbjct: 579 cagaggctgatctttgctggcaagcagctggaagatggccgcaccctgtccgactacaat 638 Query: 421 atccagaaggagtccaccctccacct 446 |||||||||||||||||||||||||| Sbjct: 639 atccagaaggagtccaccctccacct 664
>gb|AY819759.1| Homo sapiens ubiquitin C splice variant (UBC) mRNA, complete cds, alternatively spliced Length = 718 Score = 299 bits (151), Expect = 8e-78 Identities = 370/442 (83%), Gaps = 2/442 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||| || || || |||||||||||||| ||||||||| || | Sbjct: 19 atgcagatcttcgtgaagactctgactggtaagaccatcaccctcgaggttgagcccagt 78 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || |||||||| |||||||| || ||||| |||||||| || |||||| Sbjct: 79 gacaccatcgagaatgtcaaggcaaagatccaagataaggaaggcatccctcctgaccag 138 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||| || ||||| || || || |||||||| ||||||||||| Sbjct: 139 cagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgactacaac 198 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||||||||| ||||| ||||| ||||| |||||| Sbjct: 199 atccagaaagagtccaccctgcacctggtgctccgtctcagaggtgggatgcaaatcttc 258 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| ||||| ||||||||||||||||| |||| ||| | ||||||||||| Sbjct: 259 gtgaagacactcactggcaagaccatcacccttgaggtggagcccagtgacaccatcgag 318 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 |||||||| || ||||||||||||||||| |||||||| || ||||||||| || | || Sbjct: 319 aacgtcaaagcaaagatccaggacaaggaaggcattcctcctgaccagcagagg-ttgat 377 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | || |||||||| || ||||| || ||||| ||| ||||||||||||||| | Sbjct: 378 ctttgcc-ggaaagcagctggaagatgggcgcaccctgtctgactacaacatccagaaag 436 Query: 661 ggtcacccctgcccctggngct 682 ||| |||||| ||||| ||| Sbjct: 437 agtctaccctgcacctggtgct 458 Score = 270 bits (136), Expect = 7e-69 Identities = 298/352 (84%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||| ||||| |||||||| ||||| ||||||||||||||||||||||| ||| || Sbjct: 246 gatgcaaatcttcgtgaagacactcactggcaagaccatcacccttgaggtggagcccag 305 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| |||||||| || ||||||||||||||||| ||||| || || ||||| Sbjct: 306 tgacaccatcgagaacgtcaaagcaaagatccaggacaaggaaggcattcctcctgacca 365 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| || |||||||| || || || |||||||| |||||||||| Sbjct: 366 gcagaggttgatctttgccggaaagcagctggaagatgggcgcaccctgtctgactacaa 425 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 426 catccagaaagagtctaccctgcacctggtgctccgtctcagaggtgggatgcagatctt 485 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || || |||||||||||||| |||| ||| | ||||||||||| Sbjct: 486 cgtgaagaccctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcga 545 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || |||||||| |||||||| || ||||| |||||||| || || |||||| Sbjct: 546 gaatgtcaaggcaaagatccaagataaggaaggcattcctcctgatcagcag 597 Score = 123 bits (62), Expect = 1e-24 Identities = 164/198 (82%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || |||||||||||||| ||||| ||| || Sbjct: 474 gatgcagatcttcgtgaagaccctgactggtaagaccatcaccctcgaggtggagcccag 533 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| |||||||| || ||||| ||||| || || || || Sbjct: 534 tgacaccatcgagaatgtcaaggcaaagatccaagataaggaaggcattcctcctgatca 593 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| || || ||||| || || || |||||||| |||||||||| Sbjct: 594 gcagaggttgatctttgccggaaaacagctggaagatggacgcaccctgtctgactacaa 653 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 654 catccagaaagagtccac 671 Score = 42.1 bits (21), Expect = 2.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 724 ctcactggcaagaacatcacccttg 748 ||||||||||||| ||||||||||| Sbjct: 268 ctcactggcaagaccatcacccttg 292
>gb|BC080583.1| Homo sapiens cDNA clone IMAGE:2822684, partial cds Length = 2187 Score = 299 bits (151), Expect = 8e-78 Identities = 370/442 (83%), Gaps = 2/442 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||| || || || |||||||||||||| ||||||||| || | Sbjct: 42 atgcagatcttcgtgaagactctgactggtaagaccatcaccctcgaggttgagcccagt 101 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || |||||||| |||||||| || ||||| |||||||| || |||||| Sbjct: 102 gacaccatcgagaatgtcaaggcaaagatccaagataaggaaggcatccctcctgaccag 161 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||| || ||||| || || || |||||||| ||||||||||| Sbjct: 162 cagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgactacaac 221 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||||||||| ||||| ||||| ||||| |||||| Sbjct: 222 atccagaaagagtccaccctgcacctggtgctccgtctcagaggtgggatgcaaatcttc 281 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| ||||| ||||||||||||||||| |||| ||| | ||||||||||| Sbjct: 282 gtgaagacactcactggcaagaccatcacccttgaggtggagcccagtgacaccatcgag 341 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 |||||||| || ||||||||||||||||| |||||||| || ||||||||| || | || Sbjct: 342 aacgtcaaagcaaagatccaggacaaggaaggcattcctcctgaccagcagagg-ttgat 400 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | || |||||||| || ||||| || ||||| ||| ||||||||||||||| | Sbjct: 401 ctttgcc-ggaaagcagctggaagatgggcgcaccctgtctgactacaacatccagaaag 459 Query: 661 ggtcacccctgcccctggngct 682 ||| |||||| ||||| ||| Sbjct: 460 agtctaccctgcacctggtgct 481 Score = 270 bits (136), Expect = 7e-69 Identities = 298/352 (84%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||| ||||| |||||||| ||||| ||||||||||||||||||||||| ||| || Sbjct: 269 gatgcaaatcttcgtgaagacactcactggcaagaccatcacccttgaggtggagcccag 328 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| |||||||| || ||||||||||||||||| ||||| || || ||||| Sbjct: 329 tgacaccatcgagaacgtcaaagcaaagatccaggacaaggaaggcattcctcctgacca 388 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| || |||||||| || || || |||||||| |||||||||| Sbjct: 389 gcagaggttgatctttgccggaaagcagctggaagatgggcgcaccctgtctgactacaa 448 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 449 catccagaaagagtctaccctgcacctggtgctccgtctcagaggtgggatgcagatctt 508 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || || |||||||||||||| |||| ||| | ||||||||||| Sbjct: 509 cgtgaagaccctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcga 568 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || |||||||| |||||||| || ||||| |||||||| || || |||||| Sbjct: 569 gaatgtcaaggcaaagatccaagataaggaaggcattcctcctgatcagcag 620 Score = 254 bits (128), Expect = 4e-64 Identities = 296/352 (84%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||| ||||| |||||||| ||||| ||||||||||||||||||||||| ||| || Sbjct: 725 gatgcaaatcttcgtgaagacactcactggcaagaccatcacccttgaggtcgagcccag 784 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| |||||||| || |||||||| |||||||| ||||| || || ||||| Sbjct: 785 tgacactatcgagaacgtcaaagcaaagatccaagacaaggaaggcattcctcctgacca 844 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| || |||||||| || || || |||||||| |||||||||| Sbjct: 845 gcagaggttgatctttgccggaaagcagctggaagatgggcgcaccctgtctgactacaa 904 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 905 catccagaaagagtctaccctgcacctggtgctccgtctcagaggtgggatgcagatctt 964 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || || |||||||||||||| || | ||| | |||||||| || Sbjct: 965 cgtgaagaccctgactggtaagaccatcaccctcgaagtggagccgagtgacaccattga 1024 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || |||||||| |||||||| |||||||| ||||| || || ||||||||| Sbjct: 1025 gaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgaccagcag 1076 Score = 230 bits (116), Expect = 6e-57 Identities = 281/336 (83%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || ||||||||||| || || || ||| | Sbjct: 1637 gatgcagatcttcgtgaagaccctgactggtaagaccatcactctcgaagtggagccgag 1696 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| |||||||| |||||||| |||||||| || ||||| Sbjct: 1697 tgacaccattgagaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgacca 1756 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | ||||||||||| || ||||| || || || |||||||| |||||||||| Sbjct: 1757 gcagaggttgatctttgctgggaaacagctggaagatggacgcaccctgtctgactacaa 1816 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 1817 catccagaaagagtccaccctgcacctggtgctccgtctcagaggtgggatgcagatctt 1876 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || || |||||||||||||| |||| ||| | ||||||||||| Sbjct: 1877 cgtgaagaccctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcga 1936 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcat 575 || |||||||| |||||||| || ||||| ||||| Sbjct: 1937 gaatgtcaaggcaaagatccaagataaggaaggcat 1972 Score = 230 bits (116), Expect = 6e-57 Identities = 362/443 (81%), Gaps = 2/443 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || |||||||||||||| ||||| ||| || Sbjct: 497 gatgcagatcttcgtgaagaccctgactggtaagaccatcaccctcgaggtggagcccag 556 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| |||||||| || ||||| ||||| || || || || Sbjct: 557 tgacaccatcgagaatgtcaaggcaaagatccaagataaggaaggcattcctcctgatca 616 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| || || ||||| || || || || ||||| |||||||||| Sbjct: 617 gcagaggttgatctttgccggaaaacagctggaagatggtcgtaccctgtctgactacaa 676 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||| | |||||||| ||||| ||||| ||||| ||||| ||||| Sbjct: 677 catccagaaagagtccaccttgcacctggtactccgtctcagaggtgggatgcaaatctt 736 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||| ||||| ||||||||||||||||| |||| ||| | ||||| ||||| Sbjct: 737 cgtgaagacactcactggcaagaccatcacccttgaggtcgagcccagtgacactatcga 796 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 |||||||| || |||||||| |||||||| |||||||| || ||||||||| || | | Sbjct: 797 gaacgtcaaagcaaagatccaagacaaggaaggcattcctcctgaccagcagagg-ttga 855 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | || |||||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 856 tctttgcc-ggaaagcagctggaagatgggcgcaccctgtctgactacaacatccagaaa 914 Query: 660 gggtcacccctgcccctggngct 682 | ||| |||||| ||||| ||| Sbjct: 915 gagtctaccctgcacctggtgct 937 Score = 214 bits (108), Expect = 4e-52 Identities = 291/352 (82%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || ||||||||||| || || || ||| | Sbjct: 1409 gatgcagatcttcgtgaagaccctgactggtaagaccatcactctcgaagtggagccgag 1468 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| |||||||| |||||||| |||||||| || ||||| Sbjct: 1469 tgacaccattgagaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgacca 1528 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | ||||||||||| || ||||| || || || |||||||| |||||||||| Sbjct: 1529 gcagaggttgatctttgctgggaaacagctggaagatggacgcaccctgtctgactacaa 1588 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||||||||| || || ||||| ||||||||||| Sbjct: 1589 catccagaaagagtccaccctgcacctggtgctccgtcttagaggtgggatgcagatctt 1648 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || || ||||||||||| || || | ||| | |||||||| || Sbjct: 1649 cgtgaagaccctgactggtaagaccatcactctcgaagtggagccgagtgacaccattga 1708 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || |||||||| |||||||| |||||||| ||||| || || ||||||||| Sbjct: 1709 gaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgaccagcag 1760 Score = 214 bits (108), Expect = 4e-52 Identities = 291/352 (82%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || ||||||||||| || ||||| ||| | Sbjct: 1181 gatgcagatcttcgtgaagaccctgactggtaagaccatcactctcgaggtggagccgag 1240 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| |||||||| |||||||| |||||||| || || || Sbjct: 1241 tgacaccattgagaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgatca 1300 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | ||||||||||| || ||||| || || || |||||||| |||||||||| Sbjct: 1301 gcagaggttgatctttgctgggaaacagctggaagatggacgcaccctgtctgactacaa 1360 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||||||||| || || ||||| ||||||||||| Sbjct: 1361 catccagaaagagtccaccctgcacctggtgctccgtcttagaggtgggatgcagatctt 1420 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || || ||||||||||| || || | ||| | |||||||| || Sbjct: 1421 cgtgaagaccctgactggtaagaccatcactctcgaagtggagccgagtgacaccattga 1480 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || |||||||| |||||||| |||||||| ||||| || || ||||||||| Sbjct: 1481 gaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgaccagcag 1532 Score = 206 bits (104), Expect = 9e-50 Identities = 278/336 (82%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || |||||||||||||| || || ||| | Sbjct: 953 gatgcagatcttcgtgaagaccctgactggtaagaccatcaccctcgaagtggagccgag 1012 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| |||||||| |||||||| |||||||| || ||||| Sbjct: 1013 tgacaccattgagaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgacca 1072 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| || || ||||| || || || || ||||| |||||||||| Sbjct: 1073 gcagaggttgatctttgccggaaaacagctggaagatggtcgtaccctgtctgactacaa 1132 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||| | |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 1133 catccagaaagagtccaccttgcacctggtgctccgtctcagaggtgggatgcagatctt 1192 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || || ||||||||||| || |||| ||| | |||||||| || Sbjct: 1193 cgtgaagaccctgactggtaagaccatcactctcgaggtggagccgagtgacaccattga 1252 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcat 575 || |||||||| |||||||| |||||||| ||||| Sbjct: 1253 gaatgtcaaggcaaagatccaagacaaggaaggcat 1288 Score = 139 bits (70), Expect = 2e-29 Identities = 166/198 (83%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || |||||||||||||| ||||| ||| || Sbjct: 1865 gatgcagatcttcgtgaagaccctgactggtaagaccatcaccctcgaggtggagcccag 1924 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| |||||||| || ||||| |||||||| || || || Sbjct: 1925 tgacaccatcgagaatgtcaaggcaaagatccaagataaggaaggcatccctcctgatca 1984 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | ||||||||||| || ||||| || || || |||||||| |||||||||| Sbjct: 1985 gcagaggttgatctttgctgggaaacagctggaagatggacgcaccctgtctgactacaa 2044 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2045 catccagaaagagtccac 2062 Score = 42.1 bits (21), Expect = 2.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 724 ctcactggcaagaacatcacccttg 748 ||||||||||||| ||||||||||| Sbjct: 747 ctcactggcaagaccatcacccttg 771 Score = 42.1 bits (21), Expect = 2.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 724 ctcactggcaagaacatcacccttg 748 ||||||||||||| ||||||||||| Sbjct: 291 ctcactggcaagaccatcacccttg 315
>gb|BC039193.1| Homo sapiens ubiquitin C, mRNA (cDNA clone MGC:14624 IMAGE:4076286), complete cds Length = 2222 Score = 299 bits (151), Expect = 8e-78 Identities = 370/442 (83%), Gaps = 2/442 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||| || || || |||||||||||||| ||||||||| || | Sbjct: 69 atgcagatcttcgtgaagactctgactggtaagaccatcaccctcgaggttgagcccagt 128 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || |||||||| |||||||| || ||||| |||||||| || |||||| Sbjct: 129 gacaccatcgagaatgtcaaggcaaagatccaagataaggaaggcatccctcctgaccag 188 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||| || ||||| || || || |||||||| ||||||||||| Sbjct: 189 cagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgactacaac 248 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||||||||| ||||| ||||| ||||| |||||| Sbjct: 249 atccagaaagagtccaccctgcacctggtgctccgtctcagaggtgggatgcaaatcttc 308 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| ||||| ||||||||||||||||| |||| ||| | ||||||||||| Sbjct: 309 gtgaagacactcactggcaagaccatcacccttgaggtggagcccagtgacaccatcgag 368 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 |||||||| || ||||||||||||||||| |||||||| || ||||||||| || | || Sbjct: 369 aacgtcaaagcaaagatccaggacaaggaaggcattcctcctgaccagcagagg-ttgat 427 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | || |||||||| || ||||| || ||||| ||| ||||||||||||||| | Sbjct: 428 ctttgcc-ggaaagcagctggaagatgggcgcaccctgtctgactacaacatccagaaag 486 Query: 661 ggtcacccctgcccctggngct 682 ||| |||||| ||||| ||| Sbjct: 487 agtctaccctgcacctggtgct 508 Score = 270 bits (136), Expect = 7e-69 Identities = 298/352 (84%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||| ||||| |||||||| ||||| ||||||||||||||||||||||| ||| || Sbjct: 296 gatgcaaatcttcgtgaagacactcactggcaagaccatcacccttgaggtggagcccag 355 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| |||||||| || ||||||||||||||||| ||||| || || ||||| Sbjct: 356 tgacaccatcgagaacgtcaaagcaaagatccaggacaaggaaggcattcctcctgacca 415 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| || |||||||| || || || |||||||| |||||||||| Sbjct: 416 gcagaggttgatctttgccggaaagcagctggaagatgggcgcaccctgtctgactacaa 475 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 476 catccagaaagagtctaccctgcacctggtgctccgtctcagaggtgggatgcagatctt 535 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || || |||||||||||||| |||| ||| | ||||||||||| Sbjct: 536 cgtgaagaccctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcga 595 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || |||||||| |||||||| || ||||| |||||||| || || |||||| Sbjct: 596 gaatgtcaaggcaaagatccaagataaggaaggcattcctcctgatcagcag 647 Score = 254 bits (128), Expect = 4e-64 Identities = 296/352 (84%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||| ||||| |||||||| ||||| ||||||||||||||||||||||| ||| || Sbjct: 752 gatgcaaatcttcgtgaagacactcactggcaagaccatcacccttgaggtcgagcccag 811 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| |||||||| || |||||||| |||||||| ||||| || || ||||| Sbjct: 812 tgacactatcgagaacgtcaaagcaaagatccaagacaaggaaggcattcctcctgacca 871 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| || |||||||| || || || |||||||| |||||||||| Sbjct: 872 gcagaggttgatctttgccggaaagcagctggaagatgggcgcaccctgtctgactacaa 931 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 932 catccagaaagagtctaccctgcacctggtgctccgtctcagaggtgggatgcagatctt 991 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || || |||||||||||||| || | ||| | |||||||| || Sbjct: 992 cgtgaagaccctgactggtaagaccatcaccctcgaagtggagccgagtgacaccattga 1051 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || |||||||| |||||||| |||||||| ||||| || || ||||||||| Sbjct: 1052 gaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgaccagcag 1103 Score = 230 bits (116), Expect = 6e-57 Identities = 281/336 (83%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || ||||||||||| || || || ||| | Sbjct: 1664 gatgcagatcttcgtgaagaccctgactggtaagaccatcactctcgaagtggagccgag 1723 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| |||||||| |||||||| |||||||| || ||||| Sbjct: 1724 tgacaccattgagaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgacca 1783 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | ||||||||||| || ||||| || || || |||||||| |||||||||| Sbjct: 1784 gcagaggttgatctttgctgggaaacagctggaagatggacgcaccctgtctgactacaa 1843 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 1844 catccagaaagagtccaccctgcacctggtgctccgtctcagaggtgggatgcagatctt 1903 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || || |||||||||||||| |||| ||| | ||||||||||| Sbjct: 1904 cgtgaagaccctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcga 1963 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcat 575 || |||||||| |||||||| || ||||| ||||| Sbjct: 1964 gaatgtcaaggcaaagatccaagataaggaaggcat 1999 Score = 230 bits (116), Expect = 6e-57 Identities = 362/443 (81%), Gaps = 2/443 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || |||||||||||||| ||||| ||| || Sbjct: 524 gatgcagatcttcgtgaagaccctgactggtaagaccatcaccctcgaggtggagcccag 583 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| |||||||| || ||||| ||||| || || || || Sbjct: 584 tgacaccatcgagaatgtcaaggcaaagatccaagataaggaaggcattcctcctgatca 643 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| || || ||||| || || || || ||||| |||||||||| Sbjct: 644 gcagaggttgatctttgccggaaaacagctggaagatggtcgtaccctgtctgactacaa 703 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||| | |||||||| ||||| ||||| ||||| ||||| ||||| Sbjct: 704 catccagaaagagtccaccttgcacctggtactccgtctcagaggtgggatgcaaatctt 763 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||| ||||| ||||||||||||||||| |||| ||| | ||||| ||||| Sbjct: 764 cgtgaagacactcactggcaagaccatcacccttgaggtcgagcccagtgacactatcga 823 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 |||||||| || |||||||| |||||||| |||||||| || ||||||||| || | | Sbjct: 824 gaacgtcaaagcaaagatccaagacaaggaaggcattcctcctgaccagcagagg-ttga 882 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | || |||||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 883 tctttgcc-ggaaagcagctggaagatgggcgcaccctgtctgactacaacatccagaaa 941 Query: 660 gggtcacccctgcccctggngct 682 | ||| |||||| ||||| ||| Sbjct: 942 gagtctaccctgcacctggtgct 964 Score = 214 bits (108), Expect = 4e-52 Identities = 291/352 (82%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || ||||||||||| || || || ||| | Sbjct: 1436 gatgcagatcttcgtgaagaccctgactggtaagaccatcactctcgaagtggagccgag 1495 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| |||||||| |||||||| |||||||| || ||||| Sbjct: 1496 tgacaccattgagaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgacca 1555 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | ||||||||||| || ||||| || || || |||||||| |||||||||| Sbjct: 1556 gcagaggttgatctttgctgggaaacagctggaagatggacgcaccctgtctgactacaa 1615 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||||||||| || || ||||| ||||||||||| Sbjct: 1616 catccagaaagagtccaccctgcacctggtgctccgtcttagaggtgggatgcagatctt 1675 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || || ||||||||||| || || | ||| | |||||||| || Sbjct: 1676 cgtgaagaccctgactggtaagaccatcactctcgaagtggagccgagtgacaccattga 1735 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || |||||||| |||||||| |||||||| ||||| || || ||||||||| Sbjct: 1736 gaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgaccagcag 1787 Score = 214 bits (108), Expect = 4e-52 Identities = 291/352 (82%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || ||||||||||| || ||||| ||| | Sbjct: 1208 gatgcagatcttcgtgaagaccctgactggtaagaccatcactctcgaggtggagccgag 1267 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| |||||||| |||||||| |||||||| || || || Sbjct: 1268 tgacaccattgagaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgatca 1327 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | ||||||||||| || ||||| || || || |||||||| |||||||||| Sbjct: 1328 gcagaggttgatctttgctgggaaacagctggaagatggacgcaccctgtctgactacaa 1387 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||||||||| || || ||||| ||||||||||| Sbjct: 1388 catccagaaagagtccaccctgcacctggtgctccgtcttagaggtgggatgcagatctt 1447 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || || ||||||||||| || || | ||| | |||||||| || Sbjct: 1448 cgtgaagaccctgactggtaagaccatcactctcgaagtggagccgagtgacaccattga 1507 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || |||||||| |||||||| |||||||| ||||| || || ||||||||| Sbjct: 1508 gaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgaccagcag 1559 Score = 206 bits (104), Expect = 9e-50 Identities = 278/336 (82%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || |||||||||||||| || || ||| | Sbjct: 980 gatgcagatcttcgtgaagaccctgactggtaagaccatcaccctcgaagtggagccgag 1039 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| |||||||| |||||||| |||||||| || ||||| Sbjct: 1040 tgacaccattgagaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgacca 1099 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| || || ||||| || || || || ||||| |||||||||| Sbjct: 1100 gcagaggttgatctttgccggaaaacagctggaagatggtcgtaccctgtctgactacaa 1159 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||| | |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 1160 catccagaaagagtccaccttgcacctggtgctccgtctcagaggtgggatgcagatctt 1219 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || || ||||||||||| || |||| ||| | |||||||| || Sbjct: 1220 cgtgaagaccctgactggtaagaccatcactctcgaggtggagccgagtgacaccattga 1279 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcat 575 || |||||||| |||||||| |||||||| ||||| Sbjct: 1280 gaatgtcaaggcaaagatccaagacaaggaaggcat 1315 Score = 139 bits (70), Expect = 2e-29 Identities = 166/198 (83%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || |||||||||||||| ||||| ||| || Sbjct: 1892 gatgcagatcttcgtgaagaccctgactggtaagaccatcaccctcgaggtggagcccag 1951 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| |||||||| || ||||| |||||||| || || || Sbjct: 1952 tgacaccatcgagaatgtcaaggcaaagatccaagataaggaaggcatccctcctgatca 2011 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | ||||||||||| || ||||| || || || |||||||| |||||||||| Sbjct: 2012 gcagaggttgatctttgctgggaaacagctggaagatggacgcaccctgtctgactacaa 2071 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2072 catccagaaagagtccac 2089 Score = 42.1 bits (21), Expect = 2.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 724 ctcactggcaagaacatcacccttg 748 ||||||||||||| ||||||||||| Sbjct: 774 ctcactggcaagaccatcacccttg 798 Score = 42.1 bits (21), Expect = 2.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 724 ctcactggcaagaacatcacccttg 748 ||||||||||||| ||||||||||| Sbjct: 318 ctcactggcaagaccatcacccttg 342
>gb|AY522603.1| Oreochromis mossambicus ubiquitin precursor-like mRNA, partial sequence Length = 745 Score = 299 bits (151), Expect = 8e-78 Identities = 354/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||||||||| |||||||| ||||||||||||||||| || |||| | | | Sbjct: 68 atgcagatctttgtgaaaaccctcactggcaagaccatcaccctggaagttgggccaagt 127 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || |||||||| || |||||||| ||||||||||| ||||| |||||| Sbjct: 128 gacaccatcgagaatgtcaaggccaaaatccaggataaggagggcattccccctgaccag 187 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| || || ||||||||||||||||| || || ||||||||||| | |||||||| Sbjct: 188 cagatgctgatatttgctggcaagcagctggaagatggccgcaccctctccgactacaat 247 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||| ||||| || || || ||||||||||| |||||||||||| Sbjct: 248 atccagaaggagtccacccttcaccttgttctgcgtctcaggggtggcatgcagatcttc 307 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 ||||| |||||||| |||||||||||||||||||||| |||| | |||||||| || Sbjct: 308 gtgaaaaccctcactggcaagaccatcaccctggaggttgagccaagtgacaccattgag 367 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 || |||||||| || |||||||| ||||| |||||||||| ||||||||| || || || Sbjct: 368 aatgtcaaggccaaaatccaggataaggaaagcattccccctgaccagcagagg-ctgat 426 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | ||||||||||| || |||||||| ||||| | | ||||||||| ||||||| Sbjct: 427 ctttg-ctggcaagcagctggaagatggccgcaccctctcggactacaacatgcagaagg 485 Score = 274 bits (138), Expect = 4e-70 Identities = 298/350 (85%), Gaps = 1/350 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||| | | Sbjct: 296 atgcagatcttcgtgaaaaccctcactggcaagaccatcaccctggaggttgagccaagt 355 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || || |||||||| || |||||||| ||||| |||| ||||| |||||| Sbjct: 356 gacaccattgagaatgtcaaggccaaaatccaggataaggaaagcattccccctgaccag 415 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || |||||||||||||||||||| || || ||||||||||| | ||||||||| Sbjct: 416 cagaggctgatctttgctggcaagcagctggaagatggccgcaccctctcggactacaac 475 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 || ||||||||||||||||||||||| || || || || |||||||| |||||||||||| Sbjct: 476 atgcagaaggagtccaccctccaccttgtcctgcgtctgaggggtggcatgcagatcttc 535 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||||||||| ||||||||||||||||||| |||||| | ||||||||||| Sbjct: 536 gtgaagaccctcactggcaagaccatcaccctgggaggtgagccaagtgacaccatcgag 595 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagca 590 || |||||||| || ||||| || |||| ||||||||||| |||||||| Sbjct: 596 aatgtcaaggccaaaatccaaga-taggaaggcattccccctgaccagca 644 Score = 105 bits (53), Expect = 2e-19 Identities = 173/209 (82%), Gaps = 3/209 (1%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||||||||| ||||||||||||||||| | | |||| | | Sbjct: 524 atgcagatcttcgtgaagaccctcactggcaagaccatcaccctgggaggtgagccaagt 583 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || |||||||| || ||||| || | ||| ||||| ||||| |||||| Sbjct: 584 gacaccatcgagaatgtcaaggccaaaatccaagata-ggaaggcattccccctgaccag 642 Query: 361 cagcgcctcatctttgctggcaag-cagcttgaggacggccgcacccttgctgactacaa 419 || | || ||||||||||||||| |||| | || ||||| ||||| | |||||||| Sbjct: 643 cataggctgatctttgctggcaaggcagcggggagatggccgtaccctctccgactacaa 702 Query: 420 catccagaaggagtccaccctccacctgg 448 |||||||| |||||||||||||||||||| Sbjct: 703 catccaga-ggagtccaccctccacctgg 730 Score = 44.1 bits (22), Expect = 0.73 Identities = 25/26 (96%) Strand = Plus / Plus Query: 721 accctcactggcaagaacatcaccct 746 |||||||||||||||| ||||||||| Sbjct: 542 accctcactggcaagaccatcaccct 567 Score = 44.1 bits (22), Expect = 0.73 Identities = 25/26 (96%) Strand = Plus / Plus Query: 721 accctcactggcaagaacatcaccct 746 |||||||||||||||| ||||||||| Sbjct: 314 accctcactggcaagaccatcaccct 339 Score = 44.1 bits (22), Expect = 0.73 Identities = 25/26 (96%) Strand = Plus / Plus Query: 721 accctcactggcaagaacatcaccct 746 |||||||||||||||| ||||||||| Sbjct: 86 accctcactggcaagaccatcaccct 111
>gb|BC000449.2| Homo sapiens ubiquitin C, mRNA (cDNA clone IMAGE:2821375), partial cds Length = 2201 Score = 299 bits (151), Expect = 8e-78 Identities = 370/442 (83%), Gaps = 2/442 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| |||||||| || || || |||||||||||||| ||||||||| || | Sbjct: 54 atgcagatcttcgtgaagactctgactggtaagaccatcaccctcgaggttgagcccagt 113 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| ||||| || |||||||| |||||||| || ||||| |||||||| || |||||| Sbjct: 114 gacaccatcgagaatgtcaaggcaaagatccaagataaggaaggcatccctcctgaccag 173 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||| || ||||| || || || |||||||| ||||||||||| Sbjct: 174 cagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgactacaac 233 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||| |||||||||||||| ||||| ||||| ||||| |||||| Sbjct: 234 atccagaaagagtccaccctgcacctggtgctccgtctcagaggtgggatgcaaatcttc 293 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 |||||||| ||||| ||||||||||||||||| |||| ||| | ||||||||||| Sbjct: 294 gtgaagacactcactggcaagaccatcacccttgaggtggagcccagtgacaccatcgag 353 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 |||||||| || ||||||||||||||||| |||||||| || ||||||||| || | || Sbjct: 354 aacgtcaaagcaaagatccaggacaaggaaggcattcctcctgaccagcagagg-ttgat 412 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | || |||||||| || ||||| || ||||| ||| ||||||||||||||| | Sbjct: 413 ctttgcc-ggaaagcagctggaagatgggcgcaccctgtctgactacaacatccagaaag 471 Query: 661 ggtcacccctgcccctggngct 682 ||| |||||| ||||| ||| Sbjct: 472 agtctaccctgcacctggtgct 493 Score = 270 bits (136), Expect = 7e-69 Identities = 298/352 (84%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||| ||||| |||||||| ||||| ||||||||||||||||||||||| ||| || Sbjct: 281 gatgcaaatcttcgtgaagacactcactggcaagaccatcacccttgaggtggagcccag 340 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| |||||||| || ||||||||||||||||| ||||| || || ||||| Sbjct: 341 tgacaccatcgagaacgtcaaagcaaagatccaggacaaggaaggcattcctcctgacca 400 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| || |||||||| || || || |||||||| |||||||||| Sbjct: 401 gcagaggttgatctttgccggaaagcagctggaagatgggcgcaccctgtctgactacaa 460 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 461 catccagaaagagtctaccctgcacctggtgctccgtctcagaggtgggatgcagatctt 520 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || || |||||||||||||| |||| ||| | ||||||||||| Sbjct: 521 cgtgaagaccctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcga 580 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || |||||||| |||||||| || ||||| |||||||| || || |||||| Sbjct: 581 gaatgtcaaggcaaagatccaagataaggaaggcattcctcctgatcagcag 632 Score = 254 bits (128), Expect = 4e-64 Identities = 296/352 (84%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||| ||||| |||||||| ||||| ||||||||||||||||||||||| ||| || Sbjct: 737 gatgcaaatcttcgtgaagacactcactggcaagaccatcacccttgaggtcgagcccag 796 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| |||||||| || |||||||| |||||||| ||||| || || ||||| Sbjct: 797 tgacactatcgagaacgtcaaagcaaagatccaagacaaggaaggcattcctcctgacca 856 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| || |||||||| || || || |||||||| |||||||||| Sbjct: 857 gcagaggttgatctttgccggaaagcagctggaagatgggcgcaccctgtctgactacaa 916 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 917 catccagaaagagtctaccctgcacctggtgctccgtctcagaggtgggatgcagatctt 976 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || || |||||||||||||| || | ||| | |||||||| || Sbjct: 977 cgtgaagaccctgactggtaagaccatcaccctcgaagtggagccgagtgacaccattga 1036 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || |||||||| |||||||| |||||||| ||||| || || ||||||||| Sbjct: 1037 gaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgaccagcag 1088 Score = 230 bits (116), Expect = 6e-57 Identities = 281/336 (83%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || ||||||||||| || || || ||| | Sbjct: 1649 gatgcagatcttcgtgaagaccctgactggtaagaccatcactctcgaagtggagccgag 1708 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| |||||||| |||||||| |||||||| || ||||| Sbjct: 1709 tgacaccattgagaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgacca 1768 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | ||||||||||| || ||||| || || || |||||||| |||||||||| Sbjct: 1769 gcagaggttgatctttgctgggaaacagctggaagatggacgcaccctgtctgactacaa 1828 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 1829 catccagaaagagtccaccctgcacctggtgctccgtctcagaggtgggatgcagatctt 1888 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || || |||||||||||||| |||| ||| | ||||||||||| Sbjct: 1889 cgtgaagaccctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcga 1948 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcat 575 || |||||||| |||||||| || ||||| ||||| Sbjct: 1949 gaatgtcaaggcaaagatccaagataaggaaggcat 1984 Score = 230 bits (116), Expect = 6e-57 Identities = 362/443 (81%), Gaps = 2/443 (0%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || |||||||||||||| ||||| ||| || Sbjct: 509 gatgcagatcttcgtgaagaccctgactggtaagaccatcaccctcgaggtggagcccag 568 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| |||||||| || ||||| ||||| || || || || Sbjct: 569 tgacaccatcgagaatgtcaaggcaaagatccaagataaggaaggcattcctcctgatca 628 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| || || ||||| || || || || ||||| |||||||||| Sbjct: 629 gcagaggttgatctttgccggaaaacagctggaagatggtcgtaccctgtctgactacaa 688 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||| | |||||||| ||||| ||||| ||||| ||||| ||||| Sbjct: 689 catccagaaagagtccaccttgcacctggtactccgtctcagaggtgggatgcaaatctt 748 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 ||||||||| ||||| ||||||||||||||||| |||| ||| | ||||| ||||| Sbjct: 749 cgtgaagacactcactggcaagaccatcacccttgaggtcgagcccagtgacactatcga 808 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctca 599 |||||||| || |||||||| |||||||| |||||||| || ||||||||| || | | Sbjct: 809 gaacgtcaaagcaaagatccaagacaaggaaggcattcctcctgaccagcagagg-ttga 867 Query: 600 tntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaag 659 | |||| | || |||||||| || ||||| || ||||| ||| ||||||||||||||| Sbjct: 868 tctttgcc-ggaaagcagctggaagatgggcgcaccctgtctgactacaacatccagaaa 926 Query: 660 gggtcacccctgcccctggngct 682 | ||| |||||| ||||| ||| Sbjct: 927 gagtctaccctgcacctggtgct 949 Score = 214 bits (108), Expect = 4e-52 Identities = 291/352 (82%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || ||||||||||| || || || ||| | Sbjct: 1421 gatgcagatcttcgtgaagaccctgactggtaagaccatcactctcgaagtggagccgag 1480 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| |||||||| |||||||| |||||||| || ||||| Sbjct: 1481 tgacaccattgagaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgacca 1540 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | ||||||||||| || ||||| || || || |||||||| |||||||||| Sbjct: 1541 gcagaggttgatctttgctgggaaacagctggaagatggacgcaccctgtctgactacaa 1600 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||||||||| || || ||||| ||||||||||| Sbjct: 1601 catccagaaagagtccaccctgcacctggtgctccgtcttagaggtgggatgcagatctt 1660 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || || ||||||||||| || || | ||| | |||||||| || Sbjct: 1661 cgtgaagaccctgactggtaagaccatcactctcgaagtggagccgagtgacaccattga 1720 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || |||||||| |||||||| |||||||| ||||| || || ||||||||| Sbjct: 1721 gaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgaccagcag 1772 Score = 214 bits (108), Expect = 4e-52 Identities = 291/352 (82%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || ||||||||||| || ||||| ||| | Sbjct: 1193 gatgcagatcttcgtgaagaccctgactggtaagaccatcactctcgaggtggagccgag 1252 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| |||||||| |||||||| |||||||| || || || Sbjct: 1253 tgacaccattgagaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgatca 1312 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | ||||||||||| || ||||| || || || |||||||| |||||||||| Sbjct: 1313 gcagaggttgatctttgctgggaaacagctggaagatggacgcaccctgtctgactacaa 1372 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||||| |||||||||||||| || || ||||| ||||||||||| Sbjct: 1373 catccagaaagagtccaccctgcacctggtgctccgtcttagaggtgggatgcagatctt 1432 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || || ||||||||||| || || | ||| | |||||||| || Sbjct: 1433 cgtgaagaccctgactggtaagaccatcactctcgaagtggagccgagtgacaccattga 1492 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcag 591 || |||||||| |||||||| |||||||| ||||| || || ||||||||| Sbjct: 1493 gaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgaccagcag 1544 Score = 206 bits (104), Expect = 9e-50 Identities = 278/336 (82%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || |||||||||||||| || || ||| | Sbjct: 965 gatgcagatcttcgtgaagaccctgactggtaagaccatcaccctcgaagtggagccgag 1024 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| || || || |||||||| |||||||| |||||||| |||||||| || ||||| Sbjct: 1025 tgacaccattgagaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgacca 1084 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | |||||||| || || ||||| || || || || ||||| |||||||||| Sbjct: 1085 gcagaggttgatctttgccggaaaacagctggaagatggtcgtaccctgtctgactacaa 1144 Query: 420 catccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatctt 479 ||||||||| ||||||||| | |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 1145 catccagaaagagtccaccttgcacctggtgctccgtctcagaggtgggatgcagatctt 1204 Query: 480 cgtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcga 539 |||||||||||| || || ||||||||||| || |||| ||| | |||||||| || Sbjct: 1205 cgtgaagaccctgactggtaagaccatcactctcgaggtggagccgagtgacaccattga 1264 Query: 540 caacgtcaaggcgaagatccaggacaaggagggcat 575 || |||||||| |||||||| |||||||| ||||| Sbjct: 1265 gaatgtcaaggcaaagatccaagacaaggaaggcat 1300 Score = 139 bits (70), Expect = 2e-29 Identities = 166/198 (83%) Strand = Plus / Plus Query: 240 gatgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctc 299 |||||||||||| ||||||||||| || || |||||||||||||| ||||| ||| || Sbjct: 1877 gatgcagatcttcgtgaagaccctgactggtaagaccatcaccctcgaggtggagcccag 1936 Query: 300 tgacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggacca 359 |||||| ||||| || |||||||| |||||||| || ||||| |||||||| || || || Sbjct: 1937 tgacaccatcgagaatgtcaaggcaaagatccaagataaggaaggcatccctcctgatca 1996 Query: 360 gcagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaa 419 |||| | | ||||||||||| || ||||| || || || |||||||| |||||||||| Sbjct: 1997 gcagaggttgatctttgctgggaaacagctggaagatggacgcaccctgtctgactacaa 2056 Query: 420 catccagaaggagtccac 437 ||||||||| |||||||| Sbjct: 2057 catccagaaagagtccac 2074 Score = 42.1 bits (21), Expect = 2.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 724 ctcactggcaagaacatcacccttg 748 ||||||||||||| ||||||||||| Sbjct: 759 ctcactggcaagaccatcacccttg 783 Score = 42.1 bits (21), Expect = 2.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 724 ctcactggcaagaacatcacccttg 748 ||||||||||||| ||||||||||| Sbjct: 303 ctcactggcaagaccatcacccttg 327
>emb|CR732158.2|CNS0GRVN Tetraodon nigroviridis full-length cDNA Length = 800 Score = 299 bits (151), Expect = 8e-78 Identities = 354/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 230 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 289 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| || |||||||||||||| ||||| ||||| || ||| Sbjct: 290 gacaccattgagaacgtgaaggccaaaatccaggacaaggaaggcattccccctgatcag 349 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 350 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctctccgactacaac 409 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||||||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 410 atccagaaggagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 469 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 470 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 529 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||| || || || Sbjct: 530 aacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 588 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| |||||||| ||||| | | |||||||| |||||||| Sbjct: 589 ctttg-ctggcaagcagcttgaagatggccgcaccctgtccgactacaacacccagaagg 647 Score = 299 bits (151), Expect = 8e-78 Identities = 354/420 (84%), Gaps = 2/420 (0%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 2 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 61 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 62 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 121 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 122 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctctccgactacaac 181 Query: 421 atccagaaggagtccaccctccacctggtgctccgcctcaggggtggtatgcagatcttc 480 |||||||| ||||||||||||||||| || || || || ||||| || |||||||||||| Sbjct: 182 atccagaaagagtccaccctccaccttgtcctgcgtctgaggggaggcatgcagatcttc 241 Query: 481 gtgaagaccctcaccggcaagaccatcaccctggagggtgagtcttcggacaccatcgac 540 || ||||||||||| ||||| ||||||||||| |||| ||| | |||||||| || Sbjct: 242 gtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgag 301 Query: 541 aacgtcaaggcgaagatccaggacaaggagggcattcccccggaccagcagcggcctcat 600 ||||| ||||| || |||||||||||||| ||||||||||| || |||||| || || || Sbjct: 302 aacgtgaaggccaaaatccaggacaaggaaggcattccccctgatcagcagagg-ctgat 360 Query: 601 ntttgncgggcaagcagcttgangatggccgaacccttgctgnctacaacatccagaagg 660 |||| | |||||||||||||| |||||||| ||||| | | ||||||||||||||||| Sbjct: 361 ctttg-ctggcaagcagcttgaagatggccgcaccctctccgactacaacatccagaagg 419 Score = 186 bits (94), Expect = 8e-44 Identities = 178/206 (86%) Strand = Plus / Plus Query: 241 atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggttgagtcctct 300 ||||||||||| || ||||||||||| ||||| ||||||||||| ||||| ||| || Sbjct: 458 atgcagatcttcgtcaagaccctcactggcaaaaccatcaccctcgaggtggagcccagc 517 Query: 301 gacacgatcgacaacgtcaaggcgaagatccaggacaaggagggcatccccccggaccag 360 ||||| || || ||||| ||||| ||||||||||||||||| ||||| ||||| || ||| Sbjct: 518 gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcag 577 Query: 361 cagcgcctcatctttgctggcaagcagcttgaggacggccgcacccttgctgactacaac 420 ||| | || ||||||||||||||||||||||| || ||||||||||| | ||||||||| Sbjct: 578 cagaggctgatctttgctggcaagcagcttgaagatggccgcaccctgtccgactacaac 637 Query: 421 atccagaaggagtccaccctccacct 446 | |||||||||||||||||||||||| Sbjct: 638 acccagaaggagtccaccctccacct 663 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,348,180 Number of Sequences: 3902068 Number of extensions: 5348180 Number of successful extensions: 123356 Number of sequences better than 10.0: 2444 Number of HSP's better than 10.0 without gapping: 2436 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 104631 Number of HSP's gapped (non-prelim): 14352 length of query: 831 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 808 effective length of database: 17,143,297,704 effective search space: 13851784544832 effective search space used: 13851784544832 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)
