ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd27n03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 611 bits (308), Expect = e-172 Identities = 317/319 (99%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 120050 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 119992 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119991 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 119932 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119931 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 119872 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119871 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 119812 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119811 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 119752 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 119751 tgccgcaccctagatggct 119733 Score = 611 bits (308), Expect = e-172 Identities = 317/319 (99%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 94844 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 94902 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94903 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 94962 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94963 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95022 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95023 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 95082 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95083 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 95142 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 95143 tgccgcaccctagatggct 95161
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 603 bits (304), Expect = e-169 Identities = 316/319 (99%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 961 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 903 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 902 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 843 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 842 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 783 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 723 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 663 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 662 tgccgcaccctagatggct 644
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 603 bits (304), Expect = e-169 Identities = 316/319 (99%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 44875 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 44817 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 44816 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 44757 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44756 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 44697 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44696 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 44637 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44636 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 44577 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 44576 tgccgcaccctagatggct 44558 Score = 603 bits (304), Expect = e-169 Identities = 316/319 (99%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 20243 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 20301 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 20302 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 20361 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20362 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 20421 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20422 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 20481 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20482 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 20541 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 20542 tgccgcaccctagatggct 20560
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 603 bits (304), Expect = e-169 Identities = 316/319 (99%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 1504 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 1446 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1445 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 1386 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1385 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 1326 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1325 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 1266 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1265 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 1206 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 1205 tgccgcaccctagatggct 1187
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 603 bits (304), Expect = e-169 Identities = 316/319 (99%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 123714 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 123656 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123655 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 123596 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123595 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 123536 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123535 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 123476 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123475 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 123416 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 123415 tgccgcaccctagatggct 123397 Score = 603 bits (304), Expect = e-169 Identities = 316/319 (99%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 99123 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 99181 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 99182 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 99241 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99242 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 99301 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99302 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 99361 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99362 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 99421 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 99422 tgccgcaccctagatggct 99440
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 603 bits (304), Expect = e-169 Identities = 316/319 (99%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 124431 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 124373 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 124372 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 124313 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124312 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 124253 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124252 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 124193 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124192 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 124133 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 124132 tgccgcaccctagatggct 124114 Score = 603 bits (304), Expect = e-169 Identities = 316/319 (99%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 99800 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 99858 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 99859 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 99918 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99919 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 99978 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99979 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 100038 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100039 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 100098 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 100099 tgccgcaccctagatggct 100117
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 118831 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 118773 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 118772 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 118713 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118712 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 118653 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118652 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 118593 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118592 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 118533 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 118532 tgccgcaccctagatggct 118514
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 119915 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 119857 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119856 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 119797 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119796 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 119737 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119736 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 119677 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119676 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 119617 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 119616 tgccgcaccctagatggct 119598 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 95241 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 95299 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95300 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 95359 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95360 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95419 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95420 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 95479 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95480 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 95539 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 95540 tgccgcaccctagatggct 95558
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 119915 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 119857 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119856 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 119797 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119796 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 119737 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119736 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 119677 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119676 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 119617 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 119616 tgccgcaccctagatggct 119598 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 95241 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 95299 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95300 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 95359 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95360 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95419 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95420 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 95479 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95480 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 95539 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 95540 tgccgcaccctagatggct 95558
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 119864 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 119806 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119805 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 119746 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119745 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 119686 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119685 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 119626 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119625 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 119566 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 119565 tgccgcaccctagatggct 119547 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 95186 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 95244 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95245 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 95304 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95305 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95364 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95365 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 95424 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95425 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 95484 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 95485 tgccgcaccctagatggct 95503
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 31507819 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 31507877 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 31507878 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 31507937 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507938 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 31507997 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507998 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 31508057 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508058 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 31508117 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 31508118 tgccgcaccctagatggct 31508136
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 84777 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 84719 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 84718 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 84659 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84658 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 84599 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84598 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 84539 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84538 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 84479 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 84478 tgccgcaccctagatggct 84460
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 119884 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 119826 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119825 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 119766 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119765 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 119706 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119705 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 119646 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119645 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 119586 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 119585 tgccgcaccctagatggct 119567 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 95234 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 95292 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95293 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 95352 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95353 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95412 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95413 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 95472 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95473 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 95532 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 95533 tgccgcaccctagatggct 95551
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 122283 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 122341 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 122342 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 122401 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122402 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 122461 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122462 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 122521 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122522 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 122581 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 122582 tgccgcaccctagatggct 122600 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 14008 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 14066 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 14067 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 14126 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14127 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 14186 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14187 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 14246 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14247 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 14306 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 14307 tgccgcaccctagatggct 14325
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 140816 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 140874 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 140875 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 140934 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140935 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 140994 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140995 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 141054 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141055 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 141114 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 141115 tgccgcaccctagatggct 141133
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 93412 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 93470 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 93471 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 93530 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93531 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 93590 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93591 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 93650 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93651 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 93710 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 93711 tgccgcaccctagatggct 93729
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 58603 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 58545 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 58544 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 58485 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58484 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 58425 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58424 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 58365 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58364 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 58305 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 58304 tgccgcaccctagatggct 58286
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 27476 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 27534 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 27535 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 27594 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27595 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 27654 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27655 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 27714 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27715 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 27774 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 27775 tgccgcaccctagatggct 27793
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 9268168 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 9268226 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9268227 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 9268286 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268287 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 9268346 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268347 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 9268406 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268407 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 9268466 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 9268467 tgccgcaccctagatggct 9268485 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 9227668 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 9227726 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9227727 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 9227786 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227787 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 9227846 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227847 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 9227906 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227907 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 9227966 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 9227967 tgccgcaccctagatggct 9227985 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 9164257 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 9164315 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9164316 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 9164375 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164376 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 9164435 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164436 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 9164495 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164496 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 9164555 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 9164556 tgccgcaccctagatggct 9164574 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 9056082 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 9056140 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9056141 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 9056200 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056201 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 9056260 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056261 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 9056320 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056321 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 9056380 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 9056381 tgccgcaccctagatggct 9056399
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 19938153 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 19938211 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 19938212 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 19938271 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938272 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 19938331 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938332 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 19938391 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938392 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 19938451 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 19938452 tgccgcaccctagatggct 19938470 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 10387020 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 10387078 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10387079 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 10387138 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 10387198 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 10387258 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387259 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 10387318 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 10387319 tgccgcaccctagatggct 10387337 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 10277278 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 10277220 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10277219 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 10277160 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277159 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 10277100 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277099 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 10277040 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277039 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 10276980 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 10276979 tgccgcaccctagatggct 10276961 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 ttgtgctgctaggcgaagcggttgagtgc 304 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 31598335 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 31598393 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 31598394 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 31598453 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598454 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 31598513 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598514 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 31598573 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598574 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 31598633 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 31598634 tgccgcaccctagatggct 31598652
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 33525651 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 33525709 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 33525710 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 33525769 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525770 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 33525829 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525830 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 33525889 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525890 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 33525949 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 33525950 tgccgcaccctagatggct 33525968 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 26 acgaggaagggcgtagcaagcgacgaaatgcttc 59 |||||| ||||| ||||||||||||||||||||| Sbjct: 19455163 acgaggtagggcatagcaagcgacgaaatgcttc 19455196
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 47890 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 47832 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 47831 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 47772 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47771 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 47712 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47711 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 47652 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47651 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 47592 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 47591 tgccgcaccctagatggct 47573
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 70848 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 70906 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 70907 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 70966 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70967 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 71026 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71027 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 71086 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71087 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 71146 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 71147 tgccgcaccctagatggct 71165
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 20 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 78 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 138 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 259 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 318 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 319 tgccgcaccctagatggct 337
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 21 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 79 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 80 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 139 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 199 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 259 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 260 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 319 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 320 tgccgcaccctagatggct 338
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 17 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 75 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 76 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 135 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 195 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 255 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 315 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 316 tgccgcaccctagatggct 334
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 19949429 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 19949487 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 19949488 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 19949547 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949548 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 19949607 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949608 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 19949667 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949668 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 19949727 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 19949728 tgccgcaccctagatggct 19949746 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 10393059 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 10393117 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10393118 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 10393177 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393178 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 10393237 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393238 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 10393297 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393298 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 10393357 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 10393358 tgccgcaccctagatggct 10393376 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 10283317 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 10283259 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10283258 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 10283199 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283198 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 10283139 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283138 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 10283079 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283078 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 10283019 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 10283018 tgccgcaccctagatggct 10283000 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 ttgtgctgctaggcgaagcggttgagtgc 304 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 119858 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 119800 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119799 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 119740 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119739 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 119680 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119679 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 119620 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119619 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 119560 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 119559 tgccgcaccctagatggct 119541 Score = 595 bits (300), Expect = e-167 Identities = 315/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 95181 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 95239 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95240 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 95299 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95300 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95359 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95360 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 95419 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95420 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 95479 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 95480 tgccgcaccctagatggct 95498
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 587 bits (296), Expect = e-165 Identities = 314/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 9242113 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 9242055 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9242054 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 9241995 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241994 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 9241935 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9241934 gaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaaacc 9241875 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241874 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 9241815 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 9241814 tgccgcaccctagatggct 9241796 Score = 67.9 bits (34), Expect = 2e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 158 actgaaacatcttagtagccagaggaaaagaaag 191 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 587 bits (296), Expect = e-165 Identities = 314/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 53326 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 53268 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 53267 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 53208 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53207 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 53148 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 53147 gaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaaacc 53088 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53087 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 53028 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 53027 tgccgcaccctagatggct 53009
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 579 bits (292), Expect = e-162 Identities = 313/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | | |||||||||||||||||||||||||||||||||| Sbjct: 123448 ggtggatacctaggtacccagag-atgaggaagggcgtagcaagcgacgaaatgcttcgg 123390 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123389 ggagttgaaattaagcatagatccggagattcccaaataggtcaaccttttgaactgcct 123330 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123329 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 123270 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123269 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 123210 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123209 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 123150 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 123149 tgccgcaccctagatggct 123131
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 579 bits (292), Expect = e-162 Identities = 313/319 (98%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | | |||||||||||||||||||||||||||||||||| Sbjct: 12825989 ggtggatacctaggtacccagag-atgaggaagggcgtagcaagcgacgaaatgcttcgg 12825931 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 12825930 ggagttgaaattaagcatagatccggagattcccaaataggtcaaccttttgaactgcct 12825871 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825870 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 12825811 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825810 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 12825751 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825750 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 12825691 Query: 302 tgccgcaccctagatggct 320 ||||||||||||||||||| Sbjct: 12825690 tgccgcaccctagatggct 12825672
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 573 bits (289), Expect = e-160 Identities = 314/320 (98%), Gaps = 2/320 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaag-ggcgtagcaagcgacgaaatgcttcg 60 ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 123654 ggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcg 123596 Query: 61 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 123595 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 123536 Query: 121 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 180 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123535 tgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 123476 Query: 181 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123475 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 123416 Query: 241 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 300 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 123415 cgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttga 123356 Query: 301 gtgccgcaccctagatggct 320 |||||||||||||||||||| Sbjct: 123355 gtgccgcaccctagatggct 123336 Score = 573 bits (289), Expect = e-160 Identities = 314/320 (98%), Gaps = 2/320 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaag-ggcgtagcaagcgacgaaatgcttcg 60 ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 99083 ggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcg 99141 Query: 61 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 99142 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 99201 Query: 121 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 180 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99202 tgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 99261 Query: 181 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99262 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 99321 Query: 241 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 300 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 99322 cgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttga 99381 Query: 301 gtgccgcaccctagatggct 320 |||||||||||||||||||| Sbjct: 99382 gtgccgcaccctagatggct 99401
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 573 bits (289), Expect = e-160 Identities = 314/320 (98%), Gaps = 2/320 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaag-ggcgtagcaagcgacgaaatgcttcg 60 ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 5436 ggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcg 5494 Query: 61 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 5495 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 5554 Query: 121 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 180 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5555 tgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 5614 Query: 181 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5615 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 5674 Query: 241 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 300 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 5675 cgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttga 5734 Query: 301 gtgccgcaccctagatggct 320 |||||||||||||||||||| Sbjct: 5735 gtgccgcaccctagatggct 5754
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 573 bits (289), Expect = e-160 Identities = 314/320 (98%), Gaps = 2/320 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaag-ggcgtagcaagcgacgaaatgcttcg 60 ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 24 ggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcg 82 Query: 61 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 83 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 142 Query: 121 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 180 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 tgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 202 Query: 181 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 262 Query: 241 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 300 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 263 cgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttga 322 Query: 301 gtgccgcaccctagatggct 320 |||||||||||||||||||| Sbjct: 323 gtgccgcaccctagatggct 342
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 567 bits (286), Expect = e-159 Identities = 292/294 (99%) Strand = Plus / Plus Query: 27 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 86 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 Query: 87 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 146 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 120 Query: 147 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 Query: 207 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 Query: 267 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 320 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 294
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 537 bits (271), Expect = e-150 Identities = 308/318 (96%), Gaps = 2/318 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 136569 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 136511 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 136510 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcaaactgc-t 136452 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136451 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 136392 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136391 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 136332 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 136331 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 136272 Query: 302 tgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 136271 tgctgcaccctagatggc 136254 Score = 537 bits (271), Expect = e-150 Identities = 308/318 (96%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 105856 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 105914 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 105915 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcaaactgc-t 105973 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105974 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106033 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106034 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106093 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 106094 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 106153 Query: 302 tgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 106154 tgctgcaccctagatggc 106171
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 529 bits (267), Expect = e-147 Identities = 307/318 (96%), Gaps = 2/318 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 139564 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 139506 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 139505 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 139447 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139446 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 139387 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139386 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 139327 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 139326 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 139267 Query: 302 tgccgcaccctagatggc 319 | | |||||||||||||| Sbjct: 139266 tactgcaccctagatggc 139249 Score = 529 bits (267), Expect = e-147 Identities = 307/318 (96%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 110381 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 110439 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 110440 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 110498 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110499 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 110558 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110559 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 110618 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 110619 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 110678 Query: 302 tgccgcaccctagatggc 319 | | |||||||||||||| Sbjct: 110679 tactgcaccctagatggc 110696
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 529 bits (267), Expect = e-147 Identities = 307/318 (96%), Gaps = 2/318 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 142086 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 142028 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| | Sbjct: 142027 ggagttgaaaataagcatagatccggagattcccgaatgggtcaacctttcgaactgc-t 141969 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141968 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 141909 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141908 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 141849 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 141848 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgag 141789 Query: 302 tgccgcaccctagatggc 319 | | |||||||||||||| Sbjct: 141788 tactgcaccctagatggc 141771 Score = 529 bits (267), Expect = e-147 Identities = 307/318 (96%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 111571 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 111629 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| | Sbjct: 111630 ggagttgaaaataagcatagatccggagattcccgaatgggtcaacctttcgaactgc-t 111688 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111689 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 111748 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111749 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 111808 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 111809 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgag 111868 Query: 302 tgccgcaccctagatggc 319 | | |||||||||||||| Sbjct: 111869 tactgcaccctagatggc 111886
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 523 bits (264), Expect = e-145 Identities = 307/319 (96%), Gaps = 2/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 134959 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 134901 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 134900 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 134842 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134841 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 134782 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134781 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 134722 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 134721 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggag 134662 Query: 302 tgccgcaccctagatggct 320 ||| ||||||||||||||| Sbjct: 134661 tgctgcaccctagatggct 134643 Score = 523 bits (264), Expect = e-145 Identities = 307/319 (96%), Gaps = 2/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 105323 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 105381 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 105382 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 105440 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105441 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 105500 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105501 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 105560 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 105561 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggag 105620 Query: 302 tgccgcaccctagatggct 320 ||| ||||||||||||||| Sbjct: 105621 tgctgcaccctagatggct 105639
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 521 bits (263), Expect = e-145 Identities = 306/318 (96%), Gaps = 2/318 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 132976 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 132918 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 132917 ggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-t 132859 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132858 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 132799 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132798 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 132739 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| Sbjct: 132738 gtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggag 132679 Query: 302 tgccgcaccctagatggc 319 |||||||||||||||||| Sbjct: 132678 tgccgcaccctagatggc 132661 Score = 521 bits (263), Expect = e-145 Identities = 306/318 (96%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 103788 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 103846 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 103847 ggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-t 103905 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103906 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 103965 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103966 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 104025 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| Sbjct: 104026 gtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggag 104085 Query: 302 tgccgcaccctagatggc 319 |||||||||||||||||| Sbjct: 104086 tgccgcaccctagatggc 104103
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 521 bits (263), Expect = e-145 Identities = 306/318 (96%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 88 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 89 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 147 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagag 207 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 327 Query: 302 tgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 328 tgctgcaccctagatggc 345
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 521 bits (263), Expect = e-145 Identities = 306/318 (96%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 88 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 89 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 147 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagag 207 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 327 Query: 302 tgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 328 tgctgcaccctagatggc 345
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 521 bits (263), Expect = e-145 Identities = 306/318 (96%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 88 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 89 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 147 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagag 207 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 327 Query: 302 tgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 328 tgctgcaccctagatggc 345
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 521 bits (263), Expect = e-145 Identities = 306/318 (96%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 88 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 89 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 147 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagag 207 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 327 Query: 302 tgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 328 tgctgcaccctagatggc 345
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 521 bits (263), Expect = e-145 Identities = 306/318 (96%), Gaps = 2/318 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 127842 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 127784 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 127783 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 127725 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127724 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 127665 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 127664 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaacc 127605 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 127604 gtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggag 127545 Query: 302 tgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 127544 tgctgcaccctagatggc 127527 Score = 521 bits (263), Expect = e-145 Identities = 306/318 (96%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 107080 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 107138 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 107139 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 107197 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107198 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 107257 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 107258 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaacc 107317 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 107318 gtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggag 107377 Query: 302 tgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 107378 tgctgcaccctagatggc 107395
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 521 bits (263), Expect = e-145 Identities = 306/318 (96%), Gaps = 2/318 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 134201 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 134143 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 134142 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 134084 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134083 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 134024 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134023 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 133964 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 133963 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaa 133904 Query: 302 tgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 133903 tgctgcaccctagatggc 133886 Score = 521 bits (263), Expect = e-145 Identities = 306/318 (96%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 103770 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 103828 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 103829 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 103887 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103888 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 103947 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103948 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 104007 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 104008 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaa 104067 Query: 302 tgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 104068 tgctgcaccctagatggc 104085
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 513 bits (259), Expect = e-142 Identities = 305/318 (95%), Gaps = 2/318 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 132753 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 132695 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 132694 ggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-t 132636 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132635 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 132576 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132575 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 132516 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 132515 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaa 132456 Query: 302 tgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 132455 tgctgcaccctagatggc 132438 Score = 513 bits (259), Expect = e-142 Identities = 305/318 (95%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 104125 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 104183 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 104184 ggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-t 104242 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104243 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 104302 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104303 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 104362 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 104363 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaa 104422 Query: 302 tgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 104423 tgctgcaccctagatggc 104440
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 513 bits (259), Expect = e-142 Identities = 305/318 (95%), Gaps = 2/318 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 131645 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 131587 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 131586 ggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-t 131528 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131527 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 131468 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131467 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 131408 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 131407 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaa 131348 Query: 302 tgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 131347 tgctgcaccctagatggc 131330 Score = 513 bits (259), Expect = e-142 Identities = 305/318 (95%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 102990 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 103048 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 103049 ggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-t 103107 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103108 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 103167 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103168 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 103227 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 103228 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaa 103287 Query: 302 tgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 103288 tgctgcaccctagatggc 103305
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 513 bits (259), Expect = e-142 Identities = 305/318 (95%), Gaps = 2/318 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 140338 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 140280 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 140279 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 140221 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140220 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 140161 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140160 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 140101 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 140100 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaa 140041 Query: 302 tgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 140040 tgctgcaccctagatggc 140023 Score = 513 bits (259), Expect = e-142 Identities = 305/318 (95%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 109722 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 109780 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 109781 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 109839 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109840 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 109899 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109900 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 109959 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 109960 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaa 110019 Query: 302 tgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 110020 tgctgcaccctagatggc 110037
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 513 bits (259), Expect = e-142 Identities = 305/318 (95%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 21 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 79 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 80 ggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-t 138 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||| | |||||| |||||||||||||||||||| ||| Sbjct: 259 gtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggag 318 Query: 302 tgccgcaccctagatggc 319 |||||||||||||||||| Sbjct: 319 tgccgcaccctagatggc 336
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 513 bits (259), Expect = e-142 Identities = 305/318 (95%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 88 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 89 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 147 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagag 207 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggag 327 Query: 302 tgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 328 tgctgcaccctagatggc 345
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 513 bits (259), Expect = e-142 Identities = 305/318 (95%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 88 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 || ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 89 ggggttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 147 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagag 207 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 327 Query: 302 tgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 328 tgctgcaccctagatggc 345
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 513 bits (259), Expect = e-142 Identities = 305/318 (95%), Gaps = 2/318 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 133937 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 133879 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 133878 ggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-t 133820 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133819 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 133760 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133759 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 133700 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||| | |||||| |||||||||||||||||||| ||| Sbjct: 133699 gtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggag 133640 Query: 302 tgccgcaccctagatggc 319 |||||||||||||||||| Sbjct: 133639 tgccgcaccctagatggc 133622 Score = 513 bits (259), Expect = e-142 Identities = 305/318 (95%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 104712 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 104770 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 104771 ggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-t 104829 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104830 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 104889 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104890 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 104949 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||| | |||||| |||||||||||||||||||| ||| Sbjct: 104950 gtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggag 105009 Query: 302 tgccgcaccctagatggc 319 |||||||||||||||||| Sbjct: 105010 tgccgcaccctagatggc 105027
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 513 bits (259), Expect = e-142 Identities = 305/318 (95%), Gaps = 2/318 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | ||||||| |||||||| ||||||||||||||||||| Sbjct: 130513 ggtggatacctaggcacccagag-acgaggaggggcgtagtaagcgacgaaatgcttcgg 130455 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | | Sbjct: 130454 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactac-t 130396 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130395 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 130336 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130335 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 130276 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| Sbjct: 130275 gtgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggag 130216 Query: 302 tgccgcaccctagatggc 319 |||||||||||||||||| Sbjct: 130215 tgccgcaccctagatggc 130198 Score = 513 bits (259), Expect = e-142 Identities = 305/318 (95%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | ||||||| |||||||| ||||||||||||||||||| Sbjct: 101943 ggtggatacctaggcacccagag-acgaggaggggcgtagtaagcgacgaaatgcttcgg 102001 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | | Sbjct: 102002 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactac-t 102060 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102061 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 102120 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102121 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 102180 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| Sbjct: 102181 gtgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggag 102240 Query: 302 tgccgcaccctagatggc 319 |||||||||||||||||| Sbjct: 102241 tgccgcaccctagatggc 102258
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 513 bits (259), Expect = e-142 Identities = 305/318 (95%), Gaps = 2/318 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 132746 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 132688 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 132687 ggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-t 132629 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132628 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 132569 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132568 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 132509 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 132508 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaa 132449 Query: 302 tgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 132448 tgctgcaccctagatggc 132431 Score = 513 bits (259), Expect = e-142 Identities = 305/318 (95%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 104123 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 104181 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 104182 ggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-t 104240 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104241 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 104300 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104301 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 104360 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 104361 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaa 104420 Query: 302 tgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 104421 tgctgcaccctagatggc 104438
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 507 bits (256), Expect = e-141 Identities = 302/315 (95%), Gaps = 2/315 (0%) Strand = Plus / Plus Query: 5 ggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgggga 64 |||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||| Sbjct: 22 ggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgggga 80 Query: 65 gttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 124 ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||| Sbjct: 81 gttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgct 139 Query: 125 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 184 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 gaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 199 Query: 185 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 259 Query: 245 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 304 |||||||||||||||||||||||||||||||| |||||||||||||||||||| || | | Sbjct: 260 aaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggaatac 319 Query: 305 cgcaccctagatggc 319 |||||||||||||| Sbjct: 320 tgcaccctagatggc 334
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 507 bits (256), Expect = e-141 Identities = 271/275 (98%), Gaps = 1/275 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 20 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 78 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 138 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgt 276 ||||||||||||||||||||||||||||||||||| Sbjct: 259 gtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 507 bits (256), Expect = e-141 Identities = 271/275 (98%), Gaps = 1/275 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 20 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 78 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 138 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgt 276 ||||||||||||||||||||||||||||||||||| Sbjct: 259 gtgaaaacggggttgtgggagagcaatacaagcgt 293
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 505 bits (255), Expect = e-140 Identities = 304/318 (95%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 106027 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 106085 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 106086 ggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 106144 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106145 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106204 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106205 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106264 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 106265 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggag 106324 Query: 302 tgccgcaccctagatggc 319 || |||||||||||||| Sbjct: 106325 tgttgcaccctagatggc 106342 Score = 492 bits (248), Expect = e-136 Identities = 304/319 (95%), Gaps = 3/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 135882 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 135824 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 135823 ggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 135765 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135764 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135705 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135704 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135645 Query: 242 gtgaaaacggggttgtgggagagc-aatacaagcgttgtgctgctaggcgaagcggttga 300 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || || Sbjct: 135644 gtgaaaacggggttgtgggagagcaaatacaagcgtcgtgctgctaggcgaagcagtgga 135585 Query: 301 gtgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 135584 gtgttgcaccctagatggc 135566
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 505 bits (255), Expect = e-140 Identities = 304/318 (95%), Gaps = 2/318 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 136158 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 136100 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 136099 ggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 136041 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136040 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135981 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135980 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135921 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 135920 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggag 135861 Query: 302 tgccgcaccctagatggc 319 || |||||||||||||| Sbjct: 135860 tgttgcaccctagatggc 135843 Score = 505 bits (255), Expect = e-140 Identities = 304/318 (95%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 106249 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 106307 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 106308 ggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 106366 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106367 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106426 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106427 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106486 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 106487 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggag 106546 Query: 302 tgccgcaccctagatggc 319 || |||||||||||||| Sbjct: 106547 tgttgcaccctagatggc 106564
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 494 bits (249), Expect = e-137 Identities = 305/320 (95%), Gaps = 3/320 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 22 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 80 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 81 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 139 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 140 gctgaatccatgggcaggcaagagacaacctaacgaactgaaacatcttagtagccagag 199 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagc-ggcgagcgaaatgggagcagcctaaac 240 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 200 gaaaagaaagcaaaagcgattcccgtagtagcaggcgagcgaaatgggagcagcctaaac 259 Query: 241 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 300 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 260 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgaa 319 Query: 301 gtgccgcaccctagatggct 320 |||||| ||||||||||||| Sbjct: 320 gtgccgaaccctagatggct 339
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 492 bits (248), Expect = e-136 Identities = 303/319 (94%), Gaps = 2/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||| |||||||||| || |||||||||||||||| Sbjct: 46274 ggtggatacctaggcacccagag-acgaagaagggcgtattaatcgacgaaatgcttcgg 46332 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 46333 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 46391 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 46392 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccagag 46451 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 46452 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaacc 46511 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 46512 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 46571 Query: 302 tgccgcaccctagatggct 320 | ||||||||||||||||| Sbjct: 46572 taccgcaccctagatggct 46590
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 492 bits (248), Expect = e-136 Identities = 251/252 (99%) Strand = Plus / Plus Query: 69 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 128 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 129 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 189 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 249 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 309 ccctagatggct 320 |||||||||||| Sbjct: 241 ccctagatggct 252
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 490 bits (247), Expect = e-135 Identities = 302/318 (94%), Gaps = 2/318 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 139482 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 139424 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 139423 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-t 139365 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 139364 gctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggag 139305 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139304 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 139245 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| || Sbjct: 139244 gtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaag 139185 Query: 302 tgccgcaccctagatggc 319 ||||| |||||||||||| Sbjct: 139184 tgccgaaccctagatggc 139167 Score = 490 bits (247), Expect = e-135 Identities = 302/318 (94%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 109615 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 109673 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 109674 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-t 109732 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 109733 gctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggag 109792 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109793 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 109852 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| || Sbjct: 109853 gtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaag 109912 Query: 302 tgccgcaccctagatggc 319 ||||| |||||||||||| Sbjct: 109913 tgccgaaccctagatggc 109930
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 490 bits (247), Expect = e-135 Identities = 302/318 (94%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 71 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 129 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 130 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-t 188 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 189 gctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggag 248 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 308 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| || Sbjct: 309 gtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaag 368 Query: 302 tgccgcaccctagatggc 319 ||||| |||||||||||| Sbjct: 369 tgccgaaccctagatggc 386
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 490 bits (247), Expect = e-135 Identities = 303/318 (95%), Gaps = 3/318 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 139691 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 139633 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 139632 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-t 139574 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139573 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 139514 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139513 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 139454 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tga 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 139453 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcga 139394 Query: 301 gtgccgcaccctagatgg 318 ||| ||||||||||||| Sbjct: 139393 atgctgcaccctagatgg 139376 Score = 490 bits (247), Expect = e-135 Identities = 303/318 (95%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 109608 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 109666 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 109667 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-t 109725 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109726 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 109785 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109786 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 109845 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tga 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 109846 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcga 109905 Query: 301 gtgccgcaccctagatgg 318 ||| ||||||||||||| Sbjct: 109906 atgctgcaccctagatgg 109923
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 484 bits (244), Expect = e-134 Identities = 303/319 (94%), Gaps = 3/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 136916 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 136858 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 136857 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 136799 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136798 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 136739 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136738 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 136679 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 136678 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 136619 Query: 301 gtgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 136618 atgctgcaccctagatggc 136600 Score = 484 bits (244), Expect = e-134 Identities = 303/319 (94%), Gaps = 3/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 106641 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 106699 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 106700 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 106758 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106759 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106818 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106819 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106878 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 106879 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 106938 Query: 301 gtgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 106939 atgctgcaccctagatggc 106957
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 484 bits (244), Expect = e-134 Identities = 303/319 (94%), Gaps = 3/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 135524 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 135466 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 135465 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 135407 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135406 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135347 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135346 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135287 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135286 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 135227 Query: 301 gtgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 135226 atgctgcaccctagatggc 135208 Score = 484 bits (244), Expect = e-134 Identities = 303/319 (94%), Gaps = 3/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 105512 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 105570 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 105571 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 105629 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105630 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 105689 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105690 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 105749 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105750 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 105809 Query: 301 gtgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 105810 atgctgcaccctagatggc 105828
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 484 bits (244), Expect = e-134 Identities = 303/319 (94%), Gaps = 3/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 135659 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 135601 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 135600 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 135542 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135541 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135482 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135481 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135422 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135421 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 135362 Query: 301 gtgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 135361 atgctgcaccctagatggc 135343 Score = 484 bits (244), Expect = e-134 Identities = 303/319 (94%), Gaps = 3/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 105684 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 105742 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 105743 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 105801 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105802 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 105861 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105862 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 105921 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105922 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 105981 Query: 301 gtgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 105982 atgctgcaccctagatggc 106000
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 484 bits (244), Expect = e-134 Identities = 303/319 (94%), Gaps = 3/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 135657 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 135599 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 135598 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 135540 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135539 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135480 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135479 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135420 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135419 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 135360 Query: 301 gtgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 135359 atgctgcaccctagatggc 135341 Score = 484 bits (244), Expect = e-134 Identities = 303/319 (94%), Gaps = 3/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 105681 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 105739 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 105740 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 105798 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105799 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 105858 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105859 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 105918 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105919 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 105978 Query: 301 gtgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 105979 atgctgcaccctagatggc 105997
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 484 bits (244), Expect = e-134 Identities = 303/319 (94%), Gaps = 3/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 135569 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 135511 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 135510 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 135452 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135451 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135392 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135391 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135332 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135331 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 135272 Query: 301 gtgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 135271 atgctgcaccctagatggc 135253 Score = 484 bits (244), Expect = e-134 Identities = 303/319 (94%), Gaps = 3/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 105559 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 105617 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 105618 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 105676 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105677 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 105736 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105737 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 105796 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105797 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 105856 Query: 301 gtgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 105857 atgctgcaccctagatggc 105875
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 484 bits (244), Expect = e-134 Identities = 299/315 (94%), Gaps = 2/315 (0%) Strand = Plus / Plus Query: 4 tggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgggg 63 ||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||| Sbjct: 1 tggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgggg 59 Query: 64 agttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgc 123 |||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||| Sbjct: 60 agttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgc 118 Query: 124 tgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagga 183 ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119 cgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagagga 178 Query: 184 aaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 aaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 238 Query: 244 gaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtg 303 ||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 239 gaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggccgaaca 298 Query: 304 ccgcaccctagatgg 318 ||||||||||||||| Sbjct: 299 ccgcaccctagatgg 313
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 484 bits (244), Expect = e-134 Identities = 303/319 (94%), Gaps = 3/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 135536 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 135478 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 135477 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 135419 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135418 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135359 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135358 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135299 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135298 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 135239 Query: 301 gtgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 135238 atgctgcaccctagatggc 135220 Score = 484 bits (244), Expect = e-134 Identities = 303/319 (94%), Gaps = 3/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 105526 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 105584 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 105585 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 105643 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105644 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 105703 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105704 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 105763 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105764 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 105823 Query: 301 gtgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 105824 atgctgcaccctagatggc 105842
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 480 bits (242), Expect = e-132 Identities = 282/293 (96%), Gaps = 2/293 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 136278 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 136220 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 136219 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 136161 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136160 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 136101 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136100 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 136041 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 294 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 136040 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 135988 Score = 480 bits (242), Expect = e-132 Identities = 282/293 (96%), Gaps = 2/293 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 106352 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 106410 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 106411 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 106469 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106470 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106529 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106530 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106589 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 294 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106590 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 106642
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 480 bits (242), Expect = e-132 Identities = 282/293 (96%), Gaps = 2/293 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 1546 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 1604 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 1605 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 1663 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1664 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 1723 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1724 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 1783 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 294 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1784 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 1836
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 480 bits (242), Expect = e-132 Identities = 300/317 (94%), Gaps = 2/317 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 81 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| ||||||||||||||||||||||||||||| ||| ||| |||||||| |||||| | Sbjct: 82 ggagctgaaaataagcatagatccggagattcccgaatgggttaaccttttgaactgc-t 140 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 200 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 201 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 260 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||| Sbjct: 261 gtgaaaacggggttgtgggagagcaatataagtgttgtgttgctaggcgaagcggttgag 320 Query: 302 tgccgcaccctagatgg 318 | |||||||| |||||| Sbjct: 321 tcccgcaccccagatgg 337
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 480 bits (242), Expect = e-132 Identities = 282/293 (96%), Gaps = 2/293 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 136276 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 136218 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 136217 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 136159 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136158 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 136099 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136098 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 136039 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 294 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 136038 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 135986 Score = 480 bits (242), Expect = e-132 Identities = 282/293 (96%), Gaps = 2/293 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 106350 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 106408 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 106409 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 106467 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106468 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106527 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106528 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106587 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 294 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106588 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 106640
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 480 bits (242), Expect = e-132 Identities = 300/317 (94%), Gaps = 2/317 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 4522 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 4580 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 4581 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 4639 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4640 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 4699 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4700 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 4759 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 4760 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaa 4819 Query: 302 tgccgcaccctagatgg 318 || ||||||||||||| Sbjct: 4820 tgttgcaccctagatgg 4836
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 480 bits (242), Expect = e-132 Identities = 300/317 (94%), Gaps = 2/317 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 4522 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 4580 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 4581 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 4639 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4640 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 4699 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4700 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 4759 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 4760 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaa 4819 Query: 302 tgccgcaccctagatgg 318 || ||||||||||||| Sbjct: 4820 tgttgcaccctagatgg 4836
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 77 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 136 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 137 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 197 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 257 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 317 ggct 320 |||| Sbjct: 241 ggct 244
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 474 bits (239), Expect = e-131 Identities = 242/243 (99%) Strand = Plus / Plus Query: 78 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 137 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 138 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 198 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 258 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 318 gct 320 ||| Sbjct: 241 gct 243
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 472 bits (238), Expect = e-130 Identities = 278/289 (96%), Gaps = 2/289 (0%) Strand = Plus / Plus Query: 6 gatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 65 ||||||||||||||||| | |||||||||||||||| || |||||||||||||||||||| Sbjct: 1 gatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggag 59 Query: 66 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 125 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 60 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 118 Query: 126 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 185 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 178 Query: 186 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 238 Query: 246 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 294 ||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 239 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 287
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 472 bits (238), Expect = e-130 Identities = 299/317 (94%), Gaps = 2/317 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||| Sbjct: 131769 ggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcgg 131711 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||| |||||||||||||||| ||||||||||||||| |||| | | Sbjct: 131710 ggagttgaaaataagcagagatccggagattcccgaataggtcaacctttcgaacttc-t 131652 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131651 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 131592 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131591 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 131532 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||| | || ||| Sbjct: 131531 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggag 131472 Query: 302 tgccgcaccctagatgg 318 ||| | ||||||||||| Sbjct: 131471 tgcggaaccctagatgg 131455 Score = 472 bits (238), Expect = e-130 Identities = 299/317 (94%), Gaps = 2/317 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||| Sbjct: 101676 ggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcgg 101734 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||| |||||||||||||||| ||||||||||||||| |||| | | Sbjct: 101735 ggagttgaaaataagcagagatccggagattcccgaataggtcaacctttcgaacttc-t 101793 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101794 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 101853 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101854 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 101913 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||| | || ||| Sbjct: 101914 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggag 101973 Query: 302 tgccgcaccctagatgg 318 ||| | ||||||||||| Sbjct: 101974 tgcggaaccctagatgg 101990
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 472 bits (238), Expect = e-130 Identities = 281/293 (95%), Gaps = 2/293 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 136007 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 135949 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||| ||||||| |||||| |||||||| |||||| | Sbjct: 135948 ggagttgaaaataagcatagatccggggattcccgaatagggcaacctttcgaactgc-t 135890 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135889 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135830 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135829 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135770 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 294 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135769 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 135717 Score = 472 bits (238), Expect = e-130 Identities = 281/293 (95%), Gaps = 2/293 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 106131 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 106189 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||| ||||||| |||||| |||||||| |||||| | Sbjct: 106190 ggagttgaaaataagcatagatccggggattcccgaatagggcaacctttcgaactgc-t 106248 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106249 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106308 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106309 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106368 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 294 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106369 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 106421
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 468 bits (236), Expect = e-129 Identities = 239/240 (99%) Strand = Plus / Plus Query: 81 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 140 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 141 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 201 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 261 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 458 bits (231), Expect = e-126 Identities = 296/314 (94%), Gaps = 3/314 (0%) Strand = Plus / Minus Query: 6 gatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 65 ||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||| Sbjct: 142853 gatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggag 142795 Query: 66 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 125 |||||||||||| |||||||||||||||| ||| ||||||||||| |||||| ||||| Sbjct: 142794 ttgaaaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctg 142736 Query: 126 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 185 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142735 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 142676 Query: 186 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142675 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 142616 Query: 246 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgc 304 ||||||||||||||||||| |||||||||| ||||||||||||||||| | | |||||| Sbjct: 142615 aaacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgc 142556 Query: 305 cgcaccctagatgg 318 ||||||||||||| Sbjct: 142555 tgcaccctagatgg 142542 Score = 458 bits (231), Expect = e-126 Identities = 296/314 (94%), Gaps = 3/314 (0%) Strand = Plus / Plus Query: 6 gatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 65 ||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||| Sbjct: 110475 gatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggag 110533 Query: 66 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 125 |||||||||||| |||||||||||||||| ||| ||||||||||| |||||| ||||| Sbjct: 110534 ttgaaaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctg 110592 Query: 126 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 185 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110593 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 110652 Query: 186 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110653 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 110712 Query: 246 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgc 304 ||||||||||||||||||| |||||||||| ||||||||||||||||| | | |||||| Sbjct: 110713 aaacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgc 110772 Query: 305 cgcaccctagatgg 318 ||||||||||||| Sbjct: 110773 tgcaccctagatgg 110786
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 456 bits (230), Expect = e-125 Identities = 279/293 (95%), Gaps = 2/293 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 4253 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 4311 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 4312 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 4370 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4371 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 4430 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4431 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaacc 4490 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 294 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 4491 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagc 4543
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 456 bits (230), Expect = e-125 Identities = 279/293 (95%), Gaps = 2/293 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 23672 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 23614 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 23613 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 23555 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23554 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 23495 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 23494 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaacc 23435 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 294 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 23434 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagc 23382
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 456 bits (230), Expect = e-125 Identities = 297/317 (93%), Gaps = 2/317 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcgg 88 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||| |||||||||||||||| |||||| |||||||| |||| | | Sbjct: 89 ggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-t 147 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 207 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||| | || ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggag 327 Query: 302 tgccgcaccctagatgg 318 ||| | ||||||||||| Sbjct: 328 tgcggtaccctagatgg 344
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 456 bits (230), Expect = e-125 Identities = 297/317 (93%), Gaps = 2/317 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcgg 88 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||| |||||||||||||||| |||||| |||||||| |||| | | Sbjct: 89 ggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-t 147 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 207 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||| | || ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggag 327 Query: 302 tgccgcaccctagatgg 318 ||| | ||||||||||| Sbjct: 328 tgcggtaccctagatgg 344
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 456 bits (230), Expect = e-125 Identities = 297/317 (93%), Gaps = 2/317 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||| Sbjct: 518 ggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcgg 576 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||| |||||||||||||||| |||||| |||||||| |||| | | Sbjct: 577 ggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-t 635 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 636 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 695 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 696 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 755 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||||||||||||||||||| ||||||||||||||| | || ||| Sbjct: 756 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggag 815 Query: 302 tgccgcaccctagatgg 318 ||| | ||||||||||| Sbjct: 816 tgcggtaccctagatgg 832
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 454 bits (229), Expect = e-125 Identities = 299/319 (93%), Gaps = 4/319 (1%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||| | ||||||||||||||||||| Sbjct: 86284 ggtggatacctaggcacccagag-acgaggaagggcgtggtaagcgacgaaatgcttcgg 86342 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||| ||||||||||||||||||||| ||||||| |||| ||| |||||| | Sbjct: 86343 ggagttgaaaatgagcatagatccggagattcccgaataggttaacccttttaactgc-t 86401 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86402 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 86461 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 86462 gaatagaaagcaaaagcgattcccgtagtagtggcgagcgaaatgggagcagcctaaacc 86521 Query: 242 gtgaaaacggggttgtgggagag--caatacaagcgttgtgctgctaggcgaagcggttg 299 ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||| Sbjct: 86522 gtgaaaacggggttgtgggagagcccaatataagctctgtgctgctaggcgaagcggttg 86581 Query: 300 agtgccgcaccctagatgg 318 ||| | ||||||||||||| Sbjct: 86582 agtcctgcaccctagatgg 86600
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 454 bits (229), Expect = e-125 Identities = 299/319 (93%), Gaps = 4/319 (1%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||| | ||||||||||||||||||| Sbjct: 88370 ggtggatacctaggcacccagag-acgaggaagggcgtggtaagcgacgaaatgcttcgg 88428 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||| ||||||||||||||||||||| ||||||| |||||||| ||||| | Sbjct: 88429 ggagttgaaaattagcatagatccggagattcccgaataggttaacctttttcactgc-t 88487 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 88488 gctgaatccatgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagag 88547 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88548 gaatagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 88607 Query: 242 gtgaaaacggggttgtgggagag--caatacaagcgttgtgctgctaggcgaagcggttg 299 ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||| Sbjct: 88608 gtgaaaacggggttgtgggagagcacaatataagctctgtgctgctaggcgaagcggttg 88667 Query: 300 agtgccgcaccctagatgg 318 ||| | ||||||||||||| Sbjct: 88668 agtcctgcaccctagatgg 88686
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 448 bits (226), Expect = e-123 Identities = 296/317 (93%), Gaps = 2/317 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 2066 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 2124 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 2125 ggagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-t 2183 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2184 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 2243 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 2244 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaacc 2303 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||| | ||| ||||| ||||||||||||| |||||| Sbjct: 2304 gtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgag 2363 Query: 302 tgccgcaccctagatgg 318 | | ||||||||||||| Sbjct: 2364 tcctgcaccctagatgg 2380
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 448 bits (226), Expect = e-123 Identities = 296/317 (93%), Gaps = 2/317 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 118127 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 118069 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 118068 ggagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-t 118010 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118009 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 117950 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 117949 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaacc 117890 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||| | ||| ||||| ||||||||||||| |||||| Sbjct: 117889 gtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgag 117830 Query: 302 tgccgcaccctagatgg 318 | | ||||||||||||| Sbjct: 117829 tcctgcaccctagatgg 117813 Score = 448 bits (226), Expect = e-123 Identities = 296/317 (93%), Gaps = 2/317 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 89975 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 90033 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 90034 ggagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-t 90092 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90093 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 90152 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 90153 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaacc 90212 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||| | ||| ||||| ||||||||||||| |||||| Sbjct: 90213 gtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgag 90272 Query: 302 tgccgcaccctagatgg 318 | | ||||||||||||| Sbjct: 90273 tcctgcaccctagatgg 90289
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 448 bits (226), Expect = e-123 Identities = 280/293 (95%), Gaps = 4/293 (1%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 122 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 180 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 181 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 239 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt-agccaga 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 240 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtgagccaga 299 Query: 181 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 359 Query: 241 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 293 ||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 360 cgtgaaaac-gggttgtgggagagcaatacaagcgtcgtgctgctaggcgaag 411
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 440 bits (222), Expect = e-120 Identities = 295/317 (93%), Gaps = 2/317 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 3912 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 3970 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 3971 ggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 4029 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| || || | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 4030 gctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagag 4089 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4090 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 4149 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| Sbjct: 4150 gtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgag 4209 Query: 302 tgccgcaccctagatgg 318 | | |||||| |||||| Sbjct: 4210 ttctgcaccccagatgg 4226
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 440 bits (222), Expect = e-120 Identities = 295/317 (93%), Gaps = 2/317 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 146537 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 146479 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| |||| | | Sbjct: 146478 ggagctgaaaatgagcatggatccggagattcccgaataggttaaccttttgaactac-t 146420 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 146419 gctgaattcataggcaggcgagagacaacctggcgaactgaaacatcttagtagccagag 146360 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 146359 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 146300 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||| Sbjct: 146299 gtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgag 146240 Query: 302 tgccgcaccctagatgg 318 | | | ||||||||||| Sbjct: 146239 tcctgtaccctagatgg 146223 Score = 440 bits (222), Expect = e-120 Identities = 295/317 (93%), Gaps = 2/317 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 111925 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 111983 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| |||| | | Sbjct: 111984 ggagctgaaaatgagcatggatccggagattcccgaataggttaaccttttgaactac-t 112042 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 112043 gctgaattcataggcaggcgagagacaacctggcgaactgaaacatcttagtagccagag 112102 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 112103 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 112162 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||| Sbjct: 112163 gtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgag 112222 Query: 302 tgccgcaccctagatgg 318 | | | ||||||||||| Sbjct: 112223 tcctgtaccctagatgg 112239
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 440 bits (222), Expect = e-120 Identities = 295/317 (93%), Gaps = 2/317 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 22 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 80 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 81 ggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 139 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| || || | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 140 gctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagag 199 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 200 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 259 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| Sbjct: 260 gtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgag 319 Query: 302 tgccgcaccctagatgg 318 | | |||||| |||||| Sbjct: 320 ttctgcaccccagatgg 336
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 440 bits (222), Expect = e-120 Identities = 295/317 (93%), Gaps = 2/317 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 151223 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 151165 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 151164 ggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 151106 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| || || | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 151105 gctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagag 151046 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 151045 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 150986 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| Sbjct: 150985 gtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgag 150926 Query: 302 tgccgcaccctagatgg 318 | | |||||| |||||| Sbjct: 150925 ttctgcaccccagatgg 150909 Score = 440 bits (222), Expect = e-120 Identities = 295/317 (93%), Gaps = 2/317 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 117443 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 117501 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 117502 ggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 117560 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| || || | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 117561 gctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagag 117620 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 117621 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 117680 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| Sbjct: 117681 gtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgag 117740 Query: 302 tgccgcaccctagatgg 318 | | |||||| |||||| Sbjct: 117741 ttctgcaccccagatgg 117757
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 440 bits (222), Expect = e-120 Identities = 295/317 (93%), Gaps = 2/317 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 22 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 80 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 81 ggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 139 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| || || | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 140 gctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagag 199 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 200 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 259 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| Sbjct: 260 gtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgag 319 Query: 302 tgccgcaccctagatgg 318 | | |||||| |||||| Sbjct: 320 ttctgcaccccagatgg 336
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 434 bits (219), Expect = e-119 Identities = 299/321 (93%), Gaps = 5/321 (1%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 131849 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 131791 Query: 62 ggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcc 120 |||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 131790 ggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc- 131732 Query: 121 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 180 ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 131731 tgctgaatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccaga 131672 Query: 181 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131671 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 131612 Query: 241 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 300 ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | || Sbjct: 131611 cgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcaga 131552 Query: 301 g--tgccgcaccctagatggc 319 | ||| |||||||||||||| Sbjct: 131551 gaatgctgcaccctagatggc 131531 Score = 434 bits (219), Expect = e-119 Identities = 299/321 (93%), Gaps = 5/321 (1%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 103545 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 103603 Query: 62 ggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcc 120 |||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 103604 ggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc- 103662 Query: 121 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 180 ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 103663 tgctgaatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccaga 103722 Query: 181 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103723 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 103782 Query: 241 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 300 ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | || Sbjct: 103783 cgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcaga 103842 Query: 301 g--tgccgcaccctagatggc 319 | ||| |||||||||||||| Sbjct: 103843 gaatgctgcaccctagatggc 103863
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 428 bits (216), Expect = e-117 Identities = 296/319 (92%), Gaps = 3/319 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||| |||| || |||||||||||||||| Sbjct: 52664 ggtggatacctaggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcgg 52606 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| | Sbjct: 52605 ggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-t 52547 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 52546 gctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccagag 52487 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 52486 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaacc 52427 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttga 300 | |||||||||||||||||||||||||| ||| || ||||||||||||||| | | |||| Sbjct: 52426 gcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttga 52367 Query: 301 gtgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 52366 atgctgcaccctagatggc 52348 Score = 428 bits (216), Expect = e-117 Identities = 296/319 (92%), Gaps = 3/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||| |||| || |||||||||||||||| Sbjct: 37164 ggtggatacctaggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcgg 37222 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| | Sbjct: 37223 ggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-t 37281 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 37282 gctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccagag 37341 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 37342 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaacc 37401 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttga 300 | |||||||||||||||||||||||||| ||| || ||||||||||||||| | | |||| Sbjct: 37402 gcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttga 37461 Query: 301 gtgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 37462 atgctgcaccctagatggc 37480
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 428 bits (216), Expect = e-117 Identities = 296/319 (92%), Gaps = 3/319 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||| |||| || |||||||||||||||| Sbjct: 4092 ggtggatacctaggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcgg 4150 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| | Sbjct: 4151 ggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-t 4209 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 4210 gctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccagag 4269 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4270 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaacc 4329 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttga 300 | |||||||||||||||||||||||||| ||| || ||||||||||||||| | | |||| Sbjct: 4330 gcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttga 4389 Query: 301 gtgccgcaccctagatggc 319 ||| |||||||||||||| Sbjct: 4390 atgctgcaccctagatggc 4408
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 426 bits (215), Expect = e-116 Identities = 298/321 (92%), Gaps = 5/321 (1%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 2621 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 2679 Query: 62 ggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcc 120 |||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 2680 ggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc- 2738 Query: 121 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 180 ||||||||||| | |||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 2739 tgctgaatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccaga 2798 Query: 181 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2799 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 2858 Query: 241 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 300 ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | || Sbjct: 2859 cgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcaga 2918 Query: 301 g--tgccgcaccctagatggc 319 | ||| |||||||||||||| Sbjct: 2919 gaatgctgcaccctagatggc 2939
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 426 bits (215), Expect = e-116 Identities = 298/321 (92%), Gaps = 5/321 (1%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 876 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 934 Query: 62 ggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcc 120 |||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 935 ggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc- 993 Query: 121 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 180 ||||||||||| | |||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 994 tgctgaatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccaga 1053 Query: 181 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1054 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 1113 Query: 241 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 300 ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | || Sbjct: 1114 cgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcaga 1173 Query: 301 g--tgccgcaccctagatggc 319 | ||| |||||||||||||| Sbjct: 1174 gaatgctgcaccctagatggc 1194
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 424 bits (214), Expect = e-116 Identities = 293/317 (92%), Gaps = 2/317 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 6 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 64 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| |||||||||| |||||||||||||||||| ||||||| ||||||||||||||| | Sbjct: 65 ggagctgaaaataagtatagatccggagattcccgaataggttaaccttttaaactgc-t 123 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 124 gctgaatccataggcgggcaagagacaacctggcgaactgaaacatcttagtagccggag 183 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 ||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 184 gaagagaaagcaaaagcgattctcgtagtagcggcgagcgaaacgggagcagcctaaacc 243 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||| |||| | | |||| |||| ||||||||||||| |||||| Sbjct: 244 gtgaaaacggggttgtgggggagctaaagaagcattgtattgctaggcgaagcagttgag 303 Query: 302 tgccgcaccctagatgg 318 | | ||||||||||||| Sbjct: 304 tcctgcaccctagatgg 320
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 424 bits (214), Expect = e-116 Identities = 298/324 (91%), Gaps = 8/324 (2%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||| ||| | ||||||||||||||||||| |||||||||||||||| Sbjct: 128424 ggtggatacctaggcactcagag-acgaggaagggcgtagcaatcgacgaaatgcttcgg 128366 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 128365 ggagctgaaaacaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 128307 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128306 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 128247 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||| ||||||||| ||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 128246 gaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaacc 128187 Query: 242 gtgaaaacggggttgtgggagagc------aatacaagcgttgtgctgctaggcgaagcg 295 ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 128186 gtgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagcg 128127 Query: 296 gttgagtgccgcaccctagatggc 319 ||||||| |||||||||||||||| Sbjct: 128126 gttgagtcccgcaccctagatggc 128103 Score = 424 bits (214), Expect = e-116 Identities = 298/324 (91%), Gaps = 8/324 (2%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||| ||| | ||||||||||||||||||| |||||||||||||||| Sbjct: 95023 ggtggatacctaggcactcagag-acgaggaagggcgtagcaatcgacgaaatgcttcgg 95081 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 95082 ggagctgaaaacaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 95140 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95141 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95200 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||| ||||||||| ||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 95201 gaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaacc 95260 Query: 242 gtgaaaacggggttgtgggagagc------aatacaagcgttgtgctgctaggcgaagcg 295 ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 95261 gtgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagcg 95320 Query: 296 gttgagtgccgcaccctagatggc 319 ||||||| |||||||||||||||| Sbjct: 95321 gttgagtcccgcaccctagatggc 95344
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 420 bits (212), Expect = e-114 Identities = 279/295 (94%), Gaps = 5/295 (1%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| || | |||||||||||||| Sbjct: 1789 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatc-acgaaatgcttcgg 1846 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 1847 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 1905 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1906 gctgaatccatgggcaggcaagagacaacctggcgaactgaaccatcttagtagccagag 1965 Query: 182 gaaaagaaagcaaaag-cgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 240 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1966 gaaaagaaagcaaaaggcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 2025 Query: 241 cgtgaaaacggggttgtgggagagcaatacaagc-gttgtgctgctaggcgaagc 294 |||||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 2026 cgtgaaaacggggttgtgggagagcaatacaagcggccgtgctgctaggcgaagc 2080
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 418 bits (211), Expect = e-114 Identities = 275/294 (93%), Gaps = 2/294 (0%) Strand = Plus / Plus Query: 1 gggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 60 |||||||||||||||||||||| | | |||||||||||||| || ||||||||||||||| Sbjct: 177052 gggtggatacctaggcacccagag-aggaggaagggcgtagtaatcgacgaaatgcttcg 177110 Query: 61 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 120 ||||||||||||| ||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 177111 gggagttgaaaatcagcatagatccggagattcccgaatagggcaacctttcgaactgc- 177169 Query: 121 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 180 ||||||||||||| |||||||||||| |||| |||||||||||| ||||||||||||||| Sbjct: 177170 tgctgaatccatgggcaggcaagagagaaccaggcgaactgaaagatcttagtagccaga 177229 Query: 181 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 240 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 177230 ggaaaagaaagcaaaagcgattcccgtagtagcggcgggcgaaatgggagctgcctaaac 177289 Query: 241 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 294 |||||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 177290 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgcagctaggcgaagc 177343 Score = 46.1 bits (23), Expect = 0.068 Identities = 23/23 (100%) Strand = Plus / Plus Query: 154 gcgaactgaaacatcttagtagc 176 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.068 Identities = 23/23 (100%) Strand = Plus / Plus Query: 154 gcgaactgaaacatcttagtagc 176 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 416 bits (210), Expect = e-113 Identities = 293/317 (92%), Gaps = 3/317 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 116187 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 116129 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| |||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 116128 ggagctgaaaataagtatagatccggagattcccgaataggttaacctttgaaactgc-t 116070 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 116069 gctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagag 116010 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 116009 gaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaacc 115950 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||| |||||||||| |||| | | ||| |||||| ||||||||||||| |||||| Sbjct: 115949 gtgaaaac-gggttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgag 115891 Query: 302 tgccgcaccctagatgg 318 | | ||||||||||||| Sbjct: 115890 tcctgcaccctagatgg 115874 Score = 416 bits (210), Expect = e-113 Identities = 293/317 (92%), Gaps = 3/317 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 85933 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 85991 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| |||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 85992 ggagctgaaaataagtatagatccggagattcccgaataggttaacctttgaaactgc-t 86050 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 86051 gctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagag 86110 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 86111 gaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaacc 86170 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 |||||||| |||||||||| |||| | | ||| |||||| ||||||||||||| |||||| Sbjct: 86171 gtgaaaac-gggttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgag 86229 Query: 302 tgccgcaccctagatgg 318 | | ||||||||||||| Sbjct: 86230 tcctgcaccctagatgg 86246
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 410 bits (207), Expect = e-111 Identities = 207/207 (100%) Strand = Plus / Plus Query: 114 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 173 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 174 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 234 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 294 cggttgagtgccgcaccctagatggct 320 ||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggct 207
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 402 bits (203), Expect = e-109 Identities = 246/258 (95%), Gaps = 2/258 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 79748 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 79690 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 79689 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 79631 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79630 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 79571 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 79570 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaacc 79511 Query: 242 gtgaaaacggggttgtgg 259 |||||||||||||||||| Sbjct: 79510 gtgaaaacggggttgtgg 79493
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 400 bits (202), Expect = e-108 Identities = 290/317 (91%), Gaps = 2/317 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgg 81 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| ||||||||||||| ||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 82 ggagctgaaaataagcatggatccggagattcccgaataggttaaccttttgaactgc-t 140 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 gctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagag 200 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 201 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagtagcctaaacc 260 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 301 ||||||||||||||||||| |||||| | |||||||| |||||||||||| ||||| Sbjct: 261 gtgaaaacggggttgtgggggagcaaagtaggcgttgtgtcgctaggcgaagcagttgaa 320 Query: 302 tgccgcaccctagatgg 318 | | ||||| ||||||| Sbjct: 321 tcctgcaccatagatgg 337
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 398 bits (201), Expect = e-108 Identities = 293/321 (91%), Gaps = 6/321 (1%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 81 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| |||||||||| || ||||||||||||||| ||||||| ||||||||||||||| | Sbjct: 82 ggagctgaaaataagtatggatccggagattcccgaataggttaaccttttaaactgc-t 140 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| ||| || |||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 141 gctgaattcataggcgggcaagagacaacccggcgaactgaaacatcttagtagccggag 200 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 201 gaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggagcggcctaaacc 260 Query: 242 gtgaaaacggggttgtgggagagcaatac----aagcgttgtgctgctaggcgaagcggt 297 ||||||||||||||||||| |||| |||| |||| ||| ||||||||||||||| || Sbjct: 261 gtgaaaacggggttgtgggggagctatacaaataagcattgcgctgctaggcgaagcagt 320 Query: 298 tgagtgccgcaccctagatgg 318 ||||| | |||||| |||||| Sbjct: 321 tgagtcctgcaccccagatgg 341
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 392 bits (198), Expect = e-106 Identities = 271/293 (92%), Gaps = 2/293 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | ||||||||||| |||| || |||||||||||||||| Sbjct: 22 ggtggatacctaggcacccagag-acgaggaagggtgtagtaatcgacgaaatgcttcgg 80 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||| |||||||| ||| || ||||||| | ||||| | Sbjct: 81 ggagttgaaaataagcatagatccgtagattcccgaatggggtaacctttcacactgc-t 139 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 gctcaatccatgggcaggaaagagacaacctggcgaactgaaacatcttagtagccagag 199 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 ||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 200 gaaaataaagcaaaagcgattcccatagtagcggcgagcgaaatgggatcagcctaaacc 259 Query: 242 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 294 | |||||||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 260 gcgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagc 312
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 392 bits (198), Expect = e-106 Identities = 210/213 (98%), Gaps = 1/213 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 75788 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 75846 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75847 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 75906 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75907 gcggaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 75966 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcg 214 ||||||||||||||||||||||||||||||||| Sbjct: 75967 gaaaagaaagcaaaagcgattcccgtagtagcg 75999 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 ggcgaactgaaacatcttag 172 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 381 bits (192), Expect = e-102 Identities = 204/207 (98%), Gaps = 1/207 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 75690 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 75632 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 75631 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 75572 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75571 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 75512 Query: 182 gaaaagaaagcaaaagcgattcccgta 208 ||||||||||||||||||||||||||| Sbjct: 75511 gaaaagaaagcaaaagcgattcccgta 75485 Score = 232 bits (117), Expect = 6e-58 Identities = 117/117 (100%) Strand = Plus / Minus Query: 204 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 264 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 320 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 75362 Score = 71.9 bits (36), Expect = 1e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 135 gcaggcaagagacaacctggcgaactgaaacatcttagta 174 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 381 bits (192), Expect = e-102 Identities = 204/207 (98%), Gaps = 1/207 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 381848 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 381906 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 381907 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 381966 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381967 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 382026 Query: 182 gaaaagaaagcaaaagcgattcccgta 208 ||||||||||||||||||||||||||| Sbjct: 382027 gaaaagaaagcaaaagcgattcccgta 382053 Score = 232 bits (117), Expect = 6e-58 Identities = 117/117 (100%) Strand = Plus / Plus Query: 204 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 264 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 320 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 382176 Score = 71.9 bits (36), Expect = 1e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 135 gcaggcaagagacaacctggcgaactgaaacatcttagta 174 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 1e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 135 gcaggcaagagacaacctggcgaactgaaacatcttagta 174 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 381 bits (192), Expect = e-102 Identities = 204/207 (98%), Gaps = 1/207 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 113781 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 113723 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 113722 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 113663 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113662 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 113603 Query: 182 gaaaagaaagcaaaagcgattcccgta 208 ||||||||||||||||||||||||||| Sbjct: 113602 gaaaagaaagcaaaagcgattcccgta 113576 Score = 232 bits (117), Expect = 6e-58 Identities = 117/117 (100%) Strand = Plus / Minus Query: 204 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 264 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 320 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 113453 Score = 71.9 bits (36), Expect = 1e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 135 gcaggcaagagacaacctggcgaactgaaacatcttagta 174 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 381 bits (192), Expect = e-102 Identities = 204/207 (98%), Gaps = 1/207 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 368463 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 368405 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 368404 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 368345 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368344 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 368285 Query: 182 gaaaagaaagcaaaagcgattcccgta 208 ||||||||||||||||||||||||||| Sbjct: 368284 gaaaagaaagcaaaagcgattcccgta 368258 Score = 381 bits (192), Expect = e-102 Identities = 204/207 (98%), Gaps = 1/207 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 185068 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 185010 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 185009 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 184950 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184949 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 184890 Query: 182 gaaaagaaagcaaaagcgattcccgta 208 ||||||||||||||||||||||||||| Sbjct: 184889 gaaaagaaagcaaaagcgattcccgta 184863 Score = 232 bits (117), Expect = 6e-58 Identities = 117/117 (100%) Strand = Plus / Minus Query: 204 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 264 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 320 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 368135 Score = 232 bits (117), Expect = 6e-58 Identities = 117/117 (100%) Strand = Plus / Minus Query: 204 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 264 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 320 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 184740 Score = 71.9 bits (36), Expect = 1e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 135 gcaggcaagagacaacctggcgaactgaaacatcttagta 174 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 375 bits (189), Expect = e-101 Identities = 295/319 (92%), Gaps = 15/319 (4%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 711 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 653 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||||| ||||||||||||||||| ||||||||| ||| |||| || Sbjct: 652 ggagttgaaaataagcgtagatccggagattcccgaataggtca--ctt---gactg-ct 599 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||||||||| |||||||||||||| || |||| ||| |||||||||||||||||| Sbjct: 598 gctgaatccatg-gcaggcaagagaca--ct-gcga--tga-acatcttagtagccagag 546 Query: 182 gaaaagaaa-gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 gaaaagaaaggcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 486 Query: 241 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 300 ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| || Sbjct: 485 cgtgaaaacggggttgtgggagagcgatacaagcgtcgtgctgctaggcgaagcggtgga 426 Query: 301 gtgccgcaccctagatggc 319 |||| |||||||||||||| Sbjct: 425 gtgctgcaccctagatggc 407
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 353 bits (178), Expect = 2e-94 Identities = 203/210 (96%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 85 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 144 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 145 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 205 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 265 caatacaagcgttgtgctgctaggcgaagc 294 |||||||||||| ||||||||||||||||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagc 304
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 347 bits (175), Expect = 1e-92 Identities = 206/215 (95%), Gaps = 1/215 (0%) Strand = Plus / Minus Query: 105 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 164 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 165 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 225 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 284 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 285 taggcgaagcggttgagtgccgcaccctagatggc 319 |||||||||| || || ||| |||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggc 122
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 331 bits (167), Expect = 8e-88 Identities = 173/175 (98%) Strand = Plus / Plus Query: 120 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 179 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 180 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 240 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc 294 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagc 191
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 291 bits (147), Expect = 7e-76 Identities = 219/242 (90%), Gaps = 1/242 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgg 81 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| ||| || |||||| ||||||||||| ||| |||||| ||||| || ||||||| Sbjct: 82 ggagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcct 141 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142 gctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagag 201 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 202 gaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaacc 261 Query: 242 gt 243 || Sbjct: 262 gt 263
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 287 bits (145), Expect = 1e-74 Identities = 160/164 (97%), Gaps = 1/164 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 1567 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 1625 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1626 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 1685 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaac 165 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1686 gctgaatccatgagcaggcaagagacaacctggcgaactgaaac 1729
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 285 bits (144), Expect = 4e-74 Identities = 234/263 (88%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||| ||||||||| |||| |||||||||||||||| Sbjct: 143941 ggtggatacctaggcacccagag-acgaagaagggcgtggcaaacgacgaaatgcttcgg 143999 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| ||||||| | |||||||||||||||||| ||||||| |||||| ||||||||| Sbjct: 144000 ggagccgaaaataggtatagatccggagattcccgaataggttaaccttccaaactgcct 144059 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| || ||||| |||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 144060 gctgaattcagaagcagacaagagacaacccggcgaactgaaacatcttagtagccggag 144119 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 || | |||||||||||||||||| ||||| ||||||| |||| |||| |||||||||| Sbjct: 144120 gaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaacc 144179 Query: 242 gtgaaaacggggttgtgggagag 264 ||||| ||||||||||||||||| Sbjct: 144180 gtgaagacggggttgtgggagag 144202 Score = 285 bits (144), Expect = 4e-74 Identities = 234/263 (88%), Gaps = 1/263 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||| ||||||||| |||| |||||||||||||||| Sbjct: 88910 ggtggatacctaggcacccagag-acgaagaagggcgtggcaaacgacgaaatgcttcgg 88852 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| ||||||| | |||||||||||||||||| ||||||| |||||| ||||||||| Sbjct: 88851 ggagccgaaaataggtatagatccggagattcccgaataggttaaccttccaaactgcct 88792 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| || ||||| |||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 88791 gctgaattcagaagcagacaagagacaacccggcgaactgaaacatcttagtagccggag 88732 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 || | |||||||||||||||||| ||||| ||||||| |||| |||| |||||||||| Sbjct: 88731 gaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaacc 88672 Query: 242 gtgaaaacggggttgtgggagag 264 ||||| ||||||||||||||||| Sbjct: 88671 gtgaagacggggttgtgggagag 88649
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 281 bits (142), Expect = 7e-73 Identities = 217/241 (90%), Gaps = 1/241 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||| Sbjct: 127 ggtggatacctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgg 185 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 | || ||| || |||||| ||||||||||| ||| |||||| ||||| || ||||||| Sbjct: 186 gaagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcct 245 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 gctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagag 305 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 306 gaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaacc 365 Query: 242 g 242 | Sbjct: 366 g 366
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 280 bits (141), Expect = 3e-72 Identities = 217/242 (89%), Gaps = 1/242 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 || ||| |||||||||||||| | |||| ||||||||||||||||||||||||||||||| Sbjct: 10 ggyggagacctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgg 68 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| ||| || |||||| ||||||||||| ||| |||||| ||||| || ||||||| Sbjct: 69 ggagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcct 128 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 gctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagag 188 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 189 gaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaacc 248 Query: 242 gt 243 || Sbjct: 249 gt 250
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 280 bits (141), Expect = 3e-72 Identities = 234/264 (88%), Gaps = 1/264 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||| ||||||||| | ||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcgg 81 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| || || ||||||||||||| ||| ||| |||||| |||||| || ||| | | Sbjct: 82 ggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactactt 141 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||||| Sbjct: 142 gctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccagag 201 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 202 gaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaacc 261 Query: 242 gtgaaaacggggttgtgggagagc 265 | |||| ||||||||||||||||| Sbjct: 262 gcgaaagcggggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 280 bits (141), Expect = 3e-72 Identities = 234/264 (88%), Gaps = 1/264 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||| ||||||||| | ||||||||||||||||||| Sbjct: 125242 ggtggatacctaggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcgg 125184 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| || || ||||||||||||| ||| ||| |||||| |||||| || ||| | | Sbjct: 125183 ggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactactt 125124 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||||| Sbjct: 125123 gctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccagag 125064 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 125063 gaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaacc 125004 Query: 242 gtgaaaacggggttgtgggagagc 265 | |||| ||||||||||||||||| Sbjct: 125003 gcgaaagcggggttgtgggagagc 124980 Score = 280 bits (141), Expect = 3e-72 Identities = 234/264 (88%), Gaps = 1/264 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||| ||||||||| | ||||||||||||||||||| Sbjct: 94624 ggtggatacctaggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcgg 94682 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| || || ||||||||||||| ||| ||| |||||| |||||| || ||| | | Sbjct: 94683 ggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactactt 94742 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||||| Sbjct: 94743 gctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccagag 94802 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 94803 gaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaacc 94862 Query: 242 gtgaaaacggggttgtgggagagc 265 | |||| ||||||||||||||||| Sbjct: 94863 gcgaaagcggggttgtgggagagc 94886
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 274 bits (138), Expect = 2e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 26 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 85 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434061 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19434002 Query: 86 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 145 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19434001 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19433942 Query: 146 acaacctggcgaactgaaacat 167 |||||||||||||||||||||| Sbjct: 19433941 acaacctggcgaactgaaacat 19433920
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 274 bits (138), Expect = 2e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 26 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 85 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51588 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 51529 Query: 86 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 145 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 51528 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 51469 Query: 146 acaacctggcgaactgaaacat 167 |||||||||||||||||||||| Sbjct: 51468 acaacctggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 274 bits (138), Expect = 2e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 26 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 85 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119552 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119493 Query: 86 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 145 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119492 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119433 Query: 146 acaacctggcgaactgaaacat 167 |||||||||||||||||||||| Sbjct: 119432 acaacctggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 274 bits (138), Expect = 2e-70 Identities = 141/142 (99%) Strand = Plus / Plus Query: 26 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 85 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6070 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 6129 Query: 86 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 145 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 6130 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 6189 Query: 146 acaacctggcgaactgaaacat 167 |||||||||||||||||||||| Sbjct: 6190 acaacctggcgaactgaaacat 6211
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 270 bits (136), Expect = 3e-69 Identities = 200/220 (90%), Gaps = 1/220 (0%) Strand = Plus / Minus Query: 100 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 159 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 160 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 220 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 279 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 280 gctgctaggcgaagcggttgagtgccgcaccctagatggc 319 || ||||||| ||||||| ||||| |||||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggc 3477 Score = 81.8 bits (41), Expect = 1e-12 Identities = 77/88 (87%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||| |||||||| | |||||||||||| ||| |||||||||||||||| | Sbjct: 3780 ggtggatacctatgcacccagag-acgaggaagggcatagttagcgacgaaatgcttcag 3722 Query: 62 ggagttgaaaataagcatagatccggag 89 |||||| |||||||| |||||| |||| Sbjct: 3721 agagttgcaaataagcgtagatcaggag 3694
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 266 bits (134), Expect = 4e-68 Identities = 134/134 (100%) Strand = Plus / Plus Query: 187 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 246 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 247 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 307 caccctagatggct 320 |||||||||||||| Sbjct: 121 caccctagatggct 134
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 262 bits (132), Expect = 6e-67 Identities = 185/200 (92%), Gaps = 2/200 (1%) Strand = Plus / Minus Query: 44 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 103 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 104 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 163 |||||||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 164 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 223 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6394 acatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaa 6335 Query: 224 atgggagcagcctaaaccgt 243 |||||||||||||||||||| Sbjct: 6334 atgggagcagcctaaaccgt 6315 Score = 91.7 bits (46), Expect = 1e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 245 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 304 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 305 cgcaccctagatgg 318 ||||||||||||| Sbjct: 6224 tgcaccctagatgg 6211
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 262 bits (132), Expect = 6e-67 Identities = 132/132 (100%) Strand = Plus / Plus Query: 189 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 249 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 309 ccctagatggct 320 |||||||||||| Sbjct: 121 ccctagatggct 132
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 262 bits (132), Expect = 6e-67 Identities = 132/132 (100%) Strand = Plus / Plus Query: 189 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 249 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 309 ccctagatggct 320 |||||||||||| Sbjct: 121 ccctagatggct 132
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 260 bits (131), Expect = 2e-66 Identities = 131/131 (100%) Strand = Plus / Plus Query: 190 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 250 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 310 cctagatggct 320 ||||||||||| Sbjct: 121 cctagatggct 131
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 260 bits (131), Expect = 2e-66 Identities = 131/131 (100%) Strand = Plus / Plus Query: 190 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 250 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 310 cctagatggct 320 ||||||||||| Sbjct: 124 cctagatggct 134
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 256 bits (129), Expect = 4e-65 Identities = 129/129 (100%) Strand = Plus / Plus Query: 192 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 252 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 312 tagatggct 320 ||||||||| Sbjct: 121 tagatggct 129
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 254 bits (128), Expect = 2e-64 Identities = 181/195 (92%), Gaps = 3/195 (1%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaa-tgcttcg 60 |||||||||| |||||||||| | ||||||||| |||||| ||||||||||| ||||||| Sbjct: 89860 ggtggataccaaggcacccagag-acgaggaagagcgtagtaagcgacgaaaatgcttcg 89802 Query: 61 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 120 ||||||||||||||||| |||||||||||||||| ||||||| |||||||| |||||| Sbjct: 89801 gggagttgaaaataagcgtagatccggagattccggaataggttaaccttttgaactgc- 89743 Query: 121 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 180 ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 89742 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccaga 89683 Query: 181 ggaaaagaaagcaaa 195 ||||||||||||||| Sbjct: 89682 ggaaaagaaagcaaa 89668
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 254 bits (128), Expect = 2e-64 Identities = 181/195 (92%), Gaps = 3/195 (1%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaa-tgcttcg 60 |||||||||| |||||||||| | ||||||||| |||||| ||||||||||| ||||||| Sbjct: 410 ggtggataccaaggcacccagag-acgaggaagagcgtagtaagcgacgaaaatgcttcg 468 Query: 61 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 120 ||||||||||||||||| |||||||||||||||| ||||||| |||||||| |||||| Sbjct: 469 gggagttgaaaataagcgtagatccggagattccggaataggttaaccttttgaactgc- 527 Query: 121 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 180 ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 528 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccaga 587 Query: 181 ggaaaagaaagcaaa 195 ||||||||||||||| Sbjct: 588 ggaaaagaaagcaaa 602
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 228 bits (115), Expect = 9e-57 Identities = 226/262 (86%), Gaps = 1/262 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||||| |||| | |||| ||||||||||| ||||||||||||||||||| Sbjct: 23 ggtggatacctaggcatccagag-acgaagaagggcgtagtaagcgacgaaatgcttcgg 81 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| || || ||| ||||||||| |||||||| |||||| |||||| || ||| ||| Sbjct: 82 ggagctgcgaacaagtatagatccgaagattcccgaatagggcaacctcttgtactacct 141 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 | ||| ||| | |||| ||||| ||||| | ||||||||||||||||||||| |||| Sbjct: 142 gtaaaatacataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagag 201 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 ||| | |||||||||||||||||| |||||| ||||||||||| |||| ||||||||||| Sbjct: 202 gaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaacc 261 Query: 242 gtgaaaacggggttgtgggaga 263 |||||| ||||||||||||||| Sbjct: 262 gtgaaagcggggttgtgggaga 283
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 228 bits (115), Expect = 9e-57 Identities = 209/238 (87%), Gaps = 2/238 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| || ||| | |||| ||||||||||| ||||||||||||||||||| Sbjct: 4056 ggtggatacctaggtactcagag-acgaagaagggcgtagtaagcgacgaaatgcttcgg 4114 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||| ||||| | |||||||||||||||||||| ||| || |||| || |||||| Sbjct: 4115 ggagtcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc- 4173 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||||||| || | |||||| ||||||| |||||||||||||||||||||||||| Sbjct: 4174 gctgaatccataggcggataagagagaacctggtgaactgaaacatcttagtagccagag 4233 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 239 ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 4234 gaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 228 bits (115), Expect = 9e-57 Identities = 209/238 (87%), Gaps = 2/238 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| || ||| | |||| ||||||||||| ||||||||||||||||||| Sbjct: 23 ggtggatacctaggtactcagag-acgaagaagggcgtagtaagcgacgaaatgcttcgg 81 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||| ||||| | |||||||||||||||||||| ||| || |||| || |||||| Sbjct: 82 ggagtcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc- 140 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||||||| || | |||||| ||||||| |||||||||||||||||||||||||| Sbjct: 141 gctgaatccataggcggataagagagaacctggtgaactgaaacatcttagtagccagag 200 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 239 ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 201 gaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 220 bits (111), Expect = 2e-54 Identities = 208/238 (87%), Gaps = 2/238 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| || ||| | |||| ||||||||||| ||||||||||||||||||| Sbjct: 23 ggtggatacctaggtactcagag-acgaagaagggcgtagtaagcgacgaaatgcttcgg 81 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||| ||||| | |||||||||||||||||||| ||| || |||| || |||||| Sbjct: 82 ggagtcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc- 140 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| ||| || | |||||| ||||||| |||||||||||||||||||||||||| Sbjct: 141 gctgaatacataggcggataagagagaacctggtgaactgaaacatcttagtagccagag 200 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 239 ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 201 gaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 212 bits (107), Expect = 5e-52 Identities = 224/262 (85%), Gaps = 1/262 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||||| |||| | |||| ||||||||||| |||||||||||||||| || Sbjct: 3057 ggtggatacctaggcatccagag-acgaagaagggcgtagtaagcgacgaaatgctttgg 3115 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| || || ||| ||||||||| |||||||| |||||| |||||| || ||| ||| Sbjct: 3116 ggagctgcgaacaagtatagatccgaagattcccgaatagggcaacctcttgtactacct 3175 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 | ||| ||| |||| ||||| ||||| | ||||||||||||||||||||| |||| Sbjct: 3176 gtaaaatacatagtcaggttagagaaaacctagtgaactgaaacatcttagtagctagag 3235 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 ||| | |||||||||||||||||| |||||| ||||||||||| |||| ||||||||||| Sbjct: 3236 gaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaacc 3295 Query: 242 gtgaaaacggggttgtgggaga 263 |||||| ||||||||||||||| Sbjct: 3296 gtgaaagcggggttgtgggaga 3317
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 208 bits (105), Expect = 8e-51 Identities = 222/260 (85%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||||| |||| | |||| ||||||||||| |||||||||||||||||| Sbjct: 23 ggtggatacctaggcatccagag-acgaagaagggcgtagtcagcgacgaaatgcttcgg 81 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| || || ||||||| ||||| |||||||| |||||| ||||| || ||| ||| Sbjct: 82 ggagctgcgaacaagcataaatccgaagattcccgaatagggtaacctcttgtactacct 141 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 | |||| || | |||| ||||| ||||| | ||||||||||||||||||||| |||| Sbjct: 142 gtagaattaataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagag 201 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||| ||||| ||||||||||| |||| ||||||||||| Sbjct: 202 gaaaagaaagcaaaagcgattccctcagtagtggcgagcgaaacgggaacagcctaaacc 261 Query: 242 gtgaaaacggggttgtggga 261 | |||| ||||||||||||| Sbjct: 262 gcgaaagcggggttgtggga 281
>gb|AF482503.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 906 Score = 200 bits (101), Expect = 2e-48 Identities = 164/184 (89%), Gaps = 1/184 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||| |||||||||| || |||||||| ||||||| Sbjct: 724 ggtggatacctaggcacccagag-acgaagaagggcgtactaaccgacgaaacgcttcgg 782 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| |||||| |||||| ||||||||||||||| |||||| |||||| || |||| ||| Sbjct: 783 ggagctgaaaagaagcattgatccggagattcccgaatagggcaacctcttgaacttcct 842 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 843 gctgaattcataggcaggatagagacaacctggcgaactgaaacatcttagtagccagag 902 Query: 182 gaaa 185 |||| Sbjct: 903 gaaa 906
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 198 bits (100), Expect = 8e-48 Identities = 207/239 (86%), Gaps = 3/239 (1%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| || ||| | |||| ||||||||||| ||||||||||| ||||||| Sbjct: 23 ggtggatacctaggtactcagag-acgaagaagggcgtagtaagcgacgaaacgcttcgg 81 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct-tttaaactgcc 120 ||||| ||||| | | ||||||||||||||||| ||| || |||| ||| |||||| Sbjct: 82 ggagtcgaaaacagacgtagatccggagattcccgaatggggtaacccctttgtactgcc 141 Query: 121 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 180 ||||||| ||| ||| | |||||||||||||| ||||||||||||||||||| ||||| Sbjct: 142 -gctgaattcataagcggataagagacaacctggtgaactgaaacatcttagtaaccaga 200 Query: 181 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 239 |||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 201 ggaaaagaaagcaaaagcgatttcctgagtagcggcgagcgaaatgggagaagcctaaa 259
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 192 bits (97), Expect = 5e-46 Identities = 220/260 (84%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||||| |||| | |||| ||||||||||| ||||||||||||||||||| Sbjct: 1790 ggtggatacctaggcatccagag-acgaagaagggcgtagtaagcgacgaaatgcttcgg 1848 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| || || ||| ||| ||||| |||||||| |||||| ||||| || ||| ||| Sbjct: 1849 ggagctgcgaacaagtataaatccgaagattcccgaatagggtaacctcttgtactacct 1908 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 | |||| || | |||| ||||| ||||| | ||||||||||||||||||||| |||| Sbjct: 1909 gtataatcaataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagag 1968 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 ||| | |||||||||||||||||| |||||| ||||||||||| |||| | ||||||||| Sbjct: 1969 gaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaaccgcctaaacc 2028 Query: 242 gtgaaaacggggttgtggga 261 || ||| ||||||||||||| Sbjct: 2029 gttaaagcggggttgtggga 2048
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 184 bits (93), Expect = 1e-43 Identities = 204/240 (85%), Gaps = 1/240 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||||| |||| | |||| |||||||||| || |||||||| ||| ||| Sbjct: 115653 ggtggatacctaggcatccagag-acgacgaagggcgtactaatcgacgaaacgctccgg 115595 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 | || ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| | Sbjct: 115594 gaagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctcc 115535 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| || || | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 115534 gctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccagag 115475 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 115474 gaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 184 bits (93), Expect = 1e-43 Identities = 204/240 (85%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||||| |||| | |||| |||||||||| || |||||||| ||| ||| Sbjct: 86335 ggtggatacctaggcatccagag-acgacgaagggcgtactaatcgacgaaacgctccgg 86393 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 | || ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| | Sbjct: 86394 gaagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctcc 86453 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| || || | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 86454 gctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccagag 86513 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 86514 gaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 184 bits (93), Expect = 1e-43 Identities = 185/212 (87%), Gaps = 4/212 (1%) Strand = Plus / Plus Query: 31 gaagggcgtagcaagcgacgaaatgct-tcggggagttgaaaataagcatagatccggag 89 |||||||||| |||||||||||||||| |||| |||| || |||| || ||||||||| Sbjct: 7 gaagggcgtaacaagcgacgaaatgctctcggagagtcgagaataggct--gatccggag 64 Query: 90 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 149 || ||| |||||| ||||| |||||||| |||||||| || |||| | ||||| || Sbjct: 65 atccccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgagagataa 123 Query: 150 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 124 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctcag 183 Query: 210 tagcggcgagcgaaatgggagcagcctaaacc 241 ||| |||||||||||||||| ||||||||||| Sbjct: 184 tagtggcgagcgaaatgggaacagcctaaacc 215
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 182 bits (92), Expect = 5e-43 Identities = 218/255 (85%), Gaps = 4/255 (1%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | | || ||||||| || || || |||||||||||| Sbjct: 21 ggtggatacctaggcacccaggg-atgaagaagggcataataattgatgaaatgcttcgg 79 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||| ||||||| ||||||||||||||||||| ||||||| ||||||| |||||| || Sbjct: 80 ggagttaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ct 138 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||| | |||||| |||| ||| ||| ||||||| |||||||| ||||||||||| ||||| Sbjct: 139 gcttattccatg-gcagacaaaaga-aacctggtgaactgaatcatcttagtagacagag 196 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 ||||| |||||||||| ||| || |||||| |||||| |||| |||| ||||||||||| Sbjct: 197 gaaaataaagcaaaagttattaccatagtagtggcgagtgaaaagggaacagcctaaacc 256 Query: 242 gtgaaaacggggttg 256 | |||| ||||||| Sbjct: 257 gctaaaatggggttg 271
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 178 bits (90), Expect = 7e-42 Identities = 96/98 (97%) Strand = Plus / Plus Query: 197 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 256 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 257 tgggagagcaatacaagcgttgtgctgctaggcgaagc 294 |||||||||||||||||||| ||||||||||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagc 98
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 176 bits (89), Expect = 3e-41 Identities = 206/242 (85%), Gaps = 4/242 (1%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||| |||| || |||| ||||||||||| ||||||||||||||||||| Sbjct: 426 ggtggatacctagacacctaga-aacgatgaagggcgtagaaagcgacgaaatgcttcgg 484 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 | || || ||| || | |||||||||||| |||||| |||||| | ||||||| | Sbjct: 485 ttaactgcgaacaag--taaacccggagattcccgaatagggcaacctgt-aaactgctt 541 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| ||| || | |||||||||||||| ||||||||||||||||||| |||||| Sbjct: 542 gctgaattcataggcgagtaagagacaacctggtgaactgaaacatcttagtaaccagag 601 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 ||| |||||||||||||||||||| |||||| ||||||||||| |||| ||||||||||| Sbjct: 602 gaacagaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaacc 661 Query: 242 gt 243 || Sbjct: 662 gt 663
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 174 bits (88), Expect = 1e-40 Identities = 205/241 (85%), Gaps = 3/241 (1%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 || ||| |||||||||| ||| | |||| ||||||||| | || | |||||||||||||| Sbjct: 10 ggyggagacctaggcactcagag-acgaagaagggcgtggaaaccaacgaaatgcttcgg 68 Query: 62 ggagttgaaaataagc-atagatccggagattcccaaataggtcaaccttttaaactgcc 120 |||| || ||| |||| ||| |||||||||||||| |||||| |||||| || ||| || Sbjct: 69 ggagctggaaacaagctata-atccggagattcccgaatagggcaacctcttgtactacc 127 Query: 121 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 180 | ||||| ||| ||| ||||||||||| || ||| |||||||||||||||||| || Sbjct: 128 tattgaattcatagataggaaagagacaacccggtgaattgaaacatcttagtagccgga 187 Query: 181 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 240 ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 188 ggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaatgggaacagcctaaac 247 Query: 241 c 241 | Sbjct: 248 c 248
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 172 bits (87), Expect = 4e-40 Identities = 202/240 (84%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 || ||| ||||||||| |||| | |||| |||||||||| || |||||||| ||| ||| Sbjct: 10 ggyggagacctaggcatccagag-acgacgaagggcgtactaatcgacgaaacgctccgg 68 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 | || ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| | Sbjct: 69 gaagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctcc 128 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| || || | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 129 gctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccagag 188 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 189 gaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF141148.1|AF141148 Vigna unguiculata clone VU53KNF3-2 16S ribsomal RNA gene; partial sequence, tRNA-Ile gene; complete sequence, and 18S ribosomal RNA gene; partial sequence; chloroplast genes for chloroplast products Length = 387 Score = 165 bits (83), Expect = 1e-37 Identities = 121/130 (93%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 136 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 78 Query: 62 ggagttgaaaataagcatagatccggagattccc-aaataggtcaaccttttaaactgcc 120 |||||||||||||||| ||||||||||||||||| | |||||||||||||| ||||| | Sbjct: 77 ggagttgaaaataagcgtagatccggagattcccgatataggtcaacctttcgaactg-c 19 Query: 121 tgctgaatcc 130 |||||||||| Sbjct: 18 tgctgaatcc 9
>gb|AF142335.1|AF142335 Vigna vexillata clone TVBA27 putative ribosomal RNA genomic sequence Length = 383 Score = 165 bits (83), Expect = 1e-37 Identities = 121/130 (93%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 130 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 72 Query: 62 ggagttgaaaataagcatagatccggagattccc-aaataggtcaaccttttaaactgcc 120 |||||||||||||||| ||||||||||||||||| | |||||||||||||| ||||| | Sbjct: 71 ggagttgaaaataagcgtagatccggagattcccgatataggtcaacctttcgaactg-c 13 Query: 121 tgctgaatcc 130 |||||||||| Sbjct: 12 tgctgaatcc 3
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 163 bits (82), Expect = 4e-37 Identities = 202/241 (83%), Gaps = 1/241 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||||||| || | |||| ||||||||| | | |||||| | ||| ||| Sbjct: 10 ggtggatacctaggcacctagag-acgaagaagggcgtcactaccgacgatacgctccgg 68 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| || || ||||| | ||||||||||||||| ||| || |||||| ||| ||| Sbjct: 69 ggagctggaagtaagcttcgatccggagattcccgaatggggcaacctcaaggactccct 128 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||||| ||| ||||| |||| |||| || |||||||||||||||||||||| ||| Sbjct: 129 gctgaattcataggcagggtagaggaaacccggtgaactgaaacatcttagtagccggag 188 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 189 gaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaacgggaccagcctaaacc 248 Query: 242 g 242 | Sbjct: 249 g 249
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 161 bits (81), Expect = 2e-36 Identities = 183/217 (84%) Strand = Plus / Plus Query: 26 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 85 |||| ||||||||| | || |||||||| |||||| |||| || ||| ||||| ||| | Sbjct: 26 acgatgaagggcgtggaaaccgacgaaacgcttcgaggagctggaaacaagcaatgattc 85 Query: 86 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 145 |||||||||| |||||| |||||| || ||| ||| ||||| ||| ||| ||||| Sbjct: 86 ggagattcccgaatagggcaacctcttgtacttccttttgaattcatagaaaggaaagag 145 Query: 146 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 205 |||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 146 acaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattccc 205 Query: 206 gtagtagcggcgagcgaaatgggagcagcctaaaccg 242 |||||||||||||||||| ||||| ||| |||||||| Sbjct: 206 gtagtagcggcgagcgaactgggaacagtctaaaccg 242
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 161 bits (81), Expect = 2e-36 Identities = 111/120 (92%), Gaps = 1/120 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||| ||||||||| |||||||||||| || Sbjct: 24063480 ggtggatacctaggtacccagag-acgaggaaggacgtagcaagagacgaaatgctttgg 24063422 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 24063421 ggagttgaaaataatcatagatccggagattcccaaataggtcaacattttgaactgcct 24063362
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 161 bits (81), Expect = 2e-36 Identities = 111/120 (92%), Gaps = 1/120 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||| ||||||||| |||||||||||| || Sbjct: 23991686 ggtggatacctaggtacccagag-acgaggaaggacgtagcaagagacgaaatgctttgg 23991628 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 23991627 ggagttgaaaataatcatagatccggagattcccaaataggtcaacattttgaactgcct 23991568
>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 176388 Score = 161 bits (81), Expect = 2e-36 Identities = 111/120 (92%), Gaps = 1/120 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||| |||||| | |||||||||| ||||||||| |||||||||||| || Sbjct: 23916 ggtggatacctaggtacccagag-acgaggaaggacgtagcaagagacgaaatgctttgg 23974 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 23975 ggagttgaaaataatcatagatccggagattcccaaataggtcaacattttgaactgcct 24034
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 159 bits (80), Expect = 7e-36 Identities = 179/212 (84%) Strand = Plus / Plus Query: 31 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 90 ||||||||||| | |||||| | ||||||||||| || || |||| | |||||| ||| Sbjct: 38 gaagggcgtagttaccgacgatacgcttcggggagctggaatcaagctttgatccgaaga 97 Query: 91 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 150 ||||| |||||| ||||||| || ||| |||| ||||| ||| |||| |||||||||| Sbjct: 98 ttcccgaatagggcaaccttatatacttcctgttgaattcatagacaggtaagagacaac 157 Query: 151 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 210 | |||||| |||||||||||||||||| | ||||||||||||||| ||||||||| |||| Sbjct: 158 ccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattcccttagt 217 Query: 211 agcggcgagcgaaatgggagcagcctaaaccg 242 || ||||||||||| |||| ||| |||||||| Sbjct: 218 agtggcgagcgaaaagggatcagtctaaaccg 249
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 159 bits (80), Expect = 7e-36 Identities = 98/104 (94%) Strand = Plus / Plus Query: 139 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 198 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 199 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 242 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 69.9 bits (35), Expect = 5e-09 Identities = 77/90 (85%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||||| | || | |||||||||||||| | | |||||||||||||||| Sbjct: 23 ggtggatacctaggcatctagag-acgaggaagggcgtggttaccgacgaaatgcttcgg 81 Query: 62 ggagttgaaaataagcatagatccggagat 91 ||||||| ||| | || |||||||||||| Sbjct: 82 ggagttggaaagaggctgagatccggagat 111
>gb|AF141147.1|AF141147 Vigna unguiculata clone VU53KNF3-1 16S ribosomal RNA gene, and 18S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 370 Score = 159 bits (80), Expect = 7e-36 Identities = 105/111 (94%), Gaps = 2/111 (1%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 136 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 78 Query: 62 ggagttgaaaataagcatagatccggagattccc-aaataggtcaaccttt 111 |||||||||||||||| ||||||||||||||||| | |||||||||||||| Sbjct: 77 ggagttgaaaataagcgtagatccggagattcccgatataggtcaaccttt 27
>emb|X00012.1|CHSORN1 Spirodela oligorhiza chloroplast 5' end of gene for 23S rRNA Length = 200 Score = 157 bits (79), Expect = 3e-35 Identities = 97/102 (95%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 100 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgt 158 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggt 103 |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 159 ggagttgaaaataagcatagatccggagattcccgaataggt 200
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 155 bits (78), Expect = 1e-34 Identities = 217/256 (84%), Gaps = 7/256 (2%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | | || ||||||| || || || ||||||||| || Sbjct: 21 ggtggatacctaggcacccaggg-atgaagaagggcataataattgatgaaatgctttgg 79 Query: 62 ggagttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcc 120 |||||| |||| ||| ||||||||||||||||||| ||||||| ||||||| |||||| Sbjct: 80 ggagttaaaaaataaacatagatccggagattcccgaataggtaaaccttt--aactgc- 136 Query: 121 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 180 |||| | |||||| |||| ||||||| ||||||| ||||||||||||||||||||||||| Sbjct: 137 tgcttattccatg-gcagacaagaga-aacctggtgaactgaaacatcttagtagccaga 194 Query: 181 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 240 |||||| |||||||||| |||||| |||||| ||| | |||| |||| ||||||||| Sbjct: 195 ggaaaataaagcaaaagttattcccatagtagtggcaaatgaaaagggaacagcctaaat 254 Query: 241 cgtgaaaacggggttg 256 || |||| ||||||| Sbjct: 255 cgctaaaatggggttg 270
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 155 bits (78), Expect = 1e-34 Identities = 166/190 (87%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 50 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 108 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 109 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 168 ||| ||||||| |||| | |||||| | || ||||||| |||| |||||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggcgaactgaaacatc 184 Query: 169 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 228 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 229 agcagcctaa 238 | || ||||| Sbjct: 245 aacaacctaa 254
>dbj|AK111146.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-E08, full insert sequence Length = 953 Score = 155 bits (78), Expect = 1e-34 Identities = 78/78 (100%) Strand = Plus / Plus Query: 195 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 62 Query: 255 tgtgggagagcaatacaa 272 |||||||||||||||||| Sbjct: 63 tgtgggagagcaatacaa 80
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 155 bits (78), Expect = 1e-34 Identities = 90/94 (95%) Strand = Plus / Plus Query: 148 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 207 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| | Sbjct: 1911 aacctggcgaactgaaacatcttagtaaccagaggaaaataaagcaaaagcgattccctt 1970 Query: 208 agtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||| ||||||||||| Sbjct: 1971 agtagcggcgagcgaaatgggaacagcctaaacc 2004
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 153 bits (77), Expect = 4e-34 Identities = 200/235 (85%), Gaps = 5/235 (2%) Strand = Plus / Plus Query: 5 ggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgggga 64 |||||||||||||||||| | ||| ||||||| || || || ||||||||||||||| Sbjct: 24 ggatacctaggcacccagggt-cgaagaagggcataataattgatgaaatgcttcgggga 82 Query: 65 gttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgc 123 ||| |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| ||| Sbjct: 83 gttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgc 141 Query: 124 tgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagga 183 | | |||||| | || ||||||| |||| || ||||||||||||||||||| |||||||| Sbjct: 142 ttattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagagga 199 Query: 184 aaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 238 ||| |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 200 aaataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254
>gb|L49156.1|PDICPRGOL Pediastrum biradiatum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 4173 Score = 151 bits (76), Expect = 2e-33 Identities = 94/100 (94%) Strand = Plus / Plus Query: 142 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 201 ||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 147 agagaaaacctggtgaactgaaacatctcagtagccagaggaaaagaaagcaaaagcgat 206 Query: 202 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 ||||||||||||||||||||||| ||| ||||||||||| Sbjct: 207 tcccgtagtagcggcgagcgaaacggggccagcctaaacc 246
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 151 bits (76), Expect = 2e-33 Identities = 222/268 (82%), Gaps = 11/268 (4%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||||||||| | |||||||||||||||||| ||||| |||||||||| Sbjct: 139247 ggtggatacctaggcacccaaag-acgaggaagggcgtagcaggcgac--aatgcttcgg 139191 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 | || | |||||||||||||||||||| ||| ||| ||| |||| || ||||||| Sbjct: 139190 gaagccagagataagcatagatccggagatccccgaatgggttaaccccttgaactgcc- 139132 Query: 122 gctgaatccatgagcagg----caagagacaacctggcgaactgaaacatcttagtagcc 177 ||||||||| | || |||||||| ||| ||||||| |||||||| | ||||| Sbjct: 139131 ---gaatccatgggatgggcggcaagagacgacccggcgaaccgaaacatccaaatagcc 139075 Query: 178 agaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagccta 237 | |||| |||| |||||||||||||||| |||||||||||||||| ||||| |||||| Sbjct: 139074 gggggaagagaaggcaaaagcgattcccgcagtagcggcgagcgaagagggagtagccta 139015 Query: 238 aaccgtgaaaacggggttgtgggagagc 265 ||||||| ||||||||||||||||||| Sbjct: 139014 aaccgtgggaacggggttgtgggagagc 138987 Score = 151 bits (76), Expect = 2e-33 Identities = 222/268 (82%), Gaps = 11/268 (4%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||||||||| | |||||||||||||||||| ||||| |||||||||| Sbjct: 82630 ggtggatacctaggcacccaaag-acgaggaagggcgtagcaggcgac--aatgcttcgg 82686 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 | || | |||||||||||||||||||| ||| ||| ||| |||| || ||||||| Sbjct: 82687 gaagccagagataagcatagatccggagatccccgaatgggttaaccccttgaactgcc- 82745 Query: 122 gctgaatccatgagcagg----caagagacaacctggcgaactgaaacatcttagtagcc 177 ||||||||| | || |||||||| ||| ||||||| |||||||| | ||||| Sbjct: 82746 ---gaatccatgggatgggcggcaagagacgacccggcgaaccgaaacatccaaatagcc 82802 Query: 178 agaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagccta 237 | |||| |||| |||||||||||||||| |||||||||||||||| ||||| |||||| Sbjct: 82803 gggggaagagaaggcaaaagcgattcccgcagtagcggcgagcgaagagggagtagccta 82862 Query: 238 aaccgtgaaaacggggttgtgggagagc 265 ||||||| ||||||||||||||||||| Sbjct: 82863 aaccgtgggaacggggttgtgggagagc 82890
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 151 bits (76), Expect = 2e-33 Identities = 166/196 (84%) Strand = Plus / Plus Query: 46 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 105 |||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggca 104 Query: 106 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 165 |||| |||| ||| | ||| ||| || |||||||||| |||| || |||||||||| Sbjct: 105 acctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaac 164 Query: 166 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 225 |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 165 atctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaa 224 Query: 226 gggagcagcctaaacc 241 |||| ||||||||||| Sbjct: 225 gggaacagcctaaacc 240
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 50 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 108 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 109 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 168 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 169 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 228 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 229 agcagcctaa 238 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 50 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 108 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 109 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 168 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 169 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 228 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 229 agcagcctaa 238 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 50 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 108 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 109 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 168 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 169 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 228 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 229 agcagcctaa 238 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 50 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 108 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 109 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 168 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 169 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 228 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 229 agcagcctaa 238 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 147 bits (74), Expect = 3e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 50 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 108 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 109 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 168 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 169 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 228 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 229 ag 230 || Sbjct: 245 ag 246
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 147 bits (74), Expect = 3e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 50 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 108 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 109 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 168 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 169 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 228 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 229 ag 230 || Sbjct: 245 ag 246
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 50 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 108 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 109 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 168 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 169 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 228 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 229 agcagcctaa 238 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 50 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 108 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 109 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 168 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 169 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 228 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 229 agcagcctaa 238 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 50 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 108 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 109 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 168 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 169 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 228 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 229 agcagcctaa 238 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 50 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 108 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 109 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 168 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 169 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 228 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 229 agcagcctaa 238 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 50 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 108 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 109 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 168 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 169 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 228 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 229 agcagcctaa 238 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 50 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 108 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 109 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 168 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 169 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 228 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 229 agcagcctaa 238 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 50 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 108 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 109 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 168 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 169 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 228 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 229 agcagcctaa 238 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 147 bits (74), Expect = 3e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 50 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 108 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 109 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 168 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 169 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 228 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 229 agcagcctaa 238 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 147 bits (74), Expect = 3e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 141 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 200 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 201 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 242 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 61.9 bits (31), Expect = 1e-06 Identities = 89/108 (82%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 || ||| |||||||||||||| | |||| ||||||||| | || |||||||| ||||||| Sbjct: 10 ggyggagacctaggcacccagag-acgaagaagggcgtggaaaccgacgaaacgcttcgg 68 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 109 | || || ||| |||| |||||| |||||||| |||||| |||||| Sbjct: 69 gaagctggaaacaagctatgatccgaagattcccgaatagggcaacct 116
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 145 bits (73), Expect = 1e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 141 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 200 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 201 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 145 bits (73), Expect = 1e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 141 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 200 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 201 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 46.1 bits (23), Expect = 0.068 Identities = 92/114 (80%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 156279 ggtggagacctaggcactcagag-acgatgaagggcgcagataccggcgatacgcttcgg 156221 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 115 |||| || || |||||| |||||| |||| ||| |||||| |||||| ||||| Sbjct: 156220 ggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaaa 156167 Score = 46.1 bits (23), Expect = 0.068 Identities = 92/114 (80%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 77613 ggtggagacctaggcactcagag-acgatgaagggcgcagataccggcgatacgcttcgg 77671 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 115 |||| || || |||||| |||||| |||| ||| |||||| |||||| ||||| Sbjct: 77672 ggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaaa 77725
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 145 bits (73), Expect = 1e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 137 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 196 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 197 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241
>gb|AF141154.1|AF141154 Vigna unguiculata clone VU124NBS4 ribosomal RNA operon, partial sequence Length = 370 Score = 145 bits (73), Expect = 1e-31 Identities = 120/132 (90%), Gaps = 3/132 (2%) Strand = Plus / Plus Query: 6 gatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 65 ||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||| Sbjct: 240 gatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggag 298 Query: 66 ttgaaaataagcatagatccggagattccc-aaataggtcaaccttttaaactgcctgct 124 |||||||| ||| ||||||||||||||||| | |||||||||||||| ||||| ||||| Sbjct: 299 ttgaaaatcagcgtagatccggagattcccgatataggtcaacctttcgaactg-ctgct 357 Query: 125 gaatccatgagc 136 ||| ||| |||| Sbjct: 358 gaacccacgagc 369
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 145 bits (73), Expect = 1e-31 Identities = 88/93 (94%) Strand = Plus / Plus Query: 148 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 207 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 188152 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 188211 Query: 208 agtagcggcgagcgaaatgggagcagcctaaac 240 |||||||||||||||| |||| |||||||||| Sbjct: 188212 agtagcggcgagcgaagcgggaacagcctaaac 188244 Score = 145 bits (73), Expect = 1e-31 Identities = 88/93 (94%) Strand = Plus / Plus Query: 148 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 207 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 149709 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 149768 Query: 208 agtagcggcgagcgaaatgggagcagcctaaac 240 |||||||||||||||| |||| |||||||||| Sbjct: 149769 agtagcggcgagcgaagcgggaacagcctaaac 149801 Score = 46.1 bits (23), Expect = 0.068 Identities = 50/59 (84%) Strand = Plus / Plus Query: 31 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggag 89 ||||||||| || | |||||||| ||| ||||||| || || ||||| ||||||||||| Sbjct: 188035 gaagggcgtggctaccgacgaaacgctccggggagctggaagtaagcttagatccggag 188093 Score = 46.1 bits (23), Expect = 0.068 Identities = 50/59 (84%) Strand = Plus / Plus Query: 31 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggag 89 ||||||||| || | |||||||| ||| ||||||| || || ||||| ||||||||||| Sbjct: 149592 gaagggcgtggctaccgacgaaacgctccggggagctggaagtaagcttagatccggag 149650
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 145 bits (73), Expect = 1e-31 Identities = 88/93 (94%) Strand = Plus / Plus Query: 148 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 207 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 189075 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 189134 Query: 208 agtagcggcgagcgaaatgggagcagcctaaac 240 |||||||||||||||| |||| |||||||||| Sbjct: 189135 agtagcggcgagcgaagcgggaacagcctaaac 189167 Score = 145 bits (73), Expect = 1e-31 Identities = 88/93 (94%) Strand = Plus / Plus Query: 148 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 207 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 150502 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 150561 Query: 208 agtagcggcgagcgaaatgggagcagcctaaac 240 |||||||||||||||| |||| |||||||||| Sbjct: 150562 agtagcggcgagcgaagcgggaacagcctaaac 150594 Score = 46.1 bits (23), Expect = 0.068 Identities = 50/59 (84%) Strand = Plus / Plus Query: 31 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggag 89 ||||||||| || | |||||||| ||| ||||||| || || ||||| ||||||||||| Sbjct: 188958 gaagggcgtggctaccgacgaaacgctccggggagctggaagtaagcttagatccggag 189016 Score = 46.1 bits (23), Expect = 0.068 Identities = 50/59 (84%) Strand = Plus / Plus Query: 31 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggag 89 ||||||||| || | |||||||| ||| ||||||| || || ||||| ||||||||||| Sbjct: 150385 gaagggcgtggctaccgacgaaacgctccggggagctggaagtaagcttagatccggag 150443
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 143 bits (72), Expect = 4e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 148 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 207 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 148 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaacgcgattccctt 207 Query: 208 agtagcggcgagcgaaatgggagcagcctaaa 239 ||||||||||||||||| |||| ||||||||| Sbjct: 208 agtagcggcgagcgaaacgggaacagcctaaa 239 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Plus Query: 31 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 90 ||||||||| | || | |||||||||||||||||| || ||| |||| |||||||||| Sbjct: 31 gaagggcgtggaaaccaacgaaatgcttcggggagctggaaacaagctacgatccggaga 90 Query: 91 ttcccaaataggtcaacc 108 ||||| ||| || ||||| Sbjct: 91 ttcccgaatggggcaacc 108
>gb|AY690322.1| Citrus meyeri tRNA-Ala (trnA) gene, complete sequence; and tRNA-Ile (trnI) gene, partial sequence; chloroplast Length = 1322 Score = 143 bits (72), Expect = 4e-31 Identities = 87/91 (95%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 90 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 32 Query: 62 ggagttgaaaataagcatagatccggagatt 92 |||||||||||||||| |||||||||||||| Sbjct: 31 ggagttgaaaataagcgtagatccggagatt 1
>gb|AY690321.1| Citrus reticulata tRNA-tRNA (trnA) gene, complete sequence; and tRNA-Ile (trnI) gene, partial sequence; chloroplast Length = 1322 Score = 143 bits (72), Expect = 4e-31 Identities = 87/91 (95%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 90 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 32 Query: 62 ggagttgaaaataagcatagatccggagatt 92 |||||||||||||||| |||||||||||||| Sbjct: 31 ggagttgaaaataagcgtagatccggagatt 1
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 143 bits (72), Expect = 4e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 148 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 207 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 2029 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaacgcgattccctt 2088 Query: 208 agtagcggcgagcgaaatgggagcagcctaaa 239 ||||||||||||||||| |||| ||||||||| Sbjct: 2089 agtagcggcgagcgaaacgggaacagcctaaa 2120 Score = 58.0 bits (29), Expect = 2e-05 Identities = 88/107 (82%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||| || | ||| ||||||||| | || | |||||||||||||| Sbjct: 1884 ggtggatacctaggcacttagagt-cgatgaagggcgtggaaaccaacgaaatgcttcgg 1942 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaacc 108 |||| || ||| |||| ||||||||||||||| ||| || ||||| Sbjct: 1943 ggagctggaaacaagctacgatccggagattcccgaatggggcaacc 1989
>gb|AY155547.1| Cyanothece sp. PCC 8801 23S ribosomal RNA gene, partial sequence Length = 732 Score = 141 bits (71), Expect = 2e-30 Identities = 89/95 (93%) Strand = Plus / Plus Query: 147 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 206 ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 167 caaccgggcgaactgaaacatcttagtagcccgaggaaaagaaagcaaaagcgattcccc 226 Query: 207 tagtagcggcgagcgaaatgggagcagcctaaacc 241 ||||||||||||||||| |||| ||||||||||| Sbjct: 227 cagtagcggcgagcgaaaagggaacagcctaaacc 261
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 139 bits (70), Expect = 6e-30 Identities = 88/94 (93%) Strand = Plus / Plus Query: 148 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 207 ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1692 aacctggtgaactgaaacatcttagtagccagaggaaaagaaagcaacagcgattccccc 1751 Query: 208 agtagcggcgagcgaaatgggagcagcctaaacc 241 ||||||||||||||||| |||| ||||||||||| Sbjct: 1752 agtagcggcgagcgaaaagggaacagcctaaacc 1785
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 139 bits (70), Expect = 6e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 141 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 200 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 201 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 242 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CpaI, site-specific DNA endonuclease I-CpaIII, site-specific DNA endonuclease I-CpaIV, site-specific DNA endonuclease I-CpaV genes Length = 8217 Score = 139 bits (70), Expect = 6e-30 Identities = 193/233 (82%), Gaps = 1/233 (0%) Strand = Plus / Plus Query: 9 acctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttg 68 |||||||||| ||| | |||| |||||||| || | || ||||| ||||||||||| || Sbjct: 28 acctaggcactcagag-acgatgaagggcgcagataccggcgaaacgcttcggggagctg 86 Query: 69 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 128 || |||| | |||||| |||||||| |||||| |||||| ||||||| ||| ||| Sbjct: 87 gcaacaagctttgatccgaagattcccgaatagggcaacctattaaacttcctatacaat 146 Query: 129 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 188 ||| ||| |||||| |||| | |||||||||||||| |||||| |||||||||| Sbjct: 147 tcatatttaggaaagagagaacccagtgaactgaaacatctaagtagctggaggaaaaga 206 Query: 189 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 207 aagcaaaagcgattcccgtagtagcggcgagcgaactgggatcagcctaaacc 259
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 139 bits (70), Expect = 6e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 141 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 200 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 201 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 242 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 139 bits (70), Expect = 6e-30 Identities = 88/94 (93%) Strand = Plus / Plus Query: 148 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 207 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 208 agtagcggcgagcgaaatgggagcagcctaaacc 241 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 48.1 bits (24), Expect = 0.017 Identities = 33/36 (91%) Strand = Plus / Plus Query: 26 acgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||| ||||||||||| ||||||||||| ||||||| Sbjct: 7 acgaagaagggcgtagtaagcgacgaaacgcttcgg 42
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 139 bits (70), Expect = 6e-30 Identities = 88/94 (93%) Strand = Plus / Minus Query: 148 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 207 |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 2334657 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagaaaactcgattccctt 2334598 Query: 208 agtagcggcgagcgaaatgggagcagcctaaacc 241 ||||||||||||||||| |||| ||||||||||| Sbjct: 2334597 agtagcggcgagcgaaaggggaacagcctaaacc 2334564
>emb|X68899.1|CHCPRRNX1 Chloroplast Chlamydomonas pallidostigmatica rrnL gene, exon 1 Length = 2219 Score = 139 bits (70), Expect = 6e-30 Identities = 193/233 (82%), Gaps = 1/233 (0%) Strand = Plus / Plus Query: 9 acctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttg 68 |||||||||| ||| | |||| |||||||| || | || ||||| ||||||||||| || Sbjct: 28 acctaggcactcagag-acgatgaagggcgcagataccggcgaaacgcttcggggagctg 86 Query: 69 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 128 || |||| | |||||| |||||||| |||||| |||||| ||||||| ||| ||| Sbjct: 87 gcaacaagctttgatccgaagattcccgaatagggcaacctattaaacttcctatacaat 146 Query: 129 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 188 ||| ||| |||||| |||| | |||||||||||||| |||||| |||||||||| Sbjct: 147 tcatatttaggaaagagagaacccagtgaactgaaacatctaagtagctggaggaaaaga 206 Query: 189 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 207 aagcaaaagcgattcccgtagtagcggcgagcgaactgggatcagcctaaacc 259
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 139 bits (70), Expect = 6e-30 Identities = 88/94 (93%) Strand = Plus / Plus Query: 148 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 207 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | | Sbjct: 1718 aacctagcgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattctctt 1777 Query: 208 agtagcggcgagcgaaatgggagcagcctaaacc 241 ||||||||||||||||| |||| ||||||||||| Sbjct: 1778 agtagcggcgagcgaaaagggaacagcctaaacc 1811
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 137 bits (69), Expect = 2e-29 Identities = 201/242 (83%), Gaps = 3/242 (1%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 || ||| |||||||||| ||| | |||| ||||||||| | || |||||||| ||||||| Sbjct: 10 ggyggagacctaggcactcagag-acgatgaagggcgtggtaaccgacgaaacgcttcgg 68 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| || | | ||| | |||||| |||||||| |||||| |||||| || ||| | | Sbjct: 69 ggagctggatacgagctttgatccgaagattcccgaatagggcaacctcttggactcctt 128 Query: 122 gctgaatccatgagc-aggcaagagacaacctggcgaactgaaacatcttagtagccaga 180 ||||| ||| ||| | | |||||| |||| || ||| ||||||||||||||| || || Sbjct: 129 agtgaattcat-agctaagaaagagataacccggtgaattgaaacatcttagtaaccgga 187 Query: 181 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 240 ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 188 ggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaatgggaacagcctaaac 247 Query: 241 cg 242 || Sbjct: 248 cg 249
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 135 bits (68), Expect = 1e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 147 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 206 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 207 tagtagcggcgagcgaaatgggagcagcctaaaccg 242 |||||||||||||||| |||| |||||||||||| Sbjct: 210 cagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 40.1 bits (20), Expect = 4.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 283 gctaggcgaagcggttgagtgccgcacc 310 ||||| |||||||||||||| ||||||| Sbjct: 287 gctagacgaagcggttgagttccgcacc 314
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 135 bits (68), Expect = 1e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 147 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 206 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 163 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 222 Query: 207 tagtagcggcgagcgaaatgggagcagcctaaaccg 242 |||||||||||||||| |||| |||||||||||| Sbjct: 223 cagtagcggcgagcgaagagggaacagcctaaaccg 258 Score = 40.1 bits (20), Expect = 4.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 283 gctaggcgaagcggttgagtgccgcacc 310 ||||| |||||||||||||| ||||||| Sbjct: 300 gctagacgaagcggttgagttccgcacc 327
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 135 bits (68), Expect = 1e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 147 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 206 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 4737 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 4796 Query: 207 tagtagcggcgagcgaaatgggagcagcctaaaccg 242 |||||||||||||||| |||| |||||||||||| Sbjct: 4797 cagtagcggcgagcgaagagggaacagcctaaaccg 4832 Score = 40.1 bits (20), Expect = 4.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 283 gctaggcgaagcggttgagtgccgcacc 310 ||||| |||||||||||||| ||||||| Sbjct: 4874 gctagacgaagcggttgagttccgcacc 4901
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 133 bits (67), Expect = 4e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 135 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 194 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 195 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 254 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 255 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 314 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 315 a 315 | Sbjct: 325 a 325
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 131 bits (66), Expect = 1e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 160 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 220 cgaaatgggagcagcctaaacc 241 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 129 bits (65), Expect = 6e-27 Identities = 83/89 (93%) Strand = Plus / Plus Query: 141 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 200 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 201 ttcccgtagtagcggcgagcgaaatggga 229 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 129 bits (65), Expect = 6e-27 Identities = 198/240 (82%), Gaps = 2/240 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||||| | || | |||| ||||||||| | || | ||||||||||||| Sbjct: 123 ggtggatacctaggcatctagag-acgatgaagggcgtggaaaccaacgaaatgcttcga 181 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| || ||| |||| ||| ||||||||||| |||||| |||||||||| ||| ||| Sbjct: 182 ggagctggaaacaagctatgattcggagattcccgaatagggcaaccttttatactacct 241 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 ||||| ||| ||| ||||||||||| | ||| |||||||||||||||| ||| Sbjct: 242 attgaattcatagataggaaagagacaacccagtgaag-gaaacatcttagtagctggag 300 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||| ||||||||| ||||||||||||||||||| | ||||||||||| Sbjct: 301 gaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaatcccaacagcctaaacc 360
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 127 bits (64), Expect = 2e-26 Identities = 115/132 (87%) Strand = Plus / Minus Query: 110 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 169 |||| ||| ||| |||||| ||| || ||||||||| ||| |||||||||||||||||| Sbjct: 27704 tttatactacctactgaattcataagtaggcaagagctaacttggcgaactgaaacatct 27645 Query: 170 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 229 ||||||||| |||||||||||||||| ||||||| | |||||| ||||| ||||| |||| Sbjct: 27644 tagtagccaaaggaaaagaaagcaaacgcgattctcttagtagtggcgaacgaaaaggga 27585 Query: 230 gcagcctaaacc 241 ||||||||||| Sbjct: 27584 acagcctaaacc 27573
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 127 bits (64), Expect = 2e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 154 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 213 ||||| ||||||||||||||||| |||||||| |||||||||||||||||| ||||||| Sbjct: 161 gcgaattgaaacatcttagtagctggaggaaaaaaaagcaaaagcgattcccttagtagc 220 Query: 214 ggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||| ||||||||||| Sbjct: 221 ggcgagcgaaatgggaacagcctaaacc 248
>gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3875 Score = 127 bits (64), Expect = 2e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 148 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 207 ||||||| ||| ||||||||||||||| |||||||||||||||||||| ||||||||| | Sbjct: 149 aacctggtgaattgaaacatcttagtaaccagaggaaaagaaagcaaacgcgattccctt 208 Query: 208 agtagcggcgagcgaaatgggagcagcctaaa 239 ||||||||||||||||| |||| ||||||||| Sbjct: 209 agtagcggcgagcgaaacgggaacagcctaaa 240
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 127 bits (64), Expect = 2e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 142 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 201 |||||||||| || ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 159 agagacaacccggtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 218 Query: 202 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 258
>gb|DQ313018.1| Uncultured bacterium clone 3P12F 23S ribosomal RNA gene, partial sequence Length = 798 Score = 127 bits (64), Expect = 2e-26 Identities = 79/84 (94%) Strand = Plus / Plus Query: 156 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 215 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 8 gaactgaaacatcttagtagccaaaggaaaagaaagcaaaagcgattcccaaagtagcgg 67 Query: 216 cgagcgaaatgggagcagcctaaa 239 |||||| ||||||| ||||||||| Sbjct: 68 cgagcggaatgggaacagcctaaa 91
>gb|DQ312920.1| Uncultured bacterium clone 3M10C 23S ribosomal RNA gene, partial sequence Length = 798 Score = 127 bits (64), Expect = 2e-26 Identities = 79/84 (94%) Strand = Plus / Plus Query: 156 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 215 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 8 gaactgaaacatcttagtagccaaaggaaaagaaagcaaaagcgattcccaaagtagcgg 67 Query: 216 cgagcgaaatgggagcagcctaaa 239 |||||| ||||||| ||||||||| Sbjct: 68 cgagcggaatgggaacagcctaaa 91
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 127 bits (64), Expect = 2e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 154 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 213 ||||| ||||||||||||||||| |||||||| |||||||||||||||||| ||||||| Sbjct: 1898 gcgaattgaaacatcttagtagctggaggaaaaaaaagcaaaagcgattcccttagtagc 1957 Query: 214 ggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||| ||||||||||| Sbjct: 1958 ggcgagcgaaatgggaacagcctaaacc 1985
>gb|AF141151.1|AF141151 Vigna unguiculata clone VU124KNF1-1 16S ribosomal RNA gene, partial sequence and 18S ribosomal RNA gene, partial sequence Length = 345 Score = 127 bits (64), Expect = 2e-26 Identities = 98/107 (91%), Gaps = 2/107 (1%) Strand = Plus / Plus Query: 6 gatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 65 |||||||||||||||| | |||||||||||||||| |||||||||||||||| |||||| Sbjct: 229 gatacctaggcacccatag-acgaggaagggcgtagtaagcgacgaaatgctttggggag 287 Query: 66 ttgaaaataagcatagatccggagattccc-aaataggtcaaccttt 111 |||||||| ||| ||||||||||||||||| | |||||||||||||| Sbjct: 288 ttgaaaatcagcgtagatccggagattcccgatataggtcaaccttt 334
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 127 bits (64), Expect = 2e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 142 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 201 |||||||||| || ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 159 agagacaacccggtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 218 Query: 202 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 258
>gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, complete genome Length = 149705 Score = 125 bits (63), Expect = 9e-26 Identities = 88/95 (92%), Gaps = 1/95 (1%) Strand = Plus / Minus Query: 148 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc-g 206 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 45899 aacctagcgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattcccac 45840 Query: 207 tagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||| ||||||||||| |||| ||||||||||| Sbjct: 45839 tagtagtggcgagcgaaaggggaacagcctaaacc 45805
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 125 bits (63), Expect = 9e-26 Identities = 197/241 (81%), Gaps = 1/241 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||||||||| | || |||||||| | || || ||||| ||||||| Sbjct: 136496 ggtggatacctaggcacccaaagtt-gatgaagggcgcggaaaccggcgaaacgcttcgg 136554 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||| ||| | || | |||||| |||| ||| ||| || ||||| |||||||| || Sbjct: 136555 ggagttggaaacacgctttgatccgaagatacccgaatggggcaaccctttaaactaccg 136614 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||| ||| | ||||||| |||| | ||||||||||||||||||| | ||| Sbjct: 136615 actgaattcataggtcggcaagaagtaacccgctgaactgaaacatcttagtaagcggag 136674 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||| ||||||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 136675 gaaaagaaagcaaacgcgattcccttagtagcggcgagcgaagtgggaacagcctaaacc 136734 Query: 242 g 242 | Sbjct: 136735 g 136735 Score = 125 bits (63), Expect = 9e-26 Identities = 197/241 (81%), Gaps = 1/241 (0%) Strand = Plus / Minus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||||||||| | || |||||||| | || || ||||| ||||||| Sbjct: 49048 ggtggatacctaggcacccaaagtt-gatgaagggcgcggaaaccggcgaaacgcttcgg 48990 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||| ||| | || | |||||| |||| ||| ||| || ||||| |||||||| || Sbjct: 48989 ggagttggaaacacgctttgatccgaagatacccgaatggggcaaccctttaaactaccg 48930 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 |||||| ||| | ||||||| |||| | ||||||||||||||||||| | ||| Sbjct: 48929 actgaattcataggtcggcaagaagtaacccgctgaactgaaacatcttagtaagcggag 48870 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||| ||||||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 48869 gaaaagaaagcaaacgcgattcccttagtagcggcgagcgaagtgggaacagcctaaacc 48810 Query: 242 g 242 | Sbjct: 48809 g 48809
>gb|L49151.1|HAKCPRGOL Haematococcus lacustris chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6713 Score = 125 bits (63), Expect = 9e-26 Identities = 196/240 (81%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 || ||| |||||||||||||| | |||| |||||||| || | || ||||| ||||||| Sbjct: 3 ggyggagacctaggcacccagag-acgatgaagggcgcagataccggcgaaacgcttcgg 61 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 |||| || || ||||||||||||| |||| ||| |||||| |||||| ||||| || Sbjct: 62 ggagctggcaacaagcatagatccgaagatccccgaatagggcaacctgcaaaactacca 121 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 | ||| ||| || || |||||| |||| | ||| ||||||||||||||||| | | Sbjct: 122 acaaaattcataagttggaaagagagaacccagtgaattgaaacatcttagtagctggtg 181 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 182 gaaaagaaagcaaacgcgattcccgtagtagcggcgagcgaaccgggaacagcctaaacc 241
>gb|L43540.1|DUNCPRRNL Dunaliella parva Length = 5685 Score = 125 bits (63), Expect = 9e-26 Identities = 196/240 (81%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 || ||| |||||||||||||| | |||| |||||||| || | || ||||| ||| ||| Sbjct: 3 ggyggagacctaggcacccagag-acgaagaagggcgcagataccggcgaaacgctccgg 61 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 121 ||||||| || || | | ||||||||||| ||| |||||| |||||| | |||| || Sbjct: 62 ggagttggcaacaaactttgatccggagatccccgaatagggcaacctgtacaacttcca 121 Query: 122 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 181 | |||| ||| || || ||||| ||||| | ||| ||||||||||||||||| ||| Sbjct: 122 acagaattcataagttggaaagaggcaacccagtgaattgaaacatcttagtagctggag 181 Query: 182 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 182 gaaaagaaagcaaacgcgattcccgtagtagcggcgagcgaaccgggaacagcctaaacc 241
>dbj|AB002583.1| Cyanidioschyzon merolae chloroplast DNA, complete genome, strain:10D Length = 149987 Score = 125 bits (63), Expect = 9e-26 Identities = 88/95 (92%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 148 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc-g 206 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 19480 aacctagcgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattcccac 19539 Query: 207 tagtagcggcgagcgaaatgggagcagcctaaacc 241 |||||| ||||||||||| |||| ||||||||||| Sbjct: 19540 tagtagtggcgagcgaaaggggaacagcctaaacc 19574
>dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04I09, TM0269b, complete sequence Length = 66087 Score = 125 bits (63), Expect = 9e-26 Identities = 63/63 (100%) Strand = Plus / Plus Query: 136 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43316 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 43375 Query: 196 agc 198 ||| Sbjct: 43376 agc 43378 Score = 107 bits (54), Expect = 2e-20 Identities = 57/58 (98%) Strand = Plus / Plus Query: 136 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 193 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40844 caggcaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 40901 Score = 63.9 bits (32), Expect = 3e-07 Identities = 54/60 (90%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 82 atccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggca 141 |||||||||||||| ||||||||||||||| |||| |||||||||||||| ||||||| Sbjct: 63009 atccggagattcccgaataggtcaacctttcgaact-actgctgaatccatgggcaggca 62951
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 123 bits (62), Expect = 4e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 148 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 207 ||||||| || |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1691 aacctggtgagctgaaacatcttagtagccagaggaaaagaaagcaacagcgattccccc 1750 Query: 208 agtagcggcgagcgaaatgggagcagcctaaacc 241 |||||||||||||||| |||| ||||||||||| Sbjct: 1751 cgtagcggcgagcgaaaagggaacagcctaaacc 1784
>gb|AE012979.1| Thermoanaerobacter tengcongensis MB4, section 6 of 244 of the complete genome Length = 12243 Score = 123 bits (62), Expect = 4e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 148 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 207 |||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 9145 aaccgggcgaactgaaacatctaagtagcccgaggaaaagaaagcaaaagcgattcccta 9204 Query: 208 agtagcggcgagcgaaatgggagcagcctaaacc 241 ||||||||||||||||| ||||| |||| ||||| Sbjct: 9205 agtagcggcgagcgaaaggggagaagcccaaacc 9238
>gb|AE012982.1| Thermoanaerobacter tengcongensis MB4, section 9 of 244 of the complete genome Length = 6166 Score = 123 bits (62), Expect = 4e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 148 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 207 |||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 1954 aaccgggcgaactgaaacatctaagtagcccgaggaaaagaaagcaaaagcgattcccta 2013 Query: 208 agtagcggcgagcgaaatgggagcagcctaaacc 241 ||||||||||||||||| ||||| |||| ||||| Sbjct: 2014 agtagcggcgagcgaaaggggagaagcccaaacc 2047
>gb|L44124.1|MNXCPRGOL Monomastix sp. (M722) chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5001 Score = 123 bits (62), Expect = 4e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 142 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 201 |||||||||| | ||| ||||||||||||||||| |||||| |||||||||||||||| Sbjct: 149 agagacaaccgagtgaattgaaacatcttagtagctcgaggaagagaaagcaaaagcgat 208 Query: 202 tcccgtagtagcggcgagcgaaatgggagcagcctaaa 239 ||||| |||||||||||||||||||||| ||||||||| Sbjct: 209 tcccggagtagcggcgagcgaaatgggaacagcctaaa 246 Score = 50.1 bits (25), Expect = 0.004 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||||||||| | |||| |||||||||| | |||||| | ||||||| Sbjct: 10 ggtggatacctaggcacccaaag-acgatgaagggcgtacttaccgacgatacgcttcgg 68 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 109 |||| || || | || | |||||| |||||||| |||||| |||||| Sbjct: 69 ggagctggaatgacgctttgatccgaagattcccgaatagggcaacct 116
>gb|L49154.1|MNXCPRGOLA Monomastix sp. OKE-1 large subunit ribosomal RNA gene, partial sequence; and putative protein genes, complete cds; chloroplast Length = 6151 Score = 123 bits (62), Expect = 4e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 142 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 201 |||||||||| | ||| ||||||||||||||||| |||||| |||||||||||||||| Sbjct: 149 agagacaaccgagtgaattgaaacatcttagtagctcgaggaagagaaagcaaaagcgat 208 Query: 202 tcccgtagtagcggcgagcgaaatgggagcagcctaaa 239 ||||| |||||||||||||||||||||| ||||||||| Sbjct: 209 tcccggagtagcggcgagcgaaatgggaacagcctaaa 246 Score = 50.1 bits (25), Expect = 0.004 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 |||||||||||||||||||| | |||| |||||||||| | |||||| | ||||||| Sbjct: 10 ggtggatacctaggcacccaaag-acgatgaagggcgtacttaccgacgatacgcttcgg 68 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 109 |||| || || | || | |||||| |||||||| |||||| |||||| Sbjct: 69 ggagctggaatgacgctttgatccgaagattcccgaatagggcaacct 116
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 123 bits (62), Expect = 4e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 160 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 220 cgaaatgggagcagcctaaacc 241 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 123 bits (62), Expect = 4e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 160 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 220 cgaaatgggagcagcctaaacc 241 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 46.1 bits (23), Expect = 0.068 Identities = 87/108 (80%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 || ||| |||||||||||||| | |||| |||||||| || | || ||||| ||||||| Sbjct: 3 ggyggagacctaggcacccagag-acgatgaagggcgcagataccggcgaaacgcttcgg 61 Query: 62 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 109 |||| || || |||| | |||||| |||| ||| |||||| |||||| Sbjct: 62 ggagctggcaacaagctttgatccgaagatccccgaatagggcaacct 109
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 123 bits (62), Expect = 4e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 147 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 206 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 207 tagtagcggcgagcgaaatgggagcagcctaaac 240 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>gb|DQ001736.1| Eschscholzia californica voucher P.M. McNutt 014 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2694 Score = 123 bits (62), Expect = 4e-25 Identities = 71/73 (97%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 2623 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 2681 Query: 62 ggagttgaaaata 74 ||||||||||||| Sbjct: 2682 ggagttgaaaata 2694
>gb|DQ001733.1| Musa acuminata voucher P.M. McNutt 001 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2721 Score = 123 bits (62), Expect = 4e-25 Identities = 71/73 (97%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 2650 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 2708 Query: 62 ggagttgaaaata 74 ||||||||||||| Sbjct: 2709 ggagttgaaaata 2721
>gb|DQ001732.1| Lolium perenne voucher P.M. McNutt 018 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2589 Score = 123 bits (62), Expect = 4e-25 Identities = 71/73 (97%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 2 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 2518 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 2576 Query: 62 ggagttgaaaata 74 ||||||||||||| Sbjct: 2577 ggagttgaaaata 2589 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,298,992 Number of Sequences: 3902068 Number of extensions: 2298992 Number of successful extensions: 60243 Number of sequences better than 10.0: 4567 Number of HSP's better than 10.0 without gapping: 4475 Number of HSP's successfully gapped in prelim test: 114 Number of HSP's that attempted gapping in prelim test: 51150 Number of HSP's gapped (non-prelim): 8325 length of query: 320 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 298 effective length of database: 17,147,199,772 effective search space: 5109865532056 effective search space used: 5109865532056 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
