ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd27m17 |
|---|---|
| Clone Library Name | barley_pub |
>EXO70_CANGA (Q6FJW2) Exocyst complex protein EXO70| Length = 623 Score = 78.2 bits (191), Expect = 1e-14 Identities = 45/148 (30%), Positives = 78/148 (52%) Frame = +3 Query: 39 LMNNLWYVVQKIKDSELKTLLGDNWIRKRRGQIRRYSTGYLRSSWTRVLACLRDDGLPHA 218 ++ N+ V Q ++ SEL +LG N + R ++++ YL + W + L D + + Sbjct: 476 VLMNMTLVEQIVEKSELSVMLG-NLGKARIEKLKKRYVNYLVADWKDLTVNLMDTVVIDS 534 Query: 219 TGSSSALKAALKERFKSFNLAYEELYRTQTAWRVVDPQLREELKISISEKVLPAYRSFVG 398 G S K +KE+F+ FN +E+L +++ DP L+ LK I ++P Y F G Sbjct: 535 VGKKSKDKEQIKEKFRRFNEGFEDLISRTKQYKLSDPALKRLLKSEIVALLMPMYDRFYG 594 Query: 399 RFRGQLEGGRNFAKYIKYNPEDVENQVS 482 R++ + R K+IKY P+D+ N +S Sbjct: 595 RYKDSFKNPR---KHIKYTPDDITNVIS 619
>EXOC7_MOUSE (O35250) Exocyst complex component 7 (Exocyst complex component| Exo70) Length = 697 Score = 76.6 bits (187), Expect = 4e-14 Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 6/170 (3%) Frame = +3 Query: 3 KLYDDEALQNIFLMNNLWYVVQKIKDSELKTLLG---DNWIRKRRGQIRRYSTGYLRSSW 173 K+Y+D AL IFL NN Y+++ ++ SEL L+ R R I + Y RS W Sbjct: 527 KVYEDPALSAIFLHNNYNYILKSLEKSELIQLVAVTQKTAERSYREHIEQQIQTYQRS-W 585 Query: 174 TRVLACLRDDGLP---HATGSSSALKAALKERFKSFNLAYEELYRTQTAWRVVDPQLREE 344 +V + + LP + +KERFK FN EEL + Q W + D + R++ Sbjct: 586 LKVTDYIAEKNLPVFQPGVKLRDKERQMIKERFKGFNDGLEELCKIQKVWAIPDTEQRDK 645 Query: 345 LKISISEKVLPAYRSFVGRFRGQLEGGRNFAKYIKYNPEDVENQVSDFFE 494 ++ + + V Y +F+ R+ G + +N KYIKY E V + + F+ Sbjct: 646 IRQAQKDIVKETYGAFLHRY-GSVPFTKNPEKYIKYRVEQVGDMIDRLFD 694
>EXOC7_HUMAN (Q9UPT5) Exocyst complex component 7 (Exocyst complex component| Exo70) Length = 735 Score = 76.6 bits (187), Expect = 4e-14 Identities = 54/170 (31%), Positives = 83/170 (48%), Gaps = 6/170 (3%) Frame = +3 Query: 3 KLYDDEALQNIFLMNNLWYVVQKIKDSELKTLLG---DNWIRKRRGQIRRYSTGYLRSSW 173 K+Y+D AL IFL NN Y+++ ++ SEL L+ R R I + Y RS W Sbjct: 565 KVYEDPALSAIFLHNNYNYILKSLEKSELIQLVAVTQKTAERSYREHIEQQIQTYQRS-W 623 Query: 174 TRVLACLRDDGLP---HATGSSSALKAALKERFKSFNLAYEELYRTQTAWRVVDPQLREE 344 +V + + LP + +KERFK FN EEL + Q AW + D + R+ Sbjct: 624 LKVTDYIAEKNLPVFQPGVKLRDKERQIIKERFKGFNDGLEELCKIQKAWAIPDTEQRDR 683 Query: 345 LKISISEKVLPAYRSFVGRFRGQLEGGRNFAKYIKYNPEDVENQVSDFFE 494 ++ + V Y +F+ +F G + +N KYIKY E V + + F+ Sbjct: 684 IRQAQKTIVKETYGAFLQKF-GSVPFTKNPEKYIKYGVEQVGDMIDRLFD 732
>EXO70_KLULA (Q6CK11) Exocyst complex protein EXO70| Length = 619 Score = 76.3 bits (186), Expect = 6e-14 Identities = 46/147 (31%), Positives = 79/147 (53%), Gaps = 1/147 (0%) Frame = +3 Query: 36 FLMNNLWYVVQKIKDSELKTLLGDNWIRKRRGQIRRYSTGYLRSSWTRVLACLRDDGLPH 215 FL+NNL + Q ++ SE+ ++LG + + ++Y Y+ S W + + L D Sbjct: 470 FLLNNLSLIDQIVQRSEINSILGSAGLARLESLRKKYINYYV-SDWRDLTSILLDQIFVD 528 Query: 216 ATGS-SSALKAALKERFKSFNLAYEELYRTQTAWRVVDPQLREELKISISEKVLPAYRSF 392 ++G SS K +KE+FK F+ +E+L ++R+ DP L++ L+ I VLP Y F Sbjct: 529 SSGKVSSKEKDQIKEKFKKFHDGFEDLVSRSKSYRISDPALKKILRQEILSLVLPMYERF 588 Query: 393 VGRFRGQLEGGRNFAKYIKYNPEDVEN 473 R++ + R K+IKY P ++ N Sbjct: 589 YNRYKDSFKHPR---KHIKYTPSELMN 612
>EXOC7_RAT (O54922) Exocyst complex component 7 (Exocyst complex component| Exo70) (rExo70) Length = 653 Score = 75.1 bits (183), Expect = 1e-13 Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 6/170 (3%) Frame = +3 Query: 3 KLYDDEALQNIFLMNNLWYVVQKIKDSELKTLLG---DNWIRKRRGQIRRYSTGYLRSSW 173 K+Y+D AL IFL NN Y+++ ++ SEL L+ R R I + Y RS W Sbjct: 483 KVYEDPALSAIFLHNNYNYILKSLEKSELIQLVAVTQKTAERSYREHIEQQIQTYQRS-W 541 Query: 174 TRVLACLRDDGLP---HATGSSSALKAALKERFKSFNLAYEELYRTQTAWRVVDPQLREE 344 +V + + LP + +KERFK FN EEL + Q AW + D + R++ Sbjct: 542 LKVTDYIAEKNLPVFQPGVKLRDKERQMIKERFKGFNDGLEELCKIQKAWAIPDTEQRDK 601 Query: 345 LKISISEKVLPAYRSFVGRFRGQLEGGRNFAKYIKYNPEDVENQVSDFFE 494 ++ + V Y +F+ R+ + +N KYIKY E V + + F+ Sbjct: 602 IRQAQKSIVKETYGAFLHRY-SSVPFTKNPEKYIKYRVEQVGDMIDRLFD 650
>EXO70_YEAST (P19658) Exocyst complex component EXO70 (Exocyst complex protein| of 70 kDa) Length = 623 Score = 74.3 bits (181), Expect = 2e-13 Identities = 43/144 (29%), Positives = 73/144 (50%) Frame = +3 Query: 36 FLMNNLWYVVQKIKDSELKTLLGDNWIRKRRGQIRRYSTGYLRSSWTRVLACLRDDGLPH 215 F++ NL V Q ++ SEL +L R ++++ Y+ S W + A L D Sbjct: 475 FILMNLTLVEQIVEKSELNLMLAGEG-HSRLERLKKRYISYMVSDWRDLTANLMDSVFID 533 Query: 216 ATGSSSALKAALKERFKSFNLAYEELYRTQTAWRVVDPQLREELKISISEKVLPAYRSFV 395 ++G S K +KE+F+ FN +E+L +++ DP L+ LK I V+P Y F Sbjct: 534 SSGKKSKDKEQIKEKFRKFNEGFEDLVSKTKQYKLSDPSLKVTLKSEIISLVMPMYERFY 593 Query: 396 GRFRGQLEGGRNFAKYIKYNPEDV 467 R++ + R K+IKY P+++ Sbjct: 594 SRYKDSFKNPR---KHIKYTPDEL 614
>EXOC7_DROME (Q9VSJ8) Exocyst complex component 7 (Exocyst complex component| Exo70) Length = 693 Score = 69.7 bits (169), Expect = 5e-12 Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 6/168 (3%) Frame = +3 Query: 9 YDDEALQNIFLMNNLWYVVQKIKDS---ELKTLLGDNWIRKRRGQIRRYSTGYLRSSWTR 179 Y+D+A +++F +NN+ Y+++ ++ S +L TL IR Y + +W++ Sbjct: 525 YNDQATKHLFRLNNIHYILKSLQRSNLIDLVTLAEPECEHSYMEMIRELKASY-QKTWSK 583 Query: 180 VLACLRD-DGLPHATGSSSALK--AALKERFKSFNLAYEELYRTQTAWRVVDPQLREELK 350 +L + D LP K + LKERF +FN +EE + Q + D LRE +K Sbjct: 584 MLVGIYSLDELPKPVAGKVKDKDRSVLKERFSNFNKDFEEACKIQRGISIPDVILREGIK 643 Query: 351 ISISEKVLPAYRSFVGRFRGQLEGGRNFAKYIKYNPEDVENQVSDFFE 494 E +LP Y F + G + +N KY+KY ++ +S F+ Sbjct: 644 RDNVEHILPIYNRFYEIYSG-VHFSKNPDKYVKYRQHEINAMLSKLFD 690
>EXO70_ASHGO (Q754H0) Exocyst complex protein EXO70| Length = 614 Score = 67.8 bits (164), Expect = 2e-11 Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 1/147 (0%) Frame = +3 Query: 36 FLMNNLWYVVQKIKDSELKTLLGDNWIRKRRGQIRRYSTGYLRSSWTRVLACLRDDGLPH 215 F++ N+ + Q ++ SE+ T+L D + RY Y S W + + L D Sbjct: 465 FVLTNITLIEQIVQRSEINTVLEDIGAARLVKLNARY-VNYFASDWRDLASNLLDQVFVD 523 Query: 216 ATGS-SSALKAALKERFKSFNLAYEELYRTQTAWRVVDPQLREELKISISEKVLPAYRSF 392 ++G SS K +KE+F+ FN +E+L R+ DP +++ LK I V P Y F Sbjct: 524 SSGKISSKDKDQVKEKFRKFNEGFEQLVSNYKTCRITDPAMKKLLKQEIFALVAPMYERF 583 Query: 393 VGRFRGQLEGGRNFAKYIKYNPEDVEN 473 R++ + R K+IKY P ++ N Sbjct: 584 HNRYKDSFKNPR---KHIKYTPNELMN 607
>EXO70_YARLI (Q6CC70) Exocyst complex protein EXO70| Length = 603 Score = 60.1 bits (144), Expect = 4e-09 Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 1/141 (0%) Frame = +3 Query: 36 FLMNNLWYVVQKIKDSELKTLLGDNWIRKRRGQIRRYSTGYLRSSWTRVLACLRDDGLPH 215 FL+ NL + + + SE+ +LG R+R ++R+ W + L D + + Sbjct: 453 FLLTNLTLIERFVTKSEVYKVLGGQG-RERLEKLRKRGLNLFLEGWKATASLLMDTTVVN 511 Query: 216 ATGS-SSALKAALKERFKSFNLAYEELYRTQTAWRVVDPQLREELKISISEKVLPAYRSF 392 + GS SS + +K++FK+FN +EEL + + + DP L++ L ++ + P Y + Sbjct: 512 SKGSLSSKDRELVKDKFKTFNADFEELVKNHKTYTITDPALKQLLAKEVA-FICPLYHRY 570 Query: 393 VGRFRGQLEGGRNFAKYIKYN 455 + G + +N KYIKY+ Sbjct: 571 YDKHIGG-DFSKNVDKYIKYD 590
>EXO70_DEBHA (Q6BT51) Exocyst complex protein EXO70| Length = 613 Score = 51.2 bits (121), Expect = 2e-06 Identities = 29/89 (32%), Positives = 47/89 (52%) Frame = +3 Query: 219 TGSSSALKAALKERFKSFNLAYEELYRTQTAWRVVDPQLREELKISISEKVLPAYRSFVG 398 +G SS K +K+ FK+FN ++E+ R + + D LR L I + ++ AY Sbjct: 524 SGMSSKEKEQIKDLFKNFNESFEDALRNYEKYNITDVNLRAYLSGEIKKLIMNAYFKLYD 583 Query: 399 RFRGQLEGGRNFAKYIKYNPEDVENQVSD 485 ++ G E +N AKYIKYN E +++ Sbjct: 584 KY-GSGEFTKNKAKYIKYNKHQFEQILNE 611
>EXO70_ASPFU (Q4X0X6) Exocyst complex protein exo70| Length = 628 Score = 46.2 bits (108), Expect = 6e-05 Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 18/177 (10%) Frame = +3 Query: 6 LYDDEALQNIFLMNNLWYVVQKIKDS-ELKTLLGDNWIRKRRGQIRRYSTGYLRSSWTRV 182 L+ +A+Q +FL N V + I+ S EL LG R R+ +T +W Sbjct: 453 LHRSKAVQGVFLSNVFCIVDRAIRQSPELARHLGTPDSIARIDTFRKRATSTYLDAWKET 512 Query: 183 LACLRD------DGLPHATGS-----------SSALKAALKERFKSFNLAYEELYRTQTA 311 L D G A+G SS K A+K++FK+FN +++EL A Sbjct: 513 SQYLLDVQYTSRAGARPASGGIVDSSAIVKSLSSKDKDAIKDKFKAFNASFDELVNRHKA 572 Query: 312 WRVVDPQLREELKISISEKVLPAYRSFVGRFRGQLEGGRNFAKYIKYNPEDVENQVS 482 ++ ++R L + + P Y F R+ +++ GR KY+KY+ + Q++ Sbjct: 573 -LYMEREVRGVLAREVQAVLEPLYARFWDRYH-EIDKGR--GKYVKYDKGSLSAQLA 625
>EXO70_EMENI (Q5AZS0) Exocyst complex protein exo70| Length = 631 Score = 45.4 bits (106), Expect = 1e-04 Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 20/180 (11%) Frame = +3 Query: 3 KLYDDEALQNIFLMNNLWYVVQKIKDS-ELKTLLGDNWIRKRRGQIRRYSTGYLRSSWTR 179 +L+ +A Q +FL N V + I+ S EL LG R R+ +T +W Sbjct: 453 QLHRTKAAQGVFLSNVFCLVDRAIRSSPELARFLGSPDSVSRIDTFRKRATSTYLDAWKE 512 Query: 180 VLACLRD---------DGLPHATGS----------SSALKAALKERFKSFNLAYEELYRT 302 L D P + G+ SS K A+K++FK+FN ++++L Sbjct: 513 TSHYLLDVQYTSHTRGGSRPQSGGAVDSSAIVKSLSSRDKDAIKDKFKAFNASFDDLVAR 572 Query: 303 QTAWRVVDPQLREELKISISEKVLPAYRSFVGRFRGQLEGGRNFAKYIKYNPEDVENQVS 482 ++ ++ ++R L + + P Y F R+ +L+ GR KY KY+ + Q++ Sbjct: 573 HKSF-YMEREVRSVLAREVQAVLEPLYARFYDRYH-ELDKGR--GKYTKYDKGSLSAQLA 628
>EXO70_SCHPO (Q10339) Exocyst complex component exo70| Length = 615 Score = 39.7 bits (91), Expect = 0.006 Identities = 33/156 (21%), Positives = 69/156 (44%), Gaps = 3/156 (1%) Frame = +3 Query: 33 IFLMNNLWYVVQKIKDSELKTLLGDNWIRKRRGQIRRYSTGYLRSSWTRVLACLRDDGLP 212 + L+N Y K +S++ + L D + K + ++YST Y+ W + + D Sbjct: 458 VMLLNISVYFEAKCLESKIASFLQDVDLEKLGDRSQKYSTMYM-EVWRQCSQNMLDSTYT 516 Query: 213 HATGSSSAL---KAALKERFKSFNLAYEELYRTQTAWRVVDPQLREELKISISEKVLPAY 383 + S+ + KE+F++FN + + + + L + + VLP Y Sbjct: 517 KSQNKSTMSAKEREITKEKFRNFNEQVTSVVQVHRESVRFETGVATFLLQEVKKTVLPLY 576 Query: 384 RSFVGRFRGQLEGGRNFAKYIKYNPEDVENQVSDFF 491 + F ++ + +N KYIK+ D+++ ++ F Sbjct: 577 QRFYDKYINS-DFTKNKDKYIKFTKADLDSFITSAF 611
>EXO70_CANAL (Q5AH25) Exocyst complex protein EXO70| Length = 667 Score = 37.7 bits (86), Expect = 0.022 Identities = 23/89 (25%), Positives = 45/89 (50%) Frame = +3 Query: 219 TGSSSALKAALKERFKSFNLAYEELYRTQTAWRVVDPQLREELKISISEKVLPAYRSFVG 398 T S+ K +K+ FK+FN ++EE + D L++ L I + +L Y Sbjct: 578 TNLSNKEKDQVKDLFKNFNESFEEALFNYQKYNFGDAILKKYLSNEIKKLILNTYFKLYD 637 Query: 399 RFRGQLEGGRNFAKYIKYNPEDVENQVSD 485 ++ G + +N +KY+KY+ + E +++ Sbjct: 638 KY-GNSDFTKNKSKYVKYDKLNFEKLLNE 665
>EXO70_GIBZE (Q4ILI9) Exocyst complex protein EXO70| Length = 632 Score = 36.6 bits (83), Expect = 0.049 Identities = 33/169 (19%), Positives = 72/169 (42%), Gaps = 15/169 (8%) Frame = +3 Query: 6 LYDDEALQNIFLMNNLWYVVQKIKDSELKTLLG------DNWIRKRRGQ---------IR 140 L A+ +F+ N++ + + ++ SEL LL + W +K + Sbjct: 461 LMKSRAVAGVFMANSVVIIGRMVQTSELNDLLENKLDILEQWRKKATASYTDICKDLSVH 520 Query: 141 RYSTGYLRSSWTRVLACLRDDGLPHATGSSSALKAALKERFKSFNLAYEELYRTQTAWRV 320 + T + + + + GS K +KE+F FN A++++ ++ Sbjct: 521 LFDTVHTNRTNRPTSGPVDSTSIVKGLGSKD--KDKIKEKFTQFNGAFDDMVSRHKSYS- 577 Query: 321 VDPQLREELKISISEKVLPAYRSFVGRFRGQLEGGRNFAKYIKYNPEDV 467 ++ ++R I +K+ P Y F R+ +++ G+ KY+KY+ + Sbjct: 578 MEREVRRIFGEDIRQKLQPLYERFWDRYH-EIDKGK--GKYVKYDKTSI 623
>EXO70_NEUCR (Q6MFS1) Exocyst complex protein EXO70| Length = 653 Score = 34.7 bits (78), Expect = 0.19 Identities = 36/161 (22%), Positives = 67/161 (41%), Gaps = 15/161 (9%) Frame = +3 Query: 18 EALQNIFLMNNLWYVVQKIKDSELKTLLG------DNWIRKRRG---------QIRRYST 152 +A+ +FL NN+ + + I +S L TLL D W +K I + T Sbjct: 485 KAVIGVFLANNVTVIERMINESGLVTLLQSRLQVLDVWRKKATALYTETCKEISIHLFDT 544 Query: 153 GYLRSSWTRVLACLRDDGLPHATGSSSALKAALKERFKSFNLAYEELYRTQTAWRVVDPQ 332 + + G SS K +K F +FN +E++ + ++ + Sbjct: 545 VHTNRTARPGSGQGMVSSASIMKGLSSKDKEKIKGMFTAFNSGFEDMVARHKQF-TMEKE 603 Query: 333 LREELKISISEKVLPAYRSFVGRFRGQLEGGRNFAKYIKYN 455 +R+ L + + P Y F R+ +++ G+ KY+KY+ Sbjct: 604 VRQMLAQDVQHMLEPLYNRFWDRYH-EIDKGK--GKYVKYD 641
>STK36_MOUSE (Q69ZM6) Serine/threonine-protein kinase 36 (EC 2.7.11.1) (Fused| homolog) Length = 1268 Score = 32.0 bits (71), Expect = 1.2 Identities = 17/43 (39%), Positives = 24/43 (55%) Frame = -2 Query: 456 GCILYTLQNSFPPPAALGTFQQTNGMLEGPSLRWKSSTPLLTE 328 GCILY L PP FQ + +L+ P +RW S+ ++TE Sbjct: 187 GCILYELAVGTPPFYTTSIFQLVSLILKDP-VRWPSTISVITE 228
>STK36_PONPY (Q5RAJ5) Serine/threonine-protein kinase 36 (EC 2.7.11.1) (Fused| homolog) Length = 1315 Score = 31.6 bits (70), Expect = 1.6 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 9/55 (16%) Frame = -2 Query: 456 GCILYTLQNSFPPPAALGTFQQTNGMLEGPSLRWKSSTP---------LLTEDPQ 319 GCILY L PP A FQ + +L+ P +RW S+ LLT+DP+ Sbjct: 187 GCILYELAVGTPPFYATSIFQLVSLILKDP-VRWPSTISPCFKNFLQGLLTKDPR 240
>STK36_HUMAN (Q9NRP7) Serine/threonine-protein kinase 36 (EC 2.7.11.1) (Fused| homolog) Length = 1315 Score = 31.6 bits (70), Expect = 1.6 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 9/55 (16%) Frame = -2 Query: 456 GCILYTLQNSFPPPAALGTFQQTNGMLEGPSLRWKSSTP---------LLTEDPQ 319 GCILY L PP A FQ + +L+ P +RW S+ LLT+DP+ Sbjct: 187 GCILYELAVGTPPFYATSIFQLVSLILKDP-VRWPSTISPCFKNFLQGLLTKDPR 240
>CT112_PONPY (Q5RFT9) Protein C20orf112 homolog| Length = 436 Score = 31.2 bits (69), Expect = 2.1 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%) Frame = -2 Query: 534 SKIDRLIKHSIFSLQRNLRPGSP-HLQGCILYT------LQNSFPPPAALGTFQQTNGML 376 S+ I HS +SL + P + G + Y+ L ++ PPA+L T +NG Sbjct: 307 SRDSAAITHSTYSLPASSYSQDPVYANGGLNYSYRGYGALSSNLQPPASLQTGNHSNGPT 366 Query: 375 EGPSLRWKSSTPLLTEDPQPSMLSVSCITP 286 + S++ +ST T P PS S S P Sbjct: 367 D-LSMKGGASTTSTTPTPTPSSTSTSRPVP 395
>CT112_HUMAN (Q96MY1) Protein C20orf112| Length = 436 Score = 31.2 bits (69), Expect = 2.1 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%) Frame = -2 Query: 534 SKIDRLIKHSIFSLQRNLRPGSP-HLQGCILYT------LQNSFPPPAALGTFQQTNGML 376 S+ I HS +SL + P + G + Y+ L ++ PPA+L T +NG Sbjct: 307 SRDSAAITHSTYSLPASSYSQDPVYANGGLNYSYRGYGALSSNLQPPASLQTGNHSNGPT 366 Query: 375 EGPSLRWKSSTPLLTEDPQPSMLSVSCITP 286 + S++ +ST T P PS S S P Sbjct: 367 D-LSMKGGASTTSTTPTPTPSSTSTSRPVP 395
>EXON_HCMVA (P16789) Alkaline exonuclease (EC 3.1.11.-)| Length = 584 Score = 30.8 bits (68), Expect = 2.7 Identities = 24/84 (28%), Positives = 36/84 (42%) Frame = +3 Query: 6 LYDDEALQNIFLMNNLWYVVQKIKDSELKTLLGDNWIRKRRGQIRRYSTGYLRSSWTRVL 185 ++DDE L ++FLMN + ++ L R +R + T TRV Sbjct: 21 VWDDEPL-SLFLMNTFLLHQEGFRNLPFTVLRLSYAYRIFAKMLRAHGTPVAEDFMTRVA 79 Query: 186 ACLRDDGLPHATGSSSALKAALKE 257 A RD+GL G A +A+ E Sbjct: 80 ALARDEGLRDILGQRHAAEASRAE 103
>HOOK1_MOUSE (Q8BIL5) Hook homolog 1| Length = 728 Score = 30.4 bits (67), Expect = 3.5 Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 7/100 (7%) Frame = +3 Query: 192 LRDDGLPHATGSSSALKAALKERFKSFNLAYEELYRTQTAWRVVDPQLREEL-KISISEK 368 L++ G SSS LK L+ + +EEL + Q + P + + KIS E Sbjct: 531 LQEQGSKSEGESSSKLKQKLEAHMEKLTEVHEELQKKQELIEDLQPDISQNAQKISELEA 590 Query: 369 VLPA----YRSFVGRFRGQLEGGRNFAKYI--KYNPEDVE 470 L ++ R++ LE RN K + K NP E Sbjct: 591 ALQKKDEDMKAMEERYKMYLEKARNVIKTLDPKLNPASAE 630
>HOOK1_HUMAN (Q9UJC3) Hook homolog 1 (h-hook1) (hHK1)| Length = 728 Score = 30.4 bits (67), Expect = 3.5 Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 7/100 (7%) Frame = +3 Query: 192 LRDDGLPHATGSSSALKAALKERFKSFNLAYEELYRTQTAWRVVDPQLREEL-KISISEK 368 L++ G SSS LK L+ + +EEL + Q + P + + + KI+ E Sbjct: 531 LQEQGSKSEGESSSKLKQKLEAHMEKLTEVHEELQKKQELIEDLQPDINQNVQKINELEA 590 Query: 369 VLPA----YRSFVGRFRGQLEGGRNFAKYI--KYNPEDVE 470 L ++ R++ LE RN K + K NP E Sbjct: 591 ALQKKDEDMKAMEERYKMYLEKARNVIKTLDPKLNPASAE 630
>BRCA2_RAT (O35923) Breast cancer type 2 susceptibility protein homolog (Fanconi| anemia group D1 protein homolog) Length = 3343 Score = 30.4 bits (67), Expect = 3.5 Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 11/73 (15%) Frame = -2 Query: 435 QNSFPPPAALGTFQQTNGMLEGPSLRWK-------SSTPLL----TEDPQPSMLSVSCIT 289 Q +F PP + GT T EGPS W S LL D + ++LS + Sbjct: 3226 QKAFQPPRSCGTKYPTPLKKEGPSSPWSRAPFQKASGVSLLDCDSVADEELALLSTQALV 3285 Query: 288 PRKPS*SS*TFPS 250 P S FPS Sbjct: 3286 PHSVGGSEQVFPS 3298
>CALB2_CHICK (P07090) Calretinin (CR)| Length = 269 Score = 30.0 bits (66), Expect = 4.6 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 3/82 (3%) Frame = +3 Query: 228 SSALKAALKERFKSFNLAYEELYR---TQTAWRVVDPQLREELKISISEKVLPAYRSFVG 398 ++ LK L + K N Y+E TQT R+ D +L +S ++LP +F+ Sbjct: 127 ANELKGFLSDLLKKANRPYDEAKLQEYTQTILRMFDMNGDGKLGLSEMSRLLPVQENFLL 186 Query: 399 RFRGQLEGGRNFAKYIKYNPED 464 +F+G F + +D Sbjct: 187 KFQGMKLSSEEFNAIFAFYDKD 208
>MDTO_ECO57 (Q8X5R8) Multidrug resistance protein mdtO| Length = 683 Score = 30.0 bits (66), Expect = 4.6 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 7/95 (7%) Frame = +3 Query: 51 LWYVVQKIKDSELKTLLGDNWIRKRRGQIRRYSTGYLRSSWTRVLACLRDDGLPHATGSS 230 LW +V + + L TL+G W R S + L DD + H T S Sbjct: 157 LWCIVVGLYPTLLMTLIGVLWFPSRA-----------ISQMHQALNDRLDDAISHLTDSL 205 Query: 231 SAL-------KAALKERFKSFNLAYEELYRTQTAW 314 + L +A ++ F LA + +RTQ+AW Sbjct: 206 APLPETRIEREALALQKLNVFCLADDANWRTQSAW 240
>CD44_BOVIN (Q29423) CD44 antigen precursor (Phagocytic glycoprotein I) (PGP-1)| (HUTCH-I) (Extracellular matrix receptor-III) (ECMR-III) (GP90 lymphocyte homing/adhesion receptor) (Hermes antigen) (Hyaluronate receptor) Length = 366 Score = 29.6 bits (65), Expect = 6.0 Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 1/94 (1%) Frame = -2 Query: 330 EDPQPSMLSVSCITPRKPS*SS*TFPSVQP*VHSMNLLHVATHHPSGKLIPWSTRIGGTL 151 ED PS++S S + S S + S +S+ H+ T HPS PWS R T Sbjct: 166 EDINPSVVSPSSPPDDEMSSGSPSERSTSG-GYSIFHTHLPTVHPSRPRRPWSQRAENT- 223 Query: 150 *STSLSDRGAYGSSY-PQAKS*ALNL*SSGQHTT 52 SD YGSS+ P +S + S H++ Sbjct: 224 -----SDTRDYGSSHDPSGRSYTTHASESAGHSS 252
>MDTO_ECOLI (P32715) Multidrug resistance protein mdtO| Length = 683 Score = 29.6 bits (65), Expect = 6.0 Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 7/95 (7%) Frame = +3 Query: 51 LWYVVQKIKDSELKTLLGDNWIRKRRGQIRRYSTGYLRSSWTRVLACLRDDGLPHATGSS 230 LW +V + + L TL+G W R S + L DD + H T S Sbjct: 157 LWCIVVGLYPTLLMTLIGVLWFPSRA-----------ISQMHQALNDRLDDAISHLTDSL 205 Query: 231 SAL-------KAALKERFKSFNLAYEELYRTQTAW 314 + L +A ++ F LA + +RTQ AW Sbjct: 206 APLPETRIEREALALQKLNVFCLADDANWRTQNAW 240
>VGLB_BHV1P (P17471) Glycoprotein I precursor (Glycoprotein GVP-6)| (Glycoprotein 11A) (Glycoprotein 16) (Glycoprotein G130) Length = 928 Score = 29.3 bits (64), Expect = 7.8 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 Query: 123 RRGQIRRYSTGYLRSSWTRVLACLRDDGLPHATGSSSALKAAL 251 RRGQ R G RVLA LR P A G+ +AL AAL Sbjct: 17 RRGQRRHLRPG-------RVLAALRGPAAPGAGGARAALAAAL 52
>VGLB_BHV1C (P12640) Glycoprotein I precursor (Glycoprotein GVP-6)| (Glycoprotein 11A) (Glycoprotein 16) (Glycoprotein G130) (Glycoprotein B) Length = 932 Score = 29.3 bits (64), Expect = 7.8 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 Query: 123 RRGQIRRYSTGYLRSSWTRVLACLRDDGLPHATGSSSALKAAL 251 RRGQ R G RVLA LR P A G+ +AL AAL Sbjct: 17 RRGQRRHLRPG-------RVLAALRGPAAPGAGGARAALAAAL 52 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,358,114 Number of Sequences: 219361 Number of extensions: 1898392 Number of successful extensions: 5911 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 5716 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5895 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
