ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd27m09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_470787.1| Oryza sativa (japonica cultivar-group), mRNA 86 7e-14
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 86 7e-14
3gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genom... 86 7e-14
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 86 7e-14
5ref|XM_470786.1| Oryza sativa (japonica cultivar-group), mRNA 74 3e-10
6ref|XM_470794.1| Oryza sativa (japonica cultivar-group), mRNA 72 1e-09
7dbj|AK063170.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 1e-09
8gb|AY107563.1| Zea mays PCO093543 mRNA sequence 70 4e-09
9ref|XM_470792.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
10ref|XM_877373.1| PREDICTED: Bos taurus similar to Alpha-2-macrog... 44 0.25
11ref|XM_877327.1| PREDICTED: Bos taurus similar to Alpha-2-macrog... 44 0.25
12ref|XM_877276.1| PREDICTED: Bos taurus similar to Alpha-2-macrog... 44 0.25
13ref|XM_877233.1| PREDICTED: Bos taurus similar to Alpha-2-macrog... 44 0.25
14ref|XM_865861.1| PREDICTED: Bos taurus similar to Alpha-2-macrog... 44 0.25
15ref|XM_591612.2| PREDICTED: Bos taurus similar to Alpha-2-macrog... 44 0.25
16ref|XM_470796.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.97
17gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, com... 42 0.97
18ref|XM_573691.1| PREDICTED: Rattus norvegicus similar to myozeni... 42 0.97
19ref|NM_190381.1| Oryza sativa (japonica cultivar-group), predic... 40 3.8
20ref|XM_988711.1| PREDICTED: Mus musculus zinc finger protein 167... 40 3.8
21gb|AC125374.4| Mus musculus BAC clone RP23-438P19 from chromosom... 40 3.8
22gb|AE005847.1| Caulobacter crescentus CB15 section 173 of 359 of... 40 3.8
23gb|BC042569.1| Mus musculus zinc finger protein 167, mRNA (cDNA ... 40 3.8
24dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
25dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
26ref|XM_220206.3| PREDICTED: Rattus norvegicus kringle containing... 40 3.8
27emb|AL160471.5|CNS01RH4 Human chromosome 14 DNA sequence BAC R-3... 40 3.8
28gb|AC165888.18| Mus musculus chromosome 3, clone RP24-352B14, co... 40 3.8
29emb|AL805958.8| Mouse DNA sequence from clone RP23-179F9 on chro... 40 3.8

>ref|XM_470787.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1481

 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 70/79 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtccgcccgctcgtgcacggcgtcaagctgcacgccatcgtcgatgcctgccacagcgcc 60
           |||||||||||||| ||||||| |||||| |||||| ||||||| |||   |||||| ||
Sbjct: 698 gtccgcccgctcgtccacggcgccaagctccacgccgtcgtcgacgccgagcacagctcc 757

                              
Query: 61  accgtcctcgacctcccct 79
           |||||||||||||||||||
Sbjct: 758 accgtcctcgacctcccct 776



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 43/45 (95%)
 Strand = Plus / Plus

                                                        
Query: 247 gccatgacgcacagcttcatcagagcggtggagtgcgagccgcgc 291
           ||||||||||||||||||||||  |||||||||||||||||||||
Sbjct: 941 gccatgacgcacagcttcatcaaggcggtggagtgcgagccgcgc 985



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                            
Query: 1        gtccgcccgctcgtgcacggcgtcaagctgcacgccatcgtcgatgcctgccacagcgcc 60
                |||||||||||||| ||||||| |||||| |||||| ||||||| |||   |||||| ||
Sbjct: 15369838 gtccgcccgctcgtccacggcgccaagctccacgccgtcgtcgacgccgagcacagctcc 15369779

                                   
Query: 61       accgtcctcgacctcccct 79
                |||||||||||||||||||
Sbjct: 15369778 accgtcctcgacctcccct 15369760



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                             
Query: 247      gccatgacgcacagcttcatcagagcggtggagtgcgagccgcgc 291
                ||||||||||||||||||||||  |||||||||||||||||||||
Sbjct: 15369512 gccatgacgcacagcttcatcaaggcggtggagtgcgagccgcgc 15369468



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                            
Query: 19       ggcgtcaagctgcacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccc 78
                ||||| ||||||||||||||| ||||  |||||||||||| |||| | ||||||||||||
Sbjct: 15409757 ggcgtgaagctgcacgccatcatcgacacctgccacagcggcaccatgctcgacctcccc 15409698

                    
Query: 79       tacc 82
                ||||
Sbjct: 15409697 tacc 15409694



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                          
Query: 239      cgatcggcgccatgacgcacagcttcatcagagcggtggagt 280
                ||||||| || |||||| ||||||||||||| ||||||||||
Sbjct: 15401998 cgatcggggcgatgacgtacagcttcatcagggcggtggagt 15401957



 Score = 42.1 bits (21), Expect = 0.97
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 247      gccatgacgcacagcttcatcagagcggtggag 279
                ||||||||| ||||||||||||  |||||||||
Sbjct: 15423436 gccatgacgtacagcttcatcaaggcggtggag 15423404



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>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete
              sequence
          Length = 164705

 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 70/79 (88%)
 Strand = Plus / Plus

                                                                          
Query: 1      gtccgcccgctcgtgcacggcgtcaagctgcacgccatcgtcgatgcctgccacagcgcc 60
              |||||||||||||| ||||||| |||||| |||||| ||||||| |||   |||||| ||
Sbjct: 131688 gtccgcccgctcgtccacggcgccaagctccacgccgtcgtcgacgccgagcacagctcc 131747

                                 
Query: 61     accgtcctcgacctcccct 79
              |||||||||||||||||||
Sbjct: 131748 accgtcctcgacctcccct 131766



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 43/45 (95%)
 Strand = Plus / Plus

                                                           
Query: 247    gccatgacgcacagcttcatcagagcggtggagtgcgagccgcgc 291
              ||||||||||||||||||||||  |||||||||||||||||||||
Sbjct: 132014 gccatgacgcacagcttcatcaaggcggtggagtgcgagccgcgc 132058



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                         
Query: 19    ggcgtcaagctgcacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccc 78
             ||||| ||||||||||||||| ||||  |||||||||||| |||| | ||||||||||||
Sbjct: 91769 ggcgtgaagctgcacgccatcatcgacacctgccacagcggcaccatgctcgacctcccc 91828

                 
Query: 79    tacc 82
             ||||
Sbjct: 91829 tacc 91832



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 239   cgatcggcgccatgacgcacagcttcatcagagcggtggagt 280
             ||||||| || |||||| ||||||||||||| ||||||||||
Sbjct: 99528 cgatcggggcgatgacgtacagcttcatcagggcggtggagt 99569



 Score = 46.1 bits (23), Expect = 0.062
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                    
Query: 25    aagctgcacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccct 79
             ||||| ||||||||||| ||  | |||||||||| |||| |||| ||||||||||
Sbjct: 99221 aagctccacgccatcgtggacacgtgccacagcggcaccatcctggacctcccct 99275



 Score = 42.1 bits (21), Expect = 0.97
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 247   gccatgacgcacagcttcatcagagcggtggag 279
             ||||||||| ||||||||||||  |||||||||
Sbjct: 78090 gccatgacgtacagcttcatcaaggcggtggag 78122



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                            
Query: 1        gtccgcccgctcgtgcacggcgtcaagctgcacgccatcgtcgatgcctgccacagcgcc 60
                |||||||||||||| ||||||| |||||| |||||| ||||||| |||   |||||| ||
Sbjct: 15364372 gtccgcccgctcgtccacggcgccaagctccacgccgtcgtcgacgccgagcacagctcc 15364313

                                   
Query: 61       accgtcctcgacctcccct 79
                |||||||||||||||||||
Sbjct: 15364312 accgtcctcgacctcccct 15364294



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                             
Query: 247      gccatgacgcacagcttcatcagagcggtggagtgcgagccgcgc 291
                ||||||||||||||||||||||  |||||||||||||||||||||
Sbjct: 15364046 gccatgacgcacagcttcatcaaggcggtggagtgcgagccgcgc 15364002



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                            
Query: 19       ggcgtcaagctgcacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccc 78
                ||||| ||||||||||||||| ||||  |||||||||||| |||| | ||||||||||||
Sbjct: 15404291 ggcgtgaagctgcacgccatcatcgacacctgccacagcggcaccatgctcgacctcccc 15404232

                    
Query: 79       tacc 82
                ||||
Sbjct: 15404231 tacc 15404228



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                          
Query: 239      cgatcggcgccatgacgcacagcttcatcagagcggtggagt 280
                ||||||| || |||||| ||||||||||||| ||||||||||
Sbjct: 15396532 cgatcggggcgatgacgtacagcttcatcagggcggtggagt 15396491



 Score = 46.1 bits (23), Expect = 0.062
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                       
Query: 25       aagctgcacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccct 79
                ||||| ||||||||||| ||  | |||||||||| |||| |||| ||||||||||
Sbjct: 15396839 aagctccacgccatcgtggacacgtgccacagcggcaccatcctggacctcccct 15396785



 Score = 42.1 bits (21), Expect = 0.97
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 247      gccatgacgcacagcttcatcagagcggtggag 279
                ||||||||| ||||||||||||  |||||||||
Sbjct: 15417970 gccatgacgtacagcttcatcaaggcggtggag 15417938



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>ref|XM_470786.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 857

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 43/45 (95%)
 Strand = Plus / Plus

                                                        
Query: 247 gccatgacgcacagcttcatcagagcggtggagtgcgagccgcgc 291
           ||||||||||||||||||||||  |||||||||||||||||||||
Sbjct: 284 gccatgacgcacagcttcatcaaggcggtggagtgcgagccgcgc 328



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>ref|XM_470794.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 909

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                       
Query: 19  ggcgtcaagctgcacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccc 78
           ||||| ||||||||||||||| ||||  |||||||||||| |||| | ||||||||||||
Sbjct: 418 ggcgtgaagctgcacgccatcatcgacacctgccacagcggcaccatgctcgacctcccc 477

               
Query: 79  tacc 82
           ||||
Sbjct: 478 tacc 481



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>dbj|AK063170.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-G09, full
           insert sequence
          Length = 1347

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                       
Query: 19  ggcgtcaagctgcacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccc 78
           ||||| ||||||||||||||| ||||  |||||||||||| |||| | ||||||||||||
Sbjct: 452 ggcgtgaagctgcacgccatcatcgacacctgccacagcggcaccatgctcgacctcccc 511

               
Query: 79  tacc 82
           ||||
Sbjct: 512 tacc 515



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>gb|AY107563.1| Zea mays PCO093543 mRNA sequence
          Length = 995

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtccgcccgctcgtgcacggcgtcaagctgcacgccatcgtcgatgcctgccacagcgcc 60
           ||||| ||||| |||| ||||| |||||| |||||| ||||||| || ||||||||||  
Sbjct: 243 gtccggccgctggtgcccggcgccaagctccacgccgtcgtcgacgcgtgccacagcgat 302

                              
Query: 61  accgtcctcgacctcccct 79
            ||||||||||||||||||
Sbjct: 303 tccgtcctcgacctcccct 321



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 119/148 (80%)
 Strand = Plus / Plus

                                                                       
Query: 140 cgggcgcctgcaagggcaccagcggaggccaggccgtgctcatcagtggcagcagcaacg 199
           |||||| |||||||||||| ||||| |||||||| ||||| ||||| |||  |||| |||
Sbjct: 379 cgggcgtctgcaagggcacgagcggcggccaggcggtgcttatcagcggctacagcgacg 438

                                                                       
Query: 200 ggaagagcaacatgagcgtgctgcctgagccctacgccacgatcggcgccatgacgcaca 259
           | || |||||  | ||| ||  ||| ||| ||| |||  || | || |||||||| ||||
Sbjct: 439 gcaaaagcaagttcagcatgacgccggaggcctgcgcggcggtgggggccatgacccaca 498

                                       
Query: 260 gcttcatcagagcggtggagtgcgagcc 287
           |||||||||  |||||||| ||||||||
Sbjct: 499 gcttcatcaaggcggtggaatgcgagcc 526



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>ref|XM_470792.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1203

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 239 cgatcggcgccatgacgcacagcttcatcagagcggtggagt 280
           ||||||| || |||||| ||||||||||||| ||||||||||
Sbjct: 956 cgatcggggcgatgacgtacagcttcatcagggcggtggagt 997



 Score = 46.1 bits (23), Expect = 0.062
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                  
Query: 25  aagctgcacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccct 79
           ||||| ||||||||||| ||  | |||||||||| |||| |||| ||||||||||
Sbjct: 727 aagctccacgccatcgtggacacgtgccacagcggcaccatcctggacctcccct 781



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>ref|XM_877373.1| PREDICTED: Bos taurus similar to Alpha-2-macroglobulin precursor
            (Alpha-2-M), transcript variant 6 (LOC513856), mRNA
          Length = 4896

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 167  gccaggccgtgctcatcagtgg 188
            ||||||||||||||||||||||
Sbjct: 1512 gccaggccgtgctcatcagtgg 1491



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>ref|XM_877327.1| PREDICTED: Bos taurus similar to Alpha-2-macroglobulin precursor
            (Alpha-2-M), transcript variant 5 (LOC513856), mRNA
          Length = 4848

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 167  gccaggccgtgctcatcagtgg 188
            ||||||||||||||||||||||
Sbjct: 1512 gccaggccgtgctcatcagtgg 1491



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>ref|XM_877276.1| PREDICTED: Bos taurus similar to Alpha-2-macroglobulin precursor
            (Alpha-2-M), transcript variant 4 (LOC513856), mRNA
          Length = 4923

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 167  gccaggccgtgctcatcagtgg 188
            ||||||||||||||||||||||
Sbjct: 1512 gccaggccgtgctcatcagtgg 1491



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>ref|XM_877233.1| PREDICTED: Bos taurus similar to Alpha-2-macroglobulin precursor
            (Alpha-2-M), transcript variant 3 (LOC513856), mRNA
          Length = 2803

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 167  gccaggccgtgctcatcagtgg 188
            ||||||||||||||||||||||
Sbjct: 1512 gccaggccgtgctcatcagtgg 1491



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>ref|XM_865861.1| PREDICTED: Bos taurus similar to Alpha-2-macroglobulin precursor
            (Alpha-2-M), transcript variant 2 (LOC513856), mRNA
          Length = 4911

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 167  gccaggccgtgctcatcagtgg 188
            ||||||||||||||||||||||
Sbjct: 1512 gccaggccgtgctcatcagtgg 1491



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>ref|XM_591612.2| PREDICTED: Bos taurus similar to Alpha-2-macroglobulin precursor
            (Alpha-2-M), transcript variant 1 (LOC513856), mRNA
          Length = 5019

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 167  gccaggccgtgctcatcagtgg 188
            ||||||||||||||||||||||
Sbjct: 1512 gccaggccgtgctcatcagtgg 1491



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>ref|XM_470796.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1110

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 247 gccatgacgcacagcttcatcagagcggtggag 279
           ||||||||| ||||||||||||  |||||||||
Sbjct: 883 gccatgacgtacagcttcatcaaggcggtggag 915



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>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence
          Length = 574126

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 113   ggaggtggagggatgagcgcc 133
             |||||||||||||||||||||
Sbjct: 75813 ggaggtggagggatgagcgcc 75833



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>ref|XM_573691.1| PREDICTED: Rattus norvegicus similar to myozenin 1 (LOC498440),
           mRNA
          Length = 1394

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 149 gcaagggcaccagcggaggccaggc 173
           ||||||||| |||||||||||||||
Sbjct: 560 gcaagggcagcagcggaggccaggc 584



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>ref|NM_190381.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2376

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 28   ctgcacgccatcgtcgatgc 47
            ||||||||||||||||||||
Sbjct: 1738 ctgcacgccatcgtcgatgc 1719



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>ref|XM_988711.1| PREDICTED: Mus musculus zinc finger protein 167 (Zfp167), mRNA
          Length = 2400

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 164 gaggccaggccgtgctcatc 183
           ||||||||||||||||||||
Sbjct: 713 gaggccaggccgtgctcatc 694



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>gb|AC125374.4| Mus musculus BAC clone RP23-438P19 from chromosome 9, complete sequence
          Length = 175440

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   gaggccaggccgtgctcatc 183
             ||||||||||||||||||||
Sbjct: 64334 gaggccaggccgtgctcatc 64353



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>gb|AE005847.1| Caulobacter crescentus CB15 section 173 of 359 of the complete genome
          Length = 10886

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 24   caagctgcacgccatcgtcgatgc 47
            ||||||||||| ||||||||||||
Sbjct: 6056 caagctgcacgacatcgtcgatgc 6033



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>gb|BC042569.1| Mus musculus zinc finger protein 167, mRNA (cDNA clone
            IMAGE:3994925), with apparent retained intron
          Length = 3973

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 164  gaggccaggccgtgctcatc 183
            ||||||||||||||||||||
Sbjct: 1367 gaggccaggccgtgctcatc 1348



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 28       ctgcacgccatcgtcgatgc 47
                ||||||||||||||||||||
Sbjct: 35155167 ctgcacgccatcgtcgatgc 35155148



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>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0031D02
          Length = 183692

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    ctgcacgccatcgtcgatgc 47
             ||||||||||||||||||||
Sbjct: 34251 ctgcacgccatcgtcgatgc 34232



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>ref|XM_220206.3| PREDICTED: Rattus norvegicus kringle containing transmembrane
           protein 2 (predicted) (Kremen2_predicted), mRNA
          Length = 1284

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 ggcagcagcaacgggaagag 206
           ||||||||||||||||||||
Sbjct: 53  ggcagcagcaacgggaagag 34



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>emb|AL160471.5|CNS01RH4 Human chromosome 14 DNA sequence BAC R-304L20 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 193559

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    ctggaggtggagggatgagc 130
              ||||||||||||||||||||
Sbjct: 177719 ctggaggtggagggatgagc 177738



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>gb|AC165888.18| Mus musculus chromosome 3, clone RP24-352B14, complete sequence
          Length = 181505

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    gtgctcatcagtggcagcag 194
              ||||||||||||||||||||
Sbjct: 116162 gtgctcatcagtggcagcag 116143



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>emb|AL805958.8| Mouse DNA sequence from clone RP23-179F9 on chromosome 2, complete
             sequence
          Length = 198627

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    gcaccgtgtccaagcagacc 105
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Sbjct: 55078 gcaccgtgtccaagcagacc 55097


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,994,793
Number of Sequences: 3902068
Number of extensions: 1994793
Number of successful extensions: 36719
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36606
Number of HSP's gapped (non-prelim): 113
length of query: 293
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 271
effective length of database: 17,147,199,772
effective search space: 4646891138212
effective search space used: 4646891138212
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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