ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd27l23 |
|---|---|
| Clone Library Name | barley_pub |
>GUB2_HORVU (P12257) Lichenase-2 precursor (EC 3.2.1.73) (Lichenase II)| (Endo-beta-1,3-1,4 glucanase II) ((1->3,1->4)-beta-glucanase isoenzyme EII) (Fragment) Length = 312 Score = 47.8 bits (112), Expect = 9e-06 Identities = 22/23 (95%), Positives = 22/23 (95%) Frame = +3 Query: 54 PQSVESIGVCYGMSANNLPAAST 122 P SVESIGVCYGMSANNLPAAST Sbjct: 1 PPSVESIGVCYGMSANNLPAAST 23
>E13B_HORVU (P15737) Glucan endo-1,3-beta-glucosidase GII precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase GII) ((1->3)-beta-glucanase isoenzyme GII) (Beta-1,3-endoglucanase GII) Length = 334 Score = 37.7 bits (86), Expect = 0.009 Identities = 15/24 (62%), Positives = 20/24 (83%) Frame = +3 Query: 48 SIPQSVESIGVCYGMSANNLPAAS 119 ++P SV+SIGVCYG+ NNLP+ S Sbjct: 21 AVPTSVQSIGVCYGVIGNNLPSRS 44
>E13B_MAIZE (P49237) Glucan endo-1,3-beta-glucosidase, acidic isoform precursor| (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 335 Score = 37.0 bits (84), Expect = 0.015 Identities = 15/24 (62%), Positives = 20/24 (83%) Frame = +3 Query: 48 SIPQSVESIGVCYGMSANNLPAAS 119 +IP V+SIGVCYG++ +NLP AS Sbjct: 22 AIPTGVQSIGVCYGVNGDNLPPAS 45
>GUB_NICPL (P07979) Lichenase precursor (EC 3.2.1.73) (Endo-beta-1,3-1,4| glucanase) Length = 370 Score = 33.1 bits (74), Expect = 0.22 Identities = 13/18 (72%), Positives = 15/18 (83%) Frame = +3 Query: 66 ESIGVCYGMSANNLPAAS 119 +S+GVCYGM NNLP AS Sbjct: 31 QSVGVCYGMLGNNLPPAS 48
>E13B_PEA (Q03467) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 370 Score = 32.7 bits (73), Expect = 0.29 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +3 Query: 51 IPQSVESIGVCYGMSANNLPAAS 119 IP + IG+CYGM NNLP A+ Sbjct: 27 IPTTDAQIGICYGMMGNNLPPAN 49
>E13B_NICPL (P23431) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform| precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase, basic) Length = 365 Score = 32.0 bits (71), Expect = 0.49 Identities = 13/15 (86%), Positives = 13/15 (86%) Frame = +3 Query: 66 ESIGVCYGMSANNLP 110 ESIGVCYGM NNLP Sbjct: 33 ESIGVCYGMLGNNLP 47
>E13K_TOBAC (P52398) Glucan endo-1,3-beta-glucosidase, acidic isoform GL161| precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 331 Score = 31.6 bits (70), Expect = 0.64 Identities = 12/16 (75%), Positives = 15/16 (93%) Frame = +3 Query: 66 ESIGVCYGMSANNLPA 113 +SIGVCYG +ANNLP+ Sbjct: 10 QSIGVCYGKAANNLPS 25
>E13B_PHAVU (P23535) Glucan endo-1,3-beta-glucosidase, basic isoform precursor| (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 348 Score = 31.2 bits (69), Expect = 0.84 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +3 Query: 72 IGVCYGMSANNLPAAS 119 IGVCYGM NNLP+A+ Sbjct: 2 IGVCYGMMGNNLPSAN 17
>E13B_TOBAC (P15797) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform| precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase, basic) Length = 371 Score = 30.8 bits (68), Expect = 1.1 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = +3 Query: 66 ESIGVCYGMSANNLP 110 +SIGVCYGM NNLP Sbjct: 34 QSIGVCYGMLGNNLP 48
>E13F_TOBAC (P27666) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform| GLB precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase, basic) (Glucanase GLB) Length = 370 Score = 30.8 bits (68), Expect = 1.1 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = +3 Query: 66 ESIGVCYGMSANNLP 110 +SIGVCYGM NNLP Sbjct: 33 QSIGVCYGMLGNNLP 47
>E13E_TOBAC (P23546) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform| GGIB50 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase, basic) (Glucanase GLA) Length = 370 Score = 30.8 bits (68), Expect = 1.1 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = +3 Query: 66 ESIGVCYGMSANNLP 110 +SIGVCYGM NNLP Sbjct: 33 QSIGVCYGMLGNNLP 47
>E13G_TOBAC (P23547) Glucan endo-1,3-beta-glucosidase, acidic isoform GI9| precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-2B) (PR-36) Length = 343 Score = 30.8 bits (68), Expect = 1.1 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +3 Query: 66 ESIGVCYGMSANNLPA 113 +SIGVCYG ANNLP+ Sbjct: 30 QSIGVCYGKHANNLPS 45
>E13A_HORVU (P34742) Glucan endo-1,3-beta-glucosidase GI (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase GI) ((1->3)-beta-glucanase isoenzyme GI) (Beta-1,3-endoglucanase GI) Length = 310 Score = 30.4 bits (67), Expect = 1.4 Identities = 12/17 (70%), Positives = 15/17 (88%) Frame = +3 Query: 69 SIGVCYGMSANNLPAAS 119 +IGVCYG+ ANNLP A+ Sbjct: 1 TIGVCYGVVANNLPPAN 17
>E13L_TOBAC (P52399) Glucan endo-1,3-beta-glucosidase, acidic isoform GL153| precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 356 Score = 30.4 bits (67), Expect = 1.4 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +3 Query: 66 ESIGVCYGMSANNLPA 113 +SIGVCYG ANNLP+ Sbjct: 30 QSIGVCYGKIANNLPS 45
>E13B_LYCES (Q01413) Glucan endo-1,3-beta-glucosidase B precursor (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase B) ((1->3)-beta-glucanase B) (Basic beta-1,3-glucanase) (Beta-1,3-endoglucanase B) Length = 360 Score = 30.0 bits (66), Expect = 1.9 Identities = 12/16 (75%), Positives = 13/16 (81%) Frame = +3 Query: 72 IGVCYGMSANNLPAAS 119 IGVCYGM NNLP+ S Sbjct: 27 IGVCYGMMGNNLPSHS 42
>E13B_HEVBR (P52407) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform| precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) [Contains: Glucan endo-1,3-beta-glucosidase minor form 3; Glucan endo Length = 374 Score = 30.0 bits (66), Expect = 1.9 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = +3 Query: 72 IGVCYGMSANNLPAAS 119 +GVCYGM NNLP S Sbjct: 38 VGVCYGMQGNNLPPVS 53
>E13C_HORVU (Q02126) Glucan endo-1,3-beta-glucosidase GIII precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase GIII) ((1->3)-beta-glucanase isoenzyme GIII) (Beta-1,3-endoglucanase GIII) Length = 330 Score = 29.6 bits (65), Expect = 2.4 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = +3 Query: 60 SVESIGVCYGMSANNLPAAS 119 +V SIGVC G+ NNLPA S Sbjct: 22 AVHSIGVCNGVLGNNLPAPS 41
>MYCL2_HUMAN (P12525) L-myc-2 protein| Length = 357 Score = 29.6 bits (65), Expect = 2.4 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 4/31 (12%) Frame = +1 Query: 4 LPPCWLWHCSSEPSPPSHKAWSPS----GCA 84 +PP W W S EPSP + WSP GCA Sbjct: 36 VPPPWTWVRSREPSP---QLWSPGTWPVGCA 63
>E131_SOLTU (P52400) Glucan endo-1,3-beta-glucosidase, basic isoform 1| precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Fragment) Length = 337 Score = 29.3 bits (64), Expect = 3.2 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +3 Query: 72 IGVCYGMSANNLPAAS 119 +GVCYGM NNLP+ S Sbjct: 1 LGVCYGMMGNNLPSHS 16
>E132_SOLTU (P52401) Glucan endo-1,3-beta-glucosidase, basic isoform 2| precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 363 Score = 29.3 bits (64), Expect = 3.2 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +3 Query: 72 IGVCYGMSANNLPAAS 119 +GVCYGM NNLP+ S Sbjct: 27 LGVCYGMMGNNLPSHS 42
>E13C_TOBAC (P23432) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 351 Score = 28.5 bits (62), Expect = 5.4 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +3 Query: 69 SIGVCYGMSANNLPA 113 +IGVCYG ANNLP+ Sbjct: 35 NIGVCYGKIANNLPS 49
>E13A_LYCES (Q01412) Glucan endo-1,3-beta-glucosidase A precursor (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase A) ((1->3)-beta-glucanase A) (Acidic beta-1,3-glucanase) (Beta-1,3-endoglucanase A) Length = 336 Score = 28.5 bits (62), Expect = 5.4 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +3 Query: 66 ESIGVCYGMSANNLPA 113 + IGVCYG ANNLP+ Sbjct: 24 QPIGVCYGKIANNLPS 39
>E13D_HORVU (Q02437) Glucan endo-1,3-beta-glucosidase GIV (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase GIV) ((1->3)-beta-glucanase isoenzyme GIV) (Beta-1,3-endoglucanase GIV) Length = 327 Score = 28.5 bits (62), Expect = 5.4 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = +3 Query: 72 IGVCYGMSANNLP 110 IGVCYG+ ANNLP Sbjct: 1 IGVCYGIIANNLP 13
>CHIC_SECCE (Q9FRV0) Basic endochitinase C precursor (EC 3.2.1.14) (Rye seed| chitinase-c) (RSC-c) Length = 266 Score = 28.1 bits (61), Expect = 7.1 Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 4/29 (13%) Frame = +1 Query: 16 WLWHCSSEPSPPSHKA----WSPSGCATA 90 W W + P P SH WSPSG A Sbjct: 179 WFWMTAQAPKPSSHAVITGKWSPSGADRA 207
>CHI2_HORVU (P23951) 26 kDa endochitinase 2 precursor (EC 3.2.1.14) (CHI-26)| Length = 266 Score = 28.1 bits (61), Expect = 7.1 Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 4/29 (13%) Frame = +1 Query: 16 WLWHCSSEPSPPSHKA----WSPSGCATA 90 W W + P P SH WSPSG A Sbjct: 179 WFWMTAQPPKPSSHAVIAGQWSPSGADRA 207
>E13D_TOBAC (P23433) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 351 Score = 28.1 bits (61), Expect = 7.1 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +3 Query: 69 SIGVCYGMSANNLPA 113 +IGVCYG ANNLP+ Sbjct: 35 NIGVCYGEIANNLPS 49
>CHIA_SECCE (Q9FRV1) Basic endochitinase A precursor (EC 3.2.1.14) (Rye seed| chitinase-a) (RSC-a) Length = 321 Score = 27.7 bits (60), Expect = 9.3 Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 4/25 (16%) Frame = +1 Query: 16 WLWHCSSEPSPPSHKA----WSPSG 78 W W + P P SH WSPSG Sbjct: 234 WFWMTAQAPKPSSHAVITGQWSPSG 258
>CHI1_HORVU (P11955) 26 kDa endochitinase 1 precursor (EC 3.2.1.14)| Length = 318 Score = 27.7 bits (60), Expect = 9.3 Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 4/25 (16%) Frame = +1 Query: 16 WLWHCSSEPSPPSHKA----WSPSG 78 W W + P P SH WSPSG Sbjct: 231 WFWMTAQAPKPSSHAVITGQWSPSG 255 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,179,726 Number of Sequences: 219361 Number of extensions: 334965 Number of successful extensions: 1437 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 1419 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1437 length of database: 80,573,946 effective HSP length: 16 effective length of database: 77,064,170 effective search space used: 1849540080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
