ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd27l23 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z22874.1|TABETGLUB T.aestivum (1,3;1,4) beta glucanase mRNA, complete CDS Length = 1426 Score = 218 bits (110), Expect = 3e-54 Identities = 119/122 (97%) Strand = Plus / Plus Query: 3 gttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaaagc 62 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66 gttgcctccatgttcgctctggcattgctcctcggagccttcgcctccatcccacaaagc 125 Query: 63 gtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagcacc 122 || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 126 gtcgagtccatcggggtgtgctacggcatgagcgccaacaacctgccggcggcgagcacc 185 Query: 123 gt 124 || Sbjct: 186 gt 187
>gb|BC032056.1| Homo sapiens, clone IMAGE:5193698, mRNA Length = 363 Score = 218 bits (110), Expect = 3e-54 Identities = 119/122 (97%) Strand = Plus / Plus Query: 3 gttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaaagc 62 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94 gttgcctccatgttcgctctggcattgctcctcggagccttcgcctccatcccacaaagc 153 Query: 63 gtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagcacc 122 || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 154 gtcgagtccatcggggtgtgctacggcatgagcgccaacaacctgccggcggcgagcacc 213 Query: 123 gt 124 || Sbjct: 214 gt 215
>emb|Z15131.1|ASBGLUCAN A.sativa mRNA for beta glucanase Length = 1448 Score = 202 bits (102), Expect = 2e-49 Identities = 117/122 (95%) Strand = Plus / Plus Query: 3 gttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaaagc 62 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 43 gttgcctccatgttcgctctcgcattgctcctcggagccttcgcctccatcccacaaagc 102 Query: 63 gtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagcacc 122 |||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 103 gtggagtccatcggcgtttgctacggcatgagcgccaacaacctgccggcggcgagcacc 162 Query: 123 gt 124 || Sbjct: 163 gt 164
>gb|BC028338.1| Homo sapiens, clone IMAGE:5195357, mRNA Length = 363 Score = 198 bits (100), Expect = 3e-48 Identities = 118/124 (95%) Strand = Plus / Plus Query: 1 gcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaaa 60 |||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 84 gcgttgcctccatgttcgctctcgcattgctcctcggggccttcgcctccatcccacaaa 143 Query: 61 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 120 |||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 144 gcgtcgagtccatcggagtgtgctacggcatgagcgccaacaacctgccggcggcgagca 203 Query: 121 ccgt 124 |||| Sbjct: 204 ccgt 207
>gb|DQ294235.1| Triticum aestivum (1,3;1,4) beta-glucanase mRNA, partial cds Length = 913 Score = 196 bits (99), Expect = 1e-47 Identities = 105/107 (98%) Strand = Plus / Plus Query: 18 gctctggcattgctcctcggagccttcgcctccatcccacaaagcgtggagtccatcggg 77 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 5 gctctggcattgctcctcggagccttcgcctccatcccacaaagcgtcgagtccatcggg 64 Query: 78 gtgtgctacggcatgagcgccaacaatctgccggcggcgagcaccgt 124 |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 65 gtgtgctacggcatgagcgccaacaacctgccggcggcgagcaccgt 111
>emb|X52572.1|HVBDG Barley DNA for (1-3,1-4)-beta-D-glucanase (EC 3.2.1.73) Length = 6260 Score = 127 bits (64), Expect = 8e-27 Identities = 64/64 (100%) Strand = Plus / Plus Query: 61 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4540 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 4599 Query: 121 ccgt 124 |||| Sbjct: 4600 ccgt 4603 Score = 121 bits (61), Expect = 5e-25 Identities = 61/61 (100%) Strand = Plus / Plus Query: 1 gcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1990 gcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaaa 2049 Query: 61 g 61 | Sbjct: 2050 g 2050
>emb|X56775.1|HVGLB1 H.vulgare Glb 1 gene for 1-3,1-4-beta-D-glucanase Length = 4849 Score = 127 bits (64), Expect = 8e-27 Identities = 64/64 (100%) Strand = Plus / Plus Query: 61 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3533 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 3592 Query: 121 ccgt 124 |||| Sbjct: 3593 ccgt 3596 Score = 121 bits (61), Expect = 5e-25 Identities = 61/61 (100%) Strand = Plus / Plus Query: 1 gcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 968 gcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaaa 1027 Query: 61 g 61 | Sbjct: 1028 g 1028
>emb|X56260.1|HVGLUEND Barley DNA for (1,3;1,4)-beta-glucanase.(EC number 3.2.1.73) Length = 4643 Score = 127 bits (64), Expect = 8e-27 Identities = 64/64 (100%) Strand = Plus / Plus Query: 61 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3133 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 3192 Query: 121 ccgt 124 |||| Sbjct: 3193 ccgt 3196 Score = 121 bits (61), Expect = 5e-25 Identities = 61/61 (100%) Strand = Plus / Plus Query: 1 gcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 559 gcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaaa 618 Query: 61 g 61 | Sbjct: 619 g 619
>gb|M13237.1|BLYGLUCB Barley beta glucanase mRNA Length = 874 Score = 117 bits (59), Expect = 8e-24 Identities = 68/71 (95%) Strand = Plus / Plus Query: 54 ccacaaagcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcg 113 |||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1 ccaccaagcgtggagtcgatcggggtgtgctacggcatgagcgccaacaacctgccggcg 60 Query: 114 gcgagcaccgt 124 ||||||||||| Sbjct: 61 gcgagcaccgt 71
>ref|XM_475161.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1005 Score = 115 bits (58), Expect = 3e-23 Identities = 100/114 (87%) Strand = Plus / Plus Query: 6 gcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaaagcgtg 65 ||||||||||| ||||| |||||||||||||| ||||| |||||||| || |||| | | Sbjct: 19 gcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattcctcaaaaggcg 78 Query: 66 gagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 ||| | |||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 79 gaggcgatcggggtgtgctacggcatgagcgcgaacaacctgccgccggcgagc 132
>gb|AY768944.1| Oryza sativa (japonica cultivar-group) endo-1,3;1,4-beta-glucanase mRNA, complete cds Length = 1579 Score = 115 bits (58), Expect = 3e-23 Identities = 100/114 (87%) Strand = Plus / Plus Query: 6 gcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaaagcgtg 65 ||||||||||| ||||| |||||||||||||| ||||| |||||||| || |||| | | Sbjct: 130 gcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattcctcaaaaggcg 189 Query: 66 gagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 ||| | |||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 190 gaggcgatcggggtgtgctacggcatgagcgcgaacaacctgccgccggcgagc 243
>gb|AF323610.1|AF323610 Oryza sativa glucanase (GLU) mRNA, complete cds Length = 1573 Score = 115 bits (58), Expect = 3e-23 Identities = 100/114 (87%) Strand = Plus / Plus Query: 6 gcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaaagcgtg 65 ||||||||||| ||||| |||||||||||||| ||||| |||||||| || |||| | | Sbjct: 116 gcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattcctcaaaaggcg 175 Query: 66 gagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 ||| | |||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 176 gaggcgatcggggtgtgctacggcatgagcgcgaacaacctgccgccggcgagc 229
>dbj|AK121825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099G01, full insert sequence Length = 1606 Score = 115 bits (58), Expect = 3e-23 Identities = 100/114 (87%) Strand = Plus / Plus Query: 6 gcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaaagcgtg 65 ||||||||||| ||||| |||||||||||||| ||||| |||||||| || |||| | | Sbjct: 150 gcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattcctcaaaaggcg 209 Query: 66 gagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 ||| | |||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 210 gaggcgatcggggtgtgctacggcatgagcgcgaacaacctgccgccggcgagc 263
>dbj|AK060867.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H03, full insert sequence Length = 1565 Score = 115 bits (58), Expect = 3e-23 Identities = 100/114 (87%) Strand = Plus / Plus Query: 6 gcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaaagcgtg 65 ||||||||||| ||||| |||||||||||||| ||||| |||||||| || |||| | | Sbjct: 146 gcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattcctcaaaaggcg 205 Query: 66 gagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 ||| | |||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 206 gaggcgatcggggtgtgctacggcatgagcgcgaacaacctgccgccggcgagc 259
>emb|Z22873.1|TABETGLUA T.aestivum beta glucanase mRNA, complete CDS Length = 1434 Score = 111 bits (56), Expect = 5e-22 Identities = 62/64 (96%) Strand = Plus / Plus Query: 61 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 120 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 110 gcgtcgagtccatcggggtgtgctacggcatgagcgccaacaacctgccggcggcgagca 169 Query: 121 ccgt 124 |||| Sbjct: 170 ccgt 173
>gb|M62740.1|BLYGLB2 Hordeum vulgare 1,3-1,4-beta-D glucan 4-glucanohydrolase (Glb 2) gene, intron 1 Length = 5159 Score = 111 bits (56), Expect = 5e-22 Identities = 62/64 (96%) Strand = Plus / Plus Query: 61 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 120 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 4061 gcgtggagtcgatcggggtgtgctacggcatgagcgccaacaacctgccggcggcgagca 4120 Query: 121 ccgt 124 |||| Sbjct: 4121 ccgt 4124 Score = 65.9 bits (33), Expect = 3e-08 Identities = 51/57 (89%) Strand = Plus / Plus Query: 1 gcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcccac 57 |||||||||||||||| |||| |||||||| |||||||||||||| || ||||||| Sbjct: 1049 gcgttgcctccatgttcactctcgcattgcttctcggagccttcgcgtctatcccac 1105
>dbj|AB108313.1| Phleum pratense DNA, SSR, microsatellite B02-C07 Length = 564 Score = 87.7 bits (44), Expect = 7e-15 Identities = 57/60 (95%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 3 gttgcctccatgttggctctggcattgctcctc-ggagccttcgcctccatcccacaaag 61 |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| Sbjct: 191 gttgcctccatgttcgctctcgcattgctcctcgggagccttcgcctccatcccacaaag 250
>gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_E12, complete sequence Length = 121293 Score = 71.9 bits (36), Expect = 4e-10 Identities = 45/48 (93%) Strand = Plus / Minus Query: 72 atcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 |||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 94115 atcggggtgtgctacggcatgagcgcgaacaacctgccgccggcgagc 94068 Score = 63.9 bits (32), Expect = 1e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 6 gcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaaag 61 ||||||||||| ||||| |||||||||||||| ||||| |||||||| || ||||| Sbjct: 97333 gcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattcctcaaag 97278
>emb|X58877.1|OSGNS1 Oryza sativa gns1 gene for beta-glucanase Length = 6614 Score = 71.9 bits (36), Expect = 4e-10 Identities = 45/48 (93%) Strand = Plus / Plus Query: 72 atcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 |||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 4518 atcggggtgtgctacggcatgagcgcgaacaacctgccgccggcgagc 4565 Score = 63.9 bits (32), Expect = 1e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 6 gcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaaag 61 ||||||||||| ||||| |||||||||||||| ||||| |||||||| || ||||| Sbjct: 1306 gcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattcctcaaag 1361
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 71.9 bits (36), Expect = 4e-10 Identities = 45/48 (93%) Strand = Plus / Minus Query: 72 atcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 |||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 17963366 atcggggtgtgctacggcatgagcgcgaacaacctgccgccggcgagc 17963319 Score = 63.9 bits (32), Expect = 1e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 6 gcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaaag 61 ||||||||||| ||||| |||||||||||||| ||||| |||||||| || ||||| Sbjct: 17966584 gcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattcctcaaag 17966529
>gb|AC120987.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007A06, complete sequence Length = 148029 Score = 63.9 bits (32), Expect = 1e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 6 gcctccatgttggctctggcattgctcctcggagccttcgcctccatcccacaaag 61 ||||||||||| ||||| |||||||||||||| ||||| |||||||| || ||||| Sbjct: 1911 gcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattcctcaaag 1856
>ref|NM_189709.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 999 Score = 58.0 bits (29), Expect = 6e-06 Identities = 47/53 (88%) Strand = Plus / Plus Query: 67 agtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 ||||||| || |||||||||||| ||| || |||||| ||||||||||||||| Sbjct: 71 agtccattggcgtgtgctacggcgtgatcggcaacaacctgccggcggcgagc 123
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 58.0 bits (29), Expect = 6e-06 Identities = 47/53 (88%) Strand = Plus / Plus Query: 67 agtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 ||||||| || |||||||||||| ||| || |||||| ||||||||||||||| Sbjct: 41342332 agtccattggcgtgtgctacggcgtgatcggcaacaacctgccggcggcgagc 41342384 Score = 42.1 bits (21), Expect = 0.37 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 tccatcggggtgtgctacggcatga 93 |||||||| |||||||||||||||| Sbjct: 41533245 tccatcggcgtgtgctacggcatga 41533221 Score = 40.1 bits (20), Expect = 1.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatg 92 |||||||| ||||||||||||||| Sbjct: 41622966 tccatcggcgtgtgctacggcatg 41622989 Score = 38.2 bits (19), Expect = 5.8 Identities = 43/51 (84%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 ||||| || |||||||||||| ||| || |||||| |||||| || ||||| Sbjct: 41363321 tccattggcgtgtgctacggcgtgaacggcaacaacctgccgtcgccgagc 41363371
>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432C03 Length = 164394 Score = 58.0 bits (29), Expect = 6e-06 Identities = 47/53 (88%) Strand = Plus / Plus Query: 67 agtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 ||||||| || |||||||||||| ||| || |||||| ||||||||||||||| Sbjct: 33825 agtccattggcgtgtgctacggcgtgatcggcaacaacctgccggcggcgagc 33877 Score = 38.2 bits (19), Expect = 5.8 Identities = 43/51 (84%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 ||||| || |||||||||||| ||| || |||||| |||||| || ||||| Sbjct: 54814 tccattggcgtgtgctacggcgtgaacggcaacaacctgccgtcgccgagc 54864
>gb|U72252.1|OSU72252 Oryza sativa beta-1,3-glucanase precursor (Gns6) gene, complete cds Length = 2169 Score = 58.0 bits (29), Expect = 6e-06 Identities = 47/53 (88%) Strand = Plus / Plus Query: 67 agtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 ||||||| || |||||||||||| ||| || |||||| ||||||||||||||| Sbjct: 1241 agtccattggcgtgtgctacggcgtgatcggcaacaacctgccggcggcgagc 1293
>dbj|AK105972.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F03, full insert sequence Length = 1240 Score = 58.0 bits (29), Expect = 6e-06 Identities = 47/53 (88%) Strand = Plus / Plus Query: 67 agtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 ||||||| || |||||||||||| ||| || |||||| ||||||||||||||| Sbjct: 95 agtccattggcgtgtgctacggcgtgatcggcaacaacctgccggcggcgagc 147
>dbj|AK068247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136H16, full insert sequence Length = 1245 Score = 58.0 bits (29), Expect = 6e-06 Identities = 47/53 (88%) Strand = Plus / Plus Query: 67 agtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 ||||||| || |||||||||||| ||| || |||||| ||||||||||||||| Sbjct: 100 agtccattggcgtgtgctacggcgtgatcggcaacaacctgccggcggcgagc 152
>ref|NM_189749.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1032 Score = 42.1 bits (21), Expect = 0.37 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatga 93 |||||||| |||||||||||||||| Sbjct: 7 tccatcggcgtgtgctacggcatga 31
>gb|M23548.1|BLYGEH Hordeum vulgare 1,3-beta glucan endohydrolase precursor, mRNA, complete cds Length = 1250 Score = 42.1 bits (21), Expect = 0.37 Identities = 33/37 (89%) Strand = Plus / Plus Query: 67 agtccatcggggtgtgctacggcatgagcgccaacaa 103 |||||||||| |||||||||||| ||| || |||||| Sbjct: 127 agtccatcggcgtgtgctacggcgtgatcggcaacaa 163
>dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0614D08 Length = 147548 Score = 42.1 bits (21), Expect = 0.37 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 tccatcggggtgtgctacggcatga 93 |||||||| |||||||||||||||| Sbjct: 89538 tccatcggcgtgtgctacggcatga 89514
>gb|AF030771.1|AF030771 Hordeum vulgare beta-1,3-glucanase 2 (BGL32) gene, complete cds Length = 1242 Score = 42.1 bits (21), Expect = 0.37 Identities = 33/37 (89%) Strand = Plus / Plus Query: 67 agtccatcggggtgtgctacggcatgagcgccaacaa 103 |||||||||| |||||||||||| ||| || |||||| Sbjct: 261 agtccatcggcgtgtgctacggcgtgatcggcaacaa 297
>gb|U72248.1|OSU72248 Oryza sativa beta-1,3-glucanase precursor (Gns2) gene, complete cds Length = 2230 Score = 42.1 bits (21), Expect = 0.37 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatga 93 |||||||| |||||||||||||||| Sbjct: 1301 tccatcggcgtgtgctacggcatga 1325
>dbj|AP003687.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0660F12 Length = 147203 Score = 42.1 bits (21), Expect = 0.37 Identities = 24/25 (96%) Strand = Plus / Minus Query: 69 tccatcggggtgtgctacggcatga 93 |||||||| |||||||||||||||| Sbjct: 101444 tccatcggcgtgtgctacggcatga 101420
>emb|AJ271367.1|HVU271367 Hordeum vulgare mRNA for beta-1,3-glucanase Length = 1257 Score = 42.1 bits (21), Expect = 0.37 Identities = 33/37 (89%) Strand = Plus / Plus Query: 67 agtccatcggggtgtgctacggcatgagcgccaacaa 103 |||||||||| |||||||||||| ||| || |||||| Sbjct: 129 agtccatcggcgtgtgctacggcgtgatcggcaacaa 165
>gb|AY612193.1| Hordeum vulgare beta-1,3-glucanase 2a mRNA, complete cds Length = 1249 Score = 42.1 bits (21), Expect = 0.37 Identities = 45/53 (84%) Strand = Plus / Plus Query: 67 agtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 |||||||||| |||||||||||| ||| || |||| |||||| |||||||| Sbjct: 135 agtccatcggcgtgtgctacggcgtgaacggcaacggtctgccctcggcgagc 187
>ref|XM_463703.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1899 Score = 40.1 bits (20), Expect = 1.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatg 92 |||||||| ||||||||||||||| Sbjct: 967 tccatcggcgtgtgctacggcatg 990
>emb|AJ295946.1|FPR295946 Festuca pratensis mRNA for Glu1 protein Length = 1224 Score = 40.1 bits (20), Expect = 1.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 gagtccatcggggtgtgctacggc 89 ||||||||||| |||||||||||| Sbjct: 134 gagtccatcggcgtgtgctacggc 157
>emb|BX663531.3| Chicken DNA sequence from clone WAG-18M1, complete sequence Length = 111106 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tggctctggcattgctcctc 35 |||||||||||||||||||| Sbjct: 83619 tggctctggcattgctcctc 83600
>dbj|AP003259.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0466H10 Length = 176530 Score = 40.1 bits (20), Expect = 1.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatg 92 |||||||| ||||||||||||||| Sbjct: 38568 tccatcggcgtgtgctacggcatg 38591
>dbj|AP004717.1| Gallus gallus genomic DNA, chromosome 5, clone:161D9, complete sequence Length = 221022 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tggctctggcattgctcctc 35 |||||||||||||||||||| Sbjct: 65499 tggctctggcattgctcctc 65518
>dbj|AK102628.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099K11, full insert sequence Length = 2144 Score = 40.1 bits (20), Expect = 1.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatg 92 |||||||| ||||||||||||||| Sbjct: 1062 tccatcggcgtgtgctacggcatg 1085
>dbj|AK063953.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-F10, full insert sequence Length = 2157 Score = 40.1 bits (20), Expect = 1.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatg 92 |||||||| ||||||||||||||| Sbjct: 1068 tccatcggcgtgtgctacggcatg 1091
>gb|AC159011.2| Gallus gallus BAC clone CH261-107A24 from chromosome unknown, complete sequence Length = 249034 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tggctctggcattgctcctc 35 |||||||||||||||||||| Sbjct: 146727 tggctctggcattgctcctc 146746
>gb|AC154042.1| Drosophila melanogaster clone BACR46E23, complete sequence Length = 181148 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 36 ggagccttcgcctccatcc 54 ||||||||||||||||||| Sbjct: 166014 ggagccttcgcctccatcc 166032
>ref|NM_189716.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1014 Score = 38.2 bits (19), Expect = 5.8 Identities = 43/51 (84%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 ||||| || |||||||||||| ||| || |||||| |||||| || ||||| Sbjct: 82 tccattggcgtgtgctacggcgtgaacggcaacaacctgccgtcgccgagc 132
>ref|XM_476341.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1823 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 ctacggcatgagcgccaac 101 ||||||||||||||||||| Sbjct: 154 ctacggcatgagcgccaac 172
>ref|XM_506127.1| PREDICTED Oryza sativa (japonica cultivar-group), B1026C12.10 mRNA Length = 1875 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 ctacggcatgagcgccaac 101 ||||||||||||||||||| Sbjct: 157 ctacggcatgagcgccaac 175
>ref|XM_957981.1| Neurospora crassa OR74A hypothetical protein (NCU06223.1) partial mRNA Length = 1425 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 33 ctcggagccttcgcctcca 51 ||||||||||||||||||| Sbjct: 669 ctcggagccttcgcctcca 687
>ref|XM_326077.1| Neurospora crassa OR74A hypothetical protein (NCU06223.1) partial mRNA Length = 1425 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 33 ctcggagccttcgcctcca 51 ||||||||||||||||||| Sbjct: 669 ctcggagccttcgcctcca 687
>gb|AC127694.3| Mus musculus BAC clone RP23-235J3 from chromosome 7, complete sequence Length = 225732 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 3 gttgcctccatgttggctc 21 ||||||||||||||||||| Sbjct: 107812 gttgcctccatgttggctc 107794
>gb|BT008929.1| Triticum aestivum clone wde1f.pk002.h7:fis, full insert mRNA sequence Length = 1195 Score = 38.2 bits (19), Expect = 5.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcat 91 |||||||| |||||||||||||| Sbjct: 98 tccatcggcgtgtgctacggcat 120
>emb|Y18212.1|TAY18212 Triticum aestivum mRNA for beta-1,3-endoglucanase Length = 1229 Score = 38.2 bits (19), Expect = 5.8 Identities = 31/35 (88%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatgagcgccaacaa 103 |||||||| |||||||||||| ||| || |||||| Sbjct: 107 tccatcggcgtgtgctacggcgtgatcggcaacaa 141
>gb|DQ090946.1| Triticum aestivum beta-1,3-glucanase mRNA, complete cds Length = 1338 Score = 38.2 bits (19), Expect = 5.8 Identities = 31/35 (88%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatgagcgccaacaa 103 |||||||| |||||||||||| ||| || |||||| Sbjct: 160 tccatcggcgtgtgctacggcgtgatcggcaacaa 194
>gb|DQ078255.1| Triticum aestivum beta-1,3-glucanase mRNA, complete cds Length = 1337 Score = 38.2 bits (19), Expect = 5.8 Identities = 31/35 (88%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatgagcgccaacaa 103 |||||||| |||||||||||| ||| || |||||| Sbjct: 159 tccatcggcgtgtgctacggcgtgatcggcaacaa 193
>gb|AC023691.3| Drosophila melanogaster X BAC RP98-12H1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179892 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 36 ggagccttcgcctccatcc 54 ||||||||||||||||||| Sbjct: 38277 ggagccttcgcctccatcc 38295
>gb|AF112967.1| Triticum aestivum beta-1,3-glucanase precursor (Glb3) mRNA, complete cds Length = 1439 Score = 38.2 bits (19), Expect = 5.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 67 agtccatcggggtgtgctacggc 89 |||||||||| |||||||||||| Sbjct: 158 agtccatcggcgtgtgctacggc 180
>ref|NM_132532.2| Drosophila melanogaster CG15739-RA (CG15739), mRNA Length = 1412 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 36 ggagccttcgcctccatcc 54 ||||||||||||||||||| Sbjct: 662 ggagccttcgcctccatcc 680
>gb|AY070946.1| Drosophila melanogaster RE04130 full length cDNA Length = 1428 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 36 ggagccttcgcctccatcc 54 ||||||||||||||||||| Sbjct: 662 ggagccttcgcctccatcc 680
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 ctacggcatgagcgccaac 101 ||||||||||||||||||| Sbjct: 41812 ctacggcatgagcgccaac 41830
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 106 tgccggcggcgagcaccgt 124 ||||||||||||||||||| Sbjct: 4404659 tgccggcggcgagcaccgt 4404677
>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1026C12 Length = 170240 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 ctacggcatgagcgccaac 101 ||||||||||||||||||| Sbjct: 41111 ctacggcatgagcgccaac 41129
>dbj|AK106932.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-C04, full insert sequence Length = 1823 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 ctacggcatgagcgccaac 101 ||||||||||||||||||| Sbjct: 154 ctacggcatgagcgccaac 172
>dbj|AK100112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006A18, full insert sequence Length = 1875 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 ctacggcatgagcgccaac 101 ||||||||||||||||||| Sbjct: 157 ctacggcatgagcgccaac 175
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 106 tgccggcggcgagcaccgt 124 ||||||||||||||||||| Sbjct: 437224 tgccggcggcgagcaccgt 437242
>gb|AY111812.1| Zea mays CL5254_1 mRNA sequence Length = 740 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 tctgccggcggcgagcacc 122 ||||||||||||||||||| Sbjct: 47 tctgccggcggcgagcacc 65
>gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 of 74 of the complete sequence Length = 308317 Score = 38.2 bits (19), Expect = 5.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 36 ggagccttcgcctccatcc 54 ||||||||||||||||||| Sbjct: 165718 ggagccttcgcctccatcc 165736
>gb|M95407.1|MZE13BGLCN Wuglu; Zea mays; 1292 base-pairs Length = 1265 Score = 38.2 bits (19), Expect = 5.8 Identities = 43/51 (84%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 |||||||| |||||||||||| ||| || | |||| ||||| |||||||| Sbjct: 150 tccatcggcgtgtgctacggcgtgaacggcgacaacctgcccccggcgagc 200
>gb|DQ147118.1| Zea diploperennis isolate d7 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1181 Score = 38.2 bits (19), Expect = 5.8 Identities = 43/51 (84%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 |||||||| |||||||||||| ||| || | |||| ||||| |||||||| Sbjct: 222 tccatcggcgtgtgctacggcgtgaacggcgacaacctgcccccggcgagc 272
>gb|DQ147117.1| Zea diploperennis isolate d6 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1181 Score = 38.2 bits (19), Expect = 5.8 Identities = 43/51 (84%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 |||||||| |||||||||||| ||| || | |||| ||||| |||||||| Sbjct: 222 tccatcggcgtgtgctacggcgtgaacggcgacaacctgcccccggcgagc 272
>gb|DQ147116.1| Zea diploperennis isolate d5 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1181 Score = 38.2 bits (19), Expect = 5.8 Identities = 43/51 (84%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 |||||||| |||||||||||| ||| || | |||| ||||| |||||||| Sbjct: 222 tccatcggcgtgtgctacggcgtgaacggcgacaacctgcccccggcgagc 272
>gb|DQ147115.1| Zea diploperennis isolate d4 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1181 Score = 38.2 bits (19), Expect = 5.8 Identities = 43/51 (84%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 |||||||| |||||||||||| ||| || | |||| ||||| |||||||| Sbjct: 222 tccatcggcgtgtgctacggcgtgaacggcgacaacctgcccccggcgagc 272
>gb|DQ147114.1| Zea diploperennis isolate d3 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1181 Score = 38.2 bits (19), Expect = 5.8 Identities = 43/51 (84%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 |||||||| |||||||||||| ||| || | |||| ||||| |||||||| Sbjct: 222 tccatcggcgtgtgctacggcgtgaacggcgacaacctgcccccggcgagc 272
>gb|DQ147112.1| Zea diploperennis isolate d1 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1181 Score = 38.2 bits (19), Expect = 5.8 Identities = 43/51 (84%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 |||||||| |||||||||||| ||| || | |||| ||||| |||||||| Sbjct: 222 tccatcggcgtgtgctacggcgtgaacggcgacaacctgcccccggcgagc 272
>gb|DQ147110.1| Zea mays subsp. parviglumis isolate p14 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1181 Score = 38.2 bits (19), Expect = 5.8 Identities = 43/51 (84%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 |||||||| |||||||||||| ||| || | |||| ||||| |||||||| Sbjct: 222 tccatcggcgtgtgctacggcgtgaacggcgacaacctgcccccggcgagc 272
>gb|DQ147108.1| Zea mays subsp. parviglumis isolate p12 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1185 Score = 38.2 bits (19), Expect = 5.8 Identities = 43/51 (84%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 |||||||| |||||||||||| ||| || | |||| ||||| |||||||| Sbjct: 226 tccatcggcgtgtgctacggcgtgaacggcgacaacctgcccccggcgagc 276
>gb|DQ147107.1| Zea mays subsp. parviglumis isolate p11 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1186 Score = 38.2 bits (19), Expect = 5.8 Identities = 43/51 (84%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 |||||||| |||||||||||| ||| || | |||| ||||| |||||||| Sbjct: 227 tccatcggcgtgtgctacggcgtgaacggcgacaacctgcccccggcgagc 277
>gb|DQ147106.1| Zea mays subsp. parviglumis isolate p9b truncated pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1120 Score = 38.2 bits (19), Expect = 5.8 Identities = 43/51 (84%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 |||||||| |||||||||||| ||| || | |||| ||||| |||||||| Sbjct: 226 tccatcggcgtgtgctacggcgtgaacggcgacaacctgcccccggcgagc 276
>gb|DQ147099.1| Zea mays subsp. parviglumis isolate p2 pathogenesis-related protein 6 (pr6) gene, complete cds Length = 1182 Score = 38.2 bits (19), Expect = 5.8 Identities = 43/51 (84%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 119 |||||||| |||||||||||| ||| || | |||| ||||| |||||||| Sbjct: 223 tccatcggcgtgtgctacggcgtgaacggcgacaacctgcccccggcgagc 273
>gb|M96940.1|BLYGLCNHIV Hordeum vulgare glucan endo-1,3-beta-glucosidase (isoenzyme IV) gene, 3' end Length = 1813 Score = 38.2 bits (19), Expect = 5.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 69 tccatcggggtgtgctacggcat 91 |||||||| |||||||||||||| Sbjct: 425 tccatcggcgtgtgctacggcat 447 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 768,205 Number of Sequences: 3902068 Number of extensions: 768205 Number of successful extensions: 54813 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 54265 Number of HSP's gapped (non-prelim): 547 length of query: 124 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 103 effective length of database: 17,151,101,840 effective search space: 1766563489520 effective search space used: 1766563489520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
