| Clone Name | basd27l07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK064988.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D07, full insert sequence Length = 3566 Score = 710 bits (358), Expect = 0.0 Identities = 514/566 (90%) Strand = Plus / Plus Query: 18 tgcttttaggcagatggtttgtggttttgatctcttaaggtgtgacggaagatcatatgt 77 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1095 tgcttttaggcagatggtttgtggttttgatctcttaaggtgtgatggaagatcatatgt 1154 Query: 78 ttgtgatgttaatggatggagcttcgtaaaaaactcttacaagtattatgacgatgctgc 137 |||||| ||||||||||||||||| || || ||||| ||||||||||||||||||||||| Sbjct: 1155 ttgtgacgttaatggatggagctttgtgaagaactcgtacaagtattatgacgatgctgc 1214 Query: 138 atgcatcatgcgaaaaatatttcttgatgcaaaagctcctcatctttcatcaaccattcc 197 ||||||| | ||||| |||||||| |||||||| || ||||||||||| |||||||| || Sbjct: 1215 atgcatcttacgaaagatatttctagatgcaaaggcacctcatctttcttcaaccatccc 1274 Query: 198 tccaacccttccttggaaatctaaagcaccagatcagtctactgaaggccttacacgaca 257 ||||| |||||||||||||||||| | ||||| |||| | |||||||| ||||||||||| Sbjct: 1275 tccaagccttccttggaaatctaatgaaccagttcagcccactgaaggtcttacacgaca 1334 Query: 258 aggaagtgggattattggtacattcggtcagtcagaagaactacgctgcgtcattgttgt 317 ||||||||| || ||||| ||||| || |||||||||||| |||| | ||||||||||| Sbjct: 1335 aggaagtggaataattggcacatttgggcagtcagaagaattacgttctgtcattgttgt 1394 Query: 318 gatacgccatggtgatcggacaccaaagcagaaggtgaaactgaaagttacagaggaaaa 377 |||||||||||| |||||||||||||||||||| |||||| |||||||||| |||||||| Sbjct: 1395 gatacgccatggcgatcggacaccaaagcagaaagtgaaattgaaagttactgaggaaaa 1454 Query: 378 acttctaaatttgatgttgaagtacaatggtggaaagccaagagctgagacaaaactgaa 437 ||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1455 actcctgaatttgatgttgaaatacaatggtggaaagccaagagctgagacaaaactgaa 1514 Query: 438 aagtgcagtacaattacaagacttgctagatgcaacaagacaacttgtgccaccaactag 497 |||||| || ||| ||||||||||||||||||| ||||| || ||||| |||||||| || Sbjct: 1515 aagtgccgtgcaactacaagacttgctagatgccacaaggcagcttgtaccaccaacaag 1574 Query: 498 gtcaggtcaggagagtgatagtgatgctgaagatttggagcatattgaaaagcttcggca 557 ||| || | ||| ||||| ||||||||||| |||||||||||||||||||||||||| || Sbjct: 1575 gtctggccgggaaagtgacagtgatgctgaggatttggagcatattgaaaagcttcgtca 1634 Query: 558 agtcaaagcagtactggaggagggtg 583 |||||||||||||||||||||||||| Sbjct: 1635 agtcaaagcagtactggaggagggtg 1660
>gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 genomic sequence, complete sequence Length = 150155 Score = 220 bits (111), Expect = 4e-54 Identities = 183/207 (88%) Strand = Plus / Minus Query: 120 gtattatgacgatgctgcatgcatcatgcgaaaaatatttcttgatgcaaaagctcctca 179 ||||||||||||||||||||||||| | ||||| |||||||| |||||||| || ||||| Sbjct: 101425 gtattatgacgatgctgcatgcatcttacgaaagatatttctagatgcaaaggcacctca 101366 Query: 180 tctttcatcaaccattcctccaacccttccttggaaatctaaagcaccagatcagtctac 239 |||||| |||||||| ||||||| |||||||||||||||||| | ||||| |||| | || Sbjct: 101365 tctttcttcaaccatccctccaagccttccttggaaatctaatgaaccagttcagcccac 101306 Query: 240 tgaaggccttacacgacaaggaagtgggattattggtacattcggtcagtcagaagaact 299 |||||| |||||||||||||||||||| || ||||| ||||| || |||||||||||| | Sbjct: 101305 tgaaggtcttacacgacaaggaagtggaataattggcacatttgggcagtcagaagaatt 101246 Query: 300 acgctgcgtcattgttgtgatacgcca 326 ||| | |||||||||||||||||||| Sbjct: 101245 acgttctgtcattgttgtgatacgcca 101219 Score = 143 bits (72), Expect = 7e-31 Identities = 90/96 (93%) Strand = Plus / Minus Query: 331 gatcggacaccaaagcagaaggtgaaactgaaagttacagaggaaaaacttctaaatttg 390 |||||||||||||||||||| |||||| |||||||||| ||||||||||| || |||||| Sbjct: 101129 gatcggacaccaaagcagaaagtgaaattgaaagttactgaggaaaaactcctgaatttg 101070 Query: 391 atgttgaagtacaatggtggaaagccaagagctgag 426 |||||||| ||||||||||||||||||||||||||| Sbjct: 101069 atgttgaaatacaatggtggaaagccaagagctgag 101034 Score = 131 bits (66), Expect = 3e-27 Identities = 84/90 (93%) Strand = Plus / Minus Query: 33 ggtttgtggttttgatctcttaaggtgtgacggaagatcatatgtttgtgatgttaatgg 92 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 101605 ggtttgtggttttgatctcttaaggtgtgatggaagatcatatgtttgtgacgttaatgg 101546 Query: 93 atggagcttcgtaaaaaactcttacaagta 122 ||||||||| || || ||||| |||||||| Sbjct: 101545 atggagctttgtgaagaactcgtacaagta 101516 Score = 117 bits (59), Expect = 4e-23 Identities = 80/87 (91%) Strand = Plus / Minus Query: 494 ctaggtcaggtcaggagagtgatagtgatgctgaagatttggagcatattgaaaagcttc 553 ||||||| || | ||| ||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 100762 ctaggtctggccgggaaagtgacagtgatgctgaggatttggagcatattgaaaagcttc 100703 Query: 554 ggcaagtcaaagcagtactggaggagg 580 | ||||||||||||||||||||||||| Sbjct: 100702 gtcaagtcaaagcagtactggaggagg 100676 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 425 agacaaaactgaaaagtgcagtacaattacaagacttgctagatgcaacaagacaacttg 484 ||||||||||||||||||| || ||| ||||||||||||||||||| ||||| || |||| Sbjct: 100955 agacaaaactgaaaagtgccgtgcaactacaagacttgctagatgccacaaggcagcttg 100896 Query: 485 tgccaccaactaggt 499 | |||||||| |||| Sbjct: 100895 taccaccaacaaggt 100881
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 220 bits (111), Expect = 4e-54 Identities = 183/207 (88%) Strand = Plus / Plus Query: 120 gtattatgacgatgctgcatgcatcatgcgaaaaatatttcttgatgcaaaagctcctca 179 ||||||||||||||||||||||||| | ||||| |||||||| |||||||| || ||||| Sbjct: 27202970 gtattatgacgatgctgcatgcatcttacgaaagatatttctagatgcaaaggcacctca 27203029 Query: 180 tctttcatcaaccattcctccaacccttccttggaaatctaaagcaccagatcagtctac 239 |||||| |||||||| ||||||| |||||||||||||||||| | ||||| |||| | || Sbjct: 27203030 tctttcttcaaccatccctccaagccttccttggaaatctaatgaaccagttcagcccac 27203089 Query: 240 tgaaggccttacacgacaaggaagtgggattattggtacattcggtcagtcagaagaact 299 |||||| |||||||||||||||||||| || ||||| ||||| || |||||||||||| | Sbjct: 27203090 tgaaggtcttacacgacaaggaagtggaataattggcacatttgggcagtcagaagaatt 27203149 Query: 300 acgctgcgtcattgttgtgatacgcca 326 ||| | |||||||||||||||||||| Sbjct: 27203150 acgttctgtcattgttgtgatacgcca 27203176 Score = 143 bits (72), Expect = 7e-31 Identities = 90/96 (93%) Strand = Plus / Plus Query: 331 gatcggacaccaaagcagaaggtgaaactgaaagttacagaggaaaaacttctaaatttg 390 |||||||||||||||||||| |||||| |||||||||| ||||||||||| || |||||| Sbjct: 27203266 gatcggacaccaaagcagaaagtgaaattgaaagttactgaggaaaaactcctgaatttg 27203325 Query: 391 atgttgaagtacaatggtggaaagccaagagctgag 426 |||||||| ||||||||||||||||||||||||||| Sbjct: 27203326 atgttgaaatacaatggtggaaagccaagagctgag 27203361 Score = 131 bits (66), Expect = 3e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 33 ggtttgtggttttgatctcttaaggtgtgacggaagatcatatgtttgtgatgttaatgg 92 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 27202790 ggtttgtggttttgatctcttaaggtgtgatggaagatcatatgtttgtgacgttaatgg 27202849 Query: 93 atggagcttcgtaaaaaactcttacaagta 122 ||||||||| || || ||||| |||||||| Sbjct: 27202850 atggagctttgtgaagaactcgtacaagta 27202879 Score = 117 bits (59), Expect = 4e-23 Identities = 80/87 (91%) Strand = Plus / Plus Query: 494 ctaggtcaggtcaggagagtgatagtgatgctgaagatttggagcatattgaaaagcttc 553 ||||||| || | ||| ||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 27203633 ctaggtctggccgggaaagtgacagtgatgctgaggatttggagcatattgaaaagcttc 27203692 Query: 554 ggcaagtcaaagcagtactggaggagg 580 | ||||||||||||||||||||||||| Sbjct: 27203693 gtcaagtcaaagcagtactggaggagg 27203719 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 425 agacaaaactgaaaagtgcagtacaattacaagacttgctagatgcaacaagacaacttg 484 ||||||||||||||||||| || ||| ||||||||||||||||||| ||||| || |||| Sbjct: 27203440 agacaaaactgaaaagtgccgtgcaactacaagacttgctagatgccacaaggcagcttg 27203499 Query: 485 tgccaccaactaggt 499 | |||||||| |||| Sbjct: 27203500 taccaccaacaaggt 27203514
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 220 bits (111), Expect = 4e-54 Identities = 183/207 (88%) Strand = Plus / Plus Query: 120 gtattatgacgatgctgcatgcatcatgcgaaaaatatttcttgatgcaaaagctcctca 179 ||||||||||||||||||||||||| | ||||| |||||||| |||||||| || ||||| Sbjct: 27294293 gtattatgacgatgctgcatgcatcttacgaaagatatttctagatgcaaaggcacctca 27294352 Query: 180 tctttcatcaaccattcctccaacccttccttggaaatctaaagcaccagatcagtctac 239 |||||| |||||||| ||||||| |||||||||||||||||| | ||||| |||| | || Sbjct: 27294353 tctttcttcaaccatccctccaagccttccttggaaatctaatgaaccagttcagcccac 27294412 Query: 240 tgaaggccttacacgacaaggaagtgggattattggtacattcggtcagtcagaagaact 299 |||||| |||||||||||||||||||| || ||||| ||||| || |||||||||||| | Sbjct: 27294413 tgaaggtcttacacgacaaggaagtggaataattggcacatttgggcagtcagaagaatt 27294472 Query: 300 acgctgcgtcattgttgtgatacgcca 326 ||| | |||||||||||||||||||| Sbjct: 27294473 acgttctgtcattgttgtgatacgcca 27294499 Score = 143 bits (72), Expect = 7e-31 Identities = 90/96 (93%) Strand = Plus / Plus Query: 331 gatcggacaccaaagcagaaggtgaaactgaaagttacagaggaaaaacttctaaatttg 390 |||||||||||||||||||| |||||| |||||||||| ||||||||||| || |||||| Sbjct: 27294589 gatcggacaccaaagcagaaagtgaaattgaaagttactgaggaaaaactcctgaatttg 27294648 Query: 391 atgttgaagtacaatggtggaaagccaagagctgag 426 |||||||| ||||||||||||||||||||||||||| Sbjct: 27294649 atgttgaaatacaatggtggaaagccaagagctgag 27294684 Score = 131 bits (66), Expect = 3e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 33 ggtttgtggttttgatctcttaaggtgtgacggaagatcatatgtttgtgatgttaatgg 92 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 27294113 ggtttgtggttttgatctcttaaggtgtgatggaagatcatatgtttgtgacgttaatgg 27294172 Query: 93 atggagcttcgtaaaaaactcttacaagta 122 ||||||||| || || ||||| |||||||| Sbjct: 27294173 atggagctttgtgaagaactcgtacaagta 27294202 Score = 117 bits (59), Expect = 4e-23 Identities = 80/87 (91%) Strand = Plus / Plus Query: 494 ctaggtcaggtcaggagagtgatagtgatgctgaagatttggagcatattgaaaagcttc 553 ||||||| || | ||| ||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 27294956 ctaggtctggccgggaaagtgacagtgatgctgaggatttggagcatattgaaaagcttc 27295015 Query: 554 ggcaagtcaaagcagtactggaggagg 580 | ||||||||||||||||||||||||| Sbjct: 27295016 gtcaagtcaaagcagtactggaggagg 27295042 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 425 agacaaaactgaaaagtgcagtacaattacaagacttgctagatgcaacaagacaacttg 484 ||||||||||||||||||| || ||| ||||||||||||||||||| ||||| || |||| Sbjct: 27294763 agacaaaactgaaaagtgccgtgcaactacaagacttgctagatgccacaaggcagcttg 27294822 Query: 485 tgccaccaactaggt 499 | |||||||| |||| Sbjct: 27294823 taccaccaacaaggt 27294837
>ref|NM_121511.1| Arabidopsis thaliana acid phosphatase AT5G15070 mRNA, complete cds Length = 3546 Score = 202 bits (102), Expect = 9e-49 Identities = 345/426 (80%) Strand = Plus / Plus Query: 33 ggtttgtggttttgatctcttaaggtgtgacggaagatcatatgtttgtgatgttaatgg 92 |||||| |||||||||||| || | | ||| ||||| |||||||||||||| || ||||| Sbjct: 1012 ggtttgcggttttgatctcctacgatctgagggaagttcatatgtttgtgacgtaaatgg 1071 Query: 93 atggagcttcgtaaaaaactcttacaagtattatgacgatgctgcatgcatcatgcgaaa 152 |||||| || || || ||||| || |||||||| ||||||||||| || | | || || Sbjct: 1072 atggagttttgtgaagaactcctataagtattacgacgatgctgcttgtgtgctacggaa 1131 Query: 153 aatatttcttgatgcaaaagctcctcatctttcatcaaccattcctccaacccttccttg 212 ||| ||| | |||||||| |||||||||||||| ||||| |||||||| | || || || Sbjct: 1132 aatgtttttggatgcaaaggctcctcatctttcttcaacaattcctcccattctgccatg 1191 Query: 213 gaaatctaaagcaccagatcagtctactgaaggccttacacgacaaggaagtgggattat 272 |||| || | ||| | || |||| |||||| ||||| || ||||||||||| || || Sbjct: 1192 gaaaatcaacgaacctgtccaatctaatgaaggtcttacccgccaaggaagtggcatcat 1251 Query: 273 tggtacattcggtcagtcagaagaactacgctgcgtcattgttgtgatacgccatggtga 332 || || || || |||||||| || |||||||| ||||||| | | | || |||||||| Sbjct: 1252 cggaacttttgggcagtcagaggagctacgctgtgtcattgctattgttcggcatggtga 1311 Query: 333 tcggacaccaaagcagaaggtgaaactgaaagttacagaggaaaaacttctaaatttgat 392 | | || || |||||||| |||||||| |||||||||||||| ||||| |||| |||| Sbjct: 1312 tagaacccccaagcagaaagtgaaactaaaagttacagaggagaaactgttaaacctgat 1371 Query: 393 gttgaagtacaatggtggaaagccaagagctgagacaaaactgaaaagtgcagtacaatt 452 ||||||||||||||| ||||| |||||||||||||||||||| |||| ||| || ||||| Sbjct: 1372 gttgaagtacaatggaggaaaaccaagagctgagacaaaacttaaaactgccgtccaatt 1431 Query: 453 acaaga 458 ||||| Sbjct: 1432 gcaaga 1437
>gb|BT001922.1| Arabidopsis thaliana clone C104767 unknown protein (At5g15070) mRNA, complete cds Length = 3181 Score = 202 bits (102), Expect = 9e-49 Identities = 345/426 (80%) Strand = Plus / Plus Query: 33 ggtttgtggttttgatctcttaaggtgtgacggaagatcatatgtttgtgatgttaatgg 92 |||||| |||||||||||| || | | ||| ||||| |||||||||||||| || ||||| Sbjct: 822 ggtttgcggttttgatctcctacgatctgagggaagttcatatgtttgtgacgtaaatgg 881 Query: 93 atggagcttcgtaaaaaactcttacaagtattatgacgatgctgcatgcatcatgcgaaa 152 |||||| || || || ||||| || |||||||| ||||||||||| || | | || || Sbjct: 882 atggagttttgtgaagaactcctataagtattacgacgatgctgcttgtgtgctacggaa 941 Query: 153 aatatttcttgatgcaaaagctcctcatctttcatcaaccattcctccaacccttccttg 212 ||| ||| | |||||||| |||||||||||||| ||||| |||||||| | || || || Sbjct: 942 aatgtttttggatgcaaaggctcctcatctttcttcaacaattcctcccattctgccatg 1001 Query: 213 gaaatctaaagcaccagatcagtctactgaaggccttacacgacaaggaagtgggattat 272 |||| || | ||| | || |||| |||||| ||||| || ||||||||||| || || Sbjct: 1002 gaaaatcaacgaacctgtccaatctaatgaaggtcttacccgccaaggaagtggcatcat 1061 Query: 273 tggtacattcggtcagtcagaagaactacgctgcgtcattgttgtgatacgccatggtga 332 || || || || |||||||| || |||||||| ||||||| | | | || |||||||| Sbjct: 1062 cggaacttttgggcagtcagaggagctacgctgtgtcattgctattgttcggcatggtga 1121 Query: 333 tcggacaccaaagcagaaggtgaaactgaaagttacagaggaaaaacttctaaatttgat 392 | | || || |||||||| |||||||| |||||||||||||| ||||| |||| |||| Sbjct: 1122 tagaacccccaagcagaaagtgaaactaaaagttacagaggagaaactgttaaacctgat 1181 Query: 393 gttgaagtacaatggtggaaagccaagagctgagacaaaactgaaaagtgcagtacaatt 452 ||||||||||||||| ||||| |||||||||||||||||||| |||| ||| || ||||| Sbjct: 1182 gttgaagtacaatggaggaaaaccaagagctgagacaaaacttaaaactgccgtccaatt 1241 Query: 453 acaaga 458 ||||| Sbjct: 1242 gcaaga 1247
>gb|AY059756.1| Arabidopsis thaliana unknown protein (At5g15070) mRNA, complete cds Length = 3562 Score = 194 bits (98), Expect = 2e-46 Identities = 344/426 (80%) Strand = Plus / Plus Query: 33 ggtttgtggttttgatctcttaaggtgtgacggaagatcatatgtttgtgatgttaatgg 92 |||||| |||||||||||| || | | ||| ||||| |||||||||| ||| || ||||| Sbjct: 1012 ggtttgcggttttgatctcctacgatctgagggaagttcatatgtttttgacgtaaatgg 1071 Query: 93 atggagcttcgtaaaaaactcttacaagtattatgacgatgctgcatgcatcatgcgaaa 152 |||||| || || || ||||| || |||||||| ||||||||||| || | | || || Sbjct: 1072 atggagttttgtgaagaactcctataagtattacgacgatgctgcttgtgtgctacggaa 1131 Query: 153 aatatttcttgatgcaaaagctcctcatctttcatcaaccattcctccaacccttccttg 212 ||| ||| | |||||||| |||||||||||||| ||||| |||||||| | || || || Sbjct: 1132 aatgtttttggatgcaaaggctcctcatctttcttcaacaattcctcccattctgccatg 1191 Query: 213 gaaatctaaagcaccagatcagtctactgaaggccttacacgacaaggaagtgggattat 272 |||| || | ||| | || |||| |||||| ||||| || ||||||||||| || || Sbjct: 1192 gaaaatcaacgaacctgtccaatctaatgaaggtcttacccgccaaggaagtggcatcat 1251 Query: 273 tggtacattcggtcagtcagaagaactacgctgcgtcattgttgtgatacgccatggtga 332 || || || || |||||||| || |||||||| ||||||| | | | || |||||||| Sbjct: 1252 cggaacttttgggcagtcagaggagctacgctgtgtcattgctattgttcggcatggtga 1311 Query: 333 tcggacaccaaagcagaaggtgaaactgaaagttacagaggaaaaacttctaaatttgat 392 | | || || |||||||| |||||||| |||||||||||||| ||||| |||| |||| Sbjct: 1312 tagaacccccaagcagaaagtgaaactaaaagttacagaggagaaactgttaaacctgat 1371 Query: 393 gttgaagtacaatggtggaaagccaagagctgagacaaaactgaaaagtgcagtacaatt 452 ||||||||||||||| ||||| |||||||||||||||||||| |||| ||| || ||||| Sbjct: 1372 gttgaagtacaatggaggaaaaccaagagctgagacaaaacttaaaactgccgtccaatt 1431 Query: 453 acaaga 458 ||||| Sbjct: 1432 gcaaga 1437
>ref|NM_110997.3| Arabidopsis thaliana acid phosphatase AT3G01310 transcript variant AT3G01310.1 mRNA, complete cds Length = 3355 Score = 170 bits (86), Expect = 3e-39 Identities = 302/374 (80%) Strand = Plus / Plus Query: 70 tcatatgtttgtgatgttaatggatggagcttcgtaaaaaactcttacaagtattatgac 129 ||||||||||||||||| ||||||||||| || || || ||||| ||||||||||||||| Sbjct: 1064 tcatatgtttgtgatgtcaatggatggagttttgtgaagaactcatacaagtattatgac 1123 Query: 130 gatgctgcatgcatcatgcgaaaaatatttcttgatgcaaaagctcctcatctttcatca 189 |||||||| || | | | ||||| | | | |||||||||||||||||||| ||||| Sbjct: 1124 gatgctgcgtgtgtgctaaggaaaatgtgtttggatgcaaaagctcctcatctctcatcc 1183 Query: 190 accattcctccaacccttccttggaaatctaaagcaccagatcagtctactgaaggcctt 249 || ||||||| ||| | || ||||| || | ||| | || |||| |||||| || Sbjct: 1184 actcttcctcccaccttgccatggaaggtcaatgaacctgtacaatctaatgaaggtcta 1243 Query: 250 acacgacaaggaagtgggattattggtacattcggtcagtcagaagaactacgctgcgtc 309 || || || |||||||| || || || || || || ||||||||||| ||||| || ||| Sbjct: 1244 actcgccagggaagtggcatcatcggcacttttgggcagtcagaagagctacgttgtgtc 1303 Query: 310 attgttgtgatacgccatggtgatcggacaccaaagcagaaggtgaaactgaaagttaca 369 |||| ||| | || ||||| ||| | || || |||||||| |||||||| ||||||||| Sbjct: 1304 attgctgttgttcgacatggcgatagaactcccaagcagaaagtgaaactaaaagttaca 1363 Query: 370 gaggaaaaacttctaaatttgatgttgaagtacaatggtggaaagccaagagctgagaca 429 ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 1364 gaggaaaaactattaaacctaatgttgaagtacaatggtggaaagccaagagctgagacc 1423 Query: 430 aaactgaaaagtgc 443 ||||| || ||||| Sbjct: 1424 aaacttaagagtgc 1437 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 511 agtgatagtgatgctgaagatttggagcatattgaaaagcttcggcaagtcaaagcagt 569 |||||||||||||| ||||| | || ||| ||| |||||||||||||| |||||||| Sbjct: 1505 agtgatagtgatgcagaagaccttgaacatgctgagaagcttcggcaagttaaagcagt 1563
>ref|NM_001035537.1| Arabidopsis thaliana acid phosphatase AT3G01310 transcript variant AT3G01310.2 mRNA, complete cds Length = 3352 Score = 170 bits (86), Expect = 3e-39 Identities = 302/374 (80%) Strand = Plus / Plus Query: 70 tcatatgtttgtgatgttaatggatggagcttcgtaaaaaactcttacaagtattatgac 129 ||||||||||||||||| ||||||||||| || || || ||||| ||||||||||||||| Sbjct: 1061 tcatatgtttgtgatgtcaatggatggagttttgtgaagaactcatacaagtattatgac 1120 Query: 130 gatgctgcatgcatcatgcgaaaaatatttcttgatgcaaaagctcctcatctttcatca 189 |||||||| || | | | ||||| | | | |||||||||||||||||||| ||||| Sbjct: 1121 gatgctgcgtgtgtgctaaggaaaatgtgtttggatgcaaaagctcctcatctctcatcc 1180 Query: 190 accattcctccaacccttccttggaaatctaaagcaccagatcagtctactgaaggcctt 249 || ||||||| ||| | || ||||| || | ||| | || |||| |||||| || Sbjct: 1181 actcttcctcccaccttgccatggaaggtcaatgaacctgtacaatctaatgaaggtcta 1240 Query: 250 acacgacaaggaagtgggattattggtacattcggtcagtcagaagaactacgctgcgtc 309 || || || |||||||| || || || || || || ||||||||||| ||||| || ||| Sbjct: 1241 actcgccagggaagtggcatcatcggcacttttgggcagtcagaagagctacgttgtgtc 1300 Query: 310 attgttgtgatacgccatggtgatcggacaccaaagcagaaggtgaaactgaaagttaca 369 |||| ||| | || ||||| ||| | || || |||||||| |||||||| ||||||||| Sbjct: 1301 attgctgttgttcgacatggcgatagaactcccaagcagaaagtgaaactaaaagttaca 1360 Query: 370 gaggaaaaacttctaaatttgatgttgaagtacaatggtggaaagccaagagctgagaca 429 ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 1361 gaggaaaaactattaaacctaatgttgaagtacaatggtggaaagccaagagctgagacc 1420 Query: 430 aaactgaaaagtgc 443 ||||| || ||||| Sbjct: 1421 aaacttaagagtgc 1434 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 511 agtgatagtgatgctgaagatttggagcatattgaaaagcttcggcaagtcaaagcagt 569 |||||||||||||| ||||| | || ||| ||| |||||||||||||| |||||||| Sbjct: 1502 agtgatagtgatgcagaagaccttgaacatgctgagaagcttcggcaagttaaagcagt 1560
>gb|AC010676.6|ATAC010676 Arabidopsis thaliana chromosome III BAC T22N4 genomic sequence, complete sequence Length = 58448 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 343 aagcagaaggtgaaactgaaagttacagaggaaaaacttctaaatttgatgttgaagtac 402 |||||||| |||||||| |||||||||||||||||||| |||| | |||||||||||| Sbjct: 40296 aagcagaaagtgaaactaaaagttacagaggaaaaactattaaacctaatgttgaagtac 40355 Query: 403 aatggtggaaagccaagagctgag 426 |||||||||||||||||||||||| Sbjct: 40356 aatggtggaaagccaagagctgag 40379 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 70 tcatatgtttgtgatgttaatggatggagcttcgtaaaaaactcttacaagta 122 ||||||||||||||||| ||||||||||| || || || ||||| |||||||| Sbjct: 39757 tcatatgtttgtgatgtcaatggatggagttttgtgaagaactcatacaagta 39809 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 511 agtgatagtgatgctgaagatttggagcatattgaaaagcttcggcaagtcaaagcagt 569 |||||||||||||| ||||| | || ||| ||| |||||||||||||| |||||||| Sbjct: 40728 agtgatagtgatgcagaagaccttgaacatgctgagaagcttcggcaagttaaagcagt 40786 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 163 gatgcaaaagctcctcatctttcatc 188 |||||||||||||||||||| ||||| Sbjct: 40025 gatgcaaaagctcctcatctctcatc 40050
>gb|AC010870.6|ATAC010870 Arabidopsis thaliana chromosome III BAC T13O15 genomic sequence, complete sequence Length = 86324 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Minus Query: 343 aagcagaaggtgaaactgaaagttacagaggaaaaacttctaaatttgatgttgaagtac 402 |||||||| |||||||| |||||||||||||||||||| |||| | |||||||||||| Sbjct: 1357 aagcagaaagtgaaactaaaagttacagaggaaaaactattaaacctaatgttgaagtac 1298 Query: 403 aatggtggaaagccaagagctgag 426 |||||||||||||||||||||||| Sbjct: 1297 aatggtggaaagccaagagctgag 1274 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 70 tcatatgtttgtgatgttaatggatggagcttcgtaaaaaactcttacaagta 122 ||||||||||||||||| ||||||||||| || || || ||||| |||||||| Sbjct: 1896 tcatatgtttgtgatgtcaatggatggagttttgtgaagaactcatacaagta 1844 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Minus Query: 511 agtgatagtgatgctgaagatttggagcatattgaaaagcttcggcaagtcaaagcagt 569 |||||||||||||| ||||| | || ||| ||| |||||||||||||| |||||||| Sbjct: 925 agtgatagtgatgcagaagaccttgaacatgctgagaagcttcggcaagttaaagcagt 867 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 163 gatgcaaaagctcctcatctttcatc 188 |||||||||||||||||||| ||||| Sbjct: 1628 gatgcaaaagctcctcatctctcatc 1603
>emb|AL391146.1|ATF2G14 Arabidopsis thaliana DNA chromosome 5, BAC clone F2G14 (ESSA project) Length = 85992 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 343 aagcagaaggtgaaactgaaagttacagaggaaaaacttctaaatttgatgttgaagtac 402 |||||||| |||||||| |||||||||||||| ||||| |||| |||||||||||||| Sbjct: 65523 aagcagaaagtgaaactaaaagttacagaggagaaactgttaaacctgatgttgaagtac 65582 Query: 403 aatggtggaaagccaagagctgag 426 ||||| ||||| |||||||||||| Sbjct: 65583 aatggaggaaaaccaagagctgag 65606 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 33 ggtttgtggttttgatctcttaaggtgtgacggaagatcatatgtttgtgatgttaatgg 92 |||||| |||||||||||| || | | ||| ||||| |||||||||||||| || ||||| Sbjct: 64783 ggtttgcggttttgatctcctacgatctgagggaagttcatatgtttgtgacgtaaatgg 64842 Query: 93 atggag 98 |||||| Sbjct: 64843 atggag 64848 Score = 54.0 bits (27), Expect = 5e-04 Identities = 120/151 (79%) Strand = Plus / Plus Query: 163 gatgcaaaagctcctcatctttcatcaaccattcctccaacccttccttggaaatctaaa 222 |||||||| |||||||||||||| ||||| |||||||| | || || |||||| || Sbjct: 65257 gatgcaaaggctcctcatctttcttcaacaattcctcccattctgccatggaaaatcaac 65316 Query: 223 gcaccagatcagtctactgaaggccttacacgacaaggaagtgggattattggtacattc 282 | ||| | || |||| |||||| ||||| || ||||||||||| || || || || || Sbjct: 65317 gaacctgtccaatctaatgaaggtcttacccgccaaggaagtggcatcatcggaactttt 65376 Query: 283 ggtcagtcagaagaactacgctgcgtcattg 313 || |||||||| || |||||||| ||||||| Sbjct: 65377 gggcagtcagaggagctacgctgtgtcattg 65407
>gb|AC151524.2| Medicago truncatula chromosome 7 BAC clone mth2-67a20, complete sequence Length = 99692 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 33 ggtttgtggttttgatctcttaaggtgtgacggaagatcatatgtttgtgatgttaatgg 92 ||||||||| ||||||||||| || ||||| ||| | || |||||||||||||| ||||| Sbjct: 57252 ggtttgtgggtttgatctcttgagatgtgagggacgctcctatgtttgtgatgtgaatgg 57193 Query: 93 atggagcttcgtaaaaaa 110 |||||||||||| ||||| Sbjct: 57192 atggagcttcgtgaaaaa 57175
>dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT40C04, TM0199, complete sequence Length = 123325 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 73 tatgtttgtgatgttaatggatggagcttcgtaaaaaactcttacaagta 122 |||||||||||||| ||||| |||||||| || ||||| ||| ||||||| Sbjct: 45037 tatgtttgtgatgtgaatgggtggagctttgtcaaaaattctcacaagta 45086 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Plus Query: 121 tattatgacgatgctgcatgcatcatgcgaaaaatatttcttgatgcaaaagctcctcat 180 |||||||| |||||||| || | |||| ||||| ||| | ||||||||||| |||||| Sbjct: 45960 tattatgatgatgctgcctgtgtgctgcggaaaatgtttttagatgcaaaagcacctcat 46019 Query: 181 ctttcatcaaccattcctccaac 203 ||||| ||| | ||||| ||||| Sbjct: 46020 ctttcttcagcaattccaccaac 46042 Score = 44.1 bits (22), Expect = 0.51 Identities = 52/62 (83%) Strand = Plus / Plus Query: 346 cagaaggtgaaactgaaagttacagaggaaaaacttctaaatttgatgttgaagtacaat 405 ||||||||||| || |||||||| |||||||| || || || | |||||||| |||||| Sbjct: 46270 cagaaggtgaagctaaaagttactgaggaaaagctgctgaacctaatgttgaaatacaat 46329 Query: 406 gg 407 || Sbjct: 46330 gg 46331 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 543 tgaaaagcttcggcaagtcaaagc 566 |||||||||||| ||||||||||| Sbjct: 47731 tgaaaagcttcgtcaagtcaaagc 47754
>ref|NM_191480.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3273 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Plus Query: 130 gatgctgcatgcatcatgcgaaaaatatttcttgatgcaaaagctcctcatctttcatca 189 |||||||||||||| || | ||||| ||||| |||| |||||||| ||| ||||||| Sbjct: 919 gatgctgcatgcattctgaggaaaatgtttctcgatgataaagctccacatatttcatcc 978 Query: 190 accattcct 198 ||||||||| Sbjct: 979 accattcct 987
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Minus Query: 130 gatgctgcatgcatcatgcgaaaaatatttcttgatgcaaaagctcctcatctttcatca 189 |||||||||||||| || | ||||| ||||| |||| |||||||| ||| ||||||| Sbjct: 32911219 gatgctgcatgcattctgaggaaaatgtttctcgatgataaagctccacatatttcatcc 32911160 Query: 190 accattcct 198 ||||||||| Sbjct: 32911159 accattcct 32911151
>dbj|AP003344.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0413G02 Length = 155633 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Minus Query: 130 gatgctgcatgcatcatgcgaaaaatatttcttgatgcaaaagctcctcatctttcatca 189 |||||||||||||| || | ||||| ||||| |||| |||||||| ||| ||||||| Sbjct: 132624 gatgctgcatgcattctgaggaaaatgtttctcgatgataaagctccacatatttcatcc 132565 Query: 190 accattcct 198 ||||||||| Sbjct: 132564 accattcct 132556
>gb|U88173.1| Caenorhabditis elegans cosmid F46F11, complete sequence Length = 36532 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 64 ggaagatcatatgtttgtgatgttaatggat 94 |||| |||||||||||||||||| ||||||| Sbjct: 29051 ggaaaatcatatgtttgtgatgtcaatggat 29081
>ref|NM_170868.2| Caenorhabditis elegans F46F11.1a (F46F11.1) mRNA, complete cds Length = 4027 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 64 ggaagatcatatgtttgtgatgttaatggat 94 |||| |||||||||||||||||| ||||||| Sbjct: 875 ggaaaatcatatgtttgtgatgtcaatggat 905
>ref|NM_171837.3| Caenorhabditis elegans F46F11.1b (F46F11.1) mRNA, complete cds Length = 3806 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 64 ggaagatcatatgtttgtgatgttaatggat 94 |||| |||||||||||||||||| ||||||| Sbjct: 875 ggaaaatcatatgtttgtgatgtcaatggat 905
>emb|AL663121.1| Human DNA sequence from clone RP11-421P17 on chromosome 1, complete sequence Length = 20050 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 369 agaggaaaaacttctaaatttg 390 |||||||||||||||||||||| Sbjct: 16728 agaggaaaaacttctaaatttg 16707
>emb|CR925754.15| Zebrafish DNA sequence from clone CH211-148J16 in linkage group 6, complete sequence Length = 150312 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 374 aaaaacttctaaatttgatgtt 395 |||||||||||||||||||||| Sbjct: 128189 aaaaacttctaaatttgatgtt 128210
>emb|AL158058.5|CNS01RGJ Human chromosome 14 DNA sequence BAC R-260G13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 180372 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 370 gaggaaaaacttctaaatttgatgttgaag 399 |||||||||| ||||| ||||||||||||| Sbjct: 147652 gaggaaaaacatctaattttgatgttgaag 147623
>emb|AL135858.3|CNS01DVJ Human chromosome 14 DNA sequence BAC R-667E4 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 164628 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 370 gaggaaaaacttctaaatttgatgttgaag 399 |||||||||| ||||| ||||||||||||| Sbjct: 141410 gaggaaaaacatctaattttgatgttgaag 141439
>gb|AC141898.3| Mus musculus BAC clone RP23-155I18 from chromosome 5, complete sequence Length = 232201 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 494 ctaggtcaggtcaggagagtg 514 ||||||||||||||||||||| Sbjct: 146038 ctaggtcaggtcaggagagtg 146018
>gb|AC164080.7| Mus musculus chromosome 1, clone RP23-212E14, complete sequence Length = 205823 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 541 attgaaaagcttcggcaagtcaaag 565 ||||||||||||| ||||||||||| Sbjct: 432 attgaaaagcttctgcaagtcaaag 408
>gb|AC115940.11| Mus musculus chromosome 5, clone RP24-553D12, complete sequence Length = 189685 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 ctaggtcaggtcaggagagtg 514 ||||||||||||||||||||| Sbjct: 162064 ctaggtcaggtcaggagagtg 162084
>ref|XM_786714.1| PREDICTED: Strongylocentrotus purpuratus similar to CG14616-PD, isoform D (LOC586959), partial mRNA Length = 2349 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 64 ggaagatcatatgtttgtgatgttaatggatggagcttcgtaaaaaactcttacaagtat 123 |||||||| ||||| |||||||| ||||||| ||||| || || ||||| | |||||| Sbjct: 994 ggaagatcctatgtgtgtgatgtcaatggattcagctttgtcaagaactcaaataagtat 1053 Query: 124 tatga 128 ||||| Sbjct: 1054 tatga 1058
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 aaatttgatgttgaagtacaa 404 ||||||||||||||||||||| Sbjct: 1601697 aaatttgatgttgaagtacaa 1601677
>gb|AC105162.11| Mus musculus chromosome 1, clone RP24-92O11, complete sequence Length = 177420 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 541 attgaaaagcttcggcaagtcaaag 565 ||||||||||||| ||||||||||| Sbjct: 76850 attgaaaagcttctgcaagtcaaag 76874
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 aaatttgatgttgaagtacaa 404 ||||||||||||||||||||| Sbjct: 1652807 aaatttgatgttgaagtacaa 1652787
>gb|AC112223.2| Homo sapiens chromosome 3 clone RP11-237P23, complete sequence Length = 166745 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 ctgagacaaaactgaaaagtg 442 ||||||||||||||||||||| Sbjct: 165864 ctgagacaaaactgaaaagtg 165844
>gb|AC092054.2| Homo sapiens chromosome 3 clone RP11-437I21, complete sequence Length = 165894 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 ctgagacaaaactgaaaagtg 442 ||||||||||||||||||||| Sbjct: 89821 ctgagacaaaactgaaaagtg 89841
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 aaatttgatgttgaagtacaa 404 ||||||||||||||||||||| Sbjct: 1629473 aaatttgatgttgaagtacaa 1629453
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 aaatttgatgttgaagtacaa 404 ||||||||||||||||||||| Sbjct: 1555512 aaatttgatgttgaagtacaa 1555492
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 aaatttgatgttgaagtacaa 404 ||||||||||||||||||||| Sbjct: 1652309 aaatttgatgttgaagtacaa 1652289
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 aaatttgatgttgaagtacaa 404 ||||||||||||||||||||| Sbjct: 1621942 aaatttgatgttgaagtacaa 1621922
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 aaatttgatgttgaagtacaa 404 ||||||||||||||||||||| Sbjct: 1576395 aaatttgatgttgaagtacaa 1576375
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 aaatttgatgttgaagtacaa 404 ||||||||||||||||||||| Sbjct: 1687163 aaatttgatgttgaagtacaa 1687143
>gb|AC102377.14| Mus musculus chromosome 18, clone RP23-416I22, complete sequence Length = 188005 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 354 gaaactgaaagttacagagga 374 ||||||||||||||||||||| Sbjct: 126335 gaaactgaaagttacagagga 126315
>gb|AC005304.1|AC005304 Homo sapiens chromosome 17, clone hRPK.131_K_5, complete sequence Length = 164017 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 428 caaaactgaaaagtgcagtac 448 ||||||||||||||||||||| Sbjct: 160743 caaaactgaaaagtgcagtac 160723
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 aaatttgatgttgaagtacaa 404 ||||||||||||||||||||| Sbjct: 1531574 aaatttgatgttgaagtacaa 1531554
>gb|U09185.1|BAU09185 Buchnera aphidicola Soh B protease (soh B) gene, partial cds, phosphoribosyl anthranilate transferase (trpD), phosphoribosyl anthranilate isomerase/indoleglycerol phosphate synthase fusion protein (trpC/F), tryptophan synthase beta subunit (trpB), and tryptophan synthase alpha subunit (trpA) genes, complete cds Length = 7152 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 tgcatgcatcatgcgaaaaat 155 ||||||||||||||||||||| Sbjct: 2777 tgcatgcatcatgcgaaaaat 2797
>ref|XM_633341.1| Dictyostelium discoideum hypothetical protein (DDB0186099), partial mRNA Length = 1455 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 tatgtttgtgatgttaatggatgg 96 |||||||||||||| ||||||||| Sbjct: 841 tatgtttgtgatgtaaatggatgg 864
>gb|BT013448.1| Lycopersicon esculentum clone 132103F, mRNA sequence Length = 3113 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 agaaggtgaaactgaaagttacag 370 ||||||||||| |||||||||||| Sbjct: 261 agaaggtgaaaatgaaagttacag 284
>gb|AC123751.6| Mus musculus chromosome 8, clone RP24-187F1, complete sequence Length = 159523 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aacccttccttggaaatcta 220 |||||||||||||||||||| Sbjct: 11952 aacccttccttggaaatcta 11933
>gb|AC101882.14| Mus musculus chromosome 10, clone RP23-394M6, complete sequence Length = 209838 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 tcagtctactgaaggcctta 250 |||||||||||||||||||| Sbjct: 82844 tcagtctactgaaggcctta 82863
>emb|BX470169.7| Zebrafish DNA sequence from clone DKEY-31P8 in linkage group 7, complete sequence Length = 222405 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 325 catggtgatcggacaccaaagcagaaggtgaa 356 ||||| ||||| ||||||||||||||| |||| Sbjct: 118616 catggagatcgcacaccaaagcagaagatgaa 118585
>emb|BX908814.1| Tetraodon nigroviridis Length = 120100 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 aaagcagaaggtgaaactga 361 |||||||||||||||||||| Sbjct: 34664 aaagcagaaggtgaaactga 34683 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 aaagcagaaggtgaaactga 361 |||||||||||||||||||| Sbjct: 19416 aaagcagaaggtgaaactga 19435
>gb|AC163649.3| Mus musculus BAC clone RP24-372B10 from chromosome 3, complete sequence Length = 154740 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 368 cagaggaaaaacttctaaatttga 391 |||| ||||||||||||||||||| Sbjct: 47831 cagatgaaaaacttctaaatttga 47854
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 gacaacttgtgccaccaact 495 |||||||||||||||||||| Sbjct: 585892 gacaacttgtgccaccaact 585873
>dbj|AB230013.1| Aspergillus oryzae cDNA, contig sequence: AoEST6900 Length = 565 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 tgatgttaatggatggagcttcgt 104 |||||||||||| ||||||||||| Sbjct: 256 tgatgttaatggctggagcttcgt 279
>dbj|AP007165.1| Aspergillus oryzae RIB40 genomic DNA, SC124 Length = 249334 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tgatgttaatggatggagcttcgt 104 |||||||||||| ||||||||||| Sbjct: 240168 tgatgttaatggctggagcttcgt 240145
>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome Length = 2685015 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 ctaaatttgatgttgaagta 401 |||||||||||||||||||| Sbjct: 1409133 ctaaatttgatgttgaagta 1409152
>gb|AC092804.2| Homo sapiens chromosome 1 clone RP11-81E23, complete sequence Length = 161398 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 aaaactcttacaagtattat 126 |||||||||||||||||||| Sbjct: 107725 aaaactcttacaagtattat 107706
>ref|XM_679626.1| PREDICTED: Danio rerio similar to CG14616-PD, isoform D (LOC556748), mRNA Length = 2454 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 325 catggtgatcggacaccaaagcagaaggtgaa 356 ||||| ||||| ||||||||||||||| |||| Sbjct: 1201 catggagatcgcacaccaaagcagaagatgaa 1232
>gb|AC116801.9| Mus musculus chromosome 8, clone RP24-337F7, complete sequence Length = 168297 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 aacccttccttggaaatcta 220 |||||||||||||||||||| Sbjct: 4339 aacccttccttggaaatcta 4358
>gb|AF247193.1|AF247193S1 Mus musculus endobrevin (Vamp8) gene, exon 1 Length = 4869 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 gaaactgaaagttacagaggaaaa 377 ||||||||||||| |||||||||| Sbjct: 3649 gaaactgaaagttccagaggaaaa 3672
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 tatgtttgtgatgttaatgg 92 |||||||||||||||||||| Sbjct: 5013045 tatgtttgtgatgttaatgg 5013026
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 564 agcagtactggaggagggtg 583 |||||||||||||||||||| Sbjct: 21408075 agcagtactggaggagggtg 21408094
>gb|AC106858.12| Homo sapiens chromosome 17, clone RP11-347L15, complete sequence Length = 160484 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 gaaagccaagagctgagaca 429 |||||||||||||||||||| Sbjct: 88130 gaaagccaagagctgagaca 88149
>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome Length = 1738505 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 363 agttacagaggaaaaacttctaaa 386 ||||||||||| |||||||||||| Sbjct: 211818 agttacagaggtaaaacttctaaa 211841
>dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020C11 Length = 163328 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 564 agcagtactggaggagggtg 583 |||||||||||||||||||| Sbjct: 3002 agcagtactggaggagggtg 3021
>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1712_E04 Length = 110098 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 564 agcagtactggaggagggtg 583 |||||||||||||||||||| Sbjct: 68028 agcagtactggaggagggtg 68047
>emb|AL928670.6| Zebrafish DNA sequence from clone CH211-258F15, complete sequence Length = 167613 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 325 catggtgatcggacaccaaagcagaaggtgaa 356 ||||| ||||| ||||||||||||||| |||| Sbjct: 160623 catggagatcgcacaccaaagcagaagatgaa 160654
>dbj|AK071816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114O15, full insert sequence Length = 1921 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 tatgtttgtgatgttaatgg 92 |||||||||||||||||||| Sbjct: 1675 tatgtttgtgatgttaatgg 1694
>ref|NM_001012299.1| Sus scrofa secretogranin II (SCG2), mRNA Length = 2395 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 531 tttggagcatattgaaaagcttcggcaa 558 ||||||| |||| ||||||||||||||| Sbjct: 287 tttggagtatatagaaaagcttcggcaa 314
>gb|AC116115.11| Mus musculus chromosome 6, clone RP23-60P18, complete sequence Length = 215571 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 354 gaaactgaaagttacagaggaaaa 377 ||||||||||||| |||||||||| Sbjct: 158732 gaaactgaaagttccagaggaaaa 158709
>gb|AC153617.3| Mus musculus 6 BAC RP23-177G20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199525 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 gaaaaatatttcttgatgca 168 |||||||||||||||||||| Sbjct: 123701 gaaaaatatttcttgatgca 123682
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 tatgtttgtgatgttaatgg 92 |||||||||||||||||||| Sbjct: 5013027 tatgtttgtgatgttaatgg 5013008
>emb|AL831811.5|CNS08CAO Oryza sativa chromosome 12, . BAC OJ1561_A05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 91053 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 tatgtttgtgatgttaatgg 92 |||||||||||||||||||| Sbjct: 56419 tatgtttgtgatgttaatgg 56400
>gb|AY870646.1| Sus scrofa secretogranin II mRNA, complete cds Length = 2395 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 531 tttggagcatattgaaaagcttcggcaa 558 ||||||| |||| ||||||||||||||| Sbjct: 287 tttggagtatatagaaaagcttcggcaa 314
>gb|AC124344.6| Mus musculus BAC clone RP24-448A7 from 3, complete sequence Length = 219818 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 368 cagaggaaaaacttctaaatttga 391 |||| ||||||||||||||||||| Sbjct: 158234 cagatgaaaaacttctaaatttga 158257
>gb|AC171203.1| Mus musculus BAC clone RP24-260O23 from chromosome 9, complete sequence Length = 171374 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 357 actgaaagttacagaggaaaaact 380 ||||||| |||||||||||||||| Sbjct: 128520 actgaaacttacagaggaaaaact 128543
>emb|AL772288.12| Mouse DNA sequence from clone RP23-360H6 on chromosome 4, complete sequence Length = 132015 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acaaggaagtgggattattg 274 |||||||||||||||||||| Sbjct: 42320 acaaggaagtgggattattg 42301
>emb|AL808102.8| Mouse DNA sequence from clone RP23-192O6 on chromosome 2, complete sequence Length = 178743 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 acagaggaaaaacttctaaa 386 |||||||||||||||||||| Sbjct: 161868 acagaggaaaaacttctaaa 161849
>gb|L04278.1|XELSTAGE Xenopus laevis mRNA sequence Length = 3522 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 449 aattacaagacttgctagatgcaa 472 |||| ||||||||||||||||||| Sbjct: 230 aattccaagacttgctagatgcaa 253 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,143,089 Number of Sequences: 3902068 Number of extensions: 6143089 Number of successful extensions: 123878 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 123205 Number of HSP's gapped (non-prelim): 663 length of query: 583 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 560 effective length of database: 17,143,297,704 effective search space: 9600246714240 effective search space used: 9600246714240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)