ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd27l07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK064988.1| Oryza sativa (japonica cultivar-group) cDNA clon... 710 0.0
2gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 genom... 220 4e-54
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 220 4e-54
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 220 4e-54
5ref|NM_121511.1| Arabidopsis thaliana acid phosphatase AT5G15070... 202 9e-49
6gb|BT001922.1| Arabidopsis thaliana clone C104767 unknown protei... 202 9e-49
7gb|AY059756.1| Arabidopsis thaliana unknown protein (At5g15070) ... 194 2e-46
8ref|NM_110997.3| Arabidopsis thaliana acid phosphatase AT3G01310... 170 3e-39
9ref|NM_001035537.1| Arabidopsis thaliana acid phosphatase AT3G01... 170 3e-39
10gb|AC010676.6|ATAC010676 Arabidopsis thaliana chromosome III BAC... 111 3e-21
11gb|AC010870.6|ATAC010870 Arabidopsis thaliana chromosome III BAC... 111 3e-21
12emb|AL391146.1|ATF2G14 Arabidopsis thaliana DNA chromosome 5, BA... 96 2e-16
13gb|AC151524.2| Medicago truncatula chromosome 7 BAC clone mth2-6... 84 6e-13
14dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone... 52 0.002
15ref|NM_191480.1| Oryza sativa (japonica cultivar-group), predic... 50 0.008
16dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
17dbj|AP003344.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
18gb|U88173.1| Caenorhabditis elegans cosmid F46F11, complete sequ... 46 0.13
19ref|NM_170868.2| Caenorhabditis elegans F46F11.1a (F46F11.1) mRN... 46 0.13
20ref|NM_171837.3| Caenorhabditis elegans F46F11.1b (F46F11.1) mRN... 46 0.13
21emb|AL663121.1| Human DNA sequence from clone RP11-421P17 on chr... 44 0.51
22emb|CR925754.15| Zebrafish DNA sequence from clone CH211-148J16 ... 44 0.51
23emb|AL158058.5|CNS01RGJ Human chromosome 14 DNA sequence BAC R-2... 44 0.51
24emb|AL135858.3|CNS01DVJ Human chromosome 14 DNA sequence BAC R-6... 44 0.51
25gb|AC141898.3| Mus musculus BAC clone RP23-155I18 from chromosom... 42 2.0
26gb|AC164080.7| Mus musculus chromosome 1, clone RP23-212E14, com... 42 2.0
27gb|AC115940.11| Mus musculus chromosome 5, clone RP24-553D12, co... 42 2.0
28ref|XM_786714.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 2.0
29emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete g... 42 2.0
30gb|AC105162.11| Mus musculus chromosome 1, clone RP24-92O11, com... 42 2.0
31dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, co... 42 2.0
32gb|AC112223.2| Homo sapiens chromosome 3 clone RP11-237P23, comp... 42 2.0
33gb|AC092054.2| Homo sapiens chromosome 3 clone RP11-437I21, comp... 42 2.0
34gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete... 42 2.0
35gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, co... 42 2.0
36gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, compl... 42 2.0
37dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, com... 42 2.0
38dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic... 42 2.0
39emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA2... 42 2.0
40gb|AC102377.14| Mus musculus chromosome 18, clone RP23-416I22, c... 42 2.0
41gb|AC005304.1|AC005304 Homo sapiens chromosome 17, clone hRPK.13... 42 2.0
42emb|AJ938182.1| Staphylococcus aureus RF122 complete genome 42 2.0
43gb|U09185.1|BAU09185 Buchnera aphidicola Soh B protease (soh B) ... 42 2.0
44ref|XM_633341.1| Dictyostelium discoideum hypothetical protein (... 40 7.9
45gb|BT013448.1| Lycopersicon esculentum clone 132103F, mRNA sequence 40 7.9
46gb|AC123751.6| Mus musculus chromosome 8, clone RP24-187F1, comp... 40 7.9
47gb|AC101882.14| Mus musculus chromosome 10, clone RP23-394M6, co... 40 7.9
48emb|BX470169.7| Zebrafish DNA sequence from clone DKEY-31P8 in l... 40 7.9
49emb|BX908814.1| Tetraodon nigroviridis 40 7.9
50gb|AC163649.3| Mus musculus BAC clone RP24-372B10 from chromosom... 40 7.9
51dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo... 40 7.9
52dbj|AB230013.1| Aspergillus oryzae cDNA, contig sequence: AoEST6900 40 7.9
53dbj|AP007165.1| Aspergillus oryzae RIB40 genomic DNA, SC124 40 7.9
54dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 40 7.9
55gb|AC092804.2| Homo sapiens chromosome 1 clone RP11-81E23, compl... 40 7.9
56ref|XM_679626.1| PREDICTED: Danio rerio similar to CG14616-PD, i... 40 7.9
57gb|AC116801.9| Mus musculus chromosome 8, clone RP24-337F7, comp... 40 7.9
58gb|AF247193.1|AF247193S1 Mus musculus endobrevin (Vamp8) gene, e... 40 7.9
59dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
60dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
61gb|AC106858.12| Homo sapiens chromosome 17, clone RP11-347L15, c... 40 7.9
62dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome 40 7.9
63dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
64dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
65emb|AL928670.6| Zebrafish DNA sequence from clone CH211-258F15, ... 40 7.9
66dbj|AK071816.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
67ref|NM_001012299.1| Sus scrofa secretogranin II (SCG2), mRNA 40 7.9
68gb|AC116115.11| Mus musculus chromosome 6, clone RP23-60P18, com... 40 7.9
69gb|AC153617.3| Mus musculus 6 BAC RP23-177G20 (Roswell Park Canc... 40 7.9
70gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
71emb|AL831811.5|CNS08CAO Oryza sativa chromosome 12, . BAC OJ1561... 40 7.9
72gb|AY870646.1| Sus scrofa secretogranin II mRNA, complete cds 40 7.9
73gb|AC124344.6| Mus musculus BAC clone RP24-448A7 from 3, complet... 40 7.9
74gb|AC171203.1| Mus musculus BAC clone RP24-260O23 from chromosom... 40 7.9
75emb|AL772288.12| Mouse DNA sequence from clone RP23-360H6 on chr... 40 7.9
76emb|AL808102.8| Mouse DNA sequence from clone RP23-192O6 on chro... 40 7.9
77gb|L04278.1|XELSTAGE Xenopus laevis mRNA sequence 40 7.9

>dbj|AK064988.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D07, full
            insert sequence
          Length = 3566

 Score =  710 bits (358), Expect = 0.0
 Identities = 514/566 (90%)
 Strand = Plus / Plus

                                                                        
Query: 18   tgcttttaggcagatggtttgtggttttgatctcttaaggtgtgacggaagatcatatgt 77
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1095 tgcttttaggcagatggtttgtggttttgatctcttaaggtgtgatggaagatcatatgt 1154

                                                                        
Query: 78   ttgtgatgttaatggatggagcttcgtaaaaaactcttacaagtattatgacgatgctgc 137
            |||||| ||||||||||||||||| || || ||||| |||||||||||||||||||||||
Sbjct: 1155 ttgtgacgttaatggatggagctttgtgaagaactcgtacaagtattatgacgatgctgc 1214

                                                                        
Query: 138  atgcatcatgcgaaaaatatttcttgatgcaaaagctcctcatctttcatcaaccattcc 197
            ||||||| | ||||| |||||||| |||||||| || ||||||||||| |||||||| ||
Sbjct: 1215 atgcatcttacgaaagatatttctagatgcaaaggcacctcatctttcttcaaccatccc 1274

                                                                        
Query: 198  tccaacccttccttggaaatctaaagcaccagatcagtctactgaaggccttacacgaca 257
            ||||| |||||||||||||||||| | ||||| |||| | |||||||| |||||||||||
Sbjct: 1275 tccaagccttccttggaaatctaatgaaccagttcagcccactgaaggtcttacacgaca 1334

                                                                        
Query: 258  aggaagtgggattattggtacattcggtcagtcagaagaactacgctgcgtcattgttgt 317
            ||||||||| || ||||| ||||| || |||||||||||| |||| |  |||||||||||
Sbjct: 1335 aggaagtggaataattggcacatttgggcagtcagaagaattacgttctgtcattgttgt 1394

                                                                        
Query: 318  gatacgccatggtgatcggacaccaaagcagaaggtgaaactgaaagttacagaggaaaa 377
            |||||||||||| |||||||||||||||||||| |||||| |||||||||| ||||||||
Sbjct: 1395 gatacgccatggcgatcggacaccaaagcagaaagtgaaattgaaagttactgaggaaaa 1454

                                                                        
Query: 378  acttctaaatttgatgttgaagtacaatggtggaaagccaagagctgagacaaaactgaa 437
            ||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1455 actcctgaatttgatgttgaaatacaatggtggaaagccaagagctgagacaaaactgaa 1514

                                                                        
Query: 438  aagtgcagtacaattacaagacttgctagatgcaacaagacaacttgtgccaccaactag 497
            |||||| || ||| ||||||||||||||||||| ||||| || ||||| |||||||| ||
Sbjct: 1515 aagtgccgtgcaactacaagacttgctagatgccacaaggcagcttgtaccaccaacaag 1574

                                                                        
Query: 498  gtcaggtcaggagagtgatagtgatgctgaagatttggagcatattgaaaagcttcggca 557
            ||| || | ||| ||||| ||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 1575 gtctggccgggaaagtgacagtgatgctgaggatttggagcatattgaaaagcttcgtca 1634

                                      
Query: 558  agtcaaagcagtactggaggagggtg 583
            ||||||||||||||||||||||||||
Sbjct: 1635 agtcaaagcagtactggaggagggtg 1660



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>gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 genomic sequence, complete
              sequence
          Length = 150155

 Score =  220 bits (111), Expect = 4e-54
 Identities = 183/207 (88%)
 Strand = Plus / Minus

                                                                          
Query: 120    gtattatgacgatgctgcatgcatcatgcgaaaaatatttcttgatgcaaaagctcctca 179
              ||||||||||||||||||||||||| | ||||| |||||||| |||||||| || |||||
Sbjct: 101425 gtattatgacgatgctgcatgcatcttacgaaagatatttctagatgcaaaggcacctca 101366

                                                                          
Query: 180    tctttcatcaaccattcctccaacccttccttggaaatctaaagcaccagatcagtctac 239
              |||||| |||||||| ||||||| |||||||||||||||||| | ||||| |||| | ||
Sbjct: 101365 tctttcttcaaccatccctccaagccttccttggaaatctaatgaaccagttcagcccac 101306

                                                                          
Query: 240    tgaaggccttacacgacaaggaagtgggattattggtacattcggtcagtcagaagaact 299
              |||||| |||||||||||||||||||| || ||||| ||||| || |||||||||||| |
Sbjct: 101305 tgaaggtcttacacgacaaggaagtggaataattggcacatttgggcagtcagaagaatt 101246

                                         
Query: 300    acgctgcgtcattgttgtgatacgcca 326
              ||| |  ||||||||||||||||||||
Sbjct: 101245 acgttctgtcattgttgtgatacgcca 101219



 Score =  143 bits (72), Expect = 7e-31
 Identities = 90/96 (93%)
 Strand = Plus / Minus

                                                                          
Query: 331    gatcggacaccaaagcagaaggtgaaactgaaagttacagaggaaaaacttctaaatttg 390
              |||||||||||||||||||| |||||| |||||||||| ||||||||||| || ||||||
Sbjct: 101129 gatcggacaccaaagcagaaagtgaaattgaaagttactgaggaaaaactcctgaatttg 101070

                                                  
Query: 391    atgttgaagtacaatggtggaaagccaagagctgag 426
              |||||||| |||||||||||||||||||||||||||
Sbjct: 101069 atgttgaaatacaatggtggaaagccaagagctgag 101034



 Score =  131 bits (66), Expect = 3e-27
 Identities = 84/90 (93%)
 Strand = Plus / Minus

                                                                          
Query: 33     ggtttgtggttttgatctcttaaggtgtgacggaagatcatatgtttgtgatgttaatgg 92
              |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 101605 ggtttgtggttttgatctcttaaggtgtgatggaagatcatatgtttgtgacgttaatgg 101546

                                            
Query: 93     atggagcttcgtaaaaaactcttacaagta 122
              ||||||||| || || ||||| ||||||||
Sbjct: 101545 atggagctttgtgaagaactcgtacaagta 101516



 Score =  117 bits (59), Expect = 4e-23
 Identities = 80/87 (91%)
 Strand = Plus / Minus

                                                                          
Query: 494    ctaggtcaggtcaggagagtgatagtgatgctgaagatttggagcatattgaaaagcttc 553
              ||||||| || | ||| ||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 100762 ctaggtctggccgggaaagtgacagtgatgctgaggatttggagcatattgaaaagcttc 100703

                                         
Query: 554    ggcaagtcaaagcagtactggaggagg 580
              | |||||||||||||||||||||||||
Sbjct: 100702 gtcaagtcaaagcagtactggaggagg 100676



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                          
Query: 425    agacaaaactgaaaagtgcagtacaattacaagacttgctagatgcaacaagacaacttg 484
              ||||||||||||||||||| || ||| ||||||||||||||||||| ||||| || ||||
Sbjct: 100955 agacaaaactgaaaagtgccgtgcaactacaagacttgctagatgccacaaggcagcttg 100896

                             
Query: 485    tgccaccaactaggt 499
              | |||||||| ||||
Sbjct: 100895 taccaccaacaaggt 100881



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  220 bits (111), Expect = 4e-54
 Identities = 183/207 (88%)
 Strand = Plus / Plus

                                                                            
Query: 120      gtattatgacgatgctgcatgcatcatgcgaaaaatatttcttgatgcaaaagctcctca 179
                ||||||||||||||||||||||||| | ||||| |||||||| |||||||| || |||||
Sbjct: 27202970 gtattatgacgatgctgcatgcatcttacgaaagatatttctagatgcaaaggcacctca 27203029

                                                                            
Query: 180      tctttcatcaaccattcctccaacccttccttggaaatctaaagcaccagatcagtctac 239
                |||||| |||||||| ||||||| |||||||||||||||||| | ||||| |||| | ||
Sbjct: 27203030 tctttcttcaaccatccctccaagccttccttggaaatctaatgaaccagttcagcccac 27203089

                                                                            
Query: 240      tgaaggccttacacgacaaggaagtgggattattggtacattcggtcagtcagaagaact 299
                |||||| |||||||||||||||||||| || ||||| ||||| || |||||||||||| |
Sbjct: 27203090 tgaaggtcttacacgacaaggaagtggaataattggcacatttgggcagtcagaagaatt 27203149

                                           
Query: 300      acgctgcgtcattgttgtgatacgcca 326
                ||| |  ||||||||||||||||||||
Sbjct: 27203150 acgttctgtcattgttgtgatacgcca 27203176



 Score =  143 bits (72), Expect = 7e-31
 Identities = 90/96 (93%)
 Strand = Plus / Plus

                                                                            
Query: 331      gatcggacaccaaagcagaaggtgaaactgaaagttacagaggaaaaacttctaaatttg 390
                |||||||||||||||||||| |||||| |||||||||| ||||||||||| || ||||||
Sbjct: 27203266 gatcggacaccaaagcagaaagtgaaattgaaagttactgaggaaaaactcctgaatttg 27203325

                                                    
Query: 391      atgttgaagtacaatggtggaaagccaagagctgag 426
                |||||||| |||||||||||||||||||||||||||
Sbjct: 27203326 atgttgaaatacaatggtggaaagccaagagctgag 27203361



 Score =  131 bits (66), Expect = 3e-27
 Identities = 84/90 (93%)
 Strand = Plus / Plus

                                                                            
Query: 33       ggtttgtggttttgatctcttaaggtgtgacggaagatcatatgtttgtgatgttaatgg 92
                |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 27202790 ggtttgtggttttgatctcttaaggtgtgatggaagatcatatgtttgtgacgttaatgg 27202849

                                              
Query: 93       atggagcttcgtaaaaaactcttacaagta 122
                ||||||||| || || ||||| ||||||||
Sbjct: 27202850 atggagctttgtgaagaactcgtacaagta 27202879



 Score =  117 bits (59), Expect = 4e-23
 Identities = 80/87 (91%)
 Strand = Plus / Plus

                                                                            
Query: 494      ctaggtcaggtcaggagagtgatagtgatgctgaagatttggagcatattgaaaagcttc 553
                ||||||| || | ||| ||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 27203633 ctaggtctggccgggaaagtgacagtgatgctgaggatttggagcatattgaaaagcttc 27203692

                                           
Query: 554      ggcaagtcaaagcagtactggaggagg 580
                | |||||||||||||||||||||||||
Sbjct: 27203693 gtcaagtcaaagcagtactggaggagg 27203719



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                            
Query: 425      agacaaaactgaaaagtgcagtacaattacaagacttgctagatgcaacaagacaacttg 484
                ||||||||||||||||||| || ||| ||||||||||||||||||| ||||| || ||||
Sbjct: 27203440 agacaaaactgaaaagtgccgtgcaactacaagacttgctagatgccacaaggcagcttg 27203499

                               
Query: 485      tgccaccaactaggt 499
                | |||||||| ||||
Sbjct: 27203500 taccaccaacaaggt 27203514



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  220 bits (111), Expect = 4e-54
 Identities = 183/207 (88%)
 Strand = Plus / Plus

                                                                            
Query: 120      gtattatgacgatgctgcatgcatcatgcgaaaaatatttcttgatgcaaaagctcctca 179
                ||||||||||||||||||||||||| | ||||| |||||||| |||||||| || |||||
Sbjct: 27294293 gtattatgacgatgctgcatgcatcttacgaaagatatttctagatgcaaaggcacctca 27294352

                                                                            
Query: 180      tctttcatcaaccattcctccaacccttccttggaaatctaaagcaccagatcagtctac 239
                |||||| |||||||| ||||||| |||||||||||||||||| | ||||| |||| | ||
Sbjct: 27294353 tctttcttcaaccatccctccaagccttccttggaaatctaatgaaccagttcagcccac 27294412

                                                                            
Query: 240      tgaaggccttacacgacaaggaagtgggattattggtacattcggtcagtcagaagaact 299
                |||||| |||||||||||||||||||| || ||||| ||||| || |||||||||||| |
Sbjct: 27294413 tgaaggtcttacacgacaaggaagtggaataattggcacatttgggcagtcagaagaatt 27294472

                                           
Query: 300      acgctgcgtcattgttgtgatacgcca 326
                ||| |  ||||||||||||||||||||
Sbjct: 27294473 acgttctgtcattgttgtgatacgcca 27294499



 Score =  143 bits (72), Expect = 7e-31
 Identities = 90/96 (93%)
 Strand = Plus / Plus

                                                                            
Query: 331      gatcggacaccaaagcagaaggtgaaactgaaagttacagaggaaaaacttctaaatttg 390
                |||||||||||||||||||| |||||| |||||||||| ||||||||||| || ||||||
Sbjct: 27294589 gatcggacaccaaagcagaaagtgaaattgaaagttactgaggaaaaactcctgaatttg 27294648

                                                    
Query: 391      atgttgaagtacaatggtggaaagccaagagctgag 426
                |||||||| |||||||||||||||||||||||||||
Sbjct: 27294649 atgttgaaatacaatggtggaaagccaagagctgag 27294684



 Score =  131 bits (66), Expect = 3e-27
 Identities = 84/90 (93%)
 Strand = Plus / Plus

                                                                            
Query: 33       ggtttgtggttttgatctcttaaggtgtgacggaagatcatatgtttgtgatgttaatgg 92
                |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 27294113 ggtttgtggttttgatctcttaaggtgtgatggaagatcatatgtttgtgacgttaatgg 27294172

                                              
Query: 93       atggagcttcgtaaaaaactcttacaagta 122
                ||||||||| || || ||||| ||||||||
Sbjct: 27294173 atggagctttgtgaagaactcgtacaagta 27294202



 Score =  117 bits (59), Expect = 4e-23
 Identities = 80/87 (91%)
 Strand = Plus / Plus

                                                                            
Query: 494      ctaggtcaggtcaggagagtgatagtgatgctgaagatttggagcatattgaaaagcttc 553
                ||||||| || | ||| ||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 27294956 ctaggtctggccgggaaagtgacagtgatgctgaggatttggagcatattgaaaagcttc 27295015

                                           
Query: 554      ggcaagtcaaagcagtactggaggagg 580
                | |||||||||||||||||||||||||
Sbjct: 27295016 gtcaagtcaaagcagtactggaggagg 27295042



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                            
Query: 425      agacaaaactgaaaagtgcagtacaattacaagacttgctagatgcaacaagacaacttg 484
                ||||||||||||||||||| || ||| ||||||||||||||||||| ||||| || ||||
Sbjct: 27294763 agacaaaactgaaaagtgccgtgcaactacaagacttgctagatgccacaaggcagcttg 27294822

                               
Query: 485      tgccaccaactaggt 499
                | |||||||| ||||
Sbjct: 27294823 taccaccaacaaggt 27294837



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>ref|NM_121511.1| Arabidopsis thaliana acid phosphatase AT5G15070 mRNA, complete cds
          Length = 3546

 Score =  202 bits (102), Expect = 9e-49
 Identities = 345/426 (80%)
 Strand = Plus / Plus

                                                                        
Query: 33   ggtttgtggttttgatctcttaaggtgtgacggaagatcatatgtttgtgatgttaatgg 92
            |||||| |||||||||||| || | | ||| ||||| |||||||||||||| || |||||
Sbjct: 1012 ggtttgcggttttgatctcctacgatctgagggaagttcatatgtttgtgacgtaaatgg 1071

                                                                        
Query: 93   atggagcttcgtaaaaaactcttacaagtattatgacgatgctgcatgcatcatgcgaaa 152
            |||||| || || || ||||| || |||||||| ||||||||||| ||  |  | || ||
Sbjct: 1072 atggagttttgtgaagaactcctataagtattacgacgatgctgcttgtgtgctacggaa 1131

                                                                        
Query: 153  aatatttcttgatgcaaaagctcctcatctttcatcaaccattcctccaacccttccttg 212
            ||| ||| | |||||||| |||||||||||||| ||||| |||||||| |  || || ||
Sbjct: 1132 aatgtttttggatgcaaaggctcctcatctttcttcaacaattcctcccattctgccatg 1191

                                                                        
Query: 213  gaaatctaaagcaccagatcagtctactgaaggccttacacgacaaggaagtgggattat 272
            ||||   || | ||| |  || |||| |||||| ||||| || ||||||||||| || ||
Sbjct: 1192 gaaaatcaacgaacctgtccaatctaatgaaggtcttacccgccaaggaagtggcatcat 1251

                                                                        
Query: 273  tggtacattcggtcagtcagaagaactacgctgcgtcattgttgtgatacgccatggtga 332
             || || || || |||||||| || |||||||| ||||||| | |  | || ||||||||
Sbjct: 1252 cggaacttttgggcagtcagaggagctacgctgtgtcattgctattgttcggcatggtga 1311

                                                                        
Query: 333  tcggacaccaaagcagaaggtgaaactgaaagttacagaggaaaaacttctaaatttgat 392
            | | || || |||||||| |||||||| |||||||||||||| |||||  ||||  ||||
Sbjct: 1312 tagaacccccaagcagaaagtgaaactaaaagttacagaggagaaactgttaaacctgat 1371

                                                                        
Query: 393  gttgaagtacaatggtggaaagccaagagctgagacaaaactgaaaagtgcagtacaatt 452
            ||||||||||||||| ||||| |||||||||||||||||||| |||| ||| || |||||
Sbjct: 1372 gttgaagtacaatggaggaaaaccaagagctgagacaaaacttaaaactgccgtccaatt 1431

                  
Query: 453  acaaga 458
             |||||
Sbjct: 1432 gcaaga 1437



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>gb|BT001922.1| Arabidopsis thaliana clone C104767 unknown protein (At5g15070) mRNA,
            complete cds
          Length = 3181

 Score =  202 bits (102), Expect = 9e-49
 Identities = 345/426 (80%)
 Strand = Plus / Plus

                                                                        
Query: 33   ggtttgtggttttgatctcttaaggtgtgacggaagatcatatgtttgtgatgttaatgg 92
            |||||| |||||||||||| || | | ||| ||||| |||||||||||||| || |||||
Sbjct: 822  ggtttgcggttttgatctcctacgatctgagggaagttcatatgtttgtgacgtaaatgg 881

                                                                        
Query: 93   atggagcttcgtaaaaaactcttacaagtattatgacgatgctgcatgcatcatgcgaaa 152
            |||||| || || || ||||| || |||||||| ||||||||||| ||  |  | || ||
Sbjct: 882  atggagttttgtgaagaactcctataagtattacgacgatgctgcttgtgtgctacggaa 941

                                                                        
Query: 153  aatatttcttgatgcaaaagctcctcatctttcatcaaccattcctccaacccttccttg 212
            ||| ||| | |||||||| |||||||||||||| ||||| |||||||| |  || || ||
Sbjct: 942  aatgtttttggatgcaaaggctcctcatctttcttcaacaattcctcccattctgccatg 1001

                                                                        
Query: 213  gaaatctaaagcaccagatcagtctactgaaggccttacacgacaaggaagtgggattat 272
            ||||   || | ||| |  || |||| |||||| ||||| || ||||||||||| || ||
Sbjct: 1002 gaaaatcaacgaacctgtccaatctaatgaaggtcttacccgccaaggaagtggcatcat 1061

                                                                        
Query: 273  tggtacattcggtcagtcagaagaactacgctgcgtcattgttgtgatacgccatggtga 332
             || || || || |||||||| || |||||||| ||||||| | |  | || ||||||||
Sbjct: 1062 cggaacttttgggcagtcagaggagctacgctgtgtcattgctattgttcggcatggtga 1121

                                                                        
Query: 333  tcggacaccaaagcagaaggtgaaactgaaagttacagaggaaaaacttctaaatttgat 392
            | | || || |||||||| |||||||| |||||||||||||| |||||  ||||  ||||
Sbjct: 1122 tagaacccccaagcagaaagtgaaactaaaagttacagaggagaaactgttaaacctgat 1181

                                                                        
Query: 393  gttgaagtacaatggtggaaagccaagagctgagacaaaactgaaaagtgcagtacaatt 452
            ||||||||||||||| ||||| |||||||||||||||||||| |||| ||| || |||||
Sbjct: 1182 gttgaagtacaatggaggaaaaccaagagctgagacaaaacttaaaactgccgtccaatt 1241

                  
Query: 453  acaaga 458
             |||||
Sbjct: 1242 gcaaga 1247



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>gb|AY059756.1| Arabidopsis thaliana unknown protein (At5g15070) mRNA, complete cds
          Length = 3562

 Score =  194 bits (98), Expect = 2e-46
 Identities = 344/426 (80%)
 Strand = Plus / Plus

                                                                        
Query: 33   ggtttgtggttttgatctcttaaggtgtgacggaagatcatatgtttgtgatgttaatgg 92
            |||||| |||||||||||| || | | ||| ||||| |||||||||| ||| || |||||
Sbjct: 1012 ggtttgcggttttgatctcctacgatctgagggaagttcatatgtttttgacgtaaatgg 1071

                                                                        
Query: 93   atggagcttcgtaaaaaactcttacaagtattatgacgatgctgcatgcatcatgcgaaa 152
            |||||| || || || ||||| || |||||||| ||||||||||| ||  |  | || ||
Sbjct: 1072 atggagttttgtgaagaactcctataagtattacgacgatgctgcttgtgtgctacggaa 1131

                                                                        
Query: 153  aatatttcttgatgcaaaagctcctcatctttcatcaaccattcctccaacccttccttg 212
            ||| ||| | |||||||| |||||||||||||| ||||| |||||||| |  || || ||
Sbjct: 1132 aatgtttttggatgcaaaggctcctcatctttcttcaacaattcctcccattctgccatg 1191

                                                                        
Query: 213  gaaatctaaagcaccagatcagtctactgaaggccttacacgacaaggaagtgggattat 272
            ||||   || | ||| |  || |||| |||||| ||||| || ||||||||||| || ||
Sbjct: 1192 gaaaatcaacgaacctgtccaatctaatgaaggtcttacccgccaaggaagtggcatcat 1251

                                                                        
Query: 273  tggtacattcggtcagtcagaagaactacgctgcgtcattgttgtgatacgccatggtga 332
             || || || || |||||||| || |||||||| ||||||| | |  | || ||||||||
Sbjct: 1252 cggaacttttgggcagtcagaggagctacgctgtgtcattgctattgttcggcatggtga 1311

                                                                        
Query: 333  tcggacaccaaagcagaaggtgaaactgaaagttacagaggaaaaacttctaaatttgat 392
            | | || || |||||||| |||||||| |||||||||||||| |||||  ||||  ||||
Sbjct: 1312 tagaacccccaagcagaaagtgaaactaaaagttacagaggagaaactgttaaacctgat 1371

                                                                        
Query: 393  gttgaagtacaatggtggaaagccaagagctgagacaaaactgaaaagtgcagtacaatt 452
            ||||||||||||||| ||||| |||||||||||||||||||| |||| ||| || |||||
Sbjct: 1372 gttgaagtacaatggaggaaaaccaagagctgagacaaaacttaaaactgccgtccaatt 1431

                  
Query: 453  acaaga 458
             |||||
Sbjct: 1432 gcaaga 1437



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>ref|NM_110997.3| Arabidopsis thaliana acid phosphatase AT3G01310 transcript variant
            AT3G01310.1 mRNA, complete cds
          Length = 3355

 Score =  170 bits (86), Expect = 3e-39
 Identities = 302/374 (80%)
 Strand = Plus / Plus

                                                                        
Query: 70   tcatatgtttgtgatgttaatggatggagcttcgtaaaaaactcttacaagtattatgac 129
            ||||||||||||||||| ||||||||||| || || || ||||| |||||||||||||||
Sbjct: 1064 tcatatgtttgtgatgtcaatggatggagttttgtgaagaactcatacaagtattatgac 1123

                                                                        
Query: 130  gatgctgcatgcatcatgcgaaaaatatttcttgatgcaaaagctcctcatctttcatca 189
            |||||||| ||  |  |  | ||||| | | | |||||||||||||||||||| ||||| 
Sbjct: 1124 gatgctgcgtgtgtgctaaggaaaatgtgtttggatgcaaaagctcctcatctctcatcc 1183

                                                                        
Query: 190  accattcctccaacccttccttggaaatctaaagcaccagatcagtctactgaaggcctt 249
            ||  ||||||| ||| | || |||||    || | ||| |  || |||| |||||| || 
Sbjct: 1184 actcttcctcccaccttgccatggaaggtcaatgaacctgtacaatctaatgaaggtcta 1243

                                                                        
Query: 250  acacgacaaggaagtgggattattggtacattcggtcagtcagaagaactacgctgcgtc 309
            || || || |||||||| || || || || || || ||||||||||| ||||| || |||
Sbjct: 1244 actcgccagggaagtggcatcatcggcacttttgggcagtcagaagagctacgttgtgtc 1303

                                                                        
Query: 310  attgttgtgatacgccatggtgatcggacaccaaagcagaaggtgaaactgaaagttaca 369
            |||| |||  | || ||||| ||| | || || |||||||| |||||||| |||||||||
Sbjct: 1304 attgctgttgttcgacatggcgatagaactcccaagcagaaagtgaaactaaaagttaca 1363

                                                                        
Query: 370  gaggaaaaacttctaaatttgatgttgaagtacaatggtggaaagccaagagctgagaca 429
            |||||||||||  ||||  | |||||||||||||||||||||||||||||||||||||| 
Sbjct: 1364 gaggaaaaactattaaacctaatgttgaagtacaatggtggaaagccaagagctgagacc 1423

                          
Query: 430  aaactgaaaagtgc 443
            ||||| || |||||
Sbjct: 1424 aaacttaagagtgc 1437



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 511  agtgatagtgatgctgaagatttggagcatattgaaaagcttcggcaagtcaaagcagt 569
            |||||||||||||| |||||  | || |||  ||| |||||||||||||| ||||||||
Sbjct: 1505 agtgatagtgatgcagaagaccttgaacatgctgagaagcttcggcaagttaaagcagt 1563



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>ref|NM_001035537.1| Arabidopsis thaliana acid phosphatase AT3G01310 transcript variant
            AT3G01310.2 mRNA, complete cds
          Length = 3352

 Score =  170 bits (86), Expect = 3e-39
 Identities = 302/374 (80%)
 Strand = Plus / Plus

                                                                        
Query: 70   tcatatgtttgtgatgttaatggatggagcttcgtaaaaaactcttacaagtattatgac 129
            ||||||||||||||||| ||||||||||| || || || ||||| |||||||||||||||
Sbjct: 1061 tcatatgtttgtgatgtcaatggatggagttttgtgaagaactcatacaagtattatgac 1120

                                                                        
Query: 130  gatgctgcatgcatcatgcgaaaaatatttcttgatgcaaaagctcctcatctttcatca 189
            |||||||| ||  |  |  | ||||| | | | |||||||||||||||||||| ||||| 
Sbjct: 1121 gatgctgcgtgtgtgctaaggaaaatgtgtttggatgcaaaagctcctcatctctcatcc 1180

                                                                        
Query: 190  accattcctccaacccttccttggaaatctaaagcaccagatcagtctactgaaggcctt 249
            ||  ||||||| ||| | || |||||    || | ||| |  || |||| |||||| || 
Sbjct: 1181 actcttcctcccaccttgccatggaaggtcaatgaacctgtacaatctaatgaaggtcta 1240

                                                                        
Query: 250  acacgacaaggaagtgggattattggtacattcggtcagtcagaagaactacgctgcgtc 309
            || || || |||||||| || || || || || || ||||||||||| ||||| || |||
Sbjct: 1241 actcgccagggaagtggcatcatcggcacttttgggcagtcagaagagctacgttgtgtc 1300

                                                                        
Query: 310  attgttgtgatacgccatggtgatcggacaccaaagcagaaggtgaaactgaaagttaca 369
            |||| |||  | || ||||| ||| | || || |||||||| |||||||| |||||||||
Sbjct: 1301 attgctgttgttcgacatggcgatagaactcccaagcagaaagtgaaactaaaagttaca 1360

                                                                        
Query: 370  gaggaaaaacttctaaatttgatgttgaagtacaatggtggaaagccaagagctgagaca 429
            |||||||||||  ||||  | |||||||||||||||||||||||||||||||||||||| 
Sbjct: 1361 gaggaaaaactattaaacctaatgttgaagtacaatggtggaaagccaagagctgagacc 1420

                          
Query: 430  aaactgaaaagtgc 443
            ||||| || |||||
Sbjct: 1421 aaacttaagagtgc 1434



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 511  agtgatagtgatgctgaagatttggagcatattgaaaagcttcggcaagtcaaagcagt 569
            |||||||||||||| |||||  | || |||  ||| |||||||||||||| ||||||||
Sbjct: 1502 agtgatagtgatgcagaagaccttgaacatgctgagaagcttcggcaagttaaagcagt 1560



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>gb|AC010676.6|ATAC010676 Arabidopsis thaliana chromosome III BAC T22N4 genomic sequence,
             complete sequence
          Length = 58448

 Score =  111 bits (56), Expect = 3e-21
 Identities = 77/84 (91%)
 Strand = Plus / Plus

                                                                         
Query: 343   aagcagaaggtgaaactgaaagttacagaggaaaaacttctaaatttgatgttgaagtac 402
             |||||||| |||||||| ||||||||||||||||||||  ||||  | ||||||||||||
Sbjct: 40296 aagcagaaagtgaaactaaaagttacagaggaaaaactattaaacctaatgttgaagtac 40355

                                     
Query: 403   aatggtggaaagccaagagctgag 426
             ||||||||||||||||||||||||
Sbjct: 40356 aatggtggaaagccaagagctgag 40379



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 70    tcatatgtttgtgatgttaatggatggagcttcgtaaaaaactcttacaagta 122
             ||||||||||||||||| ||||||||||| || || || ||||| ||||||||
Sbjct: 39757 tcatatgtttgtgatgtcaatggatggagttttgtgaagaactcatacaagta 39809



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                        
Query: 511   agtgatagtgatgctgaagatttggagcatattgaaaagcttcggcaagtcaaagcagt 569
             |||||||||||||| |||||  | || |||  ||| |||||||||||||| ||||||||
Sbjct: 40728 agtgatagtgatgcagaagaccttgaacatgctgagaagcttcggcaagttaaagcagt 40786



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 163   gatgcaaaagctcctcatctttcatc 188
             |||||||||||||||||||| |||||
Sbjct: 40025 gatgcaaaagctcctcatctctcatc 40050



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>gb|AC010870.6|ATAC010870 Arabidopsis thaliana chromosome III BAC T13O15 genomic sequence,
            complete sequence
          Length = 86324

 Score =  111 bits (56), Expect = 3e-21
 Identities = 77/84 (91%)
 Strand = Plus / Minus

                                                                        
Query: 343  aagcagaaggtgaaactgaaagttacagaggaaaaacttctaaatttgatgttgaagtac 402
            |||||||| |||||||| ||||||||||||||||||||  ||||  | ||||||||||||
Sbjct: 1357 aagcagaaagtgaaactaaaagttacagaggaaaaactattaaacctaatgttgaagtac 1298

                                    
Query: 403  aatggtggaaagccaagagctgag 426
            ||||||||||||||||||||||||
Sbjct: 1297 aatggtggaaagccaagagctgag 1274



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 70   tcatatgtttgtgatgttaatggatggagcttcgtaaaaaactcttacaagta 122
            ||||||||||||||||| ||||||||||| || || || ||||| ||||||||
Sbjct: 1896 tcatatgtttgtgatgtcaatggatggagttttgtgaagaactcatacaagta 1844



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 511 agtgatagtgatgctgaagatttggagcatattgaaaagcttcggcaagtcaaagcagt 569
           |||||||||||||| |||||  | || |||  ||| |||||||||||||| ||||||||
Sbjct: 925 agtgatagtgatgcagaagaccttgaacatgctgagaagcttcggcaagttaaagcagt 867



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 163  gatgcaaaagctcctcatctttcatc 188
            |||||||||||||||||||| |||||
Sbjct: 1628 gatgcaaaagctcctcatctctcatc 1603



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>emb|AL391146.1|ATF2G14 Arabidopsis thaliana DNA chromosome 5, BAC clone F2G14 (ESSA project)
          Length = 85992

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 75/84 (89%)
 Strand = Plus / Plus

                                                                         
Query: 343   aagcagaaggtgaaactgaaagttacagaggaaaaacttctaaatttgatgttgaagtac 402
             |||||||| |||||||| |||||||||||||| |||||  ||||  ||||||||||||||
Sbjct: 65523 aagcagaaagtgaaactaaaagttacagaggagaaactgttaaacctgatgttgaagtac 65582

                                     
Query: 403   aatggtggaaagccaagagctgag 426
             ||||| ||||| ||||||||||||
Sbjct: 65583 aatggaggaaaaccaagagctgag 65606



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                         
Query: 33    ggtttgtggttttgatctcttaaggtgtgacggaagatcatatgtttgtgatgttaatgg 92
             |||||| |||||||||||| || | | ||| ||||| |||||||||||||| || |||||
Sbjct: 64783 ggtttgcggttttgatctcctacgatctgagggaagttcatatgtttgtgacgtaaatgg 64842

                   
Query: 93    atggag 98
             ||||||
Sbjct: 64843 atggag 64848



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 120/151 (79%)
 Strand = Plus / Plus

                                                                         
Query: 163   gatgcaaaagctcctcatctttcatcaaccattcctccaacccttccttggaaatctaaa 222
             |||||||| |||||||||||||| ||||| |||||||| |  || || ||||||   || 
Sbjct: 65257 gatgcaaaggctcctcatctttcttcaacaattcctcccattctgccatggaaaatcaac 65316

                                                                         
Query: 223   gcaccagatcagtctactgaaggccttacacgacaaggaagtgggattattggtacattc 282
             | ||| |  || |||| |||||| ||||| || ||||||||||| || || || || || 
Sbjct: 65317 gaacctgtccaatctaatgaaggtcttacccgccaaggaagtggcatcatcggaactttt 65376

                                            
Query: 283   ggtcagtcagaagaactacgctgcgtcattg 313
             || |||||||| || |||||||| |||||||
Sbjct: 65377 gggcagtcagaggagctacgctgtgtcattg 65407



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>gb|AC151524.2| Medicago truncatula chromosome 7 BAC clone mth2-67a20, complete
             sequence
          Length = 99692

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                         
Query: 33    ggtttgtggttttgatctcttaaggtgtgacggaagatcatatgtttgtgatgttaatgg 92
             ||||||||| ||||||||||| || ||||| ||| | || |||||||||||||| |||||
Sbjct: 57252 ggtttgtgggtttgatctcttgagatgtgagggacgctcctatgtttgtgatgtgaatgg 57193

                               
Query: 93    atggagcttcgtaaaaaa 110
             |||||||||||| |||||
Sbjct: 57192 atggagcttcgtgaaaaa 57175



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>dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT40C04, TM0199,
             complete sequence
          Length = 123325

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 73    tatgtttgtgatgttaatggatggagcttcgtaaaaaactcttacaagta 122
             |||||||||||||| ||||| |||||||| || ||||| ||| |||||||
Sbjct: 45037 tatgtttgtgatgtgaatgggtggagctttgtcaaaaattctcacaagta 45086



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 68/83 (81%)
 Strand = Plus / Plus

                                                                         
Query: 121   tattatgacgatgctgcatgcatcatgcgaaaaatatttcttgatgcaaaagctcctcat 180
             |||||||| |||||||| ||  |  |||| ||||| ||| | ||||||||||| ||||||
Sbjct: 45960 tattatgatgatgctgcctgtgtgctgcggaaaatgtttttagatgcaaaagcacctcat 46019

                                    
Query: 181   ctttcatcaaccattcctccaac 203
             ||||| ||| | ||||| |||||
Sbjct: 46020 ctttcttcagcaattccaccaac 46042



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                         
Query: 346   cagaaggtgaaactgaaagttacagaggaaaaacttctaaatttgatgttgaagtacaat 405
             ||||||||||| || |||||||| |||||||| || || ||  | |||||||| ||||||
Sbjct: 46270 cagaaggtgaagctaaaagttactgaggaaaagctgctgaacctaatgttgaaatacaat 46329

               
Query: 406   gg 407
             ||
Sbjct: 46330 gg 46331



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 543   tgaaaagcttcggcaagtcaaagc 566
             |||||||||||| |||||||||||
Sbjct: 47731 tgaaaagcttcgtcaagtcaaagc 47754



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>ref|NM_191480.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3273

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                       
Query: 130 gatgctgcatgcatcatgcgaaaaatatttcttgatgcaaaagctcctcatctttcatca 189
           ||||||||||||||  || | ||||| ||||| ||||  |||||||| ||| ||||||| 
Sbjct: 919 gatgctgcatgcattctgaggaaaatgtttctcgatgataaagctccacatatttcatcc 978

                    
Query: 190 accattcct 198
           |||||||||
Sbjct: 979 accattcct 987



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                            
Query: 130      gatgctgcatgcatcatgcgaaaaatatttcttgatgcaaaagctcctcatctttcatca 189
                ||||||||||||||  || | ||||| ||||| ||||  |||||||| ||| ||||||| 
Sbjct: 32911219 gatgctgcatgcattctgaggaaaatgtttctcgatgataaagctccacatatttcatcc 32911160

                         
Query: 190      accattcct 198
                |||||||||
Sbjct: 32911159 accattcct 32911151



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>dbj|AP003344.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0413G02
          Length = 155633

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                          
Query: 130    gatgctgcatgcatcatgcgaaaaatatttcttgatgcaaaagctcctcatctttcatca 189
              ||||||||||||||  || | ||||| ||||| ||||  |||||||| ||| ||||||| 
Sbjct: 132624 gatgctgcatgcattctgaggaaaatgtttctcgatgataaagctccacatatttcatcc 132565

                       
Query: 190    accattcct 198
              |||||||||
Sbjct: 132564 accattcct 132556



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>gb|U88173.1| Caenorhabditis elegans cosmid F46F11, complete sequence
          Length = 36532

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 64    ggaagatcatatgtttgtgatgttaatggat 94
             |||| |||||||||||||||||| |||||||
Sbjct: 29051 ggaaaatcatatgtttgtgatgtcaatggat 29081



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>ref|NM_170868.2| Caenorhabditis elegans F46F11.1a (F46F11.1) mRNA, complete cds
          Length = 4027

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 64  ggaagatcatatgtttgtgatgttaatggat 94
           |||| |||||||||||||||||| |||||||
Sbjct: 875 ggaaaatcatatgtttgtgatgtcaatggat 905



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>ref|NM_171837.3| Caenorhabditis elegans F46F11.1b (F46F11.1) mRNA, complete cds
          Length = 3806

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 64  ggaagatcatatgtttgtgatgttaatggat 94
           |||| |||||||||||||||||| |||||||
Sbjct: 875 ggaaaatcatatgtttgtgatgtcaatggat 905



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>emb|AL663121.1| Human DNA sequence from clone RP11-421P17 on chromosome 1, complete
             sequence
          Length = 20050

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 369   agaggaaaaacttctaaatttg 390
             ||||||||||||||||||||||
Sbjct: 16728 agaggaaaaacttctaaatttg 16707



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>emb|CR925754.15| Zebrafish DNA sequence from clone CH211-148J16 in linkage group 6,
              complete sequence
          Length = 150312

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 374    aaaaacttctaaatttgatgtt 395
              ||||||||||||||||||||||
Sbjct: 128189 aaaaacttctaaatttgatgtt 128210



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>emb|AL158058.5|CNS01RGJ Human chromosome 14 DNA sequence BAC R-260G13 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 180372

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 370    gaggaaaaacttctaaatttgatgttgaag 399
              |||||||||| ||||| |||||||||||||
Sbjct: 147652 gaggaaaaacatctaattttgatgttgaag 147623



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>emb|AL135858.3|CNS01DVJ Human chromosome 14 DNA sequence BAC R-667E4 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 164628

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 370    gaggaaaaacttctaaatttgatgttgaag 399
              |||||||||| ||||| |||||||||||||
Sbjct: 141410 gaggaaaaacatctaattttgatgttgaag 141439



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>gb|AC141898.3| Mus musculus BAC clone RP23-155I18 from chromosome 5, complete sequence
          Length = 232201

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 494    ctaggtcaggtcaggagagtg 514
              |||||||||||||||||||||
Sbjct: 146038 ctaggtcaggtcaggagagtg 146018



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>gb|AC164080.7| Mus musculus chromosome 1, clone RP23-212E14, complete sequence
          Length = 205823

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 541 attgaaaagcttcggcaagtcaaag 565
           ||||||||||||| |||||||||||
Sbjct: 432 attgaaaagcttctgcaagtcaaag 408



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>gb|AC115940.11| Mus musculus chromosome 5, clone RP24-553D12, complete sequence
          Length = 189685

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 494    ctaggtcaggtcaggagagtg 514
              |||||||||||||||||||||
Sbjct: 162064 ctaggtcaggtcaggagagtg 162084



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>ref|XM_786714.1| PREDICTED: Strongylocentrotus purpuratus similar to CG14616-PD,
            isoform D (LOC586959), partial mRNA
          Length = 2349

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                        
Query: 64   ggaagatcatatgtttgtgatgttaatggatggagcttcgtaaaaaactcttacaagtat 123
            |||||||| ||||| |||||||| |||||||  ||||| || || |||||  | ||||||
Sbjct: 994  ggaagatcctatgtgtgtgatgtcaatggattcagctttgtcaagaactcaaataagtat 1053

                 
Query: 124  tatga 128
            |||||
Sbjct: 1054 tatga 1058



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>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 384     aaatttgatgttgaagtacaa 404
               |||||||||||||||||||||
Sbjct: 1601697 aaatttgatgttgaagtacaa 1601677



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>gb|AC105162.11| Mus musculus chromosome 1, clone RP24-92O11, complete sequence
          Length = 177420

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 541   attgaaaagcttcggcaagtcaaag 565
             ||||||||||||| |||||||||||
Sbjct: 76850 attgaaaagcttctgcaagtcaaag 76874



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>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome
          Length = 2878529

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 384     aaatttgatgttgaagtacaa 404
               |||||||||||||||||||||
Sbjct: 1652807 aaatttgatgttgaagtacaa 1652787



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>gb|AC112223.2| Homo sapiens chromosome 3 clone RP11-237P23, complete sequence
          Length = 166745

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 422    ctgagacaaaactgaaaagtg 442
              |||||||||||||||||||||
Sbjct: 165864 ctgagacaaaactgaaaagtg 165844



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>gb|AC092054.2| Homo sapiens chromosome 3 clone RP11-437I21, complete sequence
          Length = 165894

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 422   ctgagacaaaactgaaaagtg 442
             |||||||||||||||||||||
Sbjct: 89821 ctgagacaaaactgaaaagtg 89841



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>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome
          Length = 2809422

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 384     aaatttgatgttgaagtacaa 404
               |||||||||||||||||||||
Sbjct: 1629473 aaatttgatgttgaagtacaa 1629453



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>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome
          Length = 2821361

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 384     aaatttgatgttgaagtacaa 404
               |||||||||||||||||||||
Sbjct: 1555512 aaatttgatgttgaagtacaa 1555492



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>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome
          Length = 2872769

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 384     aaatttgatgttgaagtacaa 404
               |||||||||||||||||||||
Sbjct: 1652309 aaatttgatgttgaagtacaa 1652289



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>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2
          Length = 2820462

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 384     aaatttgatgttgaagtacaa 404
               |||||||||||||||||||||
Sbjct: 1621942 aaatttgatgttgaagtacaa 1621922



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>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome
          Length = 2814816

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 384     aaatttgatgttgaagtacaa 404
               |||||||||||||||||||||
Sbjct: 1576395 aaatttgatgttgaagtacaa 1576375



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>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome
          Length = 2902619

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 384     aaatttgatgttgaagtacaa 404
               |||||||||||||||||||||
Sbjct: 1687163 aaatttgatgttgaagtacaa 1687143



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>gb|AC102377.14| Mus musculus chromosome 18, clone RP23-416I22, complete sequence
          Length = 188005

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 354    gaaactgaaagttacagagga 374
              |||||||||||||||||||||
Sbjct: 126335 gaaactgaaagttacagagga 126315



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>gb|AC005304.1|AC005304 Homo sapiens chromosome 17, clone hRPK.131_K_5, complete sequence
          Length = 164017

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 428    caaaactgaaaagtgcagtac 448
              |||||||||||||||||||||
Sbjct: 160743 caaaactgaaaagtgcagtac 160723



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>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome
          Length = 2742531

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 384     aaatttgatgttgaagtacaa 404
               |||||||||||||||||||||
Sbjct: 1531574 aaatttgatgttgaagtacaa 1531554



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>gb|U09185.1|BAU09185 Buchnera aphidicola Soh B protease (soh B) gene, partial cds,
            phosphoribosyl anthranilate transferase (trpD),
            phosphoribosyl anthranilate isomerase/indoleglycerol
            phosphate synthase fusion protein (trpC/F), tryptophan
            synthase beta subunit (trpB), and tryptophan synthase
            alpha subunit (trpA) genes, complete cds
          Length = 7152

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  tgcatgcatcatgcgaaaaat 155
            |||||||||||||||||||||
Sbjct: 2777 tgcatgcatcatgcgaaaaat 2797



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>ref|XM_633341.1| Dictyostelium discoideum hypothetical protein (DDB0186099), partial
           mRNA
          Length = 1455

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 73  tatgtttgtgatgttaatggatgg 96
           |||||||||||||| |||||||||
Sbjct: 841 tatgtttgtgatgtaaatggatgg 864



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>gb|BT013448.1| Lycopersicon esculentum clone 132103F, mRNA sequence
          Length = 3113

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 347 agaaggtgaaactgaaagttacag 370
           ||||||||||| ||||||||||||
Sbjct: 261 agaaggtgaaaatgaaagttacag 284



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>gb|AC123751.6| Mus musculus chromosome 8, clone RP24-187F1, complete sequence
          Length = 159523

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   aacccttccttggaaatcta 220
             ||||||||||||||||||||
Sbjct: 11952 aacccttccttggaaatcta 11933



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>gb|AC101882.14| Mus musculus chromosome 10, clone RP23-394M6, complete sequence
          Length = 209838

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   tcagtctactgaaggcctta 250
             ||||||||||||||||||||
Sbjct: 82844 tcagtctactgaaggcctta 82863



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>emb|BX470169.7| Zebrafish DNA sequence from clone DKEY-31P8 in linkage group 7, complete
              sequence
          Length = 222405

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 325    catggtgatcggacaccaaagcagaaggtgaa 356
              ||||| ||||| ||||||||||||||| ||||
Sbjct: 118616 catggagatcgcacaccaaagcagaagatgaa 118585



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>emb|BX908814.1| Tetraodon nigroviridis
          Length = 120100

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   aaagcagaaggtgaaactga 361
             ||||||||||||||||||||
Sbjct: 34664 aaagcagaaggtgaaactga 34683



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   aaagcagaaggtgaaactga 361
             ||||||||||||||||||||
Sbjct: 19416 aaagcagaaggtgaaactga 19435



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>gb|AC163649.3| Mus musculus BAC clone RP24-372B10 from chromosome 3, complete sequence
          Length = 154740

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 368   cagaggaaaaacttctaaatttga 391
             |||| |||||||||||||||||||
Sbjct: 47831 cagatgaaaaacttctaaatttga 47854



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>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence
          Length = 1877212

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 476    gacaacttgtgccaccaact 495
              ||||||||||||||||||||
Sbjct: 585892 gacaacttgtgccaccaact 585873



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>dbj|AB230013.1| Aspergillus oryzae cDNA, contig sequence: AoEST6900
          Length = 565

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 81  tgatgttaatggatggagcttcgt 104
           |||||||||||| |||||||||||
Sbjct: 256 tgatgttaatggctggagcttcgt 279



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>dbj|AP007165.1| Aspergillus oryzae RIB40 genomic DNA, SC124
          Length = 249334

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 81     tgatgttaatggatggagcttcgt 104
              |||||||||||| |||||||||||
Sbjct: 240168 tgatgttaatggctggagcttcgt 240145



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>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 382     ctaaatttgatgttgaagta 401
               ||||||||||||||||||||
Sbjct: 1409133 ctaaatttgatgttgaagta 1409152



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>gb|AC092804.2| Homo sapiens chromosome 1 clone RP11-81E23, complete sequence
          Length = 161398

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    aaaactcttacaagtattat 126
              ||||||||||||||||||||
Sbjct: 107725 aaaactcttacaagtattat 107706



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>ref|XM_679626.1| PREDICTED: Danio rerio similar to CG14616-PD, isoform D (LOC556748),
            mRNA
          Length = 2454

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 325  catggtgatcggacaccaaagcagaaggtgaa 356
            ||||| ||||| ||||||||||||||| ||||
Sbjct: 1201 catggagatcgcacaccaaagcagaagatgaa 1232



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>gb|AC116801.9| Mus musculus chromosome 8, clone RP24-337F7, complete sequence
          Length = 168297

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 201  aacccttccttggaaatcta 220
            ||||||||||||||||||||
Sbjct: 4339 aacccttccttggaaatcta 4358



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>gb|AF247193.1|AF247193S1 Mus musculus endobrevin (Vamp8) gene, exon 1
          Length = 4869

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 354  gaaactgaaagttacagaggaaaa 377
            ||||||||||||| ||||||||||
Sbjct: 3649 gaaactgaaagttccagaggaaaa 3672



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 73      tatgtttgtgatgttaatgg 92
               ||||||||||||||||||||
Sbjct: 5013045 tatgtttgtgatgttaatgg 5013026



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 564      agcagtactggaggagggtg 583
                ||||||||||||||||||||
Sbjct: 21408075 agcagtactggaggagggtg 21408094



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>gb|AC106858.12| Homo sapiens chromosome 17, clone RP11-347L15, complete sequence
          Length = 160484

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 410   gaaagccaagagctgagaca 429
             ||||||||||||||||||||
Sbjct: 88130 gaaagccaagagctgagaca 88149



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>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome
          Length = 1738505

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 363    agttacagaggaaaaacttctaaa 386
              ||||||||||| ||||||||||||
Sbjct: 211818 agttacagaggtaaaacttctaaa 211841



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>dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0020C11
          Length = 163328

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 564  agcagtactggaggagggtg 583
            ||||||||||||||||||||
Sbjct: 3002 agcagtactggaggagggtg 3021



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>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1712_E04
          Length = 110098

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 564   agcagtactggaggagggtg 583
             ||||||||||||||||||||
Sbjct: 68028 agcagtactggaggagggtg 68047



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>emb|AL928670.6| Zebrafish DNA sequence from clone CH211-258F15, complete sequence
          Length = 167613

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 325    catggtgatcggacaccaaagcagaaggtgaa 356
              ||||| ||||| ||||||||||||||| ||||
Sbjct: 160623 catggagatcgcacaccaaagcagaagatgaa 160654



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>dbj|AK071816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114O15, full
            insert sequence
          Length = 1921

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 73   tatgtttgtgatgttaatgg 92
            ||||||||||||||||||||
Sbjct: 1675 tatgtttgtgatgttaatgg 1694



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>ref|NM_001012299.1| Sus scrofa secretogranin II (SCG2), mRNA
          Length = 2395

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 531 tttggagcatattgaaaagcttcggcaa 558
           ||||||| |||| |||||||||||||||
Sbjct: 287 tttggagtatatagaaaagcttcggcaa 314



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>gb|AC116115.11| Mus musculus chromosome 6, clone RP23-60P18, complete sequence
          Length = 215571

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 354    gaaactgaaagttacagaggaaaa 377
              ||||||||||||| ||||||||||
Sbjct: 158732 gaaactgaaagttccagaggaaaa 158709



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>gb|AC153617.3| Mus musculus 6 BAC RP23-177G20 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 199525

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 149    gaaaaatatttcttgatgca 168
              ||||||||||||||||||||
Sbjct: 123701 gaaaaatatttcttgatgca 123682



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 73      tatgtttgtgatgttaatgg 92
               ||||||||||||||||||||
Sbjct: 5013027 tatgtttgtgatgttaatgg 5013008



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>emb|AL831811.5|CNS08CAO Oryza sativa chromosome 12, . BAC OJ1561_A05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 91053

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    tatgtttgtgatgttaatgg 92
             ||||||||||||||||||||
Sbjct: 56419 tatgtttgtgatgttaatgg 56400



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>gb|AY870646.1| Sus scrofa secretogranin II mRNA, complete cds
          Length = 2395

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 531 tttggagcatattgaaaagcttcggcaa 558
           ||||||| |||| |||||||||||||||
Sbjct: 287 tttggagtatatagaaaagcttcggcaa 314



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>gb|AC124344.6| Mus musculus BAC clone RP24-448A7 from 3, complete sequence
          Length = 219818

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 368    cagaggaaaaacttctaaatttga 391
              |||| |||||||||||||||||||
Sbjct: 158234 cagatgaaaaacttctaaatttga 158257



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>gb|AC171203.1| Mus musculus BAC clone RP24-260O23 from chromosome 9, complete sequence
          Length = 171374

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 357    actgaaagttacagaggaaaaact 380
              ||||||| ||||||||||||||||
Sbjct: 128520 actgaaacttacagaggaaaaact 128543



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>emb|AL772288.12| Mouse DNA sequence from clone RP23-360H6 on chromosome 4, complete
             sequence
          Length = 132015

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   acaaggaagtgggattattg 274
             ||||||||||||||||||||
Sbjct: 42320 acaaggaagtgggattattg 42301



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>emb|AL808102.8| Mouse DNA sequence from clone RP23-192O6 on chromosome 2, complete
              sequence
          Length = 178743

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 367    acagaggaaaaacttctaaa 386
              ||||||||||||||||||||
Sbjct: 161868 acagaggaaaaacttctaaa 161849



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>gb|L04278.1|XELSTAGE Xenopus laevis mRNA sequence
          Length = 3522

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 449 aattacaagacttgctagatgcaa 472
           |||| |||||||||||||||||||
Sbjct: 230 aattccaagacttgctagatgcaa 253


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,143,089
Number of Sequences: 3902068
Number of extensions: 6143089
Number of successful extensions: 123878
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 123205
Number of HSP's gapped (non-prelim): 663
length of query: 583
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 560
effective length of database: 17,143,297,704
effective search space: 9600246714240
effective search space used: 9600246714240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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