ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd27l05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X77569.1|ZMCNXRNA Z.mays CNX mRNA 226 2e-56
2ref|XM_472371.1| Oryza sativa (japonica cultivar-group), predic... 202 4e-49
3emb|AL606610.3|OSJN00045 Oryza sativa genomic DNA, chromosome 4,... 202 4e-49
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 202 4e-49
5dbj|AK069118.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 4e-49
6dbj|AK061185.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 4e-49
7gb|AY112482.1| Zea mays CL2224_1 mRNA sequence 178 5e-42
8dbj|AP004932.1| Lotus japonicus genomic DNA, chromosome 1, clone... 103 2e-19
9dbj|AB196933.1| Glycine max Gm cnx-1 mRNA for calnexin, complete... 100 4e-18
10gb|U20502.1|GMU20502 Glycine max calnexin mRNA, complete cds 100 4e-18
11gb|AC139708.15| Medicago truncatula clone mth2-9f16, complete se... 78 1e-11
12emb|Y17329.1|PSA17329 Pisum sativum mRNA for calnexin 78 1e-11
13gb|AC141864.7| Medicago truncatula clone mth2-21o24, complete se... 76 6e-11
14gb|AY350714.1| Olimarabidopsis pumila clone BAC Op37I22, complet... 66 5e-08
15gb|DQ160064.1| Taraxacum officinale TO49-2 (To49-2) mRNA, partia... 64 2e-07
16ref|NM_125573.2| Arabidopsis thaliana calcium ion binding AT5G61... 56 5e-05
17gb|AY050777.1| Arabidopsis thaliana At5g61790 mRNA sequence 56 5e-05
18emb|Z18242.1|ATCALHOM Arabidopsis thaliana calnexin homolog 56 5e-05
19gb|AY114669.1| Arabidopsis thaliana calnexin-like protein precur... 56 5e-05
20gb|AY065007.1| Arabidopsis thaliana AT5g61790/mac9_90 mRNA sequence 56 5e-05
21gb|AY059880.1| Arabidopsis thaliana calnexin homolog precursor (... 56 5e-05
22gb|AY086864.1| Arabidopsis thaliana clone 2869 mRNA, complete se... 56 5e-05
23dbj|AB010069.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 56 5e-05
24gb|BT013681.1| Lycopersicon esculentum clone 132503F, mRNA sequence 54 2e-04
25emb|Z35108.1|HTCALNEX H.tuberosus mRNA for calnexin 54 2e-04
26dbj|AB218598.1| Lycopersicon esculentum LeCNX61.0 mRNA for calne... 54 2e-04
27ref|NM_120816.2| Arabidopsis thaliana calcium ion binding AT5G07... 46 0.049
28gb|BT010385.1| Arabidopsis thaliana At5g07340 mRNA, complete cds 46 0.049
29gb|BT001999.1| Arabidopsis thaliana calnexin homolog (At5g07340)... 46 0.049
30emb|AL163912.1|ATT2I1 Arabidopsis thaliana DNA chromosome 5, BAC... 46 0.049
31gb|U08315.1|ATU08315 Arabidopsis thaliana Columbia calnexin homo... 46 0.049
32gb|AC159411.1| Trypanosoma brucei chromosome 3 clone RPCI93-1J15... 44 0.19
33gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence 44 0.19
34gb|AC145376.3| Pan troglodytes BAC clone RP43-59A12 from 7, comp... 44 0.19
35ref|XM_818675.1| Trypanosoma brucei TREU927 clone RPCI93-1J15 AT... 44 0.19
36ref|XM_380667.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 44 0.19
37gb|AC142305.1| Pan troglodytes BAC clone RP43-130P22 from 7, com... 44 0.19
38gb|AY007706.1| Trypanosoma brucei brucei ATPase beta subunit mRN... 44 0.19
39gb|AC009401.3|AC009401 Homo sapiens PAC clone RP4-603O16 from 7q... 44 0.19
40gb|AC078842.2|AC078842 Homo sapiens chromosome 7 clone RP11-102G... 44 0.19
41gb|AC160118.2| Mus musculus BAC clone RP23-440L7 from chromosome... 42 0.77
42gb|AC114674.10| Mus musculus chromosome 9, clone RP24-209N21, co... 42 0.77
43gb|AC164091.3| Mus musculus BAC clone RP23-97M20 from chromosome... 42 0.77
44gb|AC092532.17| Papio anubis clone rp41-110d13, complete sequence 42 0.77
45gb|AC006549.28| Homo sapiens chromosome 22 clone p215k21 map 22q... 42 0.77
46gb|AC058790.14| Homo sapiens chromosome 22 clone b518b9 map 22q1... 42 0.77
47gb|AC007663.29| Homo sapiens chromosome 22 clone b444p24 map 22q... 42 0.77
48gb|AC169088.2| Gallus gallus BAC clone CH261-100B3 from chromoso... 42 0.77
49emb|AL645545.8| Mouse DNA sequence from clone RP23-203J4 on chro... 42 0.77
50ref|XM_363681.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 3.0
51gb|AC079216.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 3.0
52ref|XM_749569.1| Aspergillus fumigatus Af293 hypothetical protei... 40 3.0
53emb|AL109731.1|SPBC19C2 S.pombe chromosome II cosmid c19C2 40 3.0
54emb|BX890584.6| Mouse DNA sequence from clone RP23-160I11 on chr... 40 3.0
55gb|AC010133.4|AC010133 Homo sapiens clone RP11-118E9, complete s... 40 3.0
56ref|NM_001004922.1| Xenopus tropicalis MGC89099 protein (MGC8909... 40 3.0
57gb|AC091902.2| Homo sapiens chromosome 5 clone RP11-16L24, compl... 40 3.0
58gb|AC139715.1| Homo sapiens BAC clone RP11-399D2 from 4, complet... 40 3.0
59gb|BC075379.1| Xenopus tropicalis MGC89099 protein, mRNA (cDNA c... 40 3.0
60emb|CR760333.2| Xenopus tropicalis finished cDNA, clone TNeu050b22 40 3.0
61emb|BX088567.6| Mouse DNA sequence from clone RP23-21L20 on chro... 40 3.0
62gb|AC134897.4| Mus musculus BAC clone RP23-459D9 from 6, complet... 40 3.0 
>emb|X77569.1|ZMCNXRNA Z.mays CNX mRNA
          Length = 1559

 Score =  226 bits (114), Expect = 2e-56
 Identities = 183/206 (88%)
 Strand = Plus / Plus

                                                                       
Query: 3   cccaaccctgaatactttgagcttgacaagcctgactttgatccgattgctgctactgga 62
           ||||||||||| |||||||||||||||| |||||| |||||||| |||||||||| ||| 
Sbjct: 716 cccaaccctgagtactttgagcttgacaggcctgattttgatccaattgctgctattggg 775

                                                                       
Query: 63  attgagatctggacaatgcaggatggcatcctttttgacaacattctaattgctgatgat 122
           |||||||||||||||||||||||||||||||| || ||||| ||  | ||||||||||||
Sbjct: 776 attgagatctggacaatgcaggatggcatcctgttcgacaatatcttgattgctgatgat 835

                                                                       
Query: 123 gagaaggtagccatgtctatcttggagaagacatggaagcctaagtttgttgttgagaag 182
           ||||| || ||||  || ||  ||||||||||||||||||| |||| || ||||||||||
Sbjct: 836 gagaaagttgccacctccattctggagaagacatggaagcccaagtatgatgttgagaag 895

                                     
Query: 183 gaaaagcagaaggctgaggaggctgc 208
           |||||| |||||||||||||||||||
Sbjct: 896 gaaaaggagaaggctgaggaggctgc 921
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>ref|XM_472371.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1614

 Score =  202 bits (102), Expect = 4e-49
 Identities = 183/210 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    ccccaaccctgaatactttgagcttgacaagcctgactttgatccgattgctgctactgg 61
            |||||||||||| ||||| ||||||||||||||||||| |||||||||||| |||| |||
Sbjct: 1035 ccccaaccctgagtacttcgagcttgacaagcctgactctgatccgattgccgctattgg 1094

                                                                        
Query: 62   aattgagatctggacaatgcaggatggcatcctttttgacaacattctaattgctgatga 121
             |||||||||||||| ||||| ||||||||||| |||||||||||| | || ||||||||
Sbjct: 1095 gattgagatctggacgatgcaagatggcatcctgtttgacaacattttgatcgctgatga 1154

                                                                        
Query: 122  tgagaaggtagccatgtctatcttggagaagacatggaagcctaagtttgttgttgagaa 181
            ||||||||| ||||  |||||| |||||||| | |||||||| ||||  |  || |||||
Sbjct: 1155 tgagaaggttgccacttctatcctggagaagtcttggaagcccaagtacgaagtagagaa 1214

                                          
Query: 182  ggaaaagcagaaggctgaggaggctgcagc 211
            ||| ||| |||||||||||||||| |||||
Sbjct: 1215 ggagaaggagaaggctgaggaggcagcagc 1244
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>emb|AL606610.3|OSJN00045 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E08,
             complete sequence
          Length = 106975

 Score =  202 bits (102), Expect = 4e-49
 Identities = 183/210 (87%)
 Strand = Plus / Minus

                                                                         
Query: 2     ccccaaccctgaatactttgagcttgacaagcctgactttgatccgattgctgctactgg 61
             |||||||||||| ||||| ||||||||||||||||||| |||||||||||| |||| |||
Sbjct: 77912 ccccaaccctgagtacttcgagcttgacaagcctgactctgatccgattgccgctattgg 77853

                                                                         
Query: 62    aattgagatctggacaatgcaggatggcatcctttttgacaacattctaattgctgatga 121
              |||||||||||||| ||||| ||||||||||| |||||||||||| | || ||||||||
Sbjct: 77852 gattgagatctggacgatgcaagatggcatcctgtttgacaacattttgatcgctgatga 77793

                                                                         
Query: 122   tgagaaggtagccatgtctatcttggagaagacatggaagcctaagtttgttgttgagaa 181
             ||||||||| ||||  |||||| |||||||| | |||||||| ||||  |  || |||||
Sbjct: 77792 tgagaaggttgccacttctatcctggagaagtcttggaagcccaagtacgaagtagagaa 77733

                                           
Query: 182   ggaaaagcagaaggctgaggaggctgcagc 211
             ||| ||| |||||||||||||||| |||||
Sbjct: 77732 ggagaaggagaaggctgaggaggcagcagc 77703
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  202 bits (102), Expect = 4e-49
 Identities = 183/210 (87%)
 Strand = Plus / Minus

                                                                            
Query: 2        ccccaaccctgaatactttgagcttgacaagcctgactttgatccgattgctgctactgg 61
                |||||||||||| ||||| ||||||||||||||||||| |||||||||||| |||| |||
Sbjct: 19923104 ccccaaccctgagtacttcgagcttgacaagcctgactctgatccgattgccgctattgg 19923045

                                                                            
Query: 62       aattgagatctggacaatgcaggatggcatcctttttgacaacattctaattgctgatga 121
                 |||||||||||||| ||||| ||||||||||| |||||||||||| | || ||||||||
Sbjct: 19923044 gattgagatctggacgatgcaagatggcatcctgtttgacaacattttgatcgctgatga 19922985

                                                                            
Query: 122      tgagaaggtagccatgtctatcttggagaagacatggaagcctaagtttgttgttgagaa 181
                ||||||||| ||||  |||||| |||||||| | |||||||| ||||  |  || |||||
Sbjct: 19922984 tgagaaggttgccacttctatcctggagaagtcttggaagcccaagtacgaagtagagaa 19922925

                                              
Query: 182      ggaaaagcagaaggctgaggaggctgcagc 211
                ||| ||| |||||||||||||||| |||||
Sbjct: 19922924 ggagaaggagaaggctgaggaggcagcagc 19922895
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>dbj|AK069118.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008D14, full
            insert sequence
          Length = 2059

 Score =  202 bits (102), Expect = 4e-49
 Identities = 183/210 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    ccccaaccctgaatactttgagcttgacaagcctgactttgatccgattgctgctactgg 61
            |||||||||||| ||||| ||||||||||||||||||| |||||||||||| |||| |||
Sbjct: 1141 ccccaaccctgagtacttcgagcttgacaagcctgactctgatccgattgccgctattgg 1200

                                                                        
Query: 62   aattgagatctggacaatgcaggatggcatcctttttgacaacattctaattgctgatga 121
             |||||||||||||| ||||| ||||||||||| |||||||||||| | || ||||||||
Sbjct: 1201 gattgagatctggacgatgcaagatggcatcctgtttgacaacattttgatcgctgatga 1260

                                                                        
Query: 122  tgagaaggtagccatgtctatcttggagaagacatggaagcctaagtttgttgttgagaa 181
            ||||||||| ||||  |||||| |||||||| | |||||||| ||||  |  || |||||
Sbjct: 1261 tgagaaggttgccacttctatcctggagaagtcttggaagcccaagtacgaagtagagaa 1320

                                          
Query: 182  ggaaaagcagaaggctgaggaggctgcagc 211
            ||| ||| |||||||||||||||| |||||
Sbjct: 1321 ggagaaggagaaggctgaggaggcagcagc 1350
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>dbj|AK061185.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-E03, full
           insert sequence
          Length = 945

 Score =  202 bits (102), Expect = 4e-49
 Identities = 183/210 (87%)
 Strand = Plus / Plus

                                                                       
Query: 2   ccccaaccctgaatactttgagcttgacaagcctgactttgatccgattgctgctactgg 61
           |||||||||||| ||||| ||||||||||||||||||| |||||||||||| |||| |||
Sbjct: 27  ccccaaccctgagtacttcgagcttgacaagcctgactctgatccgattgccgctattgg 86

                                                                       
Query: 62  aattgagatctggacaatgcaggatggcatcctttttgacaacattctaattgctgatga 121
            |||||||||||||| ||||| ||||||||||| |||||||||||| | || ||||||||
Sbjct: 87  gattgagatctggacgatgcaagatggcatcctgtttgacaacattttgatcgctgatga 146

                                                                       
Query: 122 tgagaaggtagccatgtctatcttggagaagacatggaagcctaagtttgttgttgagaa 181
           ||||||||| ||||  |||||| |||||||| | |||||||| ||||  |  || |||||
Sbjct: 147 tgagaaggttgccacttctatcctggagaagtcttggaagcccaagtacgaagtagagaa 206

                                         
Query: 182 ggaaaagcagaaggctgaggaggctgcagc 211
           ||| ||| |||||||||||||||| |||||
Sbjct: 207 ggagaaggagaaggctgaggaggcagcagc 236
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>gb|AY112482.1| Zea mays CL2224_1 mRNA sequence
          Length = 1661

 Score =  178 bits (90), Expect = 5e-42
 Identities = 147/166 (88%)
 Strand = Plus / Plus

                                                                       
Query: 3   cccaaccctgaatactttgagcttgacaagcctgactttgatccgattgctgctactgga 62
           ||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||| 
Sbjct: 716 cccaaccctgagtactttgagcttgacaagcctgactttgatccaattgctgctattggg 775

                                                                       
Query: 63  attgagatctggacaatgcaggatggcatcctttttgacaacattctaattgctgatgat 122
           |||||||||||||||||||||||||||||||| |||||||| ||  | |||||||| |||
Sbjct: 776 attgagatctggacaatgcaggatggcatcctgtttgacaatatcttgattgctgacgat 835

                                                         
Query: 123 gagaaggtagccatgtctatcttggagaagacatggaagcctaagt 168
           ||||| || ||||  || ||  |||||||||| |||||||| ||||
Sbjct: 836 gagaaagttgccacctccattctggagaagacctggaagcccaagt 881
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>dbj|AP004932.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT10J03, TM0094a,
             complete sequence
          Length = 65557

 Score =  103 bits (52), Expect = 2e-19
 Identities = 91/104 (87%)
 Strand = Plus / Plus

                                                                         
Query: 6     aaccctgaatactttgagcttgacaagcctgactttgatccgattgctgctactggaatt 65
             ||||||||||||||||| ||||| || ||||| ||||| || |||||||||| ||| |||
Sbjct: 13549 aaccctgaatactttgaacttgagaaacctgattttgagcctattgctgctattggcatt 13608

                                                         
Query: 66    gagatctggacaatgcaggatggcatcctttttgacaacattct 109
             ||||| ||||||||||| |||||||| || |||||||| |||||
Sbjct: 13609 gagatttggacaatgcaagatggcatactatttgacaatattct 13652
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>dbj|AB196933.1| Glycine max Gm cnx-1 mRNA for calnexin, complete cds
          Length = 1786

 Score = 99.6 bits (50), Expect = 4e-18
 Identities = 86/98 (87%)
 Strand = Plus / Plus

                                                                        
Query: 6    aaccctgaatactttgagcttgacaagcctgactttgatccgattgctgctactggaatt 65
            ||||||||||||||||| || |  || ||||| ||||| || |||||||||| ||| |||
Sbjct: 1171 aaccctgaatactttgaactcgcaaaacctgattttgagcctattgctgctattggcatt 1230

                                                  
Query: 66   gagatctggacaatgcaggatggcatcctttttgacaa 103
            ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 1231 gagatttggacaatgcaggatggcatcctatttgacaa 1268
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>gb|U20502.1|GMU20502 Glycine max calnexin mRNA, complete cds
          Length = 1919

 Score = 99.6 bits (50), Expect = 4e-18
 Identities = 86/98 (87%)
 Strand = Plus / Plus

                                                                        
Query: 6    aaccctgaatactttgagcttgacaagcctgactttgatccgattgctgctactggaatt 65
            ||||||||||||||||| || |  || ||||| ||||| || |||||||||| ||| |||
Sbjct: 1111 aaccctgaatactttgaactcgcaaaacctgattttgagcctattgctgctattggcatt 1170

                                                  
Query: 66   gagatctggacaatgcaggatggcatcctttttgacaa 103
            ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 1171 gagatttggacaatgcaggatggcatcctatttgacaa 1208
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>gb|AC139708.15| Medicago truncatula clone mth2-9f16, complete sequence
          Length = 117358

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                         
Query: 6     aaccctgaatactttgagcttgacaagcctgactttgatccgattgctgctactggaatt 65
             ||||| || |||||||| ||||| || ||||||||||| || |||||||||| ||| |||
Sbjct: 90778 aacccagagtactttgaacttgagaaacctgactttgagcctattgctgctattggtatt 90837

                                                
Query: 66    gagatctggacaatgcaggatggcatcctttttga 100
             || || |||||||||||||| ||||| || |||||
Sbjct: 90838 gaaatttggacaatgcaggacggcattctatttga 90872



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                
Query: 175   ttgagaaggaaaagcagaaggctgaggaggctgcagcagccgagtcagagg 225
             ||||||| || |||||||||||||| ||||  |||||||| ||||||||||
Sbjct: 90947 ttgagaaagagaagcagaaggctgaagaggaggcagcagctgagtcagagg 90997
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>emb|Y17329.1|PSA17329 Pisum sativum mRNA for calnexin
          Length = 1951

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                        
Query: 6    aaccctgaatactttgagcttgacaagcctgactttgatccgattgctgctactggaatt 65
            ||||| || |||||||| ||||| || || |||||||| || |||||||||| ||| |||
Sbjct: 1108 aacccagagtactttgaacttgagaaaccagactttgagcctattgctgctattggcatt 1167

                                               
Query: 66   gagatctggacaatgcaggatggcatcctttttga 100
            || || ||||||||||| ||||||||||| |||||
Sbjct: 1168 gaaatttggacaatgcaagatggcatcctatttga 1202
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>gb|AC141864.7| Medicago truncatula clone mth2-21o24, complete sequence
          Length = 106571

 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 74/86 (86%)
 Strand = Plus / Minus

                                                                         
Query: 6     aaccctgaatactttgagcttgacaagcctgactttgatccgattgctgctactggaatt 65
             |||||||| |||||||||||| | || || || ||||| || ||||| |||| ||| |||
Sbjct: 99978 aaccctgattactttgagcttaaaaaacccgattttgagcctattgcagctattggtatt 99919

                                       
Query: 66    gagatctggacaatgcaggatggcat 91
             ||||| ||||||||||||||||||||
Sbjct: 99918 gagatttggacaatgcaggatggcat 99893
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>gb|AY350714.1| Olimarabidopsis pumila clone BAC Op37I22, complete sequence
          Length = 84869

 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                        
Query: 6    aaccctgaatactttgagcttgacaagcctgactttgatccgattgctgctactggaatt 65
            |||||||| ||||||||||| || | |||  | || || || |||||||| | ||| |||
Sbjct: 2803 aaccctgattactttgagctggataggccgaatttcgaacccattgctgccattggtatt 2862

                                                     
Query: 66   gagatctggacaatgcaggatggcatcctttttgacaacat 106
            ||||||||||||||||| ||||| ||| | |||||||||||
Sbjct: 2863 gagatctggacaatgcaagatggtatcttatttgacaacat 2903
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>gb|DQ160064.1| Taraxacum officinale TO49-2 (To49-2) mRNA, partial cds
          Length = 416

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 37  actttgatccgattgctgctactggaattgagatctggacaatgcaggatgg 88
           ||||||| ||||||||||||| ||| |||||||||||||| ||||| |||||
Sbjct: 282 actttgagccgattgctgctattgggattgagatctggactatgcaagatgg 333



 Score = 42.1 bits (21), Expect = 0.77
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 146 ggagaagacatggaagcctaagttt 170
           ||||| |||||||||||||||||||
Sbjct: 391 ggagacgacatggaagcctaagttt 415
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>ref|NM_125573.2| Arabidopsis thaliana calcium ion binding AT5G61790 mRNA, complete cds
          Length = 1998

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                        
Query: 63   attgagatctggacaatgcaggatggcatcctttttgacaacat 106
            |||||||||||||||||||| ||||| ||| | |||||||||||
Sbjct: 1221 attgagatctggacaatgcaagatggtatcttgtttgacaacat 1264
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>gb|AY050777.1| Arabidopsis thaliana At5g61790 mRNA sequence
          Length = 1908

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                        
Query: 63   attgagatctggacaatgcaggatggcatcctttttgacaacat 106
            |||||||||||||||||||| ||||| ||| | |||||||||||
Sbjct: 1216 attgagatctggacaatgcaagatggtatcttgtttgacaacat 1259
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>emb|Z18242.1|ATCALHOM Arabidopsis thaliana calnexin homolog
          Length = 1858

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                        
Query: 63   attgagatctggacaatgcaggatggcatcctttttgacaacat 106
            |||||||||||||||||||| ||||| ||| | |||||||||||
Sbjct: 1194 attgagatctggacaatgcaagatggtatcttgtttgacaacat 1237
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>gb|AY114669.1| Arabidopsis thaliana calnexin-like protein precursor (At5g61790)
            mRNA, complete cds
          Length = 1671

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                        
Query: 63   attgagatctggacaatgcaggatggcatcctttttgacaacat 106
            |||||||||||||||||||| ||||| ||| | |||||||||||
Sbjct: 1108 attgagatctggacaatgcaagatggtatcttgtttgacaacat 1151
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>gb|AY065007.1| Arabidopsis thaliana AT5g61790/mac9_90 mRNA sequence
          Length = 1910

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                        
Query: 63   attgagatctggacaatgcaggatggcatcctttttgacaacat 106
            |||||||||||||||||||| ||||| ||| | |||||||||||
Sbjct: 1220 attgagatctggacaatgcaagatggtatcttgtttgacaacat 1263
to top
>gb|AY059880.1| Arabidopsis thaliana calnexin homolog precursor (MAC9.11) mRNA,
            complete cds
          Length = 1919

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                        
Query: 63   attgagatctggacaatgcaggatggcatcctttttgacaacat 106
            |||||||||||||||||||| ||||| ||| | |||||||||||
Sbjct: 1219 attgagatctggacaatgcaagatggtatcttgtttgacaacat 1262
to top
>gb|AY086864.1| Arabidopsis thaliana clone 2869 mRNA, complete sequence
          Length = 1897

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                        
Query: 63   attgagatctggacaatgcaggatggcatcctttttgacaacat 106
            |||||||||||||||||||| ||||| ||| | |||||||||||
Sbjct: 1221 attgagatctggacaatgcaagatggtatcttgtttgacaacat 1264
to top
>dbj|AB010069.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAC9
          Length = 57246

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                         
Query: 63    attgagatctggacaatgcaggatggcatcctttttgacaacat 106
             |||||||||||||||||||| ||||| ||| | |||||||||||
Sbjct: 33571 attgagatctggacaatgcaagatggtatcttgtttgacaacat 33528
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>gb|BT013681.1| Lycopersicon esculentum clone 132503F, mRNA sequence
          Length = 1836

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                        
Query: 9    cctgaatactttgagcttgacaagcctgactttgatccgattgctgctactggaattgag 68
            ||||| || ||||| |||||||| ||  ||||||| || || || || | ||| ||||||
Sbjct: 1066 cctgactattttgaacttgacaaacccaactttgagcctatcgcagccattggcattgag 1125

                                   
Query: 69   atctggacaatgcaggatggcat 91
            |||||||||||||| ||||||||
Sbjct: 1126 atctggacaatgcaagatggcat 1148
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>emb|Z35108.1|HTCALNEX H.tuberosus mRNA for calnexin
          Length = 1850

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 86/103 (83%), Gaps = 2/103 (1%)
 Strand = Plus / Plus

                                                                        
Query: 6    aaccctgaatactttgagcttgacaagcctgactttgatccgattgctgctactggaatt 65
            |||||||| |||||||| ||||| |||||  ||||||| ||||||||||| | ||| || 
Sbjct: 1131 aaccctgactactttgaacttgaaaagcccaactttgagccgattgctgcgattggtatc 1190

                                                       
Query: 66   ga-gatctggacaatgcaggatggcatcctttttgacaacatt 107
            || ||||||||| | ||| ||||| ||| | ||||||||||||
Sbjct: 1191 gaggatctggacca-gcaagatggaatcttgtttgacaacatt 1232
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>dbj|AB218598.1| Lycopersicon esculentum LeCNX61.0 mRNA for calnexin-like protein,
            complete cds
          Length = 1964

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                        
Query: 9    cctgaatactttgagcttgacaagcctgactttgatccgattgctgctactggaattgag 68
            ||||| || ||||| |||||||| ||  ||||||| || || || || | ||| ||||||
Sbjct: 1176 cctgactattttgaacttgacaaacccaactttgagcctatcgcagccattggcattgag 1235

                                   
Query: 69   atctggacaatgcaggatggcat 91
            |||||||||||||| ||||||||
Sbjct: 1236 atctggacaatgcaagatggcat 1258
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>ref|NM_120816.2| Arabidopsis thaliana calcium ion binding AT5G07340 mRNA, complete cds
          Length = 1877

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 48   attgctgctactggaattgagatctggacaatgcaggatggcatcctttttgacaacat 106
            |||||||| | ||| |||||||| ||||||||||| || || ||| | |||||||||||
Sbjct: 1186 attgctgccattggtattgagatatggacaatgcaagacggtatcttatttgacaacat 1244
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>gb|BT010385.1| Arabidopsis thaliana At5g07340 mRNA, complete cds
          Length = 1599

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 48   attgctgctactggaattgagatctggacaatgcaggatggcatcctttttgacaacat 106
            |||||||| | ||| |||||||| ||||||||||| || || ||| | |||||||||||
Sbjct: 1099 attgctgccattggtattgagatatggacaatgcaagacggtatcttatttgacaacat 1157
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>gb|BT001999.1| Arabidopsis thaliana calnexin homolog (At5g07340) mRNA, complete cds
          Length = 1879

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 48   attgctgctactggaattgagatctggacaatgcaggatggcatcctttttgacaacat 106
            |||||||| | ||| |||||||| ||||||||||| || || ||| | |||||||||||
Sbjct: 1188 attgctgccattggtattgagatatggacaatgcaagacggtatcttatttgacaacat 1246
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>emb|AL163912.1|ATT2I1 Arabidopsis thaliana DNA chromosome 5, BAC clone T2I1 (ESSA project)
          Length = 116763

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                        
Query: 48    attgctgctactggaattgagatctggacaatgcaggatggcatcctttttgacaacat 106
             |||||||| | ||| |||||||| ||||||||||| || || ||| | |||||||||||
Sbjct: 33886 attgctgccattggtattgagatatggacaatgcaagacggtatcttatttgacaacat 33944
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>gb|U08315.1|ATU08315 Arabidopsis thaliana Columbia calnexin homolog gene, complete cds
          Length = 3144

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 48   attgctgctactggaattgagatctggacaatgcaggatggcatcctttttgacaacat 106
            |||||||| | ||| |||||||| ||||||||||| || || ||| | |||||||||||
Sbjct: 1771 attgctgccattggtattgagatatggacaatgcaagacggtatcttatttgacaacat 1829
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>gb|AC159411.1| Trypanosoma brucei chromosome 3 clone RPCI93-1J15, complete sequence
          Length = 157158

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 175   ttgagaaggaaaagcagaaggctgaggaggctgc 208
             ||||||||| |||| ||| |||||||||||||||
Sbjct: 75916 ttgagaaggcaaagaagatggctgaggaggctgc 75883
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>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence
          Length = 1653225

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 175    ttgagaaggaaaagcagaaggctgaggaggctgc 208
              ||||||||| |||| ||| |||||||||||||||
Sbjct: 345960 ttgagaaggcaaagaagatggctgaggaggctgc 345993
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>gb|AC145376.3| Pan troglodytes BAC clone RP43-59A12 from 7, complete sequence
          Length = 221727

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 117   gatgatgagaaggtagccatgt 138
             ||||||||||||||||||||||
Sbjct: 30103 gatgatgagaaggtagccatgt 30082
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>ref|XM_818675.1| Trypanosoma brucei TREU927 clone RPCI93-1J15 ATP synthase subunit
            beta precursor (Tb927.3.1380) partial mRNA
          Length = 1560

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 175  ttgagaaggaaaagcagaaggctgaggaggctgc 208
            ||||||||| |||| ||| |||||||||||||||
Sbjct: 1478 ttgagaaggcaaagaagatggctgaggaggctgc 1511
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>ref|XM_380667.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00491.1)
            partial mRNA
          Length = 1689

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 66   gagatctggacaatgcaggatggcatcctttttgacaacatt 107
            ||||||||||| |||||| | | |||||| ||||||||||||
Sbjct: 1195 gagatctggaccatgcagaacgacatcctctttgacaacatt 1236
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>gb|AC142305.1| Pan troglodytes BAC clone RP43-130P22 from 7, complete sequence
          Length = 173535

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 117    gatgatgagaaggtagccatgt 138
              ||||||||||||||||||||||
Sbjct: 149924 gatgatgagaaggtagccatgt 149903
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>gb|AY007706.1| Trypanosoma brucei brucei ATPase beta subunit mRNA, complete cds;
            nuclear gene for kinetoplast product
          Length = 1557

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 175  ttgagaaggaaaagcagaaggctgaggaggctgc 208
            ||||||||| |||| ||| |||||||||||||||
Sbjct: 1475 ttgagaaggcaaagaagatggctgaggaggctgc 1508
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>gb|AC009401.3|AC009401 Homo sapiens PAC clone RP4-603O16 from 7q31-q35, complete sequence
          Length = 122079

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 117   gatgatgagaaggtagccatgt 138
             ||||||||||||||||||||||
Sbjct: 34725 gatgatgagaaggtagccatgt 34746
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>gb|AC078842.2|AC078842 Homo sapiens chromosome 7 clone RP11-102G17, complete sequence
          Length = 173844

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 117    gatgatgagaaggtagccatgt 138
              ||||||||||||||||||||||
Sbjct: 150198 gatgatgagaaggtagccatgt 150177
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>gb|AC160118.2| Mus musculus BAC clone RP23-440L7 from chromosome 9, complete
            sequence
          Length = 198672

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 193  aggctgaggaggctgcagcag 213
            |||||||||||||||||||||
Sbjct: 4842 aggctgaggaggctgcagcag 4822
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>gb|AC114674.10| Mus musculus chromosome 9, clone RP24-209N21, complete sequence
          Length = 203120

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 193    aggctgaggaggctgcagcag 213
              |||||||||||||||||||||
Sbjct: 149375 aggctgaggaggctgcagcag 149355
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>gb|AC164091.3| Mus musculus BAC clone RP23-97M20 from chromosome 3, complete sequence
          Length = 218807

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 38    ctttgatccgattgctgctac 58
             |||||||||||||||||||||
Sbjct: 81149 ctttgatccgattgctgctac 81169
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>gb|AC092532.17| Papio anubis clone rp41-110d13, complete sequence
          Length = 157944

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 196    ctgaggaggctgcagcagccg 216
              |||||||||||||||||||||
Sbjct: 113361 ctgaggaggctgcagcagccg 113341
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>gb|AC006549.28| Homo sapiens chromosome 22 clone p215k21 map 22q11, complete sequence
          Length = 174840

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 196    ctgaggaggctgcagcagccg 216
              |||||||||||||||||||||
Sbjct: 152035 ctgaggaggctgcagcagccg 152055
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>gb|AC058790.14| Homo sapiens chromosome 22 clone b518b9 map 22q11, complete sequence
          Length = 184929

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 196    ctgaggaggctgcagcagccg 216
              |||||||||||||||||||||
Sbjct: 132155 ctgaggaggctgcagcagccg 132175
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>gb|AC007663.29| Homo sapiens chromosome 22 clone b444p24 map 22q11, complete sequence
          Length = 168239

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 196    ctgaggaggctgcagcagccg 216
              |||||||||||||||||||||
Sbjct: 120281 ctgaggaggctgcagcagccg 120301
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>gb|AC169088.2| Gallus gallus BAC clone CH261-100B3 from chromosome ul, complete
             sequence
          Length = 214859

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 216   gagtcagaggacctttctgag 236
             |||||||||||||||||||||
Sbjct: 18128 gagtcagaggacctttctgag 18108
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>emb|AL645545.8| Mouse DNA sequence from clone RP23-203J4 on chromosome X, complete
              sequence
          Length = 181243

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 93     ctttttgacaacattctaatt 113
              |||||||||||||||||||||
Sbjct: 163520 ctttttgacaacattctaatt 163540
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>ref|XM_363681.1| Magnaporthe grisea 70-15 hypothetical protein (MG01607.4) partial
            mRNA
          Length = 1734

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                    
Query: 64   ttgagatctggacaatgcaggatggcatcctttttgacaa 103
            ||||||||||||| |||||| | | |||||| ||||||||
Sbjct: 1250 ttgagatctggaccatgcagaacgacatcctctttgacaa 1289
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>gb|AC079216.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-353E8, complete
              sequence
          Length = 221748

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 45     ccgattgctgctactggaattgag 68
              |||||||||||||| |||||||||
Sbjct: 205005 ccgattgctgctacgggaattgag 204982
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>ref|XM_749569.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g09570)
           partial mRNA
          Length = 618

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 177 gagaaggaaaagcagaaggctgaggaggctgc 208
           |||||||||||||||| ||| || ||||||||
Sbjct: 520 gagaaggaaaagcagatggcggaagaggctgc 551
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>emb|AL109731.1|SPBC19C2 S.pombe chromosome II cosmid c19C2
          Length = 30799

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   gacaacattctaattgctga 118
            ||||||||||||||||||||
Sbjct: 4611 gacaacattctaattgctga 4592
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>emb|BX890584.6| Mouse DNA sequence from clone RP23-160I11 on chromosome X, complete
              sequence
          Length = 120359

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     ttttgacaacattctaattg 114
              ||||||||||||||||||||
Sbjct: 118889 ttttgacaacattctaattg 118870
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>gb|AC010133.4|AC010133 Homo sapiens clone RP11-118E9, complete sequence
          Length = 152074

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    gtctatcttggagaagacat 156
              ||||||||||||||||||||
Sbjct: 120517 gtctatcttggagaagacat 120536
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>ref|NM_001004922.1| Xenopus tropicalis MGC89099 protein (MGC89099), mRNA
          Length = 1451

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 97   ttgacaacattctaattgct 116
            ||||||||||||||||||||
Sbjct: 1208 ttgacaacattctaattgct 1227
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>gb|AC091902.2| Homo sapiens chromosome 5 clone RP11-16L24, complete sequence
          Length = 188877

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 197    tgaggaggctgcagcagccg 216
              ||||||||||||||||||||
Sbjct: 120315 tgaggaggctgcagcagccg 120334
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>gb|AC139715.1| Homo sapiens BAC clone RP11-399D2 from 4, complete sequence
          Length = 174076

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 176   tgagaaggaaaagcagaagg 195
             ||||||||||||||||||||
Sbjct: 45713 tgagaaggaaaagcagaagg 45694
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>gb|BC075379.1| Xenopus tropicalis MGC89099 protein, mRNA (cDNA clone MGC:89099
            IMAGE:7006450), complete cds
          Length = 1451

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 97   ttgacaacattctaattgct 116
            ||||||||||||||||||||
Sbjct: 1208 ttgacaacattctaattgct 1227
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>emb|CR760333.2| Xenopus tropicalis finished cDNA, clone TNeu050b22
          Length = 1147

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 97  ttgacaacattctaattgct 116
           ||||||||||||||||||||
Sbjct: 909 ttgacaacattctaattgct 928
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>emb|BX088567.6| Mouse DNA sequence from clone RP23-21L20 on chromosome X, complete
           sequence
          Length = 150122

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 95  ttttgacaacattctaattg 114
           ||||||||||||||||||||
Sbjct: 530 ttttgacaacattctaattg 511
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>gb|AC134897.4| Mus musculus BAC clone RP23-459D9 from 6, complete sequence
          Length = 173574

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 45     ccgattgctgctactggaattgag 68
              |||||||||||||| |||||||||
Sbjct: 112613 ccgattgctgctacgggaattgag 112636


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,667,223
Number of Sequences: 3902068
Number of extensions: 2667223
Number of successful extensions: 65709
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65588
Number of HSP's gapped (non-prelim): 115
length of query: 237
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 215
effective length of database: 17,147,199,772
effective search space: 3686647950980
effective search space used: 3686647950980
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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