| Clone Name | basd27l04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_464479.1| Oryza sativa (japonica cultivar-group), mRNA Length = 675 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 500 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 559 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 560 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 619
>ref|XM_464478.1| Oryza sativa (japonica cultivar-group), mRNA Length = 988 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 648 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 707 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 708 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 767
>ref|XM_507457.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1078 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 648 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 707 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 708 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 767
>ref|XM_507456.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1121 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 648 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 707 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 708 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 767
>ref|XM_507455.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1112 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 631 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 690 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 691 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 750
>ref|XM_507454.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1121 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 640 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 699 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 700 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 759
>ref|XM_507453.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1127 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 646 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 705 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 706 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 765
>ref|XM_507452.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1127 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 646 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 705 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 706 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 765
>ref|XM_507451.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 648 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 707 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 708 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 767
>ref|XM_507450.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 648 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 707 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 708 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 767
>ref|XM_507449.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 648 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 707 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 708 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 767
>ref|XM_507448.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 648 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 707 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 708 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 767
>ref|XM_464480.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 536 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 595 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 596 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 655
>ref|XM_507447.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1145 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 664 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 723 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 724 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 783
>ref|XM_507446.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1145 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 664 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 723 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 724 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 783
>ref|XM_507445.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1148 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 667 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 726 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 727 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 786
>ref|XM_507444.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1148 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 667 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 726 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 727 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 786
>ref|XM_507443.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1151 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 670 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 729 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 730 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 789
>ref|XM_507442.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1168 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 687 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 746 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 747 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 806
>ref|XM_507441.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1198 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 717 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 776 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 777 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 836
>ref|XM_506748.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 647 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 706 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 707 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 766
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Minus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 5469129 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 5469070 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 5469069 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 5469010 Score = 44.1 bits (22), Expect = 0.097 Identities = 22/22 (100%) Strand = Plus / Plus Query: 76 agctcaagctcaaggagatcaa 97 |||||||||||||||||||||| Sbjct: 32601143 agctcaagctcaaggagatcaa 32601164
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1524_D08 Length = 143046 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Minus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 122710 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 122651 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 122650 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 122591
>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0026H03 Length = 151827 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Minus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 13864 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 13805 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 13804 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 13745
>dbj|AK109398.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A11, full insert sequence Length = 1128 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 647 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 706 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 707 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 766
>dbj|AK119554.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E06, full insert sequence Length = 1129 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 648 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 707 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 708 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 767
>dbj|AK106085.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B02, full insert sequence Length = 1198 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 717 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 776 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 777 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 836
>dbj|AK104557.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-G04, full insert sequence Length = 1112 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 631 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 690 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 691 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 750
>dbj|AK104535.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-E04, full insert sequence Length = 1148 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 667 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 726 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 727 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 786
>dbj|AK104522.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-E10, full insert sequence Length = 1078 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 648 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 707 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 708 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 767
>dbj|AK104734.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C11, full insert sequence Length = 1121 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 640 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 699 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 700 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 759
>dbj|AK104646.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H01, full insert sequence Length = 1127 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 646 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 705 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 706 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 765
>dbj|AK104636.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D09, full insert sequence Length = 1126 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 645 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 704 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 705 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 764
>dbj|AK104469.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D06, full insert sequence Length = 1145 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 664 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 723 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 724 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 783
>dbj|AK104458.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B05, full insert sequence Length = 1129 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 648 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 707 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 708 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 767
>dbj|AK104446.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-B11, full insert sequence Length = 1148 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 667 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 726 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 727 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 786
>dbj|AK104392.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-H10, full insert sequence Length = 1151 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 670 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 729 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 730 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 789
>dbj|AK104385.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-E04, full insert sequence Length = 1121 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 648 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 707 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 708 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 767
>dbj|AK104348.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-F11, full insert sequence Length = 1145 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 664 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 723 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 724 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 783
>dbj|AK104215.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H02, full insert sequence Length = 1129 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 648 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 707 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 708 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 767
>dbj|AK104096.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-B04, full insert sequence Length = 1129 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 648 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 707 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 708 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 767
>dbj|AK068102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130I24, full insert sequence Length = 1017 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 536 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 595 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 596 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 655
>dbj|AK060970.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-D07, full insert sequence Length = 1168 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 687 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 746 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 747 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 806
>dbj|AK060143.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-A02, full insert sequence Length = 988 Score = 139 bits (70), Expect = 2e-30 Identities = 107/120 (89%) Strand = Plus / Plus Query: 9 gcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcgagaangag 68 |||||||||||||| || |||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 648 gcctaccccggcggcccgctcttcaacccgctcggcttcgggaccaagagcgaggcggag 707 Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||| Sbjct: 708 atgaaggagctcaagctcaaggagatcaagaatggcaggctcgccatgctcgccttcctc 767
>gb|AY104614.1| Zea mays PCO084486 mRNA sequence Length = 1214 Score = 135 bits (68), Expect = 3e-29 Identities = 113/128 (88%), Gaps = 3/128 (2%) Strand = Plus / Plus Query: 1 gcgaccccgcctaccccggcgggcccatcttcaacccactcgggttcggcaccaagagcg 60 ||||||| ||||||||||||||||| |||||||||| ||||| ||||||| ||| || Sbjct: 746 gcgacccgtcctaccccggcgggcccctcttcaacccgctcggcttcggca---agaccg 802 Query: 61 agaangagatgaaggagctcaagctcaaggagatcaagaacggccgtctngccatgctcg 120 |||| |||||||| |||||||||||||||||||||||||||||| | || |||||||||| Sbjct: 803 agaaggagatgaatgagctcaagctcaaggagatcaagaacggcaggctcgccatgctcg 862 Query: 121 ccttcctc 128 || ||||| Sbjct: 863 ccatcctc 870
>gb|AY106149.1| Zea mays PCO102434 mRNA sequence Length = 1081 Score = 69.9 bits (35), Expect = 2e-09 Identities = 43/46 (93%) Strand = Plus / Plus Query: 80 caagctcaaggagatcaagaacggccgtctngccatgctcgccttc 125 ||||||||||||||||||||||||||| || |||||||| |||||| Sbjct: 628 caagctcaaggagatcaagaacggccgcctcgccatgctggccttc 673
>dbj|AB122115.1| Chlamydomonas reinhardtii LhcI-2 gene for light-harvesting chlorophyll-a/b protein of photosystem I (Type III), complete cds Length = 2389 Score = 67.9 bits (34), Expect = 7e-09 Identities = 37/38 (97%) Strand = Plus / Plus Query: 69 atgaaggagctcaagctcaaggagatcaagaacggccg 106 ||||||||||| |||||||||||||||||||||||||| Sbjct: 1902 atgaaggagctgaagctcaaggagatcaagaacggccg 1939
>gb|S68728.1| LHC Ib-21=light-harvesting complex I [Hordeum vulgare=barley, Prato, mRNA Chloroplast, 878 nt] Length = 878 Score = 61.9 bits (31), Expect = 4e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 73 aggagctcaagctcaaggagatcaagaacgg 103 ||||||||||||||||||||||||||||||| Sbjct: 482 aggagctcaagctcaaggagatcaagaacgg 512
>dbj|AB122114.1| Chlamydomonas reinhardtii LhcI-1 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 2649 Score = 61.9 bits (31), Expect = 4e-07 Identities = 36/38 (94%) Strand = Plus / Plus Query: 81 aagctcaaggagatcaagaacggccgtctngccatgct 118 ||||| ||||||||||||||||||||||| |||||||| Sbjct: 2283 aagctgaaggagatcaagaacggccgtctggccatgct 2320
>gb|AF218305.1|AF218305 Hordeum vulgare chlorophyll a/b binding protein precursor (lhca1) mRNA, complete cds; nuclear gene for chloroplast product Length = 784 Score = 61.9 bits (31), Expect = 4e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 73 aggagctcaagctcaaggagatcaagaacgg 103 ||||||||||||||||||||||||||||||| Sbjct: 600 aggagctcaagctcaaggagatcaagaacgg 630
>emb|X84308.1|HVLHCA2 H.vulgare mRNA for photosysteme I antenna protein Length = 1050 Score = 60.0 bits (30), Expect = 2e-06 Identities = 35/37 (94%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgcc 122 ||||||||||||||||||||| || |||||||||||| Sbjct: 695 caaggagatcaagaacggccgcctggccatgctcgcc 731
>gb|AF110786.1|AF110786 Volvox carteri f. nagariensis clone G18 light harvesting complex a protein (lhca) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1047 Score = 58.0 bits (29), Expect = 6e-06 Identities = 34/36 (94%) Strand = Plus / Plus Query: 81 aagctcaaggagatcaagaacggccgtctngccatg 116 ||||| ||||||||||||||||||||||| |||||| Sbjct: 617 aagctgaaggagatcaagaacggccgtctggccatg 652
>dbj|AB050007.2| Chlamydomonas reinhardtii lhcb5 mRNA for CP26, complete cds Length = 952 Score = 58.0 bits (29), Expect = 6e-06 Identities = 40/44 (90%) Strand = Plus / Plus Query: 73 aggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||| ||| |||||||||||||||||||||| || |||||| Sbjct: 732 aggagctgaaggtcaaggagatcaagaacggccgcctggccatg 775
>gb|AY105333.1| Zea mays PCO095488 mRNA sequence Length = 794 Score = 58.0 bits (29), Expect = 6e-06 Identities = 37/40 (92%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgccttc 125 |||||||||||||||||| || || ||||||||||||||| Sbjct: 314 caaggagatcaagaacgggcggctcgccatgctcgccttc 353
>gb|U22329.1|VCU22329 Volvox carteri light harvesting complex a mRNA, complete cds Length = 1085 Score = 58.0 bits (29), Expect = 6e-06 Identities = 37/40 (92%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgccttc 125 ||||||||||||||||||||| || |||||||| |||||| Sbjct: 662 caaggagatcaagaacggccgcctggccatgctggccttc 701
>ref|NM_192636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 Score = 56.0 bits (28), Expect = 3e-05 Identities = 39/43 (90%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||||||| | |||||||||||||||||||| || |||||| Sbjct: 609 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatg 651
>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 Score = 56.0 bits (28), Expect = 3e-05 Identities = 39/43 (90%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||||||| | |||||||||||||||||||| || |||||| Sbjct: 687 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatg 729
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 56.0 bits (28), Expect = 3e-05 Identities = 39/43 (90%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||||||| | |||||||||||||||||||| || |||||| Sbjct: 10793605 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatg 10793647 Score = 50.1 bits (25), Expect = 0.002 Identities = 36/40 (90%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgccttc 125 |||||||||||||||||| | || ||||||||||||||| Sbjct: 16234585 caaggagatcaagaacgggaggctcgccatgctcgccttc 16234624
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 56.0 bits (28), Expect = 3e-05 Identities = 39/43 (90%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||||||| | |||||||||||||||||||| || |||||| Sbjct: 23604152 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatg 23604194 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||||||||||||||||| || |||||| Sbjct: 30024959 gagctcaaggtgaaggagatcaagaacggccgcctcgccatg 30025000 Score = 38.2 bits (19), Expect = 6.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 67 agatgaaggagctcaagctcaag 89 |||||||||||||| |||||||| Sbjct: 35478997 agatgaaggagctcgagctcaag 35478975
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 56.0 bits (28), Expect = 3e-05 Identities = 39/43 (90%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||||||| | |||||||||||||||||||| || |||||| Sbjct: 17328 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatg 17370
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 56.0 bits (28), Expect = 3e-05 Identities = 39/43 (90%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||||||| | |||||||||||||||||||| || |||||| Sbjct: 66851 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatg 66893
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 56.0 bits (28), Expect = 3e-05 Identities = 39/43 (90%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||||||| | |||||||||||||||||||| || |||||| Sbjct: 130223 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatg 130265
>dbj|AB122117.1| Chlamydomonas reinhardtii LhcI-4 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1970 Score = 56.0 bits (28), Expect = 3e-05 Identities = 42/47 (89%) Strand = Plus / Plus Query: 81 aagctcaaggagatcaagaacggccgtctngccatgctcgccttcct 127 ||||| |||||| ||||||||||||| || |||||||| |||||||| Sbjct: 1648 aagctgaaggaggtcaagaacggccgcctggccatgctggccttcct 1694
>dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full insert sequence Length = 1180 Score = 56.0 bits (28), Expect = 3e-05 Identities = 39/43 (90%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||||||| | |||||||||||||||||||| || |||||| Sbjct: 680 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatg 722
>dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full insert sequence Length = 1126 Score = 56.0 bits (28), Expect = 3e-05 Identities = 39/43 (90%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||||||| | |||||||||||||||||||| || |||||| Sbjct: 679 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatg 721
>emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding protein Length = 1442 Score = 56.0 bits (28), Expect = 3e-05 Identities = 39/43 (90%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||||||| | |||||||||||||||||||| || |||||| Sbjct: 1109 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatg 1151
>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full insert sequence Length = 1013 Score = 56.0 bits (28), Expect = 3e-05 Identities = 39/43 (90%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||||||| | |||||||||||||||||||| || |||||| Sbjct: 673 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatg 715
>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full insert sequence Length = 1021 Score = 56.0 bits (28), Expect = 3e-05 Identities = 39/43 (90%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||||||| | |||||||||||||||||||| || |||||| Sbjct: 678 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatg 720
>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full insert sequence Length = 1056 Score = 56.0 bits (28), Expect = 3e-05 Identities = 39/43 (90%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||||||| | |||||||||||||||||||| || |||||| Sbjct: 680 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatg 722
>dbj|AK061619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E02, full insert sequence Length = 650 Score = 56.0 bits (28), Expect = 3e-05 Identities = 39/43 (90%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||||||| | |||||||||||||||||||| || |||||| Sbjct: 209 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatg 251
>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full insert sequence Length = 1235 Score = 56.0 bits (28), Expect = 3e-05 Identities = 39/43 (90%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||||||| | |||||||||||||||||||| || |||||| Sbjct: 678 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatg 720
>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full insert sequence Length = 1045 Score = 56.0 bits (28), Expect = 3e-05 Identities = 39/43 (90%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||||||| | |||||||||||||||||||| || |||||| Sbjct: 678 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatg 720
>ref|NM_191799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||||||||||||||||| || |||||| Sbjct: 622 gagctcaaggtgaaggagatcaagaacggccgcctcgccatg 663
>ref|XM_478729.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| |||||||||||||||| ||||| || |||||| Sbjct: 659 gagctcaaggtcaaggagatcaagaatggccgcctcgccatg 700
>ref|XM_507374.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 995 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| |||||||||||||||| ||||| || |||||| Sbjct: 683 gagctcaaggtcaaggagatcaagaatggccgcctcgccatg 724
>ref|XM_507373.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1007 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| |||||||||||||||| ||||| || |||||| Sbjct: 683 gagctcaaggtcaaggagatcaagaatggccgcctcgccatg 724
>ref|XM_507372.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1108 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| |||||||||||||||| ||||| || |||||| Sbjct: 685 gagctcaaggtcaaggagatcaagaatggccgcctcgccatg 726
>ref|XM_507371.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1000 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| |||||||||||||||| ||||| || |||||| Sbjct: 688 gagctcaaggtcaaggagatcaagaatggccgcctcgccatg 729
>ref|XM_507370.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1012 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| |||||||||||||||| ||||| || |||||| Sbjct: 688 gagctcaaggtcaaggagatcaagaatggccgcctcgccatg 729
>ref|XM_507369.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1032 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| |||||||||||||||| ||||| || |||||| Sbjct: 690 gagctcaaggtcaaggagatcaagaatggccgcctcgccatg 731
>ref|XM_506410.2| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1159 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| |||||||||||||||| ||||| || |||||| Sbjct: 723 gagctcaaggtcaaggagatcaagaatggccgcctcgccatg 764
>gb|AY646197.1| Chlorella pyrenoidosa chloroplast light-harvesting complex II (Lhc II) mRNA, partial cds; nuclear gene for chloroplast product Length = 537 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | ||||||||||||||||| ||||| |||||| Sbjct: 388 gagctcaaggtgaaggagatcaagaacggtcgtctggccatg 429
>gb|AF104633.2| Chlamydomonas reinhardtii light harvesting complex I protein precursor (Lhca1) mRNA, complete cds Length = 1129 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||| ||||| |||||||||||||||||||| || |||||| Sbjct: 560 gagctgaagctgaaggagatcaagaacggccgcctggccatg 601
>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase IV-1 gene, complete cds Length = 15000 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Minus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||||||||||||||||| || |||||| Sbjct: 14052 gagctcaaggtgaaggagatcaagaacggccgcctcgccatg 14011
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| |||||||||||||||| ||||| || |||||| Sbjct: 22434696 gagctcaaggtcaaggagatcaagaatggccgcctcgccatg 22434737 Score = 52.0 bits (26), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgcc 122 |||||||||||||||||| || || |||||||||||| Sbjct: 23305179 caaggagatcaagaacgggcggctcgccatgctcgcc 23305215 Score = 42.1 bits (21), Expect = 0.38 Identities = 35/40 (87%) Strand = Plus / Minus Query: 89 ggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||| ||| ||| || |||||| ||||||||||| Sbjct: 22263205 ggagatcaagcacgcccgcctcgccatggtcgccttcctc 22263166
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||||||||||||||||| || |||||| Sbjct: 20949 gagctcaaggtgaaggagatcaagaacggccgcctcgccatg 20990
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| |||||||||||||||| ||||| || |||||| Sbjct: 95763 gagctcaaggtcaaggagatcaagaatggccgcctcgccatg 95804
>emb|X63205.1|ZMCAB48 Zea mays cab48 gene for chlorophyll a/b binding protein precursor Length = 2780 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||||||||||||||||| || |||||| Sbjct: 2545 gagctcaaggtgaaggagatcaagaacggccgcctcgccatg 2586
>dbj|AB122119.1| Chlamydomonas reinhardtii LhcI-6 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1664 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||| ||||| |||||||||||||||||||| || |||||| Sbjct: 1307 gagctgaagctgaaggagatcaagaacggccgcctggccatg 1348
>dbj|AB122118.1| Chlamydomonas reinhardtii LhcI-5 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1886 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||||||||||||||||| || |||||| Sbjct: 1401 gagctcaaggttaaggagatcaagaacggccgcctggccatg 1442
>dbj|AK119545.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-G05, full insert sequence Length = 1012 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| |||||||||||||||| ||||| || |||||| Sbjct: 688 gagctcaaggtcaaggagatcaagaatggccgcctcgccatg 729
>dbj|AK119533.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F03, full insert sequence Length = 1000 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| |||||||||||||||| ||||| || |||||| Sbjct: 688 gagctcaaggtcaaggagatcaagaatggccgcctcgccatg 729
>emb|X54856.1|CMCAB C.moewusii cab mRNA for chlorophyll a/b binding protein Length = 1011 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||||||||||||||||| || |||||| Sbjct: 627 gagctcaaggtgaaggagatcaagaacggccgccttgccatg 668
>emb|X65119.1|CRCABI1MR C.reinhardtii cabI-1 mRNA for light harvesting complex protein I-20 (LHCPI-20) Length = 1073 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||| ||||| |||||||||||||||||||| || |||||| Sbjct: 509 gagctgaagctgaaggagatcaagaacggccgcctggccatg 550
>dbj|AK104495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C03, full insert sequence Length = 973 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| |||||||||||||||| ||||| || |||||| Sbjct: 659 gagctcaaggtcaaggagatcaagaatggccgcctcgccatg 700
>dbj|AK104465.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C07, full insert sequence Length = 1012 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| |||||||||||||||| ||||| || |||||| Sbjct: 688 gagctcaaggtcaaggagatcaagaatggccgcctcgccatg 729
>dbj|AK104224.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E11, full insert sequence Length = 995 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| |||||||||||||||| ||||| || |||||| Sbjct: 683 gagctcaaggtcaaggagatcaagaatggccgcctcgccatg 724
>dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C12, full insert sequence Length = 1055 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||||||||||||||||| || |||||| Sbjct: 703 gagctcaaggtgaaggagatcaagaacggccgcctcgccatg 744
>dbj|AK103999.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D10, full insert sequence Length = 1007 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| |||||||||||||||| ||||| || |||||| Sbjct: 683 gagctcaaggtcaaggagatcaagaatggccgcctcgccatg 724
>dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B02, full insert sequence Length = 1055 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||||||||||||||||| || |||||| Sbjct: 703 gagctcaaggtgaaggagatcaagaacggccgcctcgccatg 744
>dbj|AK103926.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D02, full insert sequence Length = 1000 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| |||||||||||||||| ||||| || |||||| Sbjct: 688 gagctcaaggtcaaggagatcaagaatggccgcctcgccatg 729
>dbj|AK068972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001G03, full insert sequence Length = 1107 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| |||||||||||||||| ||||| || |||||| Sbjct: 684 gagctcaaggtcaaggagatcaagaatggccgcctcgccatg 725
>dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D08, full insert sequence Length = 1057 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||||||||||||||||| || |||||| Sbjct: 705 gagctcaaggtgaaggagatcaagaacggccgcctcgccatg 746
>dbj|AK061512.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G12, full insert sequence Length = 1032 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| |||||||||||||||| ||||| || |||||| Sbjct: 690 gagctcaaggtcaaggagatcaagaatggccgcctcgccatg 731
>dbj|AK058312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H12, full insert sequence Length = 1040 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| |||||||||||||||| ||||| || |||||| Sbjct: 688 gagctcaaggtcaaggagatcaagaatggccgcctcgccatg 729
>dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E06, full insert sequence Length = 1057 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||||||||||||||||| || |||||| Sbjct: 705 gagctcaaggtgaaggagatcaagaacggccgcctcgccatg 746
>gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protein (kcdl895) mRNA, complete cds Length = 1022 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||||||||||||||||| || |||||| Sbjct: 664 gagctcaaggtgaaggagatcaagaacggccgcctcgccatg 705
>gb|M60049.1|DUNCAB D.tertiolecta 28.5-kDa LHCII apoprotein mRNA, complete cds Length = 1041 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||| ||| |||||||||||||||||||||| || |||||| Sbjct: 631 gagctgaaggtcaaggagatcaagaacggccgcctggccatg 672
>ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1062 Score = 52.0 bits (26), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgcc 122 |||||||||||||||||| || || |||||||||||| Sbjct: 665 caaggagatcaagaacgggcggctcgccatgctcgcc 701
>ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1059 Score = 52.0 bits (26), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgcc 122 |||||||||||||||||| || || |||||||||||| Sbjct: 666 caaggagatcaagaacgggcggctcgccatgctcgcc 702
>ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1058 Score = 52.0 bits (26), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgcc 122 |||||||||||||||||| || || |||||||||||| Sbjct: 668 caaggagatcaagaacgggcggctcgccatgctcgcc 704
>ref|XM_478841.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1047 Score = 52.0 bits (26), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgcc 122 |||||||||||||||||| || || |||||||||||| Sbjct: 671 caaggagatcaagaacgggcggctcgccatgctcgcc 707
>ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1061 Score = 52.0 bits (26), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgcc 122 |||||||||||||||||| || || |||||||||||| Sbjct: 671 caaggagatcaagaacgggcggctcgccatgctcgcc 707
>ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1065 Score = 52.0 bits (26), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgcc 122 |||||||||||||||||| || || |||||||||||| Sbjct: 672 caaggagatcaagaacgggcggctcgccatgctcgcc 708
>ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1069 Score = 52.0 bits (26), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgcc 122 |||||||||||||||||| || || |||||||||||| Sbjct: 672 caaggagatcaagaacgggcggctcgccatgctcgcc 708
>ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1068 Score = 52.0 bits (26), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgcc 122 |||||||||||||||||| || || |||||||||||| Sbjct: 675 caaggagatcaagaacgggcggctcgccatgctcgcc 711
>gb|AY954736.1| Ostreococcus tauri chloroplast light-harvesting complex I protein precursor Lhca5 gene, complete cds; nuclear gene for chloroplast product Length = 957 Score = 52.0 bits (26), Expect = 4e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 81 aagctcaaggagatcaagaacggccg 106 |||||||||||||||||||||||||| Sbjct: 784 aagctcaaggagatcaagaacggccg 809
>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1065_B06 Length = 113170 Score = 52.0 bits (26), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgcc 122 |||||||||||||||||| || || |||||||||||| Sbjct: 60437 caaggagatcaagaacgggcggctcgccatgctcgcc 60473
>dbj|AK109399.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C08, full insert sequence Length = 1111 Score = 52.0 bits (26), Expect = 4e-04 Identities = 37/41 (90%) Strand = Plus / Plus Query: 76 agctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||||| |||||||||||||||| ||||| || |||||| Sbjct: 689 agctcaaggtcaaggagatcaagaatggccgcctcgccatg 729
>dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F08, full insert sequence Length = 1088 Score = 52.0 bits (26), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgcc 122 |||||||||||||||||| || || |||||||||||| Sbjct: 686 caaggagatcaagaacgggcggctcgccatgctcgcc 722
>emb|X79277.1|LTLHAB L.temulentum lhaB mRNA Length = 1026 Score = 52.0 bits (26), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgcc 122 ||||||||||||||| ||||| || |||||||||||| Sbjct: 651 caaggagatcaagaatggccgcctcgccatgctcgcc 687
>dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B06, full insert sequence Length = 1069 Score = 52.0 bits (26), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgcc 122 |||||||||||||||||| || || |||||||||||| Sbjct: 672 caaggagatcaagaacgggcggctcgccatgctcgcc 708
>dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C01, full insert sequence Length = 1065 Score = 52.0 bits (26), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgcc 122 |||||||||||||||||| || || |||||||||||| Sbjct: 672 caaggagatcaagaacgggcggctcgccatgctcgcc 708
>dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-H09, full insert sequence Length = 1080 Score = 52.0 bits (26), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgcc 122 |||||||||||||||||| || || |||||||||||| Sbjct: 702 caaggagatcaagaacgggcggctcgccatgctcgcc 738
>dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D02, full insert sequence Length = 1058 Score = 52.0 bits (26), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgcc 122 |||||||||||||||||| || || |||||||||||| Sbjct: 668 caaggagatcaagaacgggcggctcgccatgctcgcc 704
>dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E10, full insert sequence Length = 1061 Score = 52.0 bits (26), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgcc 122 |||||||||||||||||| || || |||||||||||| Sbjct: 671 caaggagatcaagaacgggcggctcgccatgctcgcc 707
>dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G05, full insert sequence Length = 1062 Score = 52.0 bits (26), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgcc 122 |||||||||||||||||| || || |||||||||||| Sbjct: 665 caaggagatcaagaacgggcggctcgccatgctcgcc 701
>dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H03, full insert sequence Length = 1059 Score = 52.0 bits (26), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgcc 122 |||||||||||||||||| || || |||||||||||| Sbjct: 666 caaggagatcaagaacgggcggctcgccatgctcgcc 702
>dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040A06, full insert sequence Length = 1646 Score = 52.0 bits (26), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgcc 122 |||||||||||||||||| || || |||||||||||| Sbjct: 962 caaggagatcaagaacgggcggctcgccatgctcgcc 998
>dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C01, full insert sequence Length = 1068 Score = 52.0 bits (26), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgcc 122 |||||||||||||||||| || || |||||||||||| Sbjct: 675 caaggagatcaagaacgggcggctcgccatgctcgcc 711
>gb|AY105356.1| Zea mays PCO075138 mRNA sequence Length = 1317 Score = 52.0 bits (26), Expect = 4e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgcc 122 |||||||||||||||||| || || |||||||||||| Sbjct: 818 caaggagatcaagaacggacgcctcgccatgctcgcc 854
>gb|AY954738.1| Ostreococcus tauri chloroplast chlorophyll a/b-binding protein CP26 precursor Lhcb5 gene, complete cds; nuclear gene for chloroplast product Length = 1445 Score = 50.1 bits (25), Expect = 0.002 Identities = 39/44 (88%) Strand = Plus / Plus Query: 78 ctcaagctcaaggagatcaagaacggccgtctngccatgctcgc 121 |||||| | ||||||||||||||||||||||| || ||| |||| Sbjct: 1266 ctcaaggttaaggagatcaagaacggccgtctcgcgatgatcgc 1309
>gb|AY267624.1| Bigelowiella natans chlorophyll a/b-binding protein II 2 mRNA, complete cds; nuclear gene for plastid product Length = 1147 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Plus Query: 85 tcaaggagatcaagaacggccgtct 109 ||||||||||||||||||||||||| Sbjct: 876 tcaaggagatcaagaacggccgtct 900
>emb|AJ821811.1| Guillardia theta partial mRNA for light harvesting protein 5 (lhc5 gene) Length = 678 Score = 50.1 bits (25), Expect = 0.002 Identities = 33/36 (91%) Strand = Plus / Plus Query: 90 gagatcaagaacggccgtctngccatgctcgccttc 125 ||||||||||||||||| || |||||| |||||||| Sbjct: 577 gagatcaagaacggccgccttgccatgatcgccttc 612
>gb|AF268324.1|AF268324 Guillardia theta light-harvesting complex protein LHCC13 mRNA, complete cds Length = 787 Score = 50.1 bits (25), Expect = 0.002 Identities = 33/36 (91%) Strand = Plus / Plus Query: 90 gagatcaagaacggccgtctngccatgctcgccttc 125 ||||||||||||||||| || |||||| |||||||| Sbjct: 513 gagatcaagaacggccgcctcgccatgatcgccttc 548
>gb|AF268322.1|AF268322 Guillardia theta light-harvesting complex protein LHCC4 mRNA, partial cds Length = 715 Score = 50.1 bits (25), Expect = 0.002 Identities = 33/36 (91%) Strand = Plus / Plus Query: 90 gagatcaagaacggccgtctngccatgctcgccttc 125 ||||||||| |||||||| | ||||||||||||||| Sbjct: 266 gagatcaagcacggccgtatcgccatgctcgccttc 301 Score = 44.1 bits (22), Expect = 0.097 Identities = 30/33 (90%) Strand = Plus / Plus Query: 90 gagatcaagaacggccgtctngccatgctcgcc 122 ||||||||||||||||| || || ||||||||| Sbjct: 575 gagatcaagaacggccgccttgctatgctcgcc 607
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 50.1 bits (25), Expect = 0.002 Identities = 36/40 (90%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgccttc 125 |||||||||||||||||| | || ||||||||||||||| Sbjct: 51101 caaggagatcaagaacgggaggctcgccatgctcgccttc 51140
>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556H01 Length = 149800 Score = 50.1 bits (25), Expect = 0.002 Identities = 36/40 (90%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgccttc 125 |||||||||||||||||| | || ||||||||||||||| Sbjct: 139186 caaggagatcaagaacgggaggctcgccatgctcgccttc 139225
>emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein Length = 934 Score = 50.1 bits (25), Expect = 0.002 Identities = 36/40 (90%) Strand = Plus / Plus Query: 77 gctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||| | |||||||||||||||||||| || |||||| Sbjct: 645 gctcaaggtgaaggagatcaagaacggccgccttgccatg 684
>dbj|AK067780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114F21, full insert sequence Length = 919 Score = 50.1 bits (25), Expect = 0.002 Identities = 36/40 (90%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgccttc 125 |||||||||||||||||| | || ||||||||||||||| Sbjct: 708 caaggagatcaagaacgggaggctcgccatgctcgccttc 747
>emb|AJ308530.2|RSP308530 Rhodomonas sp. CS24 lhcc1 gene (partial), lhcc2 gene, ORF1, lhcc3 gene and lhcc4 gene Length = 12446 Score = 50.1 bits (25), Expect = 0.002 Identities = 33/36 (91%) Strand = Plus / Plus Query: 90 gagatcaagaacggccgtctngccatgctcgccttc 125 ||||||||||||||||| || |||||| |||||||| Sbjct: 9090 gagatcaagaacggccgcctcgccatgatcgccttc 9125 Score = 46.1 bits (23), Expect = 0.025 Identities = 31/34 (91%) Strand = Plus / Minus Query: 89 ggagatcaagaacggccgtctngccatgctcgcc 122 |||||||||||||||||| || |||||| ||||| Sbjct: 6826 ggagatcaagaacggccgccttgccatgatcgcc 6793 Score = 46.1 bits (23), Expect = 0.025 Identities = 31/34 (91%) Strand = Plus / Plus Query: 89 ggagatcaagaacggccgtctngccatgctcgcc 122 |||||||||||||||||| || |||||| ||||| Sbjct: 1201 ggagatcaagaacggccgccttgccatgatcgcc 1234
>gb|AY954735.1| Ostreococcus tauri chloroplast light-harvesting complex I protein precursor Lhca3 gene, complete cds; nuclear gene for chloroplast product Length = 1113 Score = 48.1 bits (24), Expect = 0.006 Identities = 29/31 (93%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatg 116 ||||||||||||||||||||| || |||||| Sbjct: 942 caaggagatcaagaacggccgcctcgccatg 972
>gb|AY954734.1| Ostreococcus tauri chloroplast light-harvesting complex I protein precursor Lhca2 gene, complete cds; nuclear gene for chloroplast product Length = 729 Score = 48.1 bits (24), Expect = 0.006 Identities = 30/32 (93%) Strand = Plus / Plus Query: 72 aaggagctcaagctcaaggagatcaagaacgg 103 |||||||||||||| |||||||| |||||||| Sbjct: 565 aaggagctcaagctgaaggagattaagaacgg 596
>emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding protein Length = 1664 Score = 48.1 bits (24), Expect = 0.006 Identities = 38/43 (88%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||||||| | ||| |||||||||||||||| || |||||| Sbjct: 1070 ggagctcaaggtgaagaagatcaagaacggccgcctcgccatg 1112
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.006 Identities = 24/24 (100%) Strand = Plus / Plus Query: 80 caagctcaaggagatcaagaacgg 103 |||||||||||||||||||||||| Sbjct: 12296327 caagctcaaggagatcaagaacgg 12296350
>dbj|AP003511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0578B12 Length = 151192 Score = 48.1 bits (24), Expect = 0.006 Identities = 24/24 (100%) Strand = Plus / Plus Query: 80 caagctcaaggagatcaagaacgg 103 |||||||||||||||||||||||| Sbjct: 12787 caagctcaaggagatcaagaacgg 12810
>dbj|AB122116.1| Chlamydomonas reinhardtii LhcI-3 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1830 Score = 48.1 bits (24), Expect = 0.006 Identities = 29/31 (93%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatg 116 ||||||||||||||||||||| || |||||| Sbjct: 1241 caaggagatcaagaacggccgcctggccatg 1271
>emb|X63197.1|HVLHBC H.vulgare lhbC mRNA for type III LHCII CAB precursor protein Length = 928 Score = 48.1 bits (24), Expect = 0.006 Identities = 38/43 (88%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||| ||| | |||||||||||||| |||||||| |||||| Sbjct: 660 ggagcttaaggtgaaggagatcaagaatggccgtcttgccatg 702
>dbj|AK098864.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A03, full insert sequence Length = 1046 Score = 48.1 bits (24), Expect = 0.006 Identities = 24/24 (100%) Strand = Plus / Plus Query: 80 caagctcaaggagatcaagaacgg 103 |||||||||||||||||||||||| Sbjct: 637 caagctcaaggagatcaagaacgg 660
>dbj|AK060904.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E07, full insert sequence Length = 1051 Score = 48.1 bits (24), Expect = 0.006 Identities = 24/24 (100%) Strand = Plus / Plus Query: 80 caagctcaaggagatcaagaacgg 103 |||||||||||||||||||||||| Sbjct: 642 caagctcaaggagatcaagaacgg 665
>dbj|AK060800.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-F04, full insert sequence Length = 1958 Score = 48.1 bits (24), Expect = 0.006 Identities = 24/24 (100%) Strand = Plus / Plus Query: 80 caagctcaaggagatcaagaacgg 103 |||||||||||||||||||||||| Sbjct: 639 caagctcaaggagatcaagaacgg 662
>gb|AY105650.1| Zea mays PCO135935 mRNA sequence Length = 1366 Score = 48.1 bits (24), Expect = 0.006 Identities = 35/39 (89%) Strand = Plus / Plus Query: 78 ctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||| | |||||||||||||||||||| || |||||| Sbjct: 845 ctcaaggtgaaggagatcaagaacggccggctcgccatg 883
>emb|AM050696.1| Rhodomonas sp. CS24 lhcc5 gene for light-harvesting complex protein Lhcc5 precursor, exons 1-3 Length = 4979 Score = 48.1 bits (24), Expect = 0.006 Identities = 24/24 (100%) Strand = Plus / Plus Query: 80 caagctcaaggagatcaagaacgg 103 |||||||||||||||||||||||| Sbjct: 2388 caagctcaaggagatcaagaacgg 2411
>gb|AF079590.1|AF079590 Sorghum bicolor photosystem II type II chlorophyll a/b binding protein (CABII) mRNA, partial cds Length = 714 Score = 48.1 bits (24), Expect = 0.006 Identities = 38/43 (88%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||||||| | |||||| ||||||||||||| || |||||| Sbjct: 401 ggagctcaaggtgaaggagctcaagaacggccgcctcgccatg 443
>emb|AJ635207.1| Triticum durum ssp. durum partial mRNA for putative chlorophyll a/b binding protein (cab gene) Length = 760 Score = 48.1 bits (24), Expect = 0.006 Identities = 38/43 (88%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||||||| | |||||||||||||| ||||| || |||||| Sbjct: 619 ggagctcaaggttaaggagatcaagaatggccgcctcgccatg 661
>gb|AF094776.1|AF094776 Oryza sativa chlorophyll a/b-binding protein precursor (Cab26) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1050 Score = 48.1 bits (24), Expect = 0.006 Identities = 24/24 (100%) Strand = Plus / Plus Query: 80 caagctcaaggagatcaagaacgg 103 |||||||||||||||||||||||| Sbjct: 622 caagctcaaggagatcaagaacgg 645
>gb|U23188.1|ZMU23188 Zea mays chlorophyll a/b-binding apoprotein CP26 (Lhcb5-1) mRNA, complete cds Length = 957 Score = 48.1 bits (24), Expect = 0.006 Identities = 35/39 (89%) Strand = Plus / Plus Query: 78 ctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||| | |||||||||||||||||||| || |||||| Sbjct: 703 ctcaaggtgaaggagatcaagaacggccggctcgccatg 741
>emb|X06602.1|EGLHCPAB Euglena gracilis mRNA for light harvesting chlorophyll a/b protein Length = 681 Score = 48.1 bits (24), Expect = 0.006 Identities = 38/43 (88%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||| ||| | |||||||||||||||||||| || |||||| Sbjct: 194 ggagctgaaggtgaaggagatcaagaacggccggctggccatg 236
>gb|M10144.1|WHTCAB Wheat major chlorophyll a/b-binding protein gene, complete cds Length = 1191 Score = 48.1 bits (24), Expect = 0.006 Identities = 38/43 (88%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||||||| | |||||||||||||| ||||| || |||||| Sbjct: 824 ggagctcaaggttaaggagatcaagaatggccgcctcgccatg 866
>gb|M23531.1|DUNCBP D.salina major chlorophyll binding protein mRNA, complete cds Length = 1240 Score = 48.1 bits (24), Expect = 0.006 Identities = 30/32 (93%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccg 106 ||||| ||| |||||||||||||||||||||| Sbjct: 819 gagctgaaggtcaaggagatcaagaacggccg 850
>dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRNA for type I light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 1022 Score = 48.1 bits (24), Expect = 0.006 Identities = 38/43 (88%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||||||| | |||||||||||||| ||||| || |||||| Sbjct: 659 ggagctcaaggtgaaggagatcaagaaaggccgcctcgccatg 701
>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete sequence Length = 139771 Score = 46.1 bits (23), Expect = 0.025 Identities = 37/42 (88%) Strand = Plus / Minus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||| ||||||||||||| || |||||| Sbjct: 79148 gagctcaaggtgaaggagctcaagaacggccgcctcgccatg 79107
>gb|AY171229.1| Chlamydomonas reinhardtii light-harvesting complex II protein (Lhcb) mRNA, complete cds; nuclear gene for chloroplast product Length = 1024 Score = 46.1 bits (23), Expect = 0.025 Identities = 28/30 (93%) Strand = Plus / Plus Query: 87 aaggagatcaagaacggccgtctngccatg 116 |||||||||||||||||||| || |||||| Sbjct: 630 aaggagatcaagaacggccgcctggccatg 659
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.025 Identities = 37/42 (88%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||| ||||||||||||| || |||||| Sbjct: 21808668 gagctcaaggtgaaggagctcaagaacggccgcctcgccatg 21808709
>gb|AF104631.3| Chlamydomonas reinhardtii light harvesting complex II protein precursor (Lhcb3) mRNA, complete cds Length = 1314 Score = 46.1 bits (23), Expect = 0.025 Identities = 28/30 (93%) Strand = Plus / Plus Query: 87 aaggagatcaagaacggccgtctngccatg 116 |||||||||||||||||||| || |||||| Sbjct: 682 aaggagatcaagaacggccgcctggccatg 711
>gb|AY267623.1| Bigelowiella natans chlorophyll a/b-binding protein II 1 mRNA, complete cds; nuclear gene for plastid product Length = 1284 Score = 46.1 bits (23), Expect = 0.025 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 aaggagatcaagaacggccgtct 109 ||||||||||||||||||||||| Sbjct: 884 aaggagatcaagaacggccgtct 906
>gb|AY124024.1| Griffithsia japonica light-harvesting complex I polypeptide mRNA, partial cds Length = 540 Score = 46.1 bits (23), Expect = 0.025 Identities = 34/38 (89%) Strand = Plus / Plus Query: 78 ctcaagctcaaggagatcaagaacggccgtctngccat 115 |||||||||||||| | |||||||||||||| ||||| Sbjct: 391 ctcaagctcaaggaagtgaagaacggccgtctcgccat 428
>gb|AF495473.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m1 gene, complete cds; nuclear gene for chloroplast product Length = 1934 Score = 46.1 bits (23), Expect = 0.025 Identities = 28/30 (93%) Strand = Plus / Plus Query: 87 aaggagatcaagaacggccgtctngccatg 116 |||||||||||||||||||| || |||||| Sbjct: 1338 aaggagatcaagaacggccgcctggccatg 1367
>gb|AF479779.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m7 (Lhcbm7) mRNA, complete cds Length = 1016 Score = 46.1 bits (23), Expect = 0.025 Identities = 28/30 (93%) Strand = Plus / Plus Query: 87 aaggagatcaagaacggccgtctngccatg 116 |||||||||||||||||||| || |||||| Sbjct: 627 aaggagatcaagaacggccgcctggccatg 656
>gb|AF479778.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m9 (Lhcbm9) mRNA, complete cds Length = 1221 Score = 46.1 bits (23), Expect = 0.025 Identities = 28/30 (93%) Strand = Plus / Plus Query: 87 aaggagatcaagaacggccgtctngccatg 116 |||||||||||||||||||| || |||||| Sbjct: 629 aaggagatcaagaacggccgcctggccatg 658
>gb|AF479777.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m10 (Lhcbm10) mRNA, complete cds Length = 1077 Score = 46.1 bits (23), Expect = 0.025 Identities = 28/30 (93%) Strand = Plus / Plus Query: 87 aaggagatcaagaacggccgtctngccatg 116 |||||||||||||||||||| || |||||| Sbjct: 628 aaggagatcaagaacggccgcctggccatg 657
>gb|DQ122900.1| Chlamydomonas incerta chloroplast light-harvesting chlorophyll-a/b binding protein (LhcII-1.3) mRNA, complete cds; nuclear gene for chloroplast product Length = 1100 Score = 46.1 bits (23), Expect = 0.025 Identities = 28/30 (93%) Strand = Plus / Plus Query: 87 aaggagatcaagaacggccgtctngccatg 116 |||||||||||||||||||| || |||||| Sbjct: 622 aaggagatcaagaacggccgcctggccatg 651
>gb|AF268321.1|AF268321 Chlorarachnion CCMP621 light-harvesting complex protein LHCG12 mRNA, complete cds Length = 1170 Score = 46.1 bits (23), Expect = 0.025 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 aaggagatcaagaacggccgtct 109 ||||||||||||||||||||||| Sbjct: 882 aaggagatcaagaacggccgtct 904
>gb|AF268320.1|AF268320 Chlorarachnion CCMP621 light-harvesting complex protein LHCG11 mRNA, complete cds Length = 1128 Score = 46.1 bits (23), Expect = 0.025 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 aaggagatcaagaacggccgtct 109 ||||||||||||||||||||||| Sbjct: 839 aaggagatcaagaacggccgtct 861
>gb|AF268319.1|AF268319 Chlorarachnion CCMP621 light-harvesting complex protein LHCG4 mRNA, complete cds Length = 1191 Score = 46.1 bits (23), Expect = 0.025 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 aaggagatcaagaacggccgtct 109 ||||||||||||||||||||||| Sbjct: 879 aaggagatcaagaacggccgtct 901
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.025 Identities = 37/42 (88%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||| ||||||||||||| || |||||| Sbjct: 21801697 gagctcaaggtgaaggagctcaagaacggccgcctcgccatg 21801738
>gb|AY826903.1| Heterocapsa triquetra clone HTLHC7141 chloroplast light harvesting complex protein mRNA, partial cds; nuclear gene for chloroplast product Length = 800 Score = 46.1 bits (23), Expect = 0.025 Identities = 28/30 (93%) Strand = Plus / Plus Query: 96 aagaacggccgtctngccatgctcgccttc 125 |||||||||||||| |||||| |||||||| Sbjct: 752 aagaacggccgtctggccatggtcgccttc 781
>gb|AF195794.1|AF195794 Chlamydomonas reinhardtii chlorophyll A-B binding protein of LHCI (CAB6A) mRNA, complete cds Length = 1136 Score = 46.1 bits (23), Expect = 0.025 Identities = 37/42 (88%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||| ||||| ||||||||||||||||| || || |||||| Sbjct: 555 gagctgaagctgaaggagatcaagaacgggcgcctggccatg 596
>emb|AJ538464.1|NTA538464 Nicotiana tabacum cDNA-AFLP-fragment BC2-M14-017 Length = 330 Score = 46.1 bits (23), Expect = 0.025 Identities = 37/42 (88%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||||||||||||||| | || |||||| Sbjct: 201 gagctcaaggtaaaggagatcaagaacggcagacttgccatg 242
>emb|AJ234428.1|HVU234428 Hordeum vulgare partial mRNA; clone cMWG0701.rev Length = 326 Score = 46.1 bits (23), Expect = 0.025 Identities = 32/35 (91%) Strand = Plus / Minus Query: 75 gagctcaagctcaaggagatcaagaacggccgtct 109 ||||||||| | ||||||||||||||||| ||||| Sbjct: 122 gagctcaaggtgaaggagatcaagaacggtcgtct 88
>emb|X68682.1|ZMLHCB Z.mays mRNA for type II light-harvesting chlorophyll a/b-binding protein Length = 1126 Score = 46.1 bits (23), Expect = 0.025 Identities = 37/42 (88%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||| ||||||||||||| || |||||| Sbjct: 652 gagctcaaggtgaaggagctcaagaacggccgccttgccatg 693
>emb|X14794.1|ZMCAB1 Maize cab-1 gene for chlorophyll a/b-binding protein Length = 2100 Score = 46.1 bits (23), Expect = 0.025 Identities = 37/42 (88%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||| ||||||||||||| || |||||| Sbjct: 1504 gagctcaaggtgaaggagctcaagaacggccgcctcgccatg 1545
>emb|X12735.1|HVCAB2 Barley Cab-2 gene for major light-harvesting chlorophyll a/b- binding protein ( LHCP ) Length = 1030 Score = 46.1 bits (23), Expect = 0.025 Identities = 37/42 (88%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||| ||| ||||||||||||||||||| || || |||||| Sbjct: 799 gagctgaaggtcaaggagatcaagaacggacgcctggccatg 840
>dbj|AK066762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075I09, full insert sequence Length = 1106 Score = 46.1 bits (23), Expect = 0.025 Identities = 37/42 (88%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||| ||||||||||||| || |||||| Sbjct: 667 gagctcaaggtgaaggagctcaagaacggccgcctcgccatg 708
>gb|AY112240.1| Zea mays CL187_6 mRNA sequence Length = 770 Score = 46.1 bits (23), Expect = 0.025 Identities = 37/42 (88%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||| ||||||||||||| || |||||| Sbjct: 300 gagctcaaggtgaaggagctcaagaacggccgccttgccatg 341
>dbj|AK058315.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A06, full insert sequence Length = 685 Score = 46.1 bits (23), Expect = 0.025 Identities = 37/42 (88%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||| ||||||||||||| || |||||| Sbjct: 242 gagctcaaggtgaaggagctcaagaacggccgcctcgccatg 283
>gb|AY847687.1| Dunaliella salina chloroplast chlorophyll a-b binding protein mRNA, partial cds; nuclear gene for chloroplast product Length = 653 Score = 46.1 bits (23), Expect = 0.025 Identities = 40/46 (86%) Strand = Plus / Plus Query: 82 agctcaaggagatcaagaacggccgtctngccatgctcgccttcct 127 |||| |||||| | ||||||||||| || |||||||| |||||||| Sbjct: 506 agctgaaggagctgaagaacggccgcctggccatgcttgccttcct 551
>gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding protein (RCABP89) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 46.1 bits (23), Expect = 0.025 Identities = 37/42 (88%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||| ||||||||||||| || |||||| Sbjct: 656 gagctcaaggtgaaggagctcaagaacggccgcctcgccatg 697
>gb|AF017998.1|AF017998 Tetraselmis sp. RG-15 chlorophyll a/b binding protein (LHCPII) gene, complete cds Length = 2095 Score = 46.1 bits (23), Expect = 0.025 Identities = 32/35 (91%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtct 109 ||||||||| | ||||||||||||||||| ||||| Sbjct: 1570 gagctcaaggtgaaggagatcaagaacgggcgtct 1604
>gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor (Wcab) mRNA, complete cds Length = 918 Score = 46.1 bits (23), Expect = 0.025 Identities = 37/42 (88%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | ||||||||||||||||| || || |||||| Sbjct: 634 gagctcaaggtgaaggagatcaagaacggtcgccttgccatg 675
>gb|L29644.1|EGRLHCPII Euglena gracilis chlorophyll a/b binding protein (LHCPII) gene exons 1-5, 5' end Length = 3122 Score = 46.1 bits (23), Expect = 0.025 Identities = 37/42 (88%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||| | |||||||||||||| |||||| Sbjct: 2868 gagctcaaggtgaaggaggtgaagaacggccgtctggccatg 2909
>gb|M21397.1|TOBCABA Tobacco chlorophyll a/b-binding protein (Cab-C) gene, complete cds Length = 1240 Score = 46.1 bits (23), Expect = 0.025 Identities = 37/42 (88%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||||||||||||||| | || |||||| Sbjct: 1064 gagctcaaggtaaaggagatcaagaacggcagacttgccatg 1105
>dbj|AU066541.1| Chlamydomonas sp. HS-5 mRNA for hypothetical protein, NaCl+paraquat inducible, partial cds, clone:M27 Length = 687 Score = 46.1 bits (23), Expect = 0.025 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 aaggagatcaagaacggccgtct 109 ||||||||||||||||||||||| Sbjct: 605 aaggagatcaagaacggccgtct 627
>dbj|AB051210.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 988 Score = 46.1 bits (23), Expect = 0.025 Identities = 28/30 (93%) Strand = Plus / Plus Query: 87 aaggagatcaagaacggccgtctngccatg 116 |||||||||||||||||||| || |||||| Sbjct: 614 aaggagatcaagaacggccgcctggccatg 643
>dbj|AB051208.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-1.3, complete cds Length = 1107 Score = 46.1 bits (23), Expect = 0.025 Identities = 28/30 (93%) Strand = Plus / Plus Query: 87 aaggagatcaagaacggccgtctngccatg 116 |||||||||||||||||||| || |||||| Sbjct: 656 aaggagatcaagaacggccgcctggccatg 685
>dbj|AB051206.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 1781 Score = 46.1 bits (23), Expect = 0.025 Identities = 28/30 (93%) Strand = Plus / Plus Query: 87 aaggagatcaagaacggccgtctngccatg 116 |||||||||||||||||||| || |||||| Sbjct: 1251 aaggagatcaagaacggccgcctggccatg 1280
>dbj|AB051204.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-1.3, complete cds Length = 1835 Score = 46.1 bits (23), Expect = 0.025 Identities = 28/30 (93%) Strand = Plus / Plus Query: 87 aaggagatcaagaacggccgtctngccatg 116 |||||||||||||||||||| || |||||| Sbjct: 1498 aaggagatcaagaacggccgcctggccatg 1527
>dbj|D00642.1|RICLHCP2 Oryza sativa (japonica cultivar-group) mRNA for type II light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 989 Score = 46.1 bits (23), Expect = 0.025 Identities = 37/42 (88%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||| ||||||||||||| || |||||| Sbjct: 648 gagctcaaggtgaaggagctcaagaacggccgcctcgccatg 689
>gb|AF517881.1| Griffithsia japonica isolate Gj513 light-harvest protein mRNA, complete cds Length = 828 Score = 44.1 bits (22), Expect = 0.097 Identities = 25/26 (96%) Strand = Plus / Plus Query: 81 aagctcaaggagatcaagaacggccg 106 ||||||||||| |||||||||||||| Sbjct: 575 aagctcaaggaaatcaagaacggccg 600
>gb|AF517871.1| Griffithsia japonica isolate Gj152 light-harvest protein mRNA, complete cds Length = 817 Score = 44.1 bits (22), Expect = 0.097 Identities = 25/26 (96%) Strand = Plus / Plus Query: 81 aagctcaaggagatcaagaacggccg 106 ||||||||||| |||||||||||||| Sbjct: 568 aagctcaaggaaatcaagaacggccg 593
>gb|AF245690.1|AF245690 Streptomyces verticillus putative N-acetyl-glucosamine transferase gene, partial cds; and putative N-acetyl-glucosamine 2-epimerase and hypothetical protein genes, complete cds Length = 5222 Score = 44.1 bits (22), Expect = 0.097 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gcgaccccgcctaccccggcgg 22 |||||||||||||||||||||| Sbjct: 3380 gcgaccccgcctaccccggcgg 3401
>dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1611_C08 Length = 135386 Score = 44.1 bits (22), Expect = 0.097 Identities = 22/22 (100%) Strand = Plus / Plus Query: 76 agctcaagctcaaggagatcaa 97 |||||||||||||||||||||| Sbjct: 28514 agctcaagctcaaggagatcaa 28535
>dbj|AP004058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1353_F08 Length = 101988 Score = 44.1 bits (22), Expect = 0.097 Identities = 22/22 (100%) Strand = Plus / Plus Query: 76 agctcaagctcaaggagatcaa 97 |||||||||||||||||||||| Sbjct: 98116 agctcaagctcaaggagatcaa 98137
>ref|XM_320375.2| Anopheles gambiae str. PEST ENSANGP00000009150 (ENSANGG00000006860), partial mRNA Length = 6162 Score = 44.1 bits (22), Expect = 0.097 Identities = 28/30 (93%) Strand = Plus / Plus Query: 68 gatgaaggagctcaagctcaaggagatcaa 97 ||||||||||||||||| ||||| |||||| Sbjct: 4035 gatgaaggagctcaagcacaaggtgatcaa 4064
>emb|AM050697.1| Rhodomonas sp. CS24 lhcc6 gene for light-harvesting complex protein Lhcc6 precursor, exons 1-3 Length = 1602 Score = 44.1 bits (22), Expect = 0.097 Identities = 36/41 (87%) Strand = Plus / Plus Query: 82 agctcaaggagatcaagaacggccgtctngccatgctcgcc 122 ||||||||||| |||| |||||||| || |||||| ||||| Sbjct: 1123 agctcaaggagctcaacaacggccgccttgccatgatcgcc 1163
>gb|AF010321.1|AF010321 Oryza sativa photosystem I antenna protein (Lhca) mRNA, complete cds Length = 1066 Score = 44.1 bits (22), Expect = 0.097 Identities = 33/37 (89%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgcc 122 |||||||||||||||||| || | |||||||||||| Sbjct: 645 caaggagatcaagaacgggcgggtcgccatgctcgcc 681
>gb|M30620.1|TOMCBPE2 Tomato chlorophyll a/b-binding protein Cab-3A gene, 3' end Length = 351 Score = 44.1 bits (22), Expect = 0.097 Identities = 28/30 (93%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggc 104 ||||||||| | |||||||||||||||||| Sbjct: 175 gagctcaaggtaaaggagatcaagaacggc 204
>ref|NM_103597.2| Arabidopsis thaliana LHCA5 AT1G45474 (LHCA5) transcript variant AT1G45474.1 mRNA, complete cds Length = 888 Score = 42.1 bits (21), Expect = 0.38 Identities = 27/29 (93%) Strand = Plus / Plus Query: 81 aagctcaaggagatcaagaacggccgtct 109 ||||| ||||||||||||||||| ||||| Sbjct: 634 aagcttaaggagatcaagaacggtcgtct 662
>ref|NM_179447.1| Arabidopsis thaliana LHCA5 AT1G45474 (LHCA5) transcript variant AT1G45474.2 mRNA, complete cds Length = 928 Score = 42.1 bits (21), Expect = 0.38 Identities = 27/29 (93%) Strand = Plus / Plus Query: 81 aagctcaaggagatcaagaacggccgtct 109 ||||| ||||||||||||||||| ||||| Sbjct: 658 aagcttaaggagatcaagaacggtcgtct 686
>gb|AY786530.1| Haematococcus pluvialis chloroplast major light-harvesting complex II protein m9 mRNA, partial cds; nuclear gene for chloroplast product Length = 577 Score = 42.1 bits (21), Expect = 0.38 Identities = 27/29 (93%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacgg 103 ||||| ||| ||||||||||||||||||| Sbjct: 287 gagctgaaggtcaaggagatcaagaacgg 315
>ref|XM_507368.1| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1156 Score = 42.1 bits (21), Expect = 0.38 Identities = 35/40 (87%) Strand = Plus / Plus Query: 89 ggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||| ||| ||| || |||||| ||||||||||| Sbjct: 764 ggagatcaagcacgcccgcctcgccatggtcgccttcctc 803
>ref|XM_478692.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1152 Score = 42.1 bits (21), Expect = 0.38 Identities = 35/40 (87%) Strand = Plus / Plus Query: 89 ggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||| ||| ||| || |||||| ||||||||||| Sbjct: 759 ggagatcaagcacgcccgcctcgccatggtcgccttcctc 798
>ref|XM_507367.1| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1162 Score = 42.1 bits (21), Expect = 0.38 Identities = 35/40 (87%) Strand = Plus / Plus Query: 89 ggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||| ||| ||| || |||||| ||||||||||| Sbjct: 766 ggagatcaagcacgcccgcctcgccatggtcgccttcctc 805
>ref|XM_507366.1| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1183 Score = 42.1 bits (21), Expect = 0.38 Identities = 35/40 (87%) Strand = Plus / Plus Query: 89 ggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||| ||| ||| || |||||| ||||||||||| Sbjct: 766 ggagatcaagcacgcccgcctcgccatggtcgccttcctc 805
>ref|XM_506405.2| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1221 Score = 42.1 bits (21), Expect = 0.38 Identities = 35/40 (87%) Strand = Plus / Plus Query: 89 ggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||| ||| ||| || |||||| ||||||||||| Sbjct: 780 ggagatcaagcacgcccgcctcgccatggtcgccttcctc 819
>gb|BT014208.1| Lycopersicon esculentum clone 133385R, mRNA sequence Length = 958 Score = 42.1 bits (21), Expect = 0.38 Identities = 27/29 (93%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacgg 103 ||||||||| | ||||||||||||||||| Sbjct: 666 gagctcaaggtaaaggagatcaagaacgg 694
>gb|AY090263.1| Arabidopsis thaliana At1g45474/F2G19.4 mRNA, complete cds Length = 771 Score = 42.1 bits (21), Expect = 0.38 Identities = 27/29 (93%) Strand = Plus / Plus Query: 81 aagctcaaggagatcaagaacggccgtct 109 ||||| ||||||||||||||||| ||||| Sbjct: 607 aagcttaaggagatcaagaacggtcgtct 635
>gb|AF244524.1| Chlamydomonas reinhardtii chlorophyll a/b-binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1413 Score = 42.1 bits (21), Expect = 0.38 Identities = 35/40 (87%) Strand = Plus / Plus Query: 86 caaggagatcaagaacggccgtctngccatgctcgccttc 125 ||||||| ||||||||||||| || |||||| | |||||| Sbjct: 496 caaggaggtcaagaacggccgcctggccatggttgccttc 535
>gb|AY062097.1| Arabidopsis thaliana At1g45474/F2G19.4 mRNA, complete cds Length = 866 Score = 42.1 bits (21), Expect = 0.38 Identities = 27/29 (93%) Strand = Plus / Plus Query: 81 aagctcaaggagatcaagaacggccgtct 109 ||||| ||||||||||||||||| ||||| Sbjct: 612 aagcttaaggagatcaagaacggtcgtct 640
>dbj|AK221694.1| Arabidopsis thaliana mRNA for light-harvesting complex protein, complete cds, clone: RAFL15-25-F20 Length = 896 Score = 42.1 bits (21), Expect = 0.38 Identities = 27/29 (93%) Strand = Plus / Plus Query: 81 aagctcaaggagatcaagaacggccgtct 109 ||||| ||||||||||||||||| ||||| Sbjct: 636 aagcttaaggagatcaagaacggtcgtct 664
>gb|AY088144.1| Arabidopsis thaliana clone 41745 mRNA, complete sequence Length = 884 Score = 42.1 bits (21), Expect = 0.38 Identities = 27/29 (93%) Strand = Plus / Plus Query: 81 aagctcaaggagatcaagaacggccgtct 109 ||||| ||||||||||||||||| ||||| Sbjct: 635 aagcttaaggagatcaagaacggtcgtct 663
>gb|AF134121.1| Arabidopsis thaliana Lhca5 protein (Lhca5) mRNA, complete cds Length = 955 Score = 42.1 bits (21), Expect = 0.38 Identities = 27/29 (93%) Strand = Plus / Plus Query: 81 aagctcaaggagatcaagaacggccgtct 109 ||||| ||||||||||||||||| ||||| Sbjct: 669 aagcttaaggagatcaagaacggtcgtct 697
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 42.1 bits (21), Expect = 0.38 Identities = 35/40 (87%) Strand = Plus / Minus Query: 89 ggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||| ||| ||| || |||||| ||||||||||| Sbjct: 68451 ggagatcaagcacgcccgcctcgccatggtcgccttcctc 68412
>dbj|AK119534.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-B02, full insert sequence Length = 1234 Score = 42.1 bits (21), Expect = 0.38 Identities = 35/40 (87%) Strand = Plus / Plus Query: 89 ggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||| ||| ||| || |||||| ||||||||||| Sbjct: 766 ggagatcaagcacgcccgcctcgccatggtcgccttcctc 805
>emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for core chlorophyll a/b binding (CAB) protein of photosystem II (PSII) Length = 2689 Score = 42.1 bits (21), Expect = 0.38 Identities = 35/40 (87%) Strand = Plus / Plus Query: 77 gctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||| | ||||||||||||||||| || || |||||| Sbjct: 2063 gctcaaggtgaaggagatcaagaacggacggctggccatg 2102
>emb|AJ006296.1|HVU6296 Hordeum vulgare partial mRNA for chlorophyll a/b-binding protein Length = 470 Score = 42.1 bits (21), Expect = 0.38 Identities = 35/40 (87%) Strand = Plus / Plus Query: 89 ggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||| ||| ||| || |||||| ||||||||||| Sbjct: 80 ggagatcaagcacgcccgcctcgccatggtcgccttcctc 119
>dbj|AK104619.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-F11, full insert sequence Length = 1152 Score = 42.1 bits (21), Expect = 0.38 Identities = 35/40 (87%) Strand = Plus / Plus Query: 89 ggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||| ||| ||| || |||||| ||||||||||| Sbjct: 759 ggagatcaagcacgcccgcctcgccatggtcgccttcctc 798
>dbj|AK104309.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D03, full insert sequence Length = 1169 Score = 42.1 bits (21), Expect = 0.38 Identities = 35/40 (87%) Strand = Plus / Plus Query: 89 ggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||| ||| ||| || |||||| ||||||||||| Sbjct: 773 ggagatcaagcacgcccgcctcgccatggtcgccttcctc 812
>dbj|AK103924.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-C12, full insert sequence Length = 1183 Score = 42.1 bits (21), Expect = 0.38 Identities = 35/40 (87%) Strand = Plus / Plus Query: 89 ggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||| ||| ||| || |||||| ||||||||||| Sbjct: 766 ggagatcaagcacgcccgcctcgccatggtcgccttcctc 805
>dbj|AK098992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098H13, full insert sequence Length = 1156 Score = 42.1 bits (21), Expect = 0.38 Identities = 35/40 (87%) Strand = Plus / Plus Query: 89 ggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||| ||| ||| || |||||| ||||||||||| Sbjct: 764 ggagatcaagcacgcccgcctcgccatggtcgccttcctc 803
>dbj|AK058293.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-F01, full insert sequence Length = 1221 Score = 42.1 bits (21), Expect = 0.38 Identities = 35/40 (87%) Strand = Plus / Plus Query: 89 ggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||| ||| ||| || |||||| ||||||||||| Sbjct: 780 ggagatcaagcacgcccgcctcgccatggtcgccttcctc 819
>gb|AY554168.1| Nicotiana tabacum chloroplast chlorophyll a-b binding protein mRNA, partial cds; nuclear gene for chloroplast product Length = 600 Score = 42.1 bits (21), Expect = 0.38 Identities = 27/29 (93%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacgg 103 ||||||||| | ||||||||||||||||| Sbjct: 424 gagctcaaggtgaaggagatcaagaacgg 452
>gb|AY855171.1| Eleusine coracana subsp. coracana clone 1 light harvesting protein mRNA, partial cds Length = 364 Score = 42.1 bits (21), Expect = 0.38 Identities = 35/40 (87%) Strand = Plus / Plus Query: 77 gctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||| | |||||||||||||||||| | || |||||| Sbjct: 12 gctcaaggtgaaggagatcaagaacggcaggctggccatg 51
>gb|AF058796.1|AF058796 Oryza sativa chlorophyll a/b-binding protein (RCABP69) mRNA, complete cds Length = 1178 Score = 42.1 bits (21), Expect = 0.38 Identities = 35/40 (87%) Strand = Plus / Plus Query: 89 ggagatcaagaacggccgtctngccatgctcgccttcctc 128 |||||||||| ||| ||| || |||||| ||||||||||| Sbjct: 764 ggagatcaagcacgcccgcctcgccatggtcgccttcctc 803
>gb|AF003128.1|AF003128 Mesembryanthemum crystallinum chlorophyll a/b-binding protein (CAB2) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 42.1 bits (21), Expect = 0.38 Identities = 27/29 (93%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacgg 103 ||||||||| | ||||||||||||||||| Sbjct: 640 gagctcaaggtgaaggagatcaagaacgg 668
>gb|U21113.1|STU21113 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-4) gene, nuclear gene encoding chloroplast protein, complete cds Length = 798 Score = 42.1 bits (21), Expect = 0.38 Identities = 27/29 (93%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacgg 103 ||||||||| | ||||||||||||||||| Sbjct: 622 gagctcaaggtaaaggagatcaagaacgg 650
>gb|U23189.1|ZMU23189 Zea mays chlorophyll a/b-binding apoprotein CP26 (Lhcb5-2) mRNA, complete cds Length = 1073 Score = 42.1 bits (21), Expect = 0.38 Identities = 27/29 (93%) Strand = Plus / Plus Query: 78 ctcaagctcaaggagatcaagaacggccg 106 |||||| | |||||||||||||||||||| Sbjct: 701 ctcaaggtgaaggagatcaagaacggccg 729
>gb|M30618.1|TOMCBPD2 Tomato chlorophyll a/b-binding protein Cab-1C gene, 3' end Length = 351 Score = 42.1 bits (21), Expect = 0.38 Identities = 27/29 (93%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacgg 103 ||||||||| | ||||||||||||||||| Sbjct: 175 gagctcaaggtaaaggagatcaagaacgg 203
>gb|M14443.1|TOMCBPA Tomato chlorophyll a/b-binding protein gene Cab-1B, complete cds Length = 1253 Score = 42.1 bits (21), Expect = 0.38 Identities = 27/29 (93%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacgg 103 ||||||||| | ||||||||||||||||| Sbjct: 812 gagctcaaggtaaaggagatcaagaacgg 840
>emb|X54090.1|GHCAB G.hirsutum cab gene for chlorophyll ab binding protein Length = 1746 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 aaggagatcaagaacggccg 106 |||||||||||||||||||| Sbjct: 1177 aaggagatcaagaacggccg 1196
>emb|X61361.1|EGLHCAB E.gracilis gene for light harvesting chlorophyll a/b binding protein of photosystem II Length = 7650 Score = 40.1 bits (20), Expect = 1.5 Identities = 37/43 (86%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||| ||| | |||||| ||||||||||||| || |||||| Sbjct: 6958 ggagctgaaggtgaaggaggtcaagaacggccggctggccatg 7000 Score = 38.2 bits (19), Expect = 6.0 Identities = 36/42 (85%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||| | ||||||||||| || |||||| Sbjct: 4859 gagctcaaggtgaaggagctgaagaacggccgcctggccatg 4900 Score = 38.2 bits (19), Expect = 6.0 Identities = 36/42 (85%) Strand = Plus / Plus Query: 75 gagctcaagctcaaggagatcaagaacggccgtctngccatg 116 ||||||||| | |||||| | ||||||||||| || |||||| Sbjct: 1416 gagctcaaggtgaaggagctgaagaacggccgcctggccatg 1457 Score = 38.2 bits (19), Expect = 6.0 Identities = 27/30 (90%) Strand = Plus / Plus Query: 87 aaggagatcaagaacggccgtctngccatg 116 |||||| ||||||||||||| || |||||| Sbjct: 187 aaggaggtcaagaacggccggctggccatg 216
>gb|AF495472.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m6 mRNA, complete cds; nuclear gene for chloroplast product Length = 1094 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 aaggagatcaagaacggccg 106 |||||||||||||||||||| Sbjct: 637 aaggagatcaagaacggccg 656
>gb|DQ122899.1| Chlamydomonas incerta chloroplast light harvesting complex I protein (LhcA) mRNA, complete cds; nuclear gene for chloroplast product Length = 746 Score = 40.1 bits (20), Expect = 1.5 Identities = 31/35 (88%) Strand = Plus / Plus Query: 87 aaggagatcaagaacggccgtctngccatgctcgc 121 |||||| ||||||||||||| || |||||| |||| Sbjct: 571 aaggaggtcaagaacggccgcctggccatgatcgc 605
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 aaggagctcaagctcaagga 91 |||||||||||||||||||| Sbjct: 1496820 aaggagctcaagctcaagga 1496839
>gb|AF330793.1|AF330793 Chlamydomonas reinhardtii light-harvesting complex II protein precursor (cabII-2) mRNA, complete cds Length = 1068 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 aaggagatcaagaacggccg 106 |||||||||||||||||||| Sbjct: 610 aaggagatcaagaacggccg 629
>ref|XM_310694.2| Anopheles gambiae str. PEST ENSANGP00000020013 (ENSANGG00000017524), partial mRNA Length = 3918 Score = 40.1 bits (20), Expect = 1.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 gatgaaggagctcaagctcaagga 91 ||||||||||||| |||||||||| Sbjct: 2706 gatgaaggagctcgagctcaagga 2729
>gb|AY533037.1| Fusarium graminearum dsRNA mycovirus-1 strain DK-21, complete genome Length = 6624 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 ctcaagctcaaggagatcaa 97 |||||||||||||||||||| Sbjct: 6279 ctcaagctcaaggagatcaa 6298
>emb|X12860.1|EGLHCI35 Euglena gracilis mRNA fragment for LHCI protein LH35 Length = 1124 Score = 40.1 bits (20), Expect = 1.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 90 gagatcaagaacggccgtctngccatg 116 ||||||||||||||||| || |||||| Sbjct: 853 gagatcaagaacggccgactggccatg 879
>gb|M29334.1|LGILHCPABP L.gibba light-harvesting chlorophyll a/b protein gene, complete cds Length = 1633 Score = 40.1 bits (20), Expect = 1.5 Identities = 37/43 (86%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||| ||| | ||||||||||||||||| || || |||||| Sbjct: 1018 ggagctgaaggtgaaggagatcaagaacggacgcctggccatg 1060
>gb|M12152.1|LGIAB19A Lemna gibba chlorophyll a/b apoprotein gene, complete cds Length = 1913 Score = 40.1 bits (20), Expect = 1.5 Identities = 37/43 (86%) Strand = Plus / Plus Query: 74 ggagctcaagctcaaggagatcaagaacggccgtctngccatg 116 |||||| ||| | ||||||||||||||||| || || |||||| Sbjct: 1357 ggagctgaaggtgaaggagatcaagaacgggcggctggccatg 1399 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 774,890 Number of Sequences: 3902068 Number of extensions: 774890 Number of successful extensions: 54379 Number of sequences better than 10.0: 321 Number of HSP's better than 10.0 without gapping: 325 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 53370 Number of HSP's gapped (non-prelim): 1008 length of query: 128 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 107 effective length of database: 17,151,101,840 effective search space: 1835167896880 effective search space used: 1835167896880 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)