ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd27k18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PPE10_MYCTU (P42611) Hypothetical PPE-family protein PPE10 29 5.3
2TESK1_HUMAN (Q15569) Dual specificity testis-specific protein ki... 28 9.0

>PPE10_MYCTU (P42611) Hypothetical PPE-family protein PPE10|
          Length = 487

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +2

Query: 311 SAPAGGREMGNICGGAGKADVAADYRPS--SPGTS 409
           SAP GG + GN   G+G A   +   P   SPGTS
Sbjct: 397 SAPVGGLDSGNPNPGSGSAAAGSGANPGLRSPGTS 431



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>TESK1_HUMAN (Q15569) Dual specificity testis-specific protein kinase 1 (EC|
           2.7.12.1) (Testicular protein kinase 1)
          Length = 626

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 20/47 (42%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
 Frame = -2

Query: 406 RSWAGRPVVRRHVGLPRAAA---DVPHLPP-ARRRRSVGTAREGCLL 278
           + WAG P  R    LPRAAA     P  PP A R    G    GC L
Sbjct: 527 QGWAGEPWNRAQHSLPRAAALERTEPSPPPSAPREPDEGLPCPGCCL 573


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.142    0.439 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,738,936
Number of Sequences: 219361
Number of extensions: 486301
Number of successful extensions: 1322
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
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