| Clone Name | basd27i08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC083903.10| Homo sapiens BAC clone RP11-785G23 from UL, complete sequence Length = 174480 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Plus Query: 97 cttggtcttggacatcacagcc 118 |||||||||||||||||||||| Sbjct: 77995 cttggtcttggacatcacagcc 78016
>gb|AC183275.3| Pan troglodytes BAC clone CH251-16D10 from chromosome 2, complete sequence Length = 180877 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 cttggtcttggacatcacagcc 118 |||||||||||||||||||||| Sbjct: 22432 cttggtcttggacatcacagcc 22411
>gb|AC109815.5| Homo sapiens BAC clone CTD-2192H8 from 2, complete sequence Length = 165158 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 cttggtcttggacatcacagcc 118 |||||||||||||||||||||| Sbjct: 3637 cttggtcttggacatcacagcc 3616
>gb|AC108938.3| Homo sapiens BAC clone RP11-701A10 from 2, complete sequence Length = 175222 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 cttggtcttggacatcacagcc 118 |||||||||||||||||||||| Sbjct: 132701 cttggtcttggacatcacagcc 132680
>gb|AC115115.4| Homo sapiens BAC clone RP11-812M14 from 2, complete sequence Length = 124457 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 cttggtcttggacatcacagcc 118 |||||||||||||||||||||| Sbjct: 105543 cttggtcttggacatcacagcc 105522
>gb|AC111200.7| Homo sapiens BAC clone RP11-1283H4 from 2, complete sequence Length = 186752 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Plus Query: 97 cttggtcttggacatcacagcc 118 |||||||||||||||||||||| Sbjct: 175747 cttggtcttggacatcacagcc 175768
>gb|AC013271.4| Homo sapiens BAC clone RP11-385J6 from 2, complete sequence Length = 155702 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 cttggtcttggacatcacagcc 118 |||||||||||||||||||||| Sbjct: 71172 cttggtcttggacatcacagcc 71151
>gb|AC114755.4| Homo sapiens BAC clone RP11-274P16 from 2, complete sequence Length = 195403 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 cttggtcttggacatcacagcc 118 |||||||||||||||||||||| Sbjct: 137080 cttggtcttggacatcacagcc 137059
>gb|AC012487.12| Homo sapiens BAC clone RP11-85M14 from 2, complete sequence Length = 156602 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Plus Query: 97 cttggtcttggacatcacagcc 118 |||||||||||||||||||||| Sbjct: 57775 cttggtcttggacatcacagcc 57796
>gb|AC093616.5| Homo sapiens BAC clone RP13-511M20 from 2, complete sequence Length = 192494 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 cttggtcttggacatcacagcc 118 |||||||||||||||||||||| Sbjct: 105063 cttggtcttggacatcacagcc 105042
>emb|BX908778.5| Zebrafish DNA sequence from clone CH211-193E17 in linkage group 3, complete sequence Length = 138862 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 gctctgcttcttctctacttg 72 ||||||||||||||||||||| Sbjct: 51908 gctctgcttcttctctacttg 51888
>emb|CR387933.10| Zebrafish DNA sequence from clone DKEY-81L17 in linkage group 3, complete sequence Length = 182618 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 gctctgcttcttctctacttg 72 ||||||||||||||||||||| Sbjct: 125109 gctctgcttcttctctacttg 125129
>gb|AC151286.4| Mus musculus BAC clone RP23-368B8 from chromosome 17, complete sequence Length = 178835 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 tttagtggaaacataaggaaa 187 ||||||||||||||||||||| Sbjct: 61500 tttagtggaaacataaggaaa 61480
>gb|AC165087.4| Mus musculus BAC clone RP23-198K7 from chromosome 17, complete sequence Length = 211272 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 tttagtggaaacataaggaaa 187 ||||||||||||||||||||| Sbjct: 41691 tttagtggaaacataaggaaa 41711
>ref|XM_445929.1| Candida glabrata CBS138, CAGL0E05522g partial mRNA Length = 933 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 tgaatgaagaagctatgcac 241 |||||||||||||||||||| Sbjct: 824 tgaatgaagaagctatgcac 843
>emb|AL121867.13|HSA405O21 Human DNA sequence from clone RP11-405O21 on chromosome Xq21.1-21.32 Contains STSs and GSSs, complete sequence Length = 131238 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cttttatatgattgcatagt 272 |||||||||||||||||||| Sbjct: 41864 cttttatatgattgcatagt 41845
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 tgaatgaagaagctatgcac 241 |||||||||||||||||||| Sbjct: 545372 tgaatgaagaagctatgcac 545353 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,026,024 Number of Sequences: 3902068 Number of extensions: 4026024 Number of successful extensions: 98428 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98400 Number of HSP's gapped (non-prelim): 28 length of query: 324 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 302 effective length of database: 17,147,199,772 effective search space: 5178454331144 effective search space used: 5178454331144 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)