| Clone Name | basd27i01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SFR16_MOUSE (Q8CFC7) Splicing factor, arginine/serine-rich 16 (S... | 28 | 6.9 | 2 | DNJ15_ARATH (Q9ZSY2) Chaperone protein dnaJ 15 (Protein ALTERED ... | 28 | 9.0 |
|---|
>SFR16_MOUSE (Q8CFC7) Splicing factor, arginine/serine-rich 16 (Suppressor of| white-apricot homolog 2) (Clk4-associating SR-related protein) Length = 653 Score = 28.5 bits (62), Expect = 6.9 Identities = 17/40 (42%), Positives = 21/40 (52%) Frame = +3 Query: 204 SDSRSSGERNGSSLNRENGVVGEQYKRCAARRSG*VPHPR 323 S SRS G R+ +R+ G +Y R ARR G VP R Sbjct: 412 SRSRSRGRRHSDGGSRD----GHRYSRSPARRGGYVPRRR 447
>DNJ15_ARATH (Q9ZSY2) Chaperone protein dnaJ 15 (Protein ALTERED RESPONSE TO| GRAVITY) (AtARG1) (AtJ15) (AtDjB15) Length = 410 Score = 28.1 bits (61), Expect = 9.0 Identities = 15/34 (44%), Positives = 22/34 (64%) Frame = +3 Query: 153 DNLAN*NILVARGKESKSDSRSSGERNGSSLNRE 254 +NL+N + A+G ESK D S+GE G+ NR+ Sbjct: 359 NNLSNGSSSKAQGDESKGDGDSAGEEGGTE-NRD 391 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,572,405 Number of Sequences: 219361 Number of extensions: 1015965 Number of successful extensions: 2181 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2132 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2181 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)