ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd27g14 |
|---|---|
| Clone Library Name | barley_pub |
>CNC_DROME (P20482) Segmentation protein cap'n'collar| Length = 1383 Score = 35.8 bits (81), Expect = 0.066 Identities = 17/37 (45%), Positives = 22/37 (59%) Frame = -1 Query: 343 HQDPHHRHPPSYQRPLAHHHLVSLGHDSAHHHMASPA 233 H PHH HP ++ P +HHH S+ H AHH A+ A Sbjct: 589 HPHPHHGHPHAH--PHSHHH-ASMHHAHAHHAAAAAA 622
>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor| Length = 351 Score = 35.4 bits (80), Expect = 0.086 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = -1 Query: 343 HQDPHHRHPPSYQRPLAHHHLVSLGHDSAHHH 248 H++ HH H ++ P HHH + H A HH Sbjct: 145 HEEHHHHHHAAHHHPWFHHHHLGYHHHHAPHH 176 Score = 35.4 bits (80), Expect = 0.086 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 5/41 (12%) Frame = -1 Query: 349 EAHQDPHHRHPPS-----YQRPLAHHHLVSLGHDSAHHHMA 242 E H + HH H P + P HHH LGH HHH A Sbjct: 87 EPHHEEHHHHHPHPHHHHHHHPPHHHH--HLGHHHHHHHAA 125 Score = 34.3 bits (77), Expect = 0.19 Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 15/49 (30%) Frame = -1 Query: 349 EAHQDP---------------HHRHPPSYQRPLAHHHLVSLGHDSAHHH 248 E H +P HH HPP + L HHH H +AHHH Sbjct: 83 EEHHEPHHEEHHHHHPHPHHHHHHHPPHHHHHLGHHH---HHHHAAHHH 128 Score = 32.7 bits (73), Expect = 0.56 Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 4/32 (12%) Frame = -1 Query: 331 HHRHPPSYQRPLAHHH----LVSLGHDSAHHH 248 HH HPP + L HHH H HHH Sbjct: 104 HHHHPPHHHHHLGHHHHHHHAAHHHHHEEHHH 135 Score = 32.3 bits (72), Expect = 0.73 Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 2/34 (5%) Frame = -1 Query: 343 HQDPHHRHPPSYQRP--LAHHHLVSLGHDSAHHH 248 H++ HH HP + P HHH H HHH Sbjct: 74 HEEHHHHHPEEHHEPHHEEHHHHHPHPHHHHHHH 107 Score = 32.0 bits (71), Expect = 0.95 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = -1 Query: 343 HQDPHHRHPPSYQRPLAHHHLVSLGHDSAHHH 248 H D HH H + HHH HD+ HHH Sbjct: 291 HHDAHHHHHHHHDAHHHHHH-----HDAHHHH 317 Score = 31.6 bits (70), Expect = 1.2 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = -1 Query: 343 HQDPHHRHPPSYQRPLAHHHLVSLGHDSAHHH 248 H D HH H + HHH HD+ HHH Sbjct: 320 HHDAHHHHHHHHDAHHHHHH----HHDAHHHH 347 Score = 31.6 bits (70), Expect = 1.2 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = -1 Query: 343 HQDPHHRHPPSYQRPLAHHHLVSLGHDSAHHH 248 H D HH H + HHH HD+ HHH Sbjct: 310 HHDAHHHHHHHHDAHHHHHH----HHDAHHHH 337 Score = 31.6 bits (70), Expect = 1.2 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = -1 Query: 343 HQDPHHRHPPSYQRPLAHHHLVSLGHDSAHHH 248 H D HH H + HHH HD+ HHH Sbjct: 281 HHDAHHHHHHHHDAHHHHHH----HHDAHHHH 308 Score = 31.6 bits (70), Expect = 1.2 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = -1 Query: 343 HQDPHHRHPPSYQRPLAHHHLVSLGHDSAHHH 248 H D HH H + HHH HD+ HHH Sbjct: 271 HHDAHHHHHHHHDAHHHHHH----HHDAHHHH 298 Score = 31.6 bits (70), Expect = 1.2 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = -1 Query: 343 HQDPHHRHPPSYQRPLAHHHLVSLGHDSAHHH 248 H D HH H + HHH HD+ HHH Sbjct: 261 HHDAHHHHHHHHDAHHHHHH----HHDAHHHH 288 Score = 31.6 bits (70), Expect = 1.2 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = -1 Query: 343 HQDPHHRHPPSYQRPLAHHHLVSLGHDSAHHH 248 H D HH H + HHH HD+ HHH Sbjct: 251 HHDAHHHHHHHHDAHHHHHH----HHDAHHHH 278 Score = 31.2 bits (69), Expect = 1.6 Identities = 14/34 (41%), Positives = 15/34 (44%) Frame = -1 Query: 343 HQDPHHRHPPSYQRPLAHHHLVSLGHDSAHHHMA 242 H PHH H + P HHH H HHH A Sbjct: 181 HHAPHHHHH-HHHAPHHHHHHHHAPHHHHHHHHA 213 Score = 31.2 bits (69), Expect = 1.6 Identities = 14/34 (41%), Positives = 15/34 (44%) Frame = -1 Query: 343 HQDPHHRHPPSYQRPLAHHHLVSLGHDSAHHHMA 242 H PHH H + P HHH H HHH A Sbjct: 171 HHAPHHHH-HHHHAPHHHHHHHHAPHHHHHHHHA 203 Score = 30.8 bits (68), Expect = 2.1 Identities = 12/32 (37%), Positives = 14/32 (43%) Frame = -1 Query: 343 HQDPHHRHPPSYQRPLAHHHLVSLGHDSAHHH 248 H HH H + HHH HD+ HHH Sbjct: 227 HHHHHHGHHHHHHHHHGHHHHHHHHHDAHHHH 258 Score = 30.4 bits (67), Expect = 2.8 Identities = 13/32 (40%), Positives = 14/32 (43%) Frame = -1 Query: 343 HQDPHHRHPPSYQRPLAHHHLVSLGHDSAHHH 248 H PHH H + HHH GH HHH Sbjct: 201 HHAPHHHH--HHHHAPHHHHHHHHGHHHHHHH 230 Score = 30.4 bits (67), Expect = 2.8 Identities = 13/32 (40%), Positives = 14/32 (43%) Frame = -1 Query: 343 HQDPHHRHPPSYQRPLAHHHLVSLGHDSAHHH 248 H PHH H + P HHH H HHH Sbjct: 191 HHAPHHHH-HHHHAPHHHHHHHHAPHHHHHHH 221 Score = 30.4 bits (67), Expect = 2.8 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%) Frame = -1 Query: 352 QEAHQDPHHRHPPSYQRP--LAHHHLVSLGHDSAHH 251 + H++ HH HP + P HHH H HH Sbjct: 55 EHLHEEHHHHHPEEHHEPHHEEHHHHHPEEHHEPHH 90 Score = 30.0 bits (66), Expect = 3.6 Identities = 13/32 (40%), Positives = 14/32 (43%) Frame = -1 Query: 343 HQDPHHRHPPSYQRPLAHHHLVSLGHDSAHHH 248 H D HH H HHH HD+ HHH Sbjct: 301 HHDAHHHHHHHDAHHHHHHH-----HDAHHHH 327 Score = 30.0 bits (66), Expect = 3.6 Identities = 13/32 (40%), Positives = 14/32 (43%) Frame = -1 Query: 343 HQDPHHRHPPSYQRPLAHHHLVSLGHDSAHHH 248 H PHH H + HHH GH HHH Sbjct: 211 HHAPHHHH--HHHHGHHHHHHHHHGHHHHHHH 240
>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)| Length = 508 Score = 34.3 bits (77), Expect = 0.19 Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Frame = -1 Query: 343 HQDP-HHRHP-PSYQRPLAHHHLVSLGHDSAHHHMASP 236 HQ P HH HP P +Q+ HHH S H HH SP Sbjct: 294 HQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSP 331 Score = 29.6 bits (65), Expect = 4.7 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Frame = -1 Query: 334 PHHRHPPSYQRPLAH-----HHLVSLGHDSAHHHM-ASPA 233 PHH +P +Q P H HH + H +H H+ A PA Sbjct: 286 PHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPA 325
>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)| (Fragment) Length = 353 Score = 34.3 bits (77), Expect = 0.19 Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Frame = -1 Query: 343 HQDP-HHRHP-PSYQRPLAHHHLVSLGHDSAHHHMASP 236 HQ P HH HP P +Q+ HHH S H HH SP Sbjct: 139 HQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSP 176 Score = 29.6 bits (65), Expect = 4.7 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Frame = -1 Query: 334 PHHRHPPSYQRPLAH-----HHLVSLGHDSAHHHM-ASPA 233 PHH +P +Q P H HH + H +H H+ A PA Sbjct: 131 PHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPA 170
>MAFB_HUMAN (Q9Y5Q3) Transcription factor MafB (V-maf musculoaponeurotic| fibrosarcoma oncogene homolog B) Length = 323 Score = 33.1 bits (74), Expect = 0.43 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 5/62 (8%) Frame = -1 Query: 406 ALLPQKDVMEDCRAVNRIQEAHQDPHHRHP-PSYQRP---LAHHHLVSLGH-DSAHHHMA 242 AL+ V + ++ + + AH HH HP P + P +AH L H HHH A Sbjct: 110 ALIGSHPVPQPLQSFDSFRGAHHHHHHHHPHPHHAYPGAGVAHDELGPHAHPHHHHHHQA 169 Query: 241 SP 236 SP Sbjct: 170 SP 171
>SLOU_DROME (P22807) Homeobox protein slou (S59/2) (Protein slouch) (Homeobox| protein NK-1) Length = 659 Score = 32.7 bits (73), Expect = 0.56 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%) Frame = -1 Query: 343 HQDPHHRHPP---SYQRPLAHHHLVSLGHDSAHHHMASPA 233 HQ HH+HP S+Q P H H H SA H+ +P+ Sbjct: 205 HQHQHHQHPAHPHSHQHPHPHPHPHPHPHPSAVFHLRAPS 244
>ABDB_DROME (P09087) Homeobox protein abdominal-B (P3) (Infraabdominal 7)| (IAB-7) (PH189) Length = 493 Score = 32.3 bits (72), Expect = 0.73 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = -1 Query: 352 QEAHQDPHHRHPPSYQRPLAHHHLVSLGHDSAHHHMASPAL 230 Q+ H H H AHHHL H ++HHH A P L Sbjct: 24 QQQHLQQLHHH--------AHHHLPQPLHTTSHHHSAHPHL 56
>SPEN_DROME (Q8SX83) Protein split ends| Length = 5560 Score = 32.3 bits (72), Expect = 0.73 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = -1 Query: 331 HHRHPPSYQRPLAHHHLVSLGHDSAHHHMASPALL--*CCCAEGHSNQTL 188 H R P SY + H S H S+H H +SP C AEG S++T+ Sbjct: 448 HSRSPSSYS---SSHSSSSSSHSSSHSHASSPVQSSGNCAMAEGRSSRTV 494
>MAFB_RAT (P54842) Transcription factor MafB (V-maf musculoaponeurotic| fibrosarcoma oncogene homolog B) (Transcription factor MAF1) Length = 323 Score = 31.6 bits (70), Expect = 1.2 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 5/62 (8%) Frame = -1 Query: 406 ALLPQKDVMEDCRAVNRIQEAHQDPHHRHP-PSYQRP---LAHHHLVSLGH-DSAHHHMA 242 AL+ V + ++ + + AH HH HP P + P + H L H HHH A Sbjct: 110 ALIGSHPVPQPLQSFDGFRSAHHHHHHHHPHPHHGYPGAGVTHDELGPHAHPHHHHHHQA 169 Query: 241 SP 236 SP Sbjct: 170 SP 171
>MAFB_MOUSE (P54841) Transcription factor MafB (V-maf musculoaponeurotic| fibrosarcoma oncogene homolog B) (Transcription factor MAF1) (Segmentation protein KR) (Kreisler) Length = 323 Score = 31.6 bits (70), Expect = 1.2 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 5/62 (8%) Frame = -1 Query: 406 ALLPQKDVMEDCRAVNRIQEAHQDPHHRHP-PSYQRP---LAHHHLVSLGH-DSAHHHMA 242 AL+ V + ++ + + AH HH HP P + P + H L H HHH A Sbjct: 110 ALIGSHPVPQPLQSFDGFRSAHHHHHHHHPHPHHGYPGAGVTHDDLGQHAHPHHHHHHQA 169 Query: 241 SP 236 SP Sbjct: 170 SP 171
>DISC_DROME (P23792) Protein disconnected| Length = 568 Score = 31.6 bits (70), Expect = 1.2 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%) Frame = -1 Query: 361 NRIQEAHQDPHHRH-PPSYQRPLAHHHL--VSLGHDSAHHH 248 +++Q+ HQ H H S+ HHHL +GH HHH Sbjct: 507 HQLQQQHQQEQHHHLTLSHHHQEQHHHLGHHHMGHHHHHHH 547 Score = 28.9 bits (63), Expect = 8.1 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%) Frame = -1 Query: 355 IQEAHQDPHHRHPPSYQRPLAHHHLVSLGH--DSAHHHM 245 ++ HQ +H H Q HH ++L H HHH+ Sbjct: 496 LKTQHQQYNHHHQLQQQHQQEQHHHLTLSHHHQEQHHHL 534
>HYPB_BRAJA (Q45257) Hydrogenase nickel incorporation protein hypB| Length = 302 Score = 31.2 bits (69), Expect = 1.6 Identities = 15/36 (41%), Positives = 17/36 (47%) Frame = -1 Query: 355 IQEAHQDPHHRHPPSYQRPLAHHHLVSLGHDSAHHH 248 I+ AH D HH H + HH GHD HHH Sbjct: 14 IEHAH-DHHHDHGHDHDHGHDGHHHHHHGHDQDHHH 48
>ADD4_STRCO (Q9L0L6) Probable adenosine deaminase 4 (EC 3.5.4.4) (Adenosine| aminohydrolase 4) Length = 343 Score = 30.4 bits (67), Expect = 2.8 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 1/81 (1%) Frame = +1 Query: 190 GFGLSDLQRSSIIVKQEKPCDDGQNHAQVK-PNGGELVGAGSLGDADDEDPDVPPGFG*R 366 GFGLS+ +R + ++ ++ + P+GGEL G S+ D D+ G G R Sbjct: 172 GFGLSNDERRGMARDFDRAFAIARDGGLLSAPHGGELTGPASVRDCLDDLEADRIGHGVR 231 Query: 367 LCNLP*HLSVAATREKICACC 429 P L A R+ C C Sbjct: 232 AAEDPRLLKRLADRQVTCEVC 252
>OTX1_BRARE (Q91994) Homeobox protein OTX1 (ZOTX1)| Length = 323 Score = 30.0 bits (66), Expect = 3.6 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 3/48 (6%) Frame = -1 Query: 376 DCRAVNRIQEAHQDPHHRHP--PSYQRPLAHHHLV-SLGHDSAHHHMA 242 DC + +H PH P S HHH+ S GH HHH A Sbjct: 229 DCGSYLAPMHSHHHPHQLSPMTASSMPTHPHHHISQSSGHHHHHHHQA 276
>KNOB_PLAFG (P09346) Knob-associated histidine-rich protein precursor (KAHRP)| (KP) Length = 634 Score = 29.6 bits (65), Expect = 4.7 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%) Frame = -1 Query: 352 QEAHQDPHHRH--PPSYQRPLAHHHLVSLGHDSAHHH 248 Q HQ HH H ++Q P H + G D AHHH Sbjct: 76 QAPHQAHHHHHHGEVNHQAPQVHQQV--HGQDQAHHH 110
>KNOB_PLAFN (P06719) Knob-associated histidine-rich protein precursor (KAHRP)| Length = 657 Score = 29.6 bits (65), Expect = 4.7 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%) Frame = -1 Query: 352 QEAHQDPHHRH--PPSYQRPLAHHHLVSLGHDSAHHH 248 Q HQ HH H ++Q P H + G D AHHH Sbjct: 80 QAPHQAHHHHHHGEVNHQAPQVHQQV--HGQDQAHHH 114
>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2161 Score = 29.6 bits (65), Expect = 4.7 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = -1 Query: 349 EAHQDPHHRHPPSYQRP 299 E+ DPHHR PSY+RP Sbjct: 859 ESSFDPHHRAQPSYERP 875
>OTX1_HUMAN (P32242) Homeobox protein OTX1| Length = 354 Score = 29.6 bits (65), Expect = 4.7 Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 9/52 (17%) Frame = -1 Query: 376 DCRAVNRIQEAHQDPHHRHP--PS------YQRPLAHHHL-VSLGHDSAHHH 248 DC + +H PH P PS + P AHH L S GH HHH Sbjct: 247 DCSSYLAPMHSHHHPHQLSPMAPSSMAGHHHHHPHAHHPLSQSSGHHHHHHH 298
>OTX1_RAT (Q63410) Homeobox protein OTX1| Length = 355 Score = 29.6 bits (65), Expect = 4.7 Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 9/52 (17%) Frame = -1 Query: 376 DCRAVNRIQEAHQDPHHRHP--PS------YQRPLAHHHL-VSLGHDSAHHH 248 DC + +H PH P PS + P AHH L S GH HHH Sbjct: 247 DCSSYLAPMHSHHHPHQLSPMAPSSMAGHHHHHPHAHHPLSQSSGHHHHHHH 298
>OTX1_MOUSE (P80205) Homeobox protein OTX1| Length = 355 Score = 29.6 bits (65), Expect = 4.7 Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 9/52 (17%) Frame = -1 Query: 376 DCRAVNRIQEAHQDPHHRHP--PS------YQRPLAHHHL-VSLGHDSAHHH 248 DC + +H PH P PS + P AHH L S GH HHH Sbjct: 247 DCSSYLAPMHSHHHPHQLSPMAPSSMAGHHHHHPHAHHPLSQSSGHHHHHHH 298
>FOXB2_MOUSE (Q64733) Forkhead box protein B2 (Transcription factor FKH-4)| Length = 428 Score = 29.6 bits (65), Expect = 4.7 Identities = 13/36 (36%), Positives = 14/36 (38%) Frame = -1 Query: 343 HQDPHHRHPPSYQRPLAHHHLVSLGHDSAHHHMASP 236 H PHH H + HHH H HHH P Sbjct: 135 HLHPHHPHHAHHH----HHHHHHAAHHHHHHHPPQP 166
>KNOB_PLAFA (P13817) Knob-associated histidine-rich protein precursor (KAHRP)| (HRPI) (Fragment) Length = 473 Score = 29.6 bits (65), Expect = 4.7 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%) Frame = -1 Query: 352 QEAHQDPHHRH--PPSYQRPLAHHHLVSLGHDSAHHH 248 Q HQ HH H ++Q P H + G D AHHH Sbjct: 76 QAPHQAHHHHHHGEVNHQAPQVHQQV--HGQDQAHHH 110
>ADD_STRVG (P53984) Adenosine deaminase (EC 3.5.4.4) (Adenosine| aminohydrolase) Length = 339 Score = 29.3 bits (64), Expect = 6.2 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 1/81 (1%) Frame = +1 Query: 190 GFGLSDLQRSSIIVKQEKPCDDGQNHAQVK-PNGGELVGAGSLGDADDEDPDVPPGFG*R 366 GFGLS+ +R + ++ + + P+GGEL G S+ D D+ G G R Sbjct: 168 GFGLSNDERRGMARDFDRAFAIAREGGLLAAPHGGELTGPSSVRDCLDDLHASRIGHGVR 227 Query: 367 LCNLP*HLSVAATREKICACC 429 P L A R+ C C Sbjct: 228 AAEDPRLLKRLADRQITCEVC 248
>HS104_YEAST (P31539) Heat shock protein 104| Length = 908 Score = 29.3 bits (64), Expect = 6.2 Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 5/51 (9%) Frame = +1 Query: 199 LSDLQRSSIIVKQEKPCDDG-----QNHAQVKPNGGELVGAGSLGDADDED 336 + D + ++++K+ K D+ + +V PN +GA +LGD D+ED Sbjct: 849 IKDKETVNVVLKKGKSRDENVPEEAEECLEVLPNHEATIGADTLGDDDNED 899
>UREE_RALEJ (Q473Q8) Urease accessory protein ureE| Length = 221 Score = 29.3 bits (64), Expect = 6.2 Identities = 14/44 (31%), Positives = 17/44 (38%) Frame = -1 Query: 379 EDCRAVNRIQEAHQDPHHRHPPSYQRPLAHHHLVSLGHDSAHHH 248 ED A + H H H S+ +H H S HD H H Sbjct: 159 EDYAAAQAVFHEHHGHDHDHGHSHSHSHSHSHSHSHSHDHDHDH 202
>LPIN3_HUMAN (Q9BQK8) Lipin-3 (Lipin 3-like)| Length = 851 Score = 29.3 bits (64), Expect = 6.2 Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 3/106 (2%) Frame = +1 Query: 43 RIMNPEQQQD---TGPSPKKLKGNRKGEXXXXXXXXXXXXXXXEDDDPEEPPGFGLSDLQ 213 R P+Q++D T SP++L+ + E EPPG L + Sbjct: 146 RRRKPKQKEDAVATDSSPEELEAGAESELSLPEKLR------------PEPPGVQLEE-- 191 Query: 214 RSSIIVKQEKPCDDGQNHAQVKPNGGELVGAGSLGDADDEDPDVPP 351 +SS+ K P DG+ Q + GEL S + + P+ P Sbjct: 192 KSSLQPKDIYPYSDGEWPPQASLSAGELTSPKSDSELEVRTPEPSP 237
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 29.3 bits (64), Expect = 6.2 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = -1 Query: 349 EAHQDPHHRHPPSYQRP 299 E+ DPHHR PSY RP Sbjct: 867 ESSFDPHHRSQPSYDRP 883
>KE4_MOUSE (Q31125) Zinc transporter SLC39A7 (Solute carrier family 39 member| 7) (Histidine-rich membrane protein Ke4) Length = 476 Score = 28.9 bits (63), Expect = 8.1 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Frame = -1 Query: 391 KDVMEDCRAVNRIQEAHQDPHHRHPPSYQRPLAH------HHLVSLGHDSAHHHMASPAL 230 KDV ED + +H+D HH H + H H + GH +H H S Sbjct: 36 KDVEEDFHGHSH-GHSHEDFHHGHSHGHSHEDFHHGHGHTHESIWHGHAHSHDHGHSREE 94 Query: 229 L*CCCAEGHSNQTL 188 L + GHS+ +L Sbjct: 95 LHHGHSHGHSHDSL 108
>P60_LISIV (Q01837) Protein p60 precursor (Invasion-associated protein)| Length = 524 Score = 28.9 bits (63), Expect = 8.1 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%) Frame = -3 Query: 98 FSFFGEGPVSCCCSGF--IILSKTASTLPRIS 9 +S+ G GP + CSGF + +K+ TLPR S Sbjct: 424 YSWGGNGPTTFDCSGFTKYVFAKSGVTLPRTS 455
>KE4_HUMAN (Q92504) Zinc transporter SLC39A7 (Solute carrier family 39 member| 7) (Histidine-rich membrane protein Ke4) Length = 469 Score = 28.9 bits (63), Expect = 8.1 Identities = 12/33 (36%), Positives = 15/33 (45%) Frame = -1 Query: 346 AHQDPHHRHPPSYQRPLAHHHLVSLGHDSAHHH 248 +H+D HH H Y +H GHD H H Sbjct: 84 SHEDLHHGHSHGYSHESLYHR--GHGHDHEHSH 114
>URB1_USTMA (P40349) Siderophore biosynthesis regulatory protein URBS1| Length = 950 Score = 28.9 bits (63), Expect = 8.1 Identities = 14/47 (29%), Positives = 19/47 (40%) Frame = -1 Query: 334 PHHRHPPSYQRPLAHHHLVSLGHDSAHHHMASPALL*CCCAEGHSNQ 194 PHH H + H V GH HHH + + + GH+ Q Sbjct: 752 PHHHHHHHHHHANHASHAVHHGHHHHHHHPVTVS----ASSHGHAGQ 794
>CPO_DROME (Q01617) Protein couch potato| Length = 738 Score = 28.9 bits (63), Expect = 8.1 Identities = 19/61 (31%), Positives = 23/61 (37%), Gaps = 2/61 (3%) Frame = -1 Query: 322 HPPSYQRPLAHHHLVSLGH--DSAHHHMASPALL*CCCAEGHSNQTLVVPLDHHLPPGQK 149 HP S+ +AH H +S H HHH S A H Q HH Q+ Sbjct: 149 HPISHTHQIAHTHQISHSHPISHPHHHQLSFA---------HPTQFAAAVAAHHQQQQQQ 199 Query: 148 Q 146 Q Sbjct: 200 Q 200 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,264,142 Number of Sequences: 219361 Number of extensions: 1381234 Number of successful extensions: 4393 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 3846 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4274 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
