| Clone Name | basd27f22 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | DXS_PSESM (Q889Q1) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2... | 30 | 3.5 | 2 | ENVE_SALTY (Q56030) Probable lipoprotein envE precursor | 30 | 4.5 | 3 | DXS_PSEPK (Q88QG7) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2... | 29 | 7.8 |
|---|
>DXS_PSESM (Q889Q1) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7)| (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) Length = 631 Score = 30.4 bits (67), Expect = 3.5 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = +2 Query: 290 KDGVDVSGVSVLFEELYIHIYVDELVMVVLLA*IMCDGCMSKPVLVIMHIYI 445 K+G D+ S F E Y + + E V L A + C+G SKPV+ I ++ Sbjct: 355 KEGSDLVDFSERFPERYFDVAIAEQHAVTLAAGMACEG--SKPVVAIYSTFL 404
>ENVE_SALTY (Q56030) Probable lipoprotein envE precursor| Length = 173 Score = 30.0 bits (66), Expect = 4.5 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = +2 Query: 128 GVRDGTTLILWEWTEGDNQRW 190 G ++GT +IL+ T DNQRW Sbjct: 108 GTKEGTPIILYSCTGNDNQRW 128
>DXS_PSEPK (Q88QG7) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7)| (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) Length = 631 Score = 29.3 bits (64), Expect = 7.8 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = +2 Query: 290 KDGVDVSGVSVLFEELYIHIYVDELVMVVLLA*IMCDGCMSKPVLVIMHIYI 445 K+G D+ S + E Y + + E V L A + C+G SKPV+ I ++ Sbjct: 354 KEGSDLVDFSERYPERYFDVAIAEQHAVTLAAGMACEG--SKPVVAIYSTFL 403 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,084,811 Number of Sequences: 219361 Number of extensions: 1737519 Number of successful extensions: 3647 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3548 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3647 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)