ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd27f22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_183466.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1093 Score = 149 bits (75), Expect = 1e-32 Identities = 129/147 (87%) Strand = Plus / Plus Query: 62 tgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggcgacaaggac 121 ||||||||||||||||||||||||||| | ||||| || ||||||||||| ||||||||| Sbjct: 664 tgcatcaggatggtgaacaacatctacctcaacttcgacgcgctccatggagacaaggac 723 Query: 122 catggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgagggcgacaac 181 || ||||| |||||||| ||||||||||| | || ||||||||| ||||| |||||| Sbjct: 724 cacggcggcgtgcgcgacggaaccaccctggtgctctgggagtggtgcgagggtgacaac 783 Query: 182 cagcgctggaagatcgttgcctggtga 208 |||||||||||||| ||| |||||||| Sbjct: 784 cagcgctggaagattgttccctggtga 810
>dbj|AK104820.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A11, full insert sequence Length = 1093 Score = 149 bits (75), Expect = 1e-32 Identities = 129/147 (87%) Strand = Plus / Plus Query: 62 tgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggcgacaaggac 121 ||||||||||||||||||||||||||| | ||||| || ||||||||||| ||||||||| Sbjct: 664 tgcatcaggatggtgaacaacatctacctcaacttcgacgcgctccatggagacaaggac 723 Query: 122 catggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgagggcgacaac 181 || ||||| |||||||| ||||||||||| | || ||||||||| ||||| |||||| Sbjct: 724 cacggcggcgtgcgcgacggaaccaccctggtgctctgggagtggtgcgagggtgacaac 783 Query: 182 cagcgctggaagatcgttgcctggtga 208 |||||||||||||| ||| |||||||| Sbjct: 784 cagcgctggaagattgttccctggtga 810
>dbj|AK104555.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-F10, full insert sequence Length = 1088 Score = 149 bits (75), Expect = 1e-32 Identities = 129/147 (87%) Strand = Plus / Plus Query: 62 tgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggcgacaaggac 121 ||||||||||||||||||||||||||| | ||||| || ||||||||||| ||||||||| Sbjct: 661 tgcatcaggatggtgaacaacatctacctcaacttcgacgcgctccatggagacaaggac 720 Query: 122 catggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgagggcgacaac 181 || ||||| |||||||| ||||||||||| | || ||||||||| ||||| |||||| Sbjct: 721 cacggcggcgtgcgcgacggaaccaccctggtgctctgggagtggtgcgagggtgacaac 780 Query: 182 cagcgctggaagatcgttgcctggtga 208 |||||||||||||| ||| |||||||| Sbjct: 781 cagcgctggaagattgttccctggtga 807
>dbj|AK071375.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095C18, full insert sequence Length = 1392 Score = 149 bits (75), Expect = 1e-32 Identities = 129/147 (87%) Strand = Plus / Plus Query: 62 tgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggcgacaaggac 121 ||||||||||||||||||||||||||| | ||||| || ||||||||||| ||||||||| Sbjct: 947 tgcatcaggatggtgaacaacatctacctcaacttcgacgcgctccatggagacaaggac 1006 Query: 122 catggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgagggcgacaac 181 || ||||| |||||||| ||||||||||| | || ||||||||| ||||| |||||| Sbjct: 1007 cacggcggcgtgcgcgacggaaccaccctggtgctctgggagtggtgcgagggtgacaac 1066 Query: 182 cagcgctggaagatcgttgcctggtga 208 |||||||||||||| ||| |||||||| Sbjct: 1067 cagcgctggaagattgttccctggtga 1093
>dbj|AK060132.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C04, full insert sequence Length = 1220 Score = 149 bits (75), Expect = 1e-32 Identities = 129/147 (87%) Strand = Plus / Plus Query: 62 tgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggcgacaaggac 121 ||||||||||||||||||||||||||| | ||||| || ||||||||||| ||||||||| Sbjct: 704 tgcatcaggatggtgaacaacatctacctcaacttcgacgcgctccatggagacaaggac 763 Query: 122 catggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgagggcgacaac 181 || ||||| |||||||| ||||||||||| | || ||||||||| ||||| |||||| Sbjct: 764 cacggcggcgtgcgcgacggaaccaccctggtgctctgggagtggtgcgagggtgacaac 823 Query: 182 cagcgctggaagatcgttgcctggtga 208 |||||||||||||| ||| |||||||| Sbjct: 824 cagcgctggaagattgttccctggtga 850
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 147 bits (74), Expect = 4e-32 Identities = 128/146 (87%) Strand = Plus / Plus Query: 62 tgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggcgacaaggac 121 ||||||||||||||||||||||||||| | ||||| || ||||||||||| ||||||||| Sbjct: 227641 tgcatcaggatggtgaacaacatctacctcaacttcgacgcgctccatggagacaaggac 227700 Query: 122 catggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgagggcgacaac 181 || ||||| |||||||| ||||||||||| | || ||||||||| ||||| |||||| Sbjct: 227701 cacggcggcgtgcgcgacggaaccaccctggtgctctgggagtggtgcgagggtgacaac 227760 Query: 182 cagcgctggaagatcgttgcctggtg 207 |||||||||||||| ||| ||||||| Sbjct: 227761 cagcgctggaagattgttccctggtg 227786
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436E04 Length = 144644 Score = 147 bits (74), Expect = 4e-32 Identities = 128/146 (87%) Strand = Plus / Plus Query: 62 tgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggcgacaaggac 121 ||||||||||||||||||||||||||| | ||||| || ||||||||||| ||||||||| Sbjct: 69311 tgcatcaggatggtgaacaacatctacctcaacttcgacgcgctccatggagacaaggac 69370 Query: 122 catggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgagggcgacaac 181 || ||||| |||||||| ||||||||||| | || ||||||||| ||||| |||||| Sbjct: 69371 cacggcggcgtgcgcgacggaaccaccctggtgctctgggagtggtgcgagggtgacaac 69430 Query: 182 cagcgctggaagatcgttgcctggtg 207 |||||||||||||| ||| ||||||| Sbjct: 69431 cagcgctggaagattgttccctggtg 69456
>ref|XM_479570.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1209 Score = 111 bits (56), Expect = 2e-21 Identities = 122/144 (84%) Strand = Plus / Plus Query: 53 ggctaccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggc 112 |||| ||||||| || | |||||||||||||||||| | |||||||| || |||||||| Sbjct: 1048 ggcttccgctgcgtccgcatggtgaacaacatctacctcaactttgacgccttccatggc 1107 Query: 113 gacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgag 172 ||||||||||| ||||| || | ||| || |||||| || | || ||||||||| | || Sbjct: 1108 gacaaggaccacggcggcgtccacgacggcaccaccgtcgtgctctgggagtggtgtaag 1167 Query: 173 ggcgacaaccagcgctggaagatc 196 |||||||||||||||||||||||| Sbjct: 1168 ggcgacaaccagcgctggaagatc 1191 Score = 71.9 bits (36), Expect = 2e-09 Identities = 117/144 (81%) Strand = Plus / Plus Query: 53 ggctaccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggc 112 |||| |||||||||| | ||||| |||||||||||| | ||||| || || |||| ||| Sbjct: 360 ggcttccgctgcatccgcatggtcaacaacatctacctcaacttggacgccttccacggc 419 Query: 113 gacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgag 172 |||||| ||| ||||| |||| ||| || |||||| || | || ||||||||| || Sbjct: 420 gacaagtcccacggcggcgtgcacgacggcaccaccgtcgtgctctgggagtggtgcaag 479 Query: 173 ggcgacaaccagcgctggaagatc 196 |||||||||||| ||||||||||| Sbjct: 480 ggcgacaaccagtgctggaagatc 503
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 111 bits (56), Expect = 2e-21 Identities = 122/144 (84%) Strand = Plus / Plus Query: 53 ggctaccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggc 112 |||| ||||||| || | |||||||||||||||||| | |||||||| || |||||||| Sbjct: 28940751 ggcttccgctgcgtccgcatggtgaacaacatctacctcaactttgacgccttccatggc 28940810 Query: 113 gacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgag 172 ||||||||||| ||||| || | ||| || |||||| || | || ||||||||| | || Sbjct: 28940811 gacaaggaccacggcggcgtccacgacggcaccaccgtcgtgctctgggagtggtgtaag 28940870 Query: 173 ggcgacaaccagcgctggaagatc 196 |||||||||||||||||||||||| Sbjct: 28940871 ggcgacaaccagcgctggaagatc 28940894 Score = 71.9 bits (36), Expect = 2e-09 Identities = 117/144 (81%) Strand = Plus / Plus Query: 53 ggctaccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggc 112 |||| |||||||||| | |||||||||||||||||| | ||||| || || |||||||| Sbjct: 28951961 ggcttccgctgcatccgcatggtgaacaacatctacctcaacttcgacgccttccatggc 28952020 Query: 113 gacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgag 172 |||||||| || ||||| | | |||||| ||| || | |||||| ||||| ||| Sbjct: 28952021 gacaaggatcacggcggcatccacgatggcaccgagatcgtgctgtggaagtggtgcgag 28952080 Query: 173 ggcgacaaccagcgctggaagatc 196 || ||||||||||||||||||||| Sbjct: 28952081 ggtgacaaccagcgctggaagatc 28952104 Score = 71.9 bits (36), Expect = 2e-09 Identities = 117/144 (81%) Strand = Plus / Plus Query: 53 ggctaccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggc 112 |||| |||||||||| | ||||| |||||||||||| | ||||| || || |||| ||| Sbjct: 28939749 ggcttccgctgcatccgcatggtcaacaacatctacctcaacttggacgccttccacggc 28939808 Query: 113 gacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgag 172 |||||| ||| ||||| |||| ||| || |||||| || | || ||||||||| || Sbjct: 28939809 gacaagtcccacggcggcgtgcacgacggcaccaccgtcgtgctctgggagtggtgcaag 28939868 Query: 173 ggcgacaaccagcgctggaagatc 196 |||||||||||| ||||||||||| Sbjct: 28939869 ggcgacaaccagtgctggaagatc 28939892 Score = 69.9 bits (35), Expect = 8e-09 Identities = 110/135 (81%) Strand = Plus / Plus Query: 62 tgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggcgacaaggac 121 |||||| | |||||||||||||||||| | ||||| || || |||| ||||||||| || Sbjct: 28955942 tgcatccgcatggtgaacaacatctacctcaacttcgacgccttccacggcgacaagtac 28956001 Query: 122 catggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgagggcgacaac 181 || ||||| || ||||| || ||| | || | || ||| ||||| |||||||||||| Sbjct: 28956002 cacggcggcgtccgcgacggcaccgacatcgtgctctggaagtggtgcgagggcgacaac 28956061 Query: 182 cagcgctggaagatc 196 ||||||||||||||| Sbjct: 28956062 cagcgctggaagatc 28956076 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 105 tccatggcgacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagt 164 |||| |||||||||||||| ||||| || ||||| || |||||| || | || ||||||| Sbjct: 28951326 tccacggcgacaaggaccacggcggcgtccgcgacggcaccaccgtcgtgctctgggagt 28951385 Query: 165 ggactgagggcgacaaccagcgctggaagatc 196 || |||||||||||||| ||||||||||| Sbjct: 28951386 ggtgcaagggcgacaaccagagctggaagatc 28951417
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 111 bits (56), Expect = 2e-21 Identities = 122/144 (84%) Strand = Plus / Plus Query: 53 ggctaccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggc 112 |||| ||||||| || | |||||||||||||||||| | |||||||| || |||||||| Sbjct: 58288 ggcttccgctgcgtccgcatggtgaacaacatctacctcaactttgacgccttccatggc 58347 Query: 113 gacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgag 172 ||||||||||| ||||| || | ||| || |||||| || | || ||||||||| | || Sbjct: 58348 gacaaggaccacggcggcgtccacgacggcaccaccgtcgtgctctgggagtggtgtaag 58407 Query: 173 ggcgacaaccagcgctggaagatc 196 |||||||||||||||||||||||| Sbjct: 58408 ggcgacaaccagcgctggaagatc 58431 Score = 71.9 bits (36), Expect = 2e-09 Identities = 117/144 (81%) Strand = Plus / Plus Query: 53 ggctaccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggc 112 |||| |||||||||| | |||||||||||||||||| | ||||| || || |||||||| Sbjct: 69498 ggcttccgctgcatccgcatggtgaacaacatctacctcaacttcgacgccttccatggc 69557 Query: 113 gacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgag 172 |||||||| || ||||| | | |||||| ||| || | |||||| ||||| ||| Sbjct: 69558 gacaaggatcacggcggcatccacgatggcaccgagatcgtgctgtggaagtggtgcgag 69617 Query: 173 ggcgacaaccagcgctggaagatc 196 || ||||||||||||||||||||| Sbjct: 69618 ggtgacaaccagcgctggaagatc 69641 Score = 71.9 bits (36), Expect = 2e-09 Identities = 117/144 (81%) Strand = Plus / Plus Query: 53 ggctaccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggc 112 |||| |||||||||| | ||||| |||||||||||| | ||||| || || |||| ||| Sbjct: 57286 ggcttccgctgcatccgcatggtcaacaacatctacctcaacttggacgccttccacggc 57345 Query: 113 gacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgag 172 |||||| ||| ||||| |||| ||| || |||||| || | || ||||||||| || Sbjct: 57346 gacaagtcccacggcggcgtgcacgacggcaccaccgtcgtgctctgggagtggtgcaag 57405 Query: 173 ggcgacaaccagcgctggaagatc 196 |||||||||||| ||||||||||| Sbjct: 57406 ggcgacaaccagtgctggaagatc 57429 Score = 69.9 bits (35), Expect = 8e-09 Identities = 110/135 (81%) Strand = Plus / Plus Query: 62 tgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggcgacaaggac 121 |||||| | |||||||||||||||||| | ||||| || || |||| ||||||||| || Sbjct: 73479 tgcatccgcatggtgaacaacatctacctcaacttcgacgccttccacggcgacaagtac 73538 Query: 122 catggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgagggcgacaac 181 || ||||| || ||||| || ||| | || | || ||| ||||| |||||||||||| Sbjct: 73539 cacggcggcgtccgcgacggcaccgacatcgtgctctggaagtggtgcgagggcgacaac 73598 Query: 182 cagcgctggaagatc 196 ||||||||||||||| Sbjct: 73599 cagcgctggaagatc 73613 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 105 tccatggcgacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagt 164 |||| |||||||||||||| ||||| || ||||| || |||||| || | || ||||||| Sbjct: 68863 tccacggcgacaaggaccacggcggcgtccgcgacggcaccaccgtcgtgctctgggagt 68922 Query: 165 ggactgagggcgacaaccagcgctggaagatc 196 || |||||||||||||| ||||||||||| Sbjct: 68923 ggtgcaagggcgacaaccagagctggaagatc 68954
>ref|NM_187532.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1122 Score = 109 bits (55), Expect = 1e-20 Identities = 130/155 (83%) Strand = Plus / Plus Query: 53 ggctaccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggc 112 |||| |||||||||| | |||||||||||||||||| | ||||| || || ||||| ||| Sbjct: 892 ggcttccgctgcatccgcatggtgaacaacatctacctcaacttcgacgccctccacggc 951 Query: 113 gacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgag 172 ||||||||||| ||||| || ||||| || |||||| || || ||| ||||| ||| Sbjct: 952 gacaaggaccacggcggcgtccgcgacggcaccaccgtcgcgctctggaagtggtgcgag 1011 Query: 173 ggcgacaaccagcgctggaagatcgttgcctggtg 207 |||||||||||||||||||||||||| ||||||| Sbjct: 1012 ggcgacaaccagcgctggaagatcgtcccctggtg 1046 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Plus Query: 58 ccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggcgacaa 117 |||||||||| | ||| ||||||||||| | | ||||| || ||| |||| |||||||| Sbjct: 390 ccgctgcatccgcatgctgaacaacatccgcctcaacttcgacgcgttccacggcgacaa 449 Query: 118 ggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgagggcga 177 |||||| ||||| |||| ||| || |||||| || | || ||||||||| | ||||||| Sbjct: 450 ggaccacggcggcgtgcacgacggcaccaccatcgtgctctgggagtgggccaagggcga 509 Query: 178 caaccagcgctggaagatc 196 ||||||| ||||||||||| Sbjct: 510 caaccagtgctggaagatc 528
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 109 bits (55), Expect = 1e-20 Identities = 130/155 (83%) Strand = Plus / Minus Query: 53 ggctaccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggc 112 |||| |||||||||| | |||||||||||||||||| | ||||| || || ||||| ||| Sbjct: 11931507 ggcttccgctgcatccgcatggtgaacaacatctacctcaacttcgacgccctccacggc 11931448 Query: 113 gacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgag 172 ||||||||||| ||||| || ||||| || |||||| || || ||| ||||| ||| Sbjct: 11931447 gacaaggaccacggcggcgtccgcgacggcaccaccgtcgcgctctggaagtggtgcgag 11931388 Query: 173 ggcgacaaccagcgctggaagatcgttgcctggtg 207 |||||||||||||||||||||||||| ||||||| Sbjct: 11931387 ggcgacaaccagcgctggaagatcgtcccctggtg 11931353 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Minus Query: 58 ccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggcgacaa 117 |||||||||| | ||| ||||||||||| | | ||||| || ||| |||| |||||||| Sbjct: 11932118 ccgctgcatccgcatgctgaacaacatccgcctcaacttcgacgcgttccacggcgacaa 11932059 Query: 118 ggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgagggcga 177 |||||| ||||| |||| ||| || |||||| || | || ||||||||| | ||||||| Sbjct: 11932058 ggaccacggcggcgtgcacgacggcaccaccatcgtgctctgggagtgggccaagggcga 11931999 Query: 178 caaccagcgctggaagatc 196 ||||||| ||||||||||| Sbjct: 11931998 caaccagtgctggaagatc 11931980
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 109 bits (55), Expect = 1e-20 Identities = 130/155 (83%) Strand = Plus / Minus Query: 53 ggctaccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggc 112 |||| |||||||||| | |||||||||||||||||| | ||||| || || ||||| ||| Sbjct: 11928270 ggcttccgctgcatccgcatggtgaacaacatctacctcaacttcgacgccctccacggc 11928211 Query: 113 gacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgag 172 ||||||||||| ||||| || ||||| || |||||| || || ||| ||||| ||| Sbjct: 11928210 gacaaggaccacggcggcgtccgcgacggcaccaccgtcgcgctctggaagtggtgcgag 11928151 Query: 173 ggcgacaaccagcgctggaagatcgttgcctggtg 207 |||||||||||||||||||||||||| ||||||| Sbjct: 11928150 ggcgacaaccagcgctggaagatcgtcccctggtg 11928116 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Minus Query: 58 ccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggcgacaa 117 |||||||||| | ||| ||||||||||| | | ||||| || ||| |||| |||||||| Sbjct: 11928881 ccgctgcatccgcatgctgaacaacatccgcctcaacttcgacgcgttccacggcgacaa 11928822 Query: 118 ggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgagggcga 177 |||||| ||||| |||| ||| || |||||| || | || ||||||||| | ||||||| Sbjct: 11928821 ggaccacggcggcgtgcacgacggcaccaccatcgtgctctgggagtgggccaagggcga 11928762 Query: 178 caaccagcgctggaagatc 196 ||||||| ||||||||||| Sbjct: 11928761 caaccagtgctggaagatc 11928743
>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0014I10, complete sequence Length = 113946 Score = 109 bits (55), Expect = 1e-20 Identities = 130/155 (83%) Strand = Plus / Minus Query: 53 ggctaccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggc 112 |||| |||||||||| | |||||||||||||||||| | ||||| || || ||||| ||| Sbjct: 32769 ggcttccgctgcatccgcatggtgaacaacatctacctcaacttcgacgccctccacggc 32710 Query: 113 gacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgag 172 ||||||||||| ||||| || ||||| || |||||| || || ||| ||||| ||| Sbjct: 32709 gacaaggaccacggcggcgtccgcgacggcaccaccgtcgcgctctggaagtggtgcgag 32650 Query: 173 ggcgacaaccagcgctggaagatcgttgcctggtg 207 |||||||||||||||||||||||||| ||||||| Sbjct: 32649 ggcgacaaccagcgctggaagatcgtcccctggtg 32615 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Minus Query: 58 ccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggcgacaa 117 |||||||||| | ||| ||||||||||| | | ||||| || ||| |||| |||||||| Sbjct: 33380 ccgctgcatccgcatgctgaacaacatccgcctcaacttcgacgcgttccacggcgacaa 33321 Query: 118 ggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgagggcga 177 |||||| ||||| |||| ||| || |||||| || | || ||||||||| | ||||||| Sbjct: 33320 ggaccacggcggcgtgcacgacggcaccaccatcgtgctctgggagtgggccaagggcga 33261 Query: 178 caaccagcgctggaagatc 196 ||||||| ||||||||||| Sbjct: 33260 caaccagtgctggaagatc 33242
>emb|X95402.1|OSOSR40C1 O.sativa mRNA for novel protein, osr40c1 Length = 1458 Score = 107 bits (54), Expect = 4e-20 Identities = 123/146 (84%) Strand = Plus / Plus Query: 53 ggctaccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggc 112 |||| |||||||||| | |||||||||||||||||| | ||||| || || ||||| ||| Sbjct: 954 ggcttccgctgcatccgcatggtgaacaacatctacctcaacttcgacgccctccacggc 1013 Query: 113 gacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgag 172 ||||||||||| ||||| || ||||| || |||||| || || ||| ||||| ||| Sbjct: 1014 gacaaggaccacggcggcgtccgcgacggcaccaccgtcgcgctctggaagtggtgcgag 1073 Query: 173 ggcgacaaccagcgctggaagatcgt 198 |||||||||||||||||||||||||| Sbjct: 1074 ggcgacaaccagcgctggaagatcgt 1099 Score = 77.8 bits (39), Expect = 3e-11 Identities = 114/139 (82%) Strand = Plus / Plus Query: 58 ccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggcgacaa 117 ||||||||| | ||| ||||||||||| | | ||||| || ||| |||| |||||||| Sbjct: 452 ccgctgcattcgcatgctgaacaacatccgcctcaacttcgacgcgttccacggcgacaa 511 Query: 118 ggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgagggcga 177 |||||| ||||| |||| ||| || |||||| || | || ||||||||| | ||||||| Sbjct: 512 ggaccacggcggcgtgcacgacggcaccaccatcgtgctctgggagtgggccaagggcga 571 Query: 178 caaccagcgctggaagatc 196 ||||||| ||||||||||| Sbjct: 572 caaccagtgctggaagatc 590
>dbj|AK069815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031K10, full insert sequence Length = 1765 Score = 107 bits (54), Expect = 4e-20 Identities = 123/146 (84%) Strand = Plus / Plus Query: 53 ggctaccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggc 112 |||| |||||||||| | |||||||||||||||||| | ||||| || || ||||| ||| Sbjct: 967 ggcttccgctgcatccgcatggtgaacaacatctacctcaacttcgacgccctccacggc 1026 Query: 113 gacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgag 172 ||||||||||| ||||| || ||||| || |||||| || || ||| ||||| ||| Sbjct: 1027 gacaaggaccacggcggcgtccgcgacggcaccaccgtcgcgctctggaagtggtgcgag 1086 Query: 173 ggcgacaaccagcgctggaagatcgt 198 |||||||||||||||||||||||||| Sbjct: 1087 ggcgacaaccagcgctggaagatcgt 1112 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Plus Query: 58 ccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggcgacaa 117 |||||||||| | ||| ||||||||||| | | ||||| || ||| |||| |||||||| Sbjct: 465 ccgctgcatccgcatgctgaacaacatccgcctcaacttcgacgcgttccacggcgacaa 524 Query: 118 ggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgagggcga 177 |||||| ||||| |||| ||| || |||||| || | || ||||||||| | ||||||| Sbjct: 525 ggaccacggcggcgtgcacgacggcaccaccatcgtgctctgggagtgggccaagggcga 584 Query: 178 caaccagcgctggaagatc 196 ||||||| ||||||||||| Sbjct: 585 caaccagtgctggaagatc 603
>gb|BT016654.1| Zea mays clone Contig487 mRNA sequence Length = 905 Score = 91.7 bits (46), Expect = 2e-15 Identities = 121/146 (82%) Strand = Plus / Plus Query: 53 ggctaccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggc 112 |||| ||||||| || | ||||| |||||||||||| | ||||| || || |||| ||| Sbjct: 404 ggcttccgctgcgtccgcatggtcaacaacatctacctcaacttcgacgccttccacggc 463 Query: 113 gacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgag 172 ||||||||||| ||||| |||||||| || |||| | || | || ||| ||||| ||| Sbjct: 464 gacaaggaccacggcggcgtgcgcgacggcaccaacatcgtgctctggaagtggtgcgag 523 Query: 173 ggcgacaaccagcgctggaagatcgt 198 |||||||||||||||||||||||||| Sbjct: 524 ggcgacaaccagcgctggaagatcgt 549
>gb|BT017376.1| Zea mays clone EL01N0325G07.c mRNA sequence Length = 778 Score = 79.8 bits (40), Expect = 9e-12 Identities = 118/144 (81%) Strand = Plus / Plus Query: 53 ggctaccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggc 112 |||| |||||||||| | ||||||||||||||| | | ||||| || || |||| ||| Sbjct: 539 ggcttccgctgcatccgcatggtgaacaacatccgcctcaacttcgacgccttccacggc 598 Query: 113 gacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgag 172 ||||||| ||| ||||| |||| ||| || |||||| | | |||||||||||| | || Sbjct: 599 gacaagggccacggcggcgtgcacgacggcaccaccgtggtgctgtgggagtgggccaag 658 Query: 173 ggcgacaaccagcgctggaagatc 196 |||||||||||| ||||||||||| Sbjct: 659 ggcgacaaccagagctggaagatc 682
>ref|XM_479572.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1239 Score = 71.9 bits (36), Expect = 2e-09 Identities = 117/144 (81%) Strand = Plus / Plus Query: 53 ggctaccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggc 112 |||| |||||||||| | |||||||||||||||||| | ||||| || || |||||||| Sbjct: 742 ggcttccgctgcatccgcatggtgaacaacatctacctcaacttcgacgccttccatggc 801 Query: 113 gacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgag 172 |||||||| || ||||| | | |||||| ||| || | |||||| ||||| ||| Sbjct: 802 gacaaggatcacggcggcatccacgatggcaccgagatcgtgctgtggaagtggtgcgag 861 Query: 173 ggcgacaaccagcgctggaagatc 196 || ||||||||||||||||||||| Sbjct: 862 ggtgacaaccagcgctggaagatc 885 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 105 tccatggcgacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagt 164 |||| |||||||||||||| ||||| || ||||| || |||||| || | || ||||||| Sbjct: 275 tccacggcgacaaggaccacggcggcgtccgcgacggcaccaccgtcgtgctctgggagt 334 Query: 165 ggactgagggcgacaaccagcgctggaagatc 196 || |||||||||||||| ||||||||||| Sbjct: 335 ggtgcaagggcgacaaccagagctggaagatc 366
>ref|XM_479571.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1511 Score = 71.9 bits (36), Expect = 2e-09 Identities = 117/144 (81%) Strand = Plus / Plus Query: 53 ggctaccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggc 112 |||| |||||||||| | |||||||||||||||||| | ||||| || || |||||||| Sbjct: 957 ggcttccgctgcatccgcatggtgaacaacatctacctcaacttcgacgccttccatggc 1016 Query: 113 gacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgag 172 |||||||| || ||||| | | |||||| ||| || | |||||| ||||| ||| Sbjct: 1017 gacaaggatcacggcggcatccacgatggcaccgagatcgtgctgtggaagtggtgcgag 1076 Query: 173 ggcgacaaccagcgctggaagatc 196 || ||||||||||||||||||||| Sbjct: 1077 ggtgacaaccagcgctggaagatc 1100 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 105 tccatggcgacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagt 164 |||| |||||||||||||| ||||| || ||||| || |||||| || | || ||||||| Sbjct: 490 tccacggcgacaaggaccacggcggcgtccgcgacggcaccaccgtcgtgctctgggagt 549 Query: 165 ggactgagggcgacaaccagcgctggaagatc 196 || |||||||||||||| ||||||||||| Sbjct: 550 ggtgcaagggcgacaaccagagctggaagatc 581
>emb|Y08987.1|OSR40G2 O.sativa osr40g2 gene Length = 2101 Score = 71.9 bits (36), Expect = 2e-09 Identities = 117/144 (81%) Strand = Plus / Plus Query: 53 ggctaccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggc 112 |||| |||||||||| | |||||||||||||||||| | ||||| || || |||||||| Sbjct: 1888 ggcttccgctgcatccgcatggtgaacaacatctacctcaacttcgacgccttccatggc 1947 Query: 113 gacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgag 172 |||||||| || ||||| | | |||||| ||| || | |||||| ||||| ||| Sbjct: 1948 gacaaggatcacggcggcatccacgatggcaccgagatcgtgctgtggaagtggtgcgag 2007 Query: 173 ggcgacaaccagcgctggaagatc 196 || ||||||||||||||||||||| Sbjct: 2008 ggtgacaaccagcgctggaagatc 2031 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 105 tccatggcgacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagt 164 |||| |||||||||||||| ||||| || ||||| || |||||| || | || ||||||| Sbjct: 1253 tccacggcgacaaggaccacggcggcgtccgcgacggcaccaccgtcgtgctctgggagt 1312 Query: 165 ggactgagggcgacaaccagcgctggaagatc 196 || |||||||||||||| ||||||||||| Sbjct: 1313 ggtgcaagggcgacaaccagagctggaagatc 1344
>dbj|AK103324.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125K07, full insert sequence Length = 1512 Score = 71.9 bits (36), Expect = 2e-09 Identities = 117/144 (81%) Strand = Plus / Plus Query: 53 ggctaccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggc 112 |||| |||||||||| | |||||||||||||||||| | ||||| || || |||||||| Sbjct: 957 ggcttccgctgcatccgcatggtgaacaacatctacctcaacttcgacgccttccatggc 1016 Query: 113 gacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgag 172 |||||||| || ||||| | | |||||| ||| || | |||||| ||||| ||| Sbjct: 1017 gacaaggatcacggcggcatccacgatggcaccgagatcgtgctgtggaagtggtgcgag 1076 Query: 173 ggcgacaaccagcgctggaagatc 196 || ||||||||||||||||||||| Sbjct: 1077 ggtgacaaccagcgctggaagatc 1100 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 105 tccatggcgacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagt 164 |||| |||||||||||||| ||||| || ||||| || |||||| || | || ||||||| Sbjct: 490 tccacggcgacaaggaccacggcggcgtccgcgacggcaccaccgtcgtgctctgggagt 549 Query: 165 ggactgagggcgacaaccagcgctggaagatc 196 || |||||||||||||| ||||||||||| Sbjct: 550 ggtgcaagggcgacaaccagagctggaagatc 581
>dbj|AK060899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D04, full insert sequence Length = 1239 Score = 71.9 bits (36), Expect = 2e-09 Identities = 117/144 (81%) Strand = Plus / Plus Query: 53 ggctaccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggc 112 |||| |||||||||| | |||||||||||||||||| | ||||| || || |||||||| Sbjct: 742 ggcttccgctgcatccgcatggtgaacaacatctacctcaacttcgacgccttccatggc 801 Query: 113 gacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgag 172 |||||||| || ||||| | | |||||| ||| || | |||||| ||||| ||| Sbjct: 802 gacaaggatcacggcggcatccacgatggcaccgagatcgtgctgtggaagtggtgcgag 861 Query: 173 ggcgacaaccagcgctggaagatc 196 || ||||||||||||||||||||| Sbjct: 862 ggtgacaaccagcgctggaagatc 885 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 105 tccatggcgacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagt 164 |||| |||||||||||||| ||||| || ||||| || |||||| || | || ||||||| Sbjct: 275 tccacggcgacaaggaccacggcggcgtccgcgacggcaccaccgtcgtgctctgggagt 334 Query: 165 ggactgagggcgacaaccagcgctggaagatc 196 || |||||||||||||| ||||||||||| Sbjct: 335 ggtgcaagggcgacaaccagagctggaagatc 366
>ref|XM_479573.1| Oryza sativa (japonica cultivar-group), mRNA Length = 988 Score = 69.9 bits (35), Expect = 8e-09 Identities = 110/135 (81%) Strand = Plus / Plus Query: 62 tgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggcgacaaggac 121 |||||| | |||||||||||||||||| | ||||| || || |||| ||||||||| || Sbjct: 565 tgcatccgcatggtgaacaacatctacctcaacttcgacgccttccacggcgacaagtac 624 Query: 122 catggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgagggcgacaac 181 || ||||| || ||||| || ||| | || | || ||| ||||| |||||||||||| Sbjct: 625 cacggcggcgtccgcgacggcaccgacatcgtgctctggaagtggtgcgagggcgacaac 684 Query: 182 cagcgctggaagatc 196 ||||||||||||||| Sbjct: 685 cagcgctggaagatc 699
>emb|Y08988.1|OSR40G3 O.sativa osr40g3 gene Length = 1531 Score = 69.9 bits (35), Expect = 8e-09 Identities = 110/135 (81%) Strand = Plus / Plus Query: 62 tgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggcgacaaggac 121 |||||| | |||||||||||||||||| | ||||| || || |||| ||||||||| || Sbjct: 1182 tgcatccgcatggtgaacaacatctacctcaacttcgacgccttccacggcgacaagtac 1241 Query: 122 catggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgagggcgacaac 181 || ||||| || ||||| || ||| | || | || ||| ||||| |||||||||||| Sbjct: 1242 cacggcggcgtccgcgacggcaccgacatcgtgctctggaagtggtgcgagggcgacaac 1301 Query: 182 cagcgctggaagatc 196 ||||||||||||||| Sbjct: 1302 cagcgctggaagatc 1316
>dbj|AK072989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145K15, full insert sequence Length = 987 Score = 69.9 bits (35), Expect = 8e-09 Identities = 110/135 (81%) Strand = Plus / Plus Query: 62 tgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggcgacaaggac 121 |||||| | |||||||||||||||||| | ||||| || || |||| ||||||||| || Sbjct: 564 tgcatccgcatggtgaacaacatctacctcaacttcgacgccttccacggcgacaagtac 623 Query: 122 catggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgagggcgacaac 181 || ||||| || ||||| || ||| | || | || ||| ||||| |||||||||||| Sbjct: 624 cacggcggcgtccgcgacggcaccgacatcgtgctctggaagtggtgcgagggcgacaac 683 Query: 182 cagcgctggaagatc 196 ||||||||||||||| Sbjct: 684 cagcgctggaagatc 698
>gb|BT017211.1| Zea mays clone EL01N0372B08.c mRNA sequence Length = 567 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 105 tccatggcgacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagt 164 |||| |||||||||||||| ||||| |||||||| || ||| | || | || ||| ||| Sbjct: 140 tccacggcgacaaggaccacggcggcgtgcgcgacggccccaacatcgtgctctggaagt 199 Query: 165 ggactgagggcgacaaccagcgctggaagatcgt 198 || ||||||||||||||||||||||||||||| Sbjct: 200 ggtgcgagggcgacaaccagcgctggaagatcgt 233
>gb|DQ022951.1| Triticum aestivum stress responsive protein mRNA, complete cds Length = 846 Score = 61.9 bits (31), Expect = 2e-06 Identities = 100/123 (81%) Strand = Plus / Plus Query: 71 atggtgaacaacatctacttgaactttgatgcgctccatggcgacaaggaccatggcggt 130 |||||||||||||||||| | ||||| || || ||| | ||||||||| |||| ||||| Sbjct: 470 atggtgaacaacatctacctcaacttcgacgccctcaacggcgacaagtaccacggcggc 529 Query: 131 gtgcgcgatggaaccaccctcattctgtgggagtggactgagggcgacaaccagcgctgg 190 |||||||| || ||| || | || ||| ||||| ||||||||||||||||||||| Sbjct: 530 gtgcgcgacggcaccgaggtcgtgctctggaagtggtgcgagggcgacaaccagcgctgg 589 Query: 191 aag 193 ||| Sbjct: 590 aag 592
>gb|BT016442.1| Zea mays clone Contig275 mRNA sequence Length = 1443 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 105 tccatggcgacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagt 164 |||| |||||||||||||| ||||| |||| ||| || ||| || || | || ||||||| Sbjct: 468 tccacggcgacaaggaccacggcggcgtgcacgacggcaccgccgtcgtgctctgggagt 527 Query: 165 ggactgagggcgacaaccagcgctggaagatc 196 || |||||||||||||| ||||||||||| Sbjct: 528 ggtgcaagggcgacaaccagagctggaagatc 559 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 170 gagggcgacaaccagcgctggaagatc 196 ||||||||||||||||||||||||||| Sbjct: 1031 gagggcgacaaccagcgctggaagatc 1057 Score = 42.1 bits (21), Expect = 1.9 Identities = 63/77 (81%) Strand = Plus / Plus Query: 53 ggctaccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggc 112 |||| ||||||| || | ||||| |||||||||||| | ||||| || || |||| ||| Sbjct: 914 ggcttccgctgcgtccgcatggtcaacaacatctacctcaacttcgacgccttccacggc 973 Query: 113 gacaaggaccatggcgg 129 ||||||| ||| ||||| Sbjct: 974 gacaaggcccacggcgg 990
>gb|BT018086.1| Zea mays clone EL01N0552C09.c mRNA sequence Length = 666 Score = 56.0 bits (28), Expect = 1e-04 Identities = 115/144 (79%) Strand = Plus / Plus Query: 53 ggctaccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggc 112 |||| ||||||| || | ||||| |||||||||||| | ||||| || || ||||| ||| Sbjct: 281 ggcttccgctgcgtccgcatggtcaacaacatctacctcaacttcgacgccctccacggc 340 Query: 113 gacaaggaccatggcggtgtgcgcgatggaaccaccctcattctgtgggagtggactgag 172 |||||| || ||||| || || || || |||| | || | || ||| ||||| ||| Sbjct: 341 gacaagtggcacggcggcgtccgtgacggcaccaacgtcgtgctctggaagtggtgcgag 400 Query: 173 ggcgacaaccagcgctggaagatc 196 |||||||||||||||||||||||| Sbjct: 401 ggcgacaaccagcgctggaagatc 424
>gb|BT018342.1| Zea mays clone EL01T0403C03.c mRNA sequence Length = 690 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 170 gagggcgacaaccagcgctggaagatc 196 ||||||||||||||||||||||||||| Sbjct: 283 gagggcgacaaccagcgctggaagatc 309
>gb|BT018000.1| Zea mays clone EL01N0526G03.c mRNA sequence Length = 842 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 170 gagggcgacaaccagcgctggaagatc 196 ||||||||||||||||||||||||||| Sbjct: 465 gagggcgacaaccagcgctggaagatc 491 Score = 42.1 bits (21), Expect = 1.9 Identities = 63/77 (81%) Strand = Plus / Plus Query: 53 ggctaccgctgcatcaggatggtgaacaacatctacttgaactttgatgcgctccatggc 112 |||| ||||||| || | ||||| |||||||||||| | ||||| || || |||| ||| Sbjct: 348 ggcttccgctgcgtccgcatggtcaacaacatctacctcaacttcgacgccttccacggc 407 Query: 113 gacaaggaccatggcgg 129 ||||||| ||| ||||| Sbjct: 408 gacaaggcccacggcgg 424
>gb|DQ083207.1| Oryza sativa (indica cultivar-group) clone 6S8A23 mRNA sequence Length = 332 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 173 ggcgacaaccagcgctggaagatcgt 198 |||||||||||||||||||||||||| Sbjct: 1 ggcgacaaccagcgctggaagatcgt 26
>gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold Length = 1743090 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 425 gttattatgcatatatatatacat 448 |||||||||||||||||||||||| Sbjct: 1572031 gttattatgcatatatatatacat 1572054
>gb|AC146532.3| Otolemur garnettii clone CH256-151F13, complete sequence Length = 197659 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 425 gttattatgcatatatatatacat 448 |||||||||||||||||||||||| Sbjct: 26600 gttattatgcatatatatatacat 26623
>gb|AY815769.1| Schistosoma japonicum SJCHGC01083 protein mRNA, complete cds Length = 1358 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 424 tgttattatgcatatatatata 445 |||||||||||||||||||||| Sbjct: 1345 tgttattatgcatatatatata 1324
>gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genomic sequence, complete sequence Length = 90387 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 422 cttgttattatgcatatatatataca 447 ||||||| |||||||||||||||||| Sbjct: 65530 cttgttagtatgcatatatatataca 65555
>emb|AL732322.10| Mouse DNA sequence from clone RP23-234H9 on chromosome X, complete sequence Length = 114453 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 427 tattatgcatatatatatacat 448 |||||||||||||||||||||| Sbjct: 67649 tattatgcatatatatatacat 67628
>gb|AC129319.4| Mus musculus BAC clone RP24-127J16 from chromosome 8, complete sequence Length = 169835 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 430 tatgcatatatatatacatgc 450 ||||||||||||||||||||| Sbjct: 36486 tatgcatatatatatacatgc 36466
>gb|AC162282.6| Mus musculus chromosome 8, clone RP23-154H18, complete sequence Length = 217566 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 430 tatgcatatatatatacatgc 450 ||||||||||||||||||||| Sbjct: 488 tatgcatatatatatacatgc 508
>emb|BX571723.7| Zebrafish DNA sequence from clone DKEYP-51D5 in linkage group 17, complete sequence Length = 201159 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 426 ttattatgcatatatatatacatgc 450 |||||||||||||||| |||||||| Sbjct: 88247 ttattatgcatatataaatacatgc 88223
>gb|AC087516.12| Homo sapiens chromosome 15, clone RP11-475A13, complete sequence Length = 187299 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 430 tatgcatatatatatacatgc 450 ||||||||||||||||||||| Sbjct: 7686 tatgcatatatatatacatgc 7706
>gb|AC103988.7| Homo sapiens chromosome 15, clone RP11-618N24, complete sequence Length = 192400 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 430 tatgcatatatatatacatgc 450 ||||||||||||||||||||| Sbjct: 49331 tatgcatatatatatacatgc 49311
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 actttgatgcgctccatggcg 113 ||||||||||||||||||||| Sbjct: 3551461 actttgatgcgctccatggcg 3551481
>dbj|AK132639.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833441J21 product:hypothetical Immunoglobulin-like/Immunoglobulin subtype/Immunoglobulin V-type/Ig-like domain profile containing protein, full insert sequence Length = 1298 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 tgccatgtgacatgtttgtga 468 ||||||||||||||||||||| Sbjct: 837 tgccatgtgacatgtttgtga 817
>gb|AC021180.6| Homo sapiens BAC clone RP11-727M10 from 4, complete sequence Length = 173940 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 430 tatgcatatatatatacatgc 450 ||||||||||||||||||||| Sbjct: 158303 tatgcatatatatatacatgc 158323
>gb|AC102625.8| Mus musculus chromosome 8, clone RP23-453E3, complete sequence Length = 167288 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 430 tatgcatatatatatacatgc 450 ||||||||||||||||||||| Sbjct: 122010 tatgcatatatatatacatgc 121990
>ref|XM_393548.2| PREDICTED: Apis mellifera similar to CG33249-PA (LOC410061), mRNA Length = 4535 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 428 attatgcatatatatatacat 448 ||||||||||||||||||||| Sbjct: 4134 attatgcatatatatatacat 4154
>emb|BX842671.2| Mouse DNA sequence from clone RP23-282E22 on chromosome 4, complete sequence Length = 6510 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 tgccatgtgacatgtttgtga 468 ||||||||||||||||||||| Sbjct: 5815 tgccatgtgacatgtttgtga 5795
>emb|BX537328.7| Mouse DNA sequence from clone RP23-269E13 on chromosome 4, complete sequence Length = 16634 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 tgccatgtgacatgtttgtga 468 ||||||||||||||||||||| Sbjct: 1305 tgccatgtgacatgtttgtga 1285
>dbj|AB028609.2| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K7P8 Length = 78529 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 428 attatgcatatatatatacat 448 ||||||||||||||||||||| Sbjct: 64536 attatgcatatatatatacat 64516
>gb|AC091254.77| Mus musculus strain C57BL/6J clone rp23-364j24 map 17, complete sequence Length = 187696 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 tgtttctgttttgtttgagga 333 ||||||||||||||||||||| Sbjct: 140052 tgtttctgttttgtttgagga 140032
>gb|AC091484.8| Mus musculus strain C57BL/6J chromosome 17 clone rp23-386a1, complete sequence Length = 205343 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tgtttctgttttgtttgagga 333 ||||||||||||||||||||| Sbjct: 176408 tgtttctgttttgtttgagga 176428
>gb|AC149584.4| Mus musculus BAC clone RP24-298L13 from 8, complete sequence Length = 182904 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 430 tatgcatatatatatacatgc 450 ||||||||||||||||||||| Sbjct: 10848 tatgcatatatatatacatgc 10868
>gb|AC140929.4| Mus musculus BAC clone RP23-258I3 from 8, complete sequence Length = 221905 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 430 tatgcatatatatatacatgc 450 ||||||||||||||||||||| Sbjct: 116921 tatgcatatatatatacatgc 116901
>gb|AC116759.13| Mus musculus chromosome 18, clone RP23-383E12, complete sequence Length = 203049 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 catatatatatacatgccat 453 |||||||||||||||||||| Sbjct: 8810 catatatatatacatgccat 8791
>gb|AC123698.15| Mus musculus chromosome 15, clone RP23-331P14, complete sequence Length = 201739 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 163159 tatgcatatatatatacatg 163178
>ref|NM_129462.2| Arabidopsis thaliana unknown protein AT2G39050 mRNA, complete cds Length = 1271 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 ggcgacaaccagcgctggaagatc 196 ||||||||||||| |||||||||| Sbjct: 943 ggcgacaaccagctctggaagatc 966
>gb|AC122011.3| Mus musculus chromosome 10 clone RP24-352E6, complete sequence Length = 181468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 114092 tatgcatatatatatacatg 114111
>gb|DQ213100.1| Taeniopygia guttata clone 0058P0015F04 MGC75753-like mRNA, complete sequence Length = 1368 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ggctaccgctgcatcaggat 72 |||||||||||||||||||| Sbjct: 436 ggctaccgctgcatcaggat 455
>ref|XM_530087.1| PREDICTED: Pan troglodytes LOC456449 (LOC456449), mRNA Length = 1546 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 atgtgtgatggatgcatgag 411 |||||||||||||||||||| Sbjct: 1141 atgtgtgatggatgcatgag 1122
>gb|AC147352.2| Xenopus tropicalis clone CH216-157J16, complete sequence Length = 141579 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 ttggtttatctcatcatatt 500 |||||||||||||||||||| Sbjct: 13897 ttggtttatctcatcatatt 13878
>gb|AC106842.7| Mus musculus chromosome 7, clone RP24-165F13, complete sequence Length = 140252 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 81186 tatgcatatatatatacatg 81205
>gb|AC005742.1| Mus musculus chromosome 11, BAC clone CT7-111I18 (LBNL M01), complete sequence Length = 159500 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 102507 tatgcatatatatatacatg 102488
>gb|AC162892.7| Mus musculus chromosome 5, clone RP23-257D19, complete sequence Length = 155647 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 23957 tatgcatatatatatacatg 23938
>gb|AC166079.2| Mus musculus BAC clone RP23-51L15 from chromosome 7, complete sequence Length = 193749 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ttatgcatatatatatacat 448 |||||||||||||||||||| Sbjct: 70142 ttatgcatatatatatacat 70123
>gb|AC123992.8| Mus musculus chromosome 15, clone RP24-308E20, complete sequence Length = 170609 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 3998 tatgcatatatatatacatg 4017
>gb|AC122941.3| Mus musculus BAC clone RP23-1E3 from chromosome 8, complete sequence Length = 244220 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 109326 tatgcatatatatatacatg 109345
>gb|AC125406.4| Mus musculus BAC clone RP23-32C18 from chromosome 19, complete sequence Length = 208557 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 ttatgcatatatatatacat 448 |||||||||||||||||||| Sbjct: 121651 ttatgcatatatatatacat 121670
>gb|AC137583.7| Mus musculus chromosome 13, clone RP23-140F24, complete sequence Length = 218518 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ttatgcatatatatatacat 448 |||||||||||||||||||| Sbjct: 78837 ttatgcatatatatatacat 78818
>gb|AC115954.11| Mus musculus chromosome 16, clone RP24-62P21, complete sequence Length = 205819 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 65561 tatgcatatatatatacatg 65580
>gb|AC161364.4| Mus musculus BAC clone RP24-353J16 from chromosome 6, complete sequence Length = 182872 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atacatgccatgtgacatgt 462 |||||||||||||||||||| Sbjct: 80063 atacatgccatgtgacatgt 80082
>gb|AC124980.7| Mus musculus chromosome 13, clone RP24-133J11, complete sequence Length = 215331 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ttatgcatatatatatacat 448 |||||||||||||||||||| Sbjct: 194740 ttatgcatatatatatacat 194721
>gb|AC115357.5| Mus musculus BAC clone RP23-81J4 from chromosome 14, complete sequence Length = 233685 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 aagcaagtactgaatgtttc 280 |||||||||||||||||||| Sbjct: 148984 aagcaagtactgaatgtttc 149003
>gb|AC136513.2| Mus musculus BAC clone RP23-477N9 from chromosome 5, complete sequence Length = 188517 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 atgcatatatatatacatgc 450 |||||||||||||||||||| Sbjct: 134596 atgcatatatatatacatgc 134577
>gb|AC129336.4| Mus musculus BAC clone RP23-113I7 from chromosome 10, complete sequence Length = 215437 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 22348 tatgcatatatatatacatg 22367
>gb|AC135362.3| Mus musculus BAC clone RP23-286J13 from chromosome 8, complete sequence Length = 173357 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 144254 tatgcatatatatatacatg 144235
>gb|AC133509.2| Mus musculus BAC clone RP23-402L22 from chromosome 19, complete sequence Length = 214658 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 119023 tatgcatatatatatacatg 119042
>gb|AC124383.3| Mus musculus BAC clone RP24-411E14 from chromosome 18, complete sequence Length = 175177 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ttatgcatatatatatacat 448 |||||||||||||||||||| Sbjct: 71636 ttatgcatatatatatacat 71617
>gb|AC084392.1| Mus musculus BAC clone GS1-182G5 from UL, complete sequence Length = 142732 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 41230 tatgcatatatatatacatg 41211
>ref|XM_736171.1| Plasmodium chabaudi chabaudi hypothetical protein (PC109152.00.0) partial mRNA Length = 180 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 150 tatgcatatatatatacatg 169
>gb|AC004413.2| Homo sapiens PAC clone RP4-650P9 from 7, complete sequence Length = 114827 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 tatgctgaagtttgttggtt 236 |||||||||||||||||||| Sbjct: 26448 tatgctgaagtttgttggtt 26467
>gb|AC113292.6| Mus musculus chromosome 15, clone RP23-418M3, complete sequence Length = 218109 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 ttattatgcatatatatata 445 |||||||||||||||||||| Sbjct: 190516 ttattatgcatatatatata 190497
>gb|AC146202.3| Pan troglodytes BAC clone RP43-35A11 from 7, complete sequence Length = 161532 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 47296 tatgcatatatatatacatg 47315
>emb|Z97353.3|HS90L6 Human DNA sequence from clone RP1-90L6 on chromosome 22q11.21-11.23, complete sequence Length = 190837 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 tgccatgtgacatgtttgtg 467 |||||||||||||||||||| Sbjct: 189622 tgccatgtgacatgtttgtg 189641
>emb|AL512600.5| Human DNA sequence from clone RP11-452A14 on chromosome 6, complete sequence Length = 141172 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 ttggtttatctcatcatatt 500 |||||||||||||||||||| Sbjct: 27761 ttggtttatctcatcatatt 27780
>emb|AL355482.13| Human DNA sequence from clone RP11-538D16 on chromosome 1q25.1-31.3 Contains the gene for a protein similar to zinc finger protein 135 (clone pHZ-17) zinc finger protein 61 (LOC127665) and two novel genes (LOC149157), complete sequence Length = 74515 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 atgtgtgatggatgcatgag 411 |||||||||||||||||||| Sbjct: 39403 atgtgtgatggatgcatgag 39384
>gb|AC158960.4| Mus musculus chromosome 1, clone RP23-315O2, complete sequence Length = 176947 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ttatgcatatatatatacat 448 |||||||||||||||||||| Sbjct: 543 ttatgcatatatatatacat 524
>emb|CR385039.8| Zebrafish DNA sequence from clone DKEYP-31D1 in linkage group 24, complete sequence Length = 166302 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 tattatgcatatatatatacatgc 450 ||||||| |||||||||||||||| Sbjct: 70509 tattatggatatatatatacatgc 70486
>gb|AC128692.11| Homo sapiens 3 BAC RP11-743G11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 83627 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 3031 tatgcatatatatatacatg 3012
>emb|CR382398.1| Plasmodium falciparum chromosome 6, complete sequence; segment 1/5 Length = 349418 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 422 cttgttattatgcatatatatata 445 ||||||||||| |||||||||||| Sbjct: 24473 cttgttattatacatatatatata 24496
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 ttattatgcatatatatata 445 |||||||||||||||||||| Sbjct: 427980 ttattatgcatatatatata 427961
>gb|AC102876.31| Mus musculus chromosome 1, clone RP24-492P7, complete sequence Length = 185929 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 164827 tatgcatatatatatacatg 164808
>emb|AL593845.5| Zebrafish DNA sequence from clone BUSM1-142B24 in linkage group 17 Contains a novel gene for a protein similar to human FLJ11186, a novel gene similar to human KIAA1316 and fly CG2747, a novel gene for a protein with a HECT-domain (ubiquitin-transferase) and a CpG island, complete sequence Length = 89159 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 430 tatgcatatatatatacatgccat 453 ||||||||||||||||||| |||| Sbjct: 9289 tatgcatatatatatacataccat 9266
>emb|AL645741.15| Mouse DNA sequence from clone RP23-239O19 on chromosome 11 Contains the Rad50 gene for RAD50 homolog (S. cerevisiae), the Il5 gene for interleukin 5, a pseudogene similar to part of glyceraldehyde-3-phosphate dehydrogenase (Gapd), a novel gene, a ribosomal protein S2 (Rps2) pseudogene, the Il13 gene for interleukin 13, the 5' end of the Il4 gene for interleukin 4 and a CpG island, complete sequence Length = 121121 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 16492 tatgcatatatatatacatg 16473
>emb|AL592185.35| Mouse DNA sequence from clone RP23-341J22 on chromosome 11 Contains a novel gene, the Nos2 gene for inducible macrophage nitric oxide synthase 2 and the 3' end of the Lgals9 gene for soluble galactose binding lectin 9, complete sequence Length = 178443 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 ttattatgcatatatatata 445 |||||||||||||||||||| Sbjct: 22052 ttattatgcatatatatata 22033
>emb|AL672026.11| Mouse DNA sequence from clone RP23-403O11 on chromosome X, complete sequence Length = 200566 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 ttgttattatgcatatatat 442 |||||||||||||||||||| Sbjct: 186327 ttgttattatgcatatatat 186346
>gb|AC122938.3| Homo sapiens BAC clone RP11-201O10 from 4, complete sequence Length = 149028 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 ttattatgcatatatatata 445 |||||||||||||||||||| Sbjct: 37393 ttattatgcatatatatata 37374
>gb|AF525421.1| Mus musculus adenosine deaminase ADAR2 mRNA, complete cds; alternatively spliced Length = 6917 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 274 atgtttctggaataaaaaggatgg 297 |||||||||||||||||| ||||| Sbjct: 440 atgtttctggaataaaaatgatgg 417
>emb|BX324186.12| Zebrafish DNA sequence from clone DKEY-18B8 in linkage group 17, complete sequence Length = 153540 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 430 tatgcatatatatatacatgccat 453 ||||||||||||||||||| |||| Sbjct: 129855 tatgcatatatatatacataccat 129832
>gb|AC116562.6| Homo sapiens BAC clone RP11-489M13 from 4, complete sequence Length = 174826 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 18178 tatgcatatatatatacatg 18159
>ref|NM_001024838.1| Mus musculus adenosine deaminase, RNA-specific, B1 (Adarb1), transcript variant 3, mRNA Length = 6662 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 274 atgtttctggaataaaaaggatgg 297 |||||||||||||||||| ||||| Sbjct: 488 atgtttctggaataaaaatgatgg 465
>gb|AC080081.5| Homo sapiens BAC clone RP11-530E5 from 4, complete sequence Length = 77730 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 attatgcatatatatataca 447 |||||||||||||||||||| Sbjct: 69248 attatgcatatatatataca 69267
>gb|AC005770.3| Arabidopsis thaliana chromosome 2 clone T7F6 map CIC10A06, complete sequence Length = 96827 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 ggcgacaaccagcgctggaagatc 196 ||||||||||||| |||||||||| Sbjct: 77171 ggcgacaaccagctctggaagatc 77194
>gb|AC002510.3| Arabidopsis thaliana chromosome 2 clone T32G6 map CIC11C08, complete sequence Length = 91979 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 474 aatagaattggtttatctcatcat 497 |||||||||||||| ||||||||| Sbjct: 11409 aatagaattggtttgtctcatcat 11432
>gb|AY093795.1| Arabidopsis thaliana At2g39050/T7F6.22 mRNA, complete cds Length = 954 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 ggcgacaaccagcgctggaagatc 196 ||||||||||||| |||||||||| Sbjct: 919 ggcgacaaccagctctggaagatc 942
>gb|AC107055.3| Homo sapiens BAC clone RP11-436G13 from 4, complete sequence Length = 144794 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 60026 tatgcatatatatatacatg 60045
>gb|AC018953.11| Homo sapiens chromosome 8, clone RP11-573J24, complete sequence Length = 182712 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 atgcatatatatatacatgc 450 |||||||||||||||||||| Sbjct: 83092 atgcatatatatatacatgc 83111
>gb|AC079403.3| Homo sapiens BAC clone RP11-704A20 from 4, complete sequence Length = 180699 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 ttattatgcatatatatata 445 |||||||||||||||||||| Sbjct: 14688 ttattatgcatatatatata 14707
>gb|AC023670.6| Homo sapiens BAC clone RP11-457M7 from Xq23, complete sequence Length = 59565 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 41985 tatgcatatatatatacatg 42004
>gb|AC008426.4| Homo sapiens chromosome 5 clone CTC-307A7, complete sequence Length = 150870 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 atgcatatatatatacatgc 450 |||||||||||||||||||| Sbjct: 25168 atgcatatatatatacatgc 25149
>dbj|AK164931.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030028L10 product:adenosine deaminase, RNA-specific, B1, full insert sequence Length = 3291 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 274 atgtttctggaataaaaaggatgg 297 |||||||||||||||||| ||||| Sbjct: 456 atgtttctggaataaaaatgatgg 433
>gb|DP000045.1| Pongo pygmaeus target 106 genomic scaffold Length = 644818 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 269966 tatgcatatatatatacatg 269985
>gb|AF411801.1|AF411801 Arabidopsis thaliana At2g39050/T7F6.22 mRNA, complete cds Length = 1209 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 ggcgacaaccagcgctggaagatc 196 ||||||||||||| |||||||||| Sbjct: 943 ggcgacaaccagctctggaagatc 966
>gb|AC158380.2| Mus musculus BAC clone RP24-178I16 from chromosome 6, complete sequence Length = 168179 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 51895 tatgcatatatatatacatg 51876
>gb|AC157772.4| Mus musculus chromosome 15, clone RP24-323B16, complete sequence Length = 182149 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 181830 tatgcatatatatatacatg 181811
>dbj|AK089594.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830003P06 product:hypothetical protein, full insert sequence Length = 1807 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 ttatgcatatatatatacat 448 |||||||||||||||||||| Sbjct: 1005 ttatgcatatatatatacat 1024
>gb|BC062806.1| Mus musculus adenosine deaminase, RNA-specific, B1, mRNA (cDNA clone IMAGE:1244670) Length = 730 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 274 atgtttctggaataaaaaggatgg 297 |||||||||||||||||| ||||| Sbjct: 617 atgtttctggaataaaaatgatgg 594
>gb|AC155909.9| Mus musculus 10 BAC RP24-477D23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 195877 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 113294 tatgcatatatatatacatg 113275
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 ttattatgcatatatatata 445 |||||||||||||||||||| Sbjct: 506381 ttattatgcatatatatata 506400
>emb|BX819436.1|CNS0A8S2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZF10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1226 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 ggcgacaaccagcgctggaagatc 196 ||||||||||||| |||||||||| Sbjct: 929 ggcgacaaccagctctggaagatc 952
>gb|AC068042.5| Homo sapiens BAC clone RP11-535B12 from 2, complete sequence Length = 172617 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 catatatatatacatgccat 453 |||||||||||||||||||| Sbjct: 120983 catatatatatacatgccat 120964
>gb|AC138517.2| Homo sapiens chromosome 5 clone XXfos-850G5, complete sequence Length = 42673 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 tataacttagtttttggtgg 541 |||||||||||||||||||| Sbjct: 2974 tataacttagtttttggtgg 2993
>gb|AC152834.2| Pan troglodytes BAC clone CH251-513M11 from chromosome unknown, complete sequence Length = 213409 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 ttattatgcatatatatata 445 |||||||||||||||||||| Sbjct: 169576 ttattatgcatatatatata 169595
>gb|AC123690.19| Mus musculus chromosome 1, clone RP23-322M7, complete sequence Length = 191990 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ttatgcatatatatatacat 448 |||||||||||||||||||| Sbjct: 138467 ttatgcatatatatatacat 138448
>gb|AF463769.1| Mus musculus strain C57BL/6J cytokine gene cluster, partial sequence Length = 34408 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 11776 tatgcatatatatatacatg 11795
>gb|AY087909.1| Arabidopsis thaliana clone 39558 mRNA, complete sequence Length = 1186 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 ggcgacaaccagcgctggaagatc 196 ||||||||||||| |||||||||| Sbjct: 943 ggcgacaaccagctctggaagatc 966
>gb|AC138085.2| Homo sapiens X BAC RP11-146D5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 75932 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 41983 tatgcatatatatatacatg 42002
>gb|AY162454.1| Mus musculus adenosine deaminase (Adarb1) mRNA, complete cds, alternatively spliced Length = 6583 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 274 atgtttctggaataaaaaggatgg 297 |||||||||||||||||| ||||| Sbjct: 440 atgtttctggaataaaaatgatgg 417
>dbj|AP007256.1| Danio rerio DNA, clone:DKEY-188F22, complete sequence Length = 155274 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 agcagggatgttggggcagg 54 |||||||||||||||||||| Sbjct: 86423 agcagggatgttggggcagg 86442
>gb|AC111094.12| Mus musculus chromosome 3, clone RP23-171O7, complete sequence Length = 187464 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 atgcatatatatatacatgc 450 |||||||||||||||||||| Sbjct: 161258 atgcatatatatatacatgc 161277
>gb|AC101851.11| Mus musculus chromosome 7, clone RP23-276E14, complete sequence Length = 175088 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 163236 tatgcatatatatatacatg 163255
>emb|CR954168.11| Zebrafish DNA sequence from clone DKEY-264P5 in linkage group 19, complete sequence Length = 128597 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 gcatatatatatacatgccatgtg 456 |||||||||||||| ||||||||| Sbjct: 76552 gcatatatatatacgtgccatgtg 76529
>gb|AC154694.2| Mus musculus BAC clone RP24-341A16 from 16, complete sequence Length = 171564 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 426 ttattatgcatatatatatacatg 449 |||||||||||||| ||||||||| Sbjct: 88340 ttattatgcatatacatatacatg 88363
>emb|BX664631.6| Zebrafish DNA sequence from clone DKEY-28H18 in linkage group 22, complete sequence Length = 220242 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 433 gcatatatatatacatgccatgtg 456 |||||||||||||| ||||||||| Sbjct: 67744 gcatatatatatacgtgccatgtg 67767
>emb|BX927293.15| Zebrafish DNA sequence from clone DKEY-95H12 in linkage group 18, complete sequence Length = 150229 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 ttattatgcatatatatata 445 |||||||||||||||||||| Sbjct: 134212 ttattatgcatatatatata 134231
>emb|CR450840.18| Zebrafish DNA sequence from clone CH211-261D9 in linkage group 14, complete sequence Length = 194617 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 433 gcatatatatatacatgccatgtg 456 |||||||||||||| ||||||||| Sbjct: 185036 gcatatatatatacgtgccatgtg 185059 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 433 gcatatatatatacatgccatgtg 456 |||||||||||||| ||||||||| Sbjct: 184693 gcatatatatatacgtgccatgtg 184716 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 433 gcatatatatatacatgccatgtg 456 |||||||||||||| ||||||||| Sbjct: 184350 gcatatatatatacgtgccatgtg 184373 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 433 gcatatatatatacatgccatgtg 456 |||||||||||||| ||||||||| Sbjct: 184007 gcatatatatatacgtgccatgtg 184030 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 433 gcatatatatatacatgccatgtg 456 |||||||||||||| ||||||||| Sbjct: 183664 gcatatatatatacgtgccatgtg 183687 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 433 gcatatatatatacatgccatgtg 456 |||||||||||||| ||||||||| Sbjct: 183321 gcatatatatatacgtgccatgtg 183344
>gb|AC155176.6| Mus musculus 10 BAC RP24-219F17 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 186725 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 274 atgtttctggaataaaaaggatgg 297 |||||||||||||||||| ||||| Sbjct: 81210 atgtttctggaataaaaatgatgg 81187
>emb|AL357172.3|CNS05TDW Human chromosome 14 DNA sequence BAC R-789A21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 198714 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 atgcatatatatatacatgc 450 |||||||||||||||||||| Sbjct: 156404 atgcatatatatatacatgc 156385
>gb|AC121315.14| Mus musculus chromosome 3, clone RP24-488I7, complete sequence Length = 153807 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ttatgcatatatatatacat 448 |||||||||||||||||||| Sbjct: 46765 ttatgcatatatatatacat 46746
>dbj|AP003094.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-659O1, complete sequences Length = 179724 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 atgcatatatatatacatgc 450 |||||||||||||||||||| Sbjct: 178978 atgcatatatatatacatgc 178997
>dbj|AP001561.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-732G1, complete sequences Length = 195800 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 atgcatatatatatacatgc 450 |||||||||||||||||||| Sbjct: 47233 atgcatatatatatacatgc 47252
>gb|AC161802.7| Mus musculus chromosome 5, clone RP23-477G6, complete sequence Length = 176484 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 29782 tatgcatatatatatacatg 29801
>gb|AC137126.13| Mus musculus chromosome 15, clone RP24-250I9, complete sequence Length = 193459 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 atgcatatatatatacatgc 450 |||||||||||||||||||| Sbjct: 175466 atgcatatatatatacatgc 175485
>gb|AC119921.12| Mus musculus chromosome 12, clone RP24-252B23, complete sequence Length = 162290 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 106252 tatgcatatatatatacatg 106233
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 ttattatgcatatatatata 445 |||||||||||||||||||| Sbjct: 506381 ttattatgcatatatatata 506400
>emb|BX000493.1|CNS08CDJ Oryza sativa chromosome 11, . BAC OSJNBb0037D03 of library OSJNBb from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130544 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 ttattatgcatatatatata 445 |||||||||||||||||||| Sbjct: 63931 ttattatgcatatatatata 63912
>gb|AC002406.1|AC002406 Mouse chromosome X BAC B178A13 (Research Genetics mouse BAC library) complete sequence Length = 194985 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 ttgttattatgcatatatat 442 |||||||||||||||||||| Sbjct: 121221 ttgttattatgcatatatat 121202
>gb|AC136147.4| Mus musculus BAC clone RP23-18B3 from 8, complete sequence Length = 210916 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 47350 tatgcatatatatatacatg 47369
>gb|AC138621.4| Mus musculus BAC clone RP23-273E16 from 6, complete sequence Length = 225376 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 tatgcatatatatatacatg 449 |||||||||||||||||||| Sbjct: 176688 tatgcatatatatatacatg 176669
>emb|AL731697.16| Mouse DNA sequence from clone RP23-188L7 on chromosome X, complete sequence Length = 200250 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ttatgcatatatatatacat 448 |||||||||||||||||||| Sbjct: 144532 ttatgcatatatatatacat 144513
>emb|AL929143.5| Mouse DNA sequence from clone RP23-339G18 on chromosome 2, complete sequence Length = 30695 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 423 ttgttattatgcatatatatatac 446 |||||||||| ||||||||||||| Sbjct: 19954 ttgttattatacatatatatatac 19931
>emb|AL845543.5| Mouse DNA sequence from clone RP23-257O6 on chromosome 2, complete sequence Length = 108221 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ttatgcatatatatatacat 448 |||||||||||||||||||| Sbjct: 99284 ttatgcatatatatatacat 99265
>emb|AL772293.7| Mouse DNA sequence from clone RP23-57D24 on chromosome 4, complete sequence Length = 251930 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 ttatgcatatatatatacat 448 |||||||||||||||||||| Sbjct: 228845 ttatgcatatatatatacat 228864
>gb|AC124634.24| Mus musculus chromosome 18, clone RP23-450K16, complete sequence Length = 178989 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 catatatatatacatgccat 453 |||||||||||||||||||| Sbjct: 146848 catatatatatacatgccat 146829
>gb|AF478849.1| Etlingera littoralis tRNA-Lys (trnK) gene, intron; and maturase K (matK) gene, complete cds; chloroplast genes for chloroplast products Length = 2680 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 ttattatgcatatatatata 445 |||||||||||||||||||| Sbjct: 730 ttattatgcatatatatata 711 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,231,401 Number of Sequences: 3902068 Number of extensions: 14231401 Number of successful extensions: 255693 Number of sequences better than 10.0: 156 Number of HSP's better than 10.0 without gapping: 156 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 254394 Number of HSP's gapped (non-prelim): 1280 length of query: 553 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 530 effective length of database: 17,143,297,704 effective search space: 9085947783120 effective search space used: 9085947783120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
