ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd27f20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119115 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 119056 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119055 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 118996 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118995 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 118936 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118935 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 118876 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118875 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 118816 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118815 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 118756 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118755 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 118696 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118695 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 118645 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96041 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 96100 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96101 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 96160 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96161 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 96220 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96221 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 96280 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96281 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 96340 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96341 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 96400 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96401 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 96460 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96461 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 96511
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119115 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 119056 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119055 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 118996 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118995 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 118936 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118935 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 118876 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118875 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 118816 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118815 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 118756 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118755 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 118696 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118695 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 118645 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96041 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 96100 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96101 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 96160 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96161 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 96220 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96221 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 96280 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96281 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 96340 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96341 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 96400 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96401 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 96460 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96461 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 96511
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119064 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 119005 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119004 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 118945 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118944 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 118885 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118884 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 118825 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118824 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 118765 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118764 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 118705 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118704 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 118645 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118644 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 118594 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95986 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 96045 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96046 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 96105 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96106 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 96165 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96166 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 96225 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96226 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 96285 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96286 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 96345 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96346 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 96405 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96406 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 96456
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508619 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 31508678 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508679 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 31508738 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508739 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 31508798 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508799 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 31508858 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508859 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 31508918 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508919 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 31508978 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508979 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 31509038 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509039 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 31509089 Score = 605 bits (305), Expect = e-170 Identities = 305/305 (100%) Strand = Plus / Minus Query: 167 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 227 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11513198 Query: 287 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513197 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11513138 Query: 347 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513137 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11513078 Query: 407 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513077 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11513018 Query: 467 tcggc 471 ||||| Sbjct: 11513017 tcggc 11513013 Score = 402 bits (203), Expect = e-109 Identities = 203/203 (100%) Strand = Plus / Minus Query: 269 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320663 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27320604 Query: 329 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320603 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27320544 Query: 389 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320543 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27320484 Query: 449 gaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||| Sbjct: 27320483 gaagcggaagcgagaatgtcggc 27320461 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 183 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 242 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 243 taaaggaggtggggg 257 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 186 gtcgagagggaaacagcccggatcaccagctaaggccc 223 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 85 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 139 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83977 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 83918 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83917 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 83858 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83857 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 83798 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83797 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 83738 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83737 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 83678 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83677 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 83618 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83617 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 83558 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83557 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 83507
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119084 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 119025 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119024 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 118965 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118964 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 118905 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118904 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 118845 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118844 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 118785 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118784 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 118725 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118724 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 118665 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118664 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 118614 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96034 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 96093 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96094 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 96153 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96154 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 96213 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96214 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 96273 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96274 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 96333 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96334 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 96393 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96394 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 96453 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96454 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 96504
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123082 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 123141 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123142 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 123201 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123202 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 123261 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123262 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 123321 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123322 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 123381 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123382 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 123441 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123442 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 123501 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123502 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 123552 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14808 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 14867 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14868 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 14927 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14928 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 14987 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14988 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 15047 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15048 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 15107 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15108 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 15167 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15168 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 15227 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15228 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 15278
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141616 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 141675 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141676 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 141735 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141736 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 141795 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141796 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 141855 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141856 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 141915 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141916 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 141975 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141976 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 142035 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142036 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 142086
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268968 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 9269027 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269028 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 9269087 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269088 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 9269147 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269148 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 9269207 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269208 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 9269267 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269268 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 9269327 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269328 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 9269387 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269388 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 9269438 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228468 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 9228527 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228528 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 9228587 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228588 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 9228647 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228648 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 9228707 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228708 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 9228767 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228768 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 9228827 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228828 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 9228887 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228888 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 9228938 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165056 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 9165115 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165116 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 9165175 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165176 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 9165235 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165236 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 9165295 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165296 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 9165355 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165356 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 9165415 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165416 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 9165475 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165476 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 9165526 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056882 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 9056941 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056942 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 9057001 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057002 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 9057061 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057062 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 9057121 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057122 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 9057181 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057182 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 9057241 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057242 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 9057301 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057302 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 9057352
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938953 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 19939012 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939013 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 19939072 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939073 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 19939132 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939133 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 19939192 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939193 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 19939252 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939253 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 19939312 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939313 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 19939372 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939373 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 19939423 Score = 926 bits (467), Expect = 0.0 Identities = 470/471 (99%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387820 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 10387879 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387880 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 10387939 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387940 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 10387999 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388000 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 10388059 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388060 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 10388119 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388120 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 10388179 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 10388180 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggagagcgttccgccttagag 10388239 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388240 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 10388290 Score = 926 bits (467), Expect = 0.0 Identities = 470/471 (99%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276478 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 10276419 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276418 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 10276359 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276358 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 10276299 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276298 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 10276239 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276238 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 10276179 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276178 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 10276119 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276118 caatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 10276059 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276058 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 10276008 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 323 gatcgagcgcccttgcgctgaagatgaacggggctaagc 361 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15833511 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15833473 Score = 54.0 bits (27), Expect = 4e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 92 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 151 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 152 tcggccagtgagacgatgggggataagcttcatcgtcgagag 193 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151 Score = 48.1 bits (24), Expect = 0.026 Identities = 51/60 (85%) Strand = Plus / Minus Query: 264 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 323 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736127 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736068
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241313 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 9241254 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241253 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 9241194 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241193 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 9241134 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241133 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 9241074 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241073 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 9241014 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241013 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 9240954 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240953 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 9240894 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240893 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 9240843 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 57 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 116 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 117 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 176 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 177 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 222 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 109 bits (55), Expect = 8e-21 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 211 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 264 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 3580326 Query: 265 acagccaggaggtttgcctagaagcagccaccctttaaagag 306 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3580325 acaaccaggaggtttgcctagaagcagccaccctttaaagag 3580284 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 372 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 |||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3580285 agctatgggatatcaaaatgcatcggtaggggagcgttccgccttag 3580239 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Minus Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagct 375 |||| |||| ||||| |||||||||||||||||| ||||| Sbjct: 22199132 tgcgttgaaaatgaatggggctaagcgatctgccaaagct 22199093 Score = 40.1 bits (20), Expect = 6.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 210 accagctaaggcccctaaatgaccgctcagtgataaagga 249 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599135 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 31599194 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599195 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 31599254 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599255 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 31599314 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599315 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 31599374 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599375 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 31599434 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599435 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 31599494 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599495 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 31599554 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599555 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 31599605 Score = 605 bits (305), Expect = e-170 Identities = 305/305 (100%) Strand = Plus / Minus Query: 167 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 227 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11509961 Query: 287 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509960 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11509901 Query: 347 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509900 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11509841 Query: 407 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509840 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11509781 Query: 467 tcggc 471 ||||| Sbjct: 11509780 tcggc 11509776 Score = 402 bits (203), Expect = e-109 Identities = 203/203 (100%) Strand = Plus / Minus Query: 269 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411986 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27411927 Query: 329 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411926 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27411867 Query: 389 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411866 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27411807 Query: 449 gaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||| Sbjct: 27411806 gaagcggaagcgagaatgtcggc 27411784 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 183 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 242 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 243 taaaggaggtggggg 257 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 186 gtcgagagggaaacagcccggatcaccagctaaggccc 223 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 85 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 139 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526451 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 33526510 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526511 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 33526570 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526571 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 33526630 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526631 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 33526690 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526691 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 33526750 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526751 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 33526810 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526811 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 33526870 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526871 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 33526921 Score = 355 bits (179), Expect = 8e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 176 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 235 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 236 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 295 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 527865 Query: 296 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527866 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 527925 Query: 356 ctaagcgatctgccgaagctgtgggatgtcaaaat 390 |||||||||||||| |||||||||||||||||||| Sbjct: 527926 ctaagcgatctgccaaagctgtgggatgtcaaaat 527960 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 323 gatcgagcgcccttgcgctgaagatgaacggggctaagcgat 364 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 9371952 gatcgagcacccttgcgctgaagatgaacagggctaagcgat 9371911 Score = 50.1 bits (25), Expect = 0.007 Identities = 62/73 (84%), Gaps = 1/73 (1%) Strand = Plus / Minus Query: 396 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 455 |||||||||| ||||| |||||||||||||| ||| | |||| ||||||| ||||||| Sbjct: 1076778 ggtaggggagtgttccaccttagagggaagccaccacaaaag-tagggtcgatgaagcgg 1076720 Query: 456 aagcgagaatgtc 468 | | ||||||||| Sbjct: 1076719 atgtgagaatgtc 1076707 Score = 48.1 bits (24), Expect = 0.026 Identities = 64/76 (84%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 392 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 451 ||||||| || ||| |||| |||||| | |||||||||||| ||||| |||||||| || Sbjct: 1076893 catcggttggtgagtgttctgccttaaaaggaagcaaccgcaaaagc-agggtcgacaaa 1076835 Query: 452 gcggaagcgagaatgt 467 | ||||| |||||||| Sbjct: 1076834 gtggaagtgagaatgt 1076819
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47090 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 47031 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47030 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 46971 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46970 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 46911 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46910 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 46851 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46850 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 46791 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46790 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 46731 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46730 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 46671 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46670 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 46620
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71648 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 71707 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71708 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 71767 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71768 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 71827 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71828 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 71887 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71888 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 71947 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71948 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 72007 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72008 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 72067 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72068 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 72118
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52526 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 52467 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52466 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 52407 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52406 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 52347 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52346 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 52287 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52286 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 52227 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52226 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 52167 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52166 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 52107 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52106 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 52056
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 479 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 539 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 599 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 600 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 659 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 660 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 719 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 720 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 779 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 780 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 839 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 840 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 890
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 615 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 674 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 675 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 734 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 794 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 854 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 855 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 914 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 915 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 974 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 1034 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1035 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 1085
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 486 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 545 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 605 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 606 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 665 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 666 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 725 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 726 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 785 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 786 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 845 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 846 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 905 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 906 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 956
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 617 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 676 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 677 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 736 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 796 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 856 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 857 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 916 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 917 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 976 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 977 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 1036 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1037 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 1087
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 295 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 296 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 355 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 415 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 475 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 476 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 535 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 536 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 595 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 596 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 655 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 706
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 615 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 674 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 675 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 734 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 794 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 854 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 855 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 914 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 915 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 974 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 1034 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1035 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 1085
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950229 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 19950288 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950289 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 19950348 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950349 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 19950408 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950409 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 19950468 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950469 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 19950528 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950529 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 19950588 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950589 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 19950648 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950649 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 19950699 Score = 926 bits (467), Expect = 0.0 Identities = 470/471 (99%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393859 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 10393918 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393919 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 10393978 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393979 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 10394038 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394039 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 10394098 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394099 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 10394158 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394159 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 10394218 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 10394219 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggagagcgttccgccttagag 10394278 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394279 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 10394329 Score = 926 bits (467), Expect = 0.0 Identities = 470/471 (99%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282517 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 10282458 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282457 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 10282398 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282397 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 10282338 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282337 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 10282278 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282277 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 10282218 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282217 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 10282158 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282157 caatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 10282098 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282097 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 10282047 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 323 gatcgagcgcccttgcgctgaagatgaacggggctaagc 361 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15841752 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15841714 Score = 54.0 bits (27), Expect = 4e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 92 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 151 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 152 tcggccagtgagacgatgggggataagcttcatcgtcgagag 193 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148 Score = 48.1 bits (24), Expect = 0.026 Identities = 51/60 (85%) Strand = Plus / Minus Query: 264 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 323 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736078 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736019
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119058 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 118999 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118998 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 118939 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118938 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 118879 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118878 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 118819 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118818 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 118759 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118758 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 118699 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118698 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 118639 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118638 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 118588 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95981 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 96040 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96041 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 96100 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96101 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 96160 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96161 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 96220 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96221 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 96280 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96281 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 96340 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96341 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 96400 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96401 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 96451
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119250 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 119191 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119190 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 119131 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119130 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 119071 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119070 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 119011 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119010 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 118951 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118950 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 118891 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118890 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 118831 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118830 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 118780 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95644 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 95703 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95704 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 95763 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95764 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 95823 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95824 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 95883 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95884 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 95943 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95944 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 96003 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96004 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 96063 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96064 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 96114
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 926 bits (467), Expect = 0.0 Identities = 470/471 (99%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118031 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 117972 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117971 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 117912 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117911 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 117852 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117851 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 117792 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117791 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 117732 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117731 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 117672 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117671 caatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 117612 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117611 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 117561
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 926 bits (467), Expect = 0.0 Identities = 470/471 (99%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94212 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 94271 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94272 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 94331 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94332 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 94391 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94392 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 94451 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94452 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 94511 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94512 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 94571 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 94572 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggagagcgttccgccttagag 94631 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94632 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 94682
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 926 bits (467), Expect = 0.0 Identities = 470/471 (99%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21043 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 21102 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21103 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 21162 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21163 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 21222 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21223 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 21282 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21283 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 21342 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21343 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 21402 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21403 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 21462 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 21463 ggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 21513 Score = 918 bits (463), Expect = 0.0 Identities = 469/471 (99%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44074 gctagttggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 44015 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44014 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 43955 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43954 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 43895 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43894 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 43835 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43834 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 43775 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43774 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 43715 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43714 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 43655 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 43654 ggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 43604
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 926 bits (467), Expect = 0.0 Identities = 470/471 (99%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57803 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 57744 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57743 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 57684 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57683 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 57624 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57623 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 57564 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57563 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 57504 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57503 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 57444 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57443 caatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 57384 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57383 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 57333
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 926 bits (467), Expect = 0.0 Identities = 470/471 (99%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 704 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 645 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 644 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 585 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 584 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 525 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 465 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 405 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 345 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 344 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 285 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 ggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 234
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 926 bits (467), Expect = 0.0 Identities = 470/471 (99%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28276 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 28335 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28336 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 28395 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28396 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 28455 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28456 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 28515 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28516 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 28575 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28576 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 28635 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 28636 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggagagcgttccgccttagag 28695 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28696 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 28746
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 926 bits (467), Expect = 0.0 Identities = 470/471 (99%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122914 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 122855 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122854 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 122795 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122794 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 122735 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122734 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 122675 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122674 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 122615 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122614 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 122555 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122554 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 122495 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 122494 ggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 122444 Score = 926 bits (467), Expect = 0.0 Identities = 470/471 (99%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99923 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 99982 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99983 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 100042 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100043 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 100102 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100103 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 100162 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100163 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 100222 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100223 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 100282 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100283 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 100342 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 100343 ggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 100393
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 926 bits (467), Expect = 0.0 Identities = 470/471 (99%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 614 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 673 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 674 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 733 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 734 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 793 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 853 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 854 gatagaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 913 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 914 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 973 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 974 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 1033 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1034 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 1084
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 926 bits (467), Expect = 0.0 Identities = 470/471 (99%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 297 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 298 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 357 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 417 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 477 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 478 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 537 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 538 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 597 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 657 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 658 ggaagcaaccgcgaaagcgggggttgacgaagcggaagcgagaatgtcggc 708
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 926 bits (467), Expect = 0.0 Identities = 470/471 (99%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123631 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 123572 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123571 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 123512 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123511 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 123452 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123451 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 123392 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123391 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 123332 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123331 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 123272 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123271 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 123212 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 123211 ggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 123161 Score = 926 bits (467), Expect = 0.0 Identities = 470/471 (99%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100600 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 100659 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100660 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 100719 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100720 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 100779 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100780 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 100839 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100840 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 100899 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100900 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 100959 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100960 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 101019 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 101020 ggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 101070
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 862 bits (435), Expect = 0.0 Identities = 464/471 (98%), Gaps = 2/471 (0%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122854 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 122795 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 122794 aagcactgtttcggtgcgg-ctgcgcgagcggtaccaaatcgaggcaaactctgaatact 122736 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122735 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 122676 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 122675 tcatcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccgctcagt 122616 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 122615 gataaaggaggtgggggtgcaaagacagccatgaggtttgcctagaagcagccacccttt 122556 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 122555 aaagagtgcgtaatagctcactga-ctggcgcccttgcgctgaagatgaacggggctaag 122497 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122496 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 122437 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 122436 ggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 122386 Score = 862 bits (435), Expect = 0.0 Identities = 464/471 (98%), Gaps = 2/471 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99883 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 99942 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 99943 aagcactgtttcggtgcgg-ctgcgcgagcggtaccaaatcgaggcaaactctgaatact 100001 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100002 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 100061 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 100062 tcatcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccgctcagt 100121 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 100122 gataaaggaggtgggggtgcaaagacagccatgaggtttgcctagaagcagccacccttt 100181 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 100182 aaagagtgcgtaatagctcactga-ctggcgcccttgcgctgaagatgaacggggctaag 100240 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100241 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 100300 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 100301 ggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 100351
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 862 bits (435), Expect = 0.0 Identities = 464/471 (98%), Gaps = 2/471 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6236 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 6295 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 6296 aagcactgtttcggtgcgg-ctgcgcgagcggtaccaaatcgaggcaaactctgaatact 6354 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6355 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 6414 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 6415 tcatcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccgctcagt 6474 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 6475 gataaaggaggtgggggtgcaaagacagccatgaggtttgcctagaagcagccacccttt 6534 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 6535 aaagagtgcgtaatagctcactga-ctggcgcccttgcgctgaagatgaacggggctaag 6593 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6594 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 6653 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 6654 ggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 6704
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 862 bits (435), Expect = 0.0 Identities = 464/471 (98%), Gaps = 2/471 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 824 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 883 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 884 aagcactgtttcggtgcgg-ctgcgcgagcggtaccaaatcgaggcaaactctgaatact 942 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 943 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 1002 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1003 tcatcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccgctcagt 1062 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1063 gataaaggaggtgggggtgcaaagacagccatgaggtttgcctagaagcagccacccttt 1122 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 1123 aaagagtgcgtaatagctcactga-ctggcgcccttgcgctgaagatgaacggggctaag 1181 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1182 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 1241 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1242 ggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 1292
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 841 bits (424), Expect = 0.0 Identities = 424/424 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 495 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 496 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 555 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 556 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 615 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 616 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 675 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 676 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 735 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 736 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 795 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 855 Query: 421 ggaa 424 |||| Sbjct: 856 ggaa 859
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 807 bits (407), Expect = 0.0 Identities = 455/471 (96%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 811 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 870 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 871 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 930 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 931 agatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagct 990 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 991 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 1050 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1051 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 1110 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1111 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 1170 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1171 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaggg 1230 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 1231 ggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgtcggc 1281
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 807 bits (407), Expect = 0.0 Identities = 455/471 (96%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132186 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 132127 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 132126 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 132067 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 132066 agatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagct 132007 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132006 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 131947 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 131946 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 131887 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 131886 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 131827 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 131826 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaggg 131767 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 131766 ggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgtcggc 131716 Score = 807 bits (407), Expect = 0.0 Identities = 455/471 (96%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104578 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 104637 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 104638 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 104697 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 104698 agatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagct 104757 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104758 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 104817 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 104818 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 104877 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 104878 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 104937 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 104938 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaggg 104997 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 104998 ggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgtcggc 105048
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 807 bits (407), Expect = 0.0 Identities = 455/471 (96%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133147 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 133088 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 133087 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 133028 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 133027 agatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagct 132968 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132967 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 132908 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 132907 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 132848 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 132847 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 132788 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 132787 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaggg 132728 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 132727 ggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgtcggc 132677 Score = 807 bits (407), Expect = 0.0 Identities = 455/471 (96%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105502 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 105561 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 105562 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 105621 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 105622 agatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagct 105681 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105682 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 105741 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 105742 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 105801 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 105802 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 105861 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 105862 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaggg 105921 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 105922 ggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgtcggc 105972
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 799 bits (403), Expect = 0.0 Identities = 454/471 (96%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138692 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 138633 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 138632 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 138573 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 138572 agatatgacctcaaaataacaggggtcgaggtcggccagtgagacgatgggggataagct 138513 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138512 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 138453 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 138452 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 138393 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 138392 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 138333 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 138332 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttaggg 138273 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||| ||||| |||||| || |||||||||||||||||||||||||| Sbjct: 138272 ggaagcacccgcgtgagcgggagtagacgaagcggaagcgagaatgtcggc 138222 Score = 799 bits (403), Expect = 0.0 Identities = 454/471 (96%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110405 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 110464 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 110465 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 110524 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 110525 agatatgacctcaaaataacaggggtcgaggtcggccagtgagacgatgggggataagct 110584 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110585 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 110644 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 110645 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 110704 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 110705 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 110764 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 110765 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttaggg 110824 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||| ||||| |||||| || |||||||||||||||||||||||||| Sbjct: 110825 ggaagcacccgcgtgagcgggagtagacgaagcggaagcgagaatgtcggc 110875
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 799 bits (403), Expect = 0.0 Identities = 454/471 (96%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141295 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 141236 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 141235 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 141176 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 141175 agatatgaccccaaaataacaggggtaaaggtcggccagtgagacgatgggggataagct 141116 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141115 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 141056 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 141055 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 140996 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 140995 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 140936 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 140935 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttagag 140876 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||| ||||| ||| || || |||||||||||||||||||||||||| Sbjct: 140875 tgaagcacccgcgcgagcaggtgtggacgaagcggaagcgagaatgtcggc 140825 Score = 799 bits (403), Expect = 0.0 Identities = 454/471 (96%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112362 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 112421 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 112422 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 112481 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 112482 agatatgaccccaaaataacaggggtaaaggtcggccagtgagacgatgggggataagct 112541 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112542 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 112601 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 112602 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 112661 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 112662 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 112721 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 112722 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttagag 112781 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||| ||||| ||| || || |||||||||||||||||||||||||| Sbjct: 112782 tgaagcacccgcgcgagcaggtgtggacgaagcggaagcgagaatgtcggc 112832
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 799 bits (403), Expect = 0.0 Identities = 454/471 (96%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138897 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 138838 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 138837 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 138778 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 138777 agatatgacctccaaataataggggtcaaggtcggccagtgagacgatgggggataagct 138718 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138717 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 138658 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 138657 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 138598 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 138597 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 138538 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 138537 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 138478 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||| |||||| ||| ||||| |||||||||||||||||||||||||| Sbjct: 138477 ggaagcacccgcgagagcaggggtggacgaagcggaagcgagaatgtcggc 138427 Score = 799 bits (403), Expect = 0.0 Identities = 454/471 (96%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110402 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 110461 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 110462 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 110521 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 110522 agatatgacctccaaataataggggtcaaggtcggccagtgagacgatgggggataagct 110581 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110582 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 110641 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 110642 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 110701 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 110702 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 110761 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 110762 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 110821 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||| |||||| ||| ||||| |||||||||||||||||||||||||| Sbjct: 110822 ggaagcacccgcgagagcaggggtggacgaagcggaagcgagaatgtcggc 110872
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 797 bits (402), Expect = 0.0 Identities = 454/471 (96%), Gaps = 4/471 (0%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127051 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 126992 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 126991 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 126932 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 126931 agatatgaccccaaa----caggggtcaaggtcggccagtgagacgatgggggataagct 126876 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126875 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 126816 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 126815 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 126756 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 126755 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 126696 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126695 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 126636 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||| ||||| |||| || || |||||||||||||||||||||||||| Sbjct: 126635 ggaagcacccgcgcaagcaggtgtggacgaagcggaagcgagaatgtcggc 126585 Score = 797 bits (402), Expect = 0.0 Identities = 454/471 (96%), Gaps = 4/471 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107871 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 107930 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 107931 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 107990 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 107991 agatatgaccccaaa----caggggtcaaggtcggccagtgagacgatgggggataagct 108046 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108047 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 108106 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 108107 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 108166 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 108167 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 108226 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108227 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 108286 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||| ||||| |||| || || |||||||||||||||||||||||||| Sbjct: 108287 ggaagcacccgcgcaagcaggtgtggacgaagcggaagcgagaatgtcggc 108337
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 791 bits (399), Expect = 0.0 Identities = 453/471 (96%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130855 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 130796 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 130795 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 130736 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130735 agatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 130676 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130675 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 130616 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 130615 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 130556 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 130555 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 130496 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 130495 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 130436 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||| ||||| ||||| || |||||||||||||||||||||||||| Sbjct: 130435 tgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggc 130385 Score = 791 bits (399), Expect = 0.0 Identities = 453/471 (96%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103780 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 103839 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 103840 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 103899 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103900 agatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 103959 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103960 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 104019 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 104020 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 104079 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 104080 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 104139 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 104140 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 104199 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||| ||||| ||||| || |||||||||||||||||||||||||| Sbjct: 104200 tgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggc 104250
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 785 bits (396), Expect = 0.0 Identities = 450/468 (96%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 809 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 868 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 869 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 928 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 929 agatatgacctcaaaataacaggggttaaggtcggccagtgagacgatgggggataagct 988 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 989 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 1048 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1049 gataaaggaggtaggggtgcaaagacagccaggaggtttgcctagaagcagccacccttg 1108 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1109 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 1168 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| || Sbjct: 1169 cgatctgccgaagctgtgggatgtaaaaatgcatccgtaggggagcgttccgccttaaag 1228 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtc 468 ||||||||||||| ||| |||| |||||||||||||||| |||||| Sbjct: 1229 ggaagcaaccgcgccagcaagggtggacgaagcggaagcgaaaatgtc 1276
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 783 bits (395), Expect = 0.0 Identities = 452/471 (95%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131963 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 131904 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 131903 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 131844 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131843 agatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 131784 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 131783 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 131724 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 131723 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 131664 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 131663 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 131604 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 131603 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 131544 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||| ||||| ||||| || |||||||||||||||||||||||||| Sbjct: 131543 tgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggc 131493 Score = 783 bits (395), Expect = 0.0 Identities = 452/471 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104915 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 104974 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 104975 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 105034 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105035 agatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 105094 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 105095 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 105154 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 105155 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 105214 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 105215 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 105274 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 105275 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 105334 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||| ||||| ||||| || |||||||||||||||||||||||||| Sbjct: 105335 tgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggc 105385
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 783 bits (395), Expect = 0.0 Identities = 452/471 (95%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135089 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 135030 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 135029 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 134970 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134969 agatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 134910 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134909 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 134850 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 134849 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 134790 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 134789 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 134730 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 134729 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttagag 134670 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||| | ||| ||| | || |||||||||||||||||||||||||| Sbjct: 134669 ggaagcacctgcgcgagcagttgtggacgaagcggaagcgagaatgtcggc 134619 Score = 783 bits (395), Expect = 0.0 Identities = 452/471 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106817 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 106876 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 106877 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 106936 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106937 agatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 106996 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106997 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 107056 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 107057 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 107116 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 107117 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 107176 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 107177 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttagag 107236 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||| | ||| ||| | || |||||||||||||||||||||||||| Sbjct: 107237 ggaagcacctgcgcgagcagttgtggacgaagcggaagcgagaatgtcggc 107287
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 783 bits (395), Expect = 0.0 Identities = 452/471 (95%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135780 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 135721 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 135720 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 135661 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135660 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 135601 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135600 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 135541 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135540 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 135481 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 135480 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 135421 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 135420 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 135361 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| | ||||| ||||| || |||||||||||||||||||||||||| Sbjct: 135360 ggaagtacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggc 135310 Score = 783 bits (395), Expect = 0.0 Identities = 452/471 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106645 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 106704 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 106705 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 106764 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106765 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 106824 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106825 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 106884 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106885 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 106944 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 106945 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 107004 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 107005 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 107064 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| | ||||| ||||| || |||||||||||||||||||||||||| Sbjct: 107065 ggaagtacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggc 107115
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 783 bits (395), Expect = 0.0 Identities = 452/471 (95%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135368 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 135309 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 135308 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 135249 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135248 agatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 135189 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135188 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 135129 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135128 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 135069 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 135068 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 135009 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 135008 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttagag 134949 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||| | ||| ||| | || |||||||||||||||||||||||||| Sbjct: 134948 ggaagcacctgcgcgagcagttgtggacgaagcggaagcgagaatgtcggc 134898 Score = 783 bits (395), Expect = 0.0 Identities = 452/471 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107039 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 107098 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 107099 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 107158 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107159 agatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 107218 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107219 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 107278 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 107279 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 107338 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 107339 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 107398 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 107399 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttagag 107458 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||| | ||| ||| | || |||||||||||||||||||||||||| Sbjct: 107459 ggaagcacctgcgcgagcagttgtggacgaagcggaagcgagaatgtcggc 107509
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 783 bits (395), Expect = 0.0 Identities = 453/471 (96%), Gaps = 1/471 (0%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 133410 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctaggggta 133351 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 133350 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 133291 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 133290 agatatgacccaaaaatcacaggg-tcaaggtcggccagtgagacgatgggggataagct 133232 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133231 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 133172 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 133171 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagccgccacccttg 133112 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 133111 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 133052 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 133051 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttagag 132992 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||| ||||| |||| || || |||||||||||||||||||||||||| Sbjct: 132991 agaagcacccgcgcaagcaggtgtggacgaagcggaagcgagaatgtcggc 132941 Score = 783 bits (395), Expect = 0.0 Identities = 453/471 (96%), Gaps = 1/471 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 104561 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctaggggta 104620 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 104621 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 104680 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 104681 agatatgacccaaaaatcacaggg-tcaaggtcggccagtgagacgatgggggataagct 104739 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104740 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 104799 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 104800 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagccgccacccttg 104859 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 104860 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 104919 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 104920 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttagag 104979 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||| ||||| |||| || || |||||||||||||||||||||||||| Sbjct: 104980 agaagcacccgcgcaagcaggtgtggacgaagcggaagcgagaatgtcggc 105030
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 783 bits (395), Expect = 0.0 Identities = 452/471 (95%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131956 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 131897 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 131896 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 131837 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131836 agatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 131777 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 131776 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 131717 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 131716 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 131657 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 131656 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 131597 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 131596 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 131537 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||| ||||| ||||| || |||||||||||||||||||||||||| Sbjct: 131536 tgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggc 131486 Score = 783 bits (395), Expect = 0.0 Identities = 452/471 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104913 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 104972 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 104973 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 105032 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105033 agatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 105092 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 105093 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 105152 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 105153 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 105212 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 105213 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 105272 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 105273 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 105332 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||| ||||| ||||| || |||||||||||||||||||||||||| Sbjct: 105333 tgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggc 105383
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 783 bits (395), Expect = 0.0 Identities = 452/471 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 872 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 873 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 932 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 933 agatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 992 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 1052 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1053 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 1112 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1113 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 1172 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| | Sbjct: 1173 cgatctgccgaagctgtgggatgtaaaaaggcatcggtaggggagcgttccgccttaggg 1232 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||| | ||| ||| | ||| |||||||||||||||||||||||||| Sbjct: 1233 ggaagcacctgcgcgagcagcggtagacgaagcggaagcgagaatgtcggc 1283
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 777 bits (392), Expect = 0.0 Identities = 455/476 (95%), Gaps = 5/476 (1%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138773 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 138714 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 138713 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 138654 Query: 121 agatatgaccc-----aaaaataacaggggtcaaggtcggccagtgagacgatgggggat 175 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138653 agatatgaccccaaaacaaaataacaggggtcaaggtcggccagtgagacgatgggggat 138594 Query: 176 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138593 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 138534 Query: 236 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 295 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 138533 tcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccac 138474 Query: 296 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 355 |||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 138473 ccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgggg 138414 Query: 356 ctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcct 415 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 138413 ctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcct 138354 Query: 416 tagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| |||||| ||||| ||| || || |||||||||||||||||||||||||| Sbjct: 138353 tagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcgagaatgtcggc 138298 Score = 777 bits (392), Expect = 0.0 Identities = 455/476 (95%), Gaps = 5/476 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111172 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 111231 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 111232 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 111291 Query: 121 agatatgaccc-----aaaaataacaggggtcaaggtcggccagtgagacgatgggggat 175 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111292 agatatgaccccaaaacaaaataacaggggtcaaggtcggccagtgagacgatgggggat 111351 Query: 176 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111352 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 111411 Query: 236 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 295 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 111412 tcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccac 111471 Query: 296 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 355 |||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 111472 ccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgggg 111531 Query: 356 ctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcct 415 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 111532 ctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcct 111591 Query: 416 tagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| |||||| ||||| ||| || || |||||||||||||||||||||||||| Sbjct: 111592 tagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcgagaatgtcggc 111647
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 775 bits (391), Expect = 0.0 Identities = 451/471 (95%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135488 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 135429 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 135428 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 135369 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135368 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 135309 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135308 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 135249 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135248 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 135189 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 135188 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 135129 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 135128 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 135069 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 135068 agaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggc 135018 Score = 775 bits (391), Expect = 0.0 Identities = 451/471 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107142 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 107201 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 107202 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 107261 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107262 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 107321 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 107322 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 107381 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 107382 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 107441 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 107442 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 107501 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 107502 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 107561 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 107562 agaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggc 107612
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 775 bits (391), Expect = 0.0 Identities = 451/471 (95%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136126 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 136067 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 136066 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 136007 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 136006 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 135947 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135946 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 135887 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135886 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 135827 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 135826 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 135767 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| || Sbjct: 135766 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttatag 135707 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 135706 agaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggc 135656 Score = 775 bits (391), Expect = 0.0 Identities = 451/471 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107431 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 107490 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 107491 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 107550 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107551 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 107610 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107611 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 107670 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 107671 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 107730 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 107731 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 107790 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| || Sbjct: 107791 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttatag 107850 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 107851 agaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggc 107901
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 775 bits (391), Expect = 0.0 Identities = 451/471 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2336 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 2395 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 2396 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 2455 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2456 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 2515 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2516 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 2575 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2576 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 2635 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 2636 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 2695 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 2696 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 2755 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 2756 agaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggc 2806
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 775 bits (391), Expect = 0.0 Identities = 451/471 (95%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134734 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 134675 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 134674 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 134615 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134614 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 134555 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134554 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 134495 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 134494 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 134435 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 134434 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 134375 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 || ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 134374 cggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 134315 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 134314 agaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggc 134264 Score = 775 bits (391), Expect = 0.0 Identities = 451/471 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 106361 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 106362 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 106421 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106422 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 106481 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 106541 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106542 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 106601 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 106602 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 106661 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 || ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 106662 cggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 106721 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 106722 agaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggc 106772
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 775 bits (391), Expect = 0.0 Identities = 451/471 (95%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134869 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 134810 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 134809 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 134750 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134749 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 134690 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134689 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 134630 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 134629 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 134570 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 134569 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 134510 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 || ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 134509 cggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 134450 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 134449 agaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggc 134399 Score = 775 bits (391), Expect = 0.0 Identities = 451/471 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106474 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 106533 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 106534 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 106593 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106594 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 106653 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106654 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 106713 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106714 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 106773 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 106774 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 106833 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 || ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 106834 cggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 106893 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 106894 agaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggc 106944
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 775 bits (391), Expect = 0.0 Identities = 451/471 (95%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134867 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 134808 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 134807 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 134748 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134747 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 134688 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134687 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 134628 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 134627 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 134568 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 134567 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 134508 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 || ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 134507 cggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 134448 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 134447 agaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggc 134397 Score = 775 bits (391), Expect = 0.0 Identities = 451/471 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106471 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 106530 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 106531 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 106590 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106591 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 106650 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106651 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 106710 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106711 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 106770 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 106771 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 106830 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 || ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 106831 cggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 106890 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 106891 agaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggc 106941
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 775 bits (391), Expect = 0.0 Identities = 451/471 (95%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134779 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 134720 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 134719 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 134660 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134659 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 134600 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134599 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 134540 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 134539 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 134480 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 134479 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 134420 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 || ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 134419 cggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 134360 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 134359 agaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggc 134309 Score = 775 bits (391), Expect = 0.0 Identities = 451/471 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106349 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 106408 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 106409 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 106468 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106469 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 106528 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106529 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 106588 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106589 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 106648 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 106649 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 106708 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 || ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 106709 cggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 106768 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 106769 agaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggc 106819
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 775 bits (391), Expect = 0.0 Identities = 451/471 (95%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135486 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 135427 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 135426 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 135367 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135366 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 135307 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135306 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 135247 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135246 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 135187 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 135186 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 135127 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 135126 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 135067 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 135066 agaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggc 135016 Score = 775 bits (391), Expect = 0.0 Identities = 451/471 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107140 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 107199 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 107200 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 107259 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107260 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 107319 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 107320 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 107379 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 107380 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 107439 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 107440 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 107499 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 107500 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 107559 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 107560 agaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggc 107610
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 775 bits (391), Expect = 0.0 Identities = 451/471 (95%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135217 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 135158 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 135157 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 135098 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135097 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 135038 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135037 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 134978 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 134977 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 134918 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 134917 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 134858 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 134857 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 134798 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 134797 agaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggc 134747 Score = 775 bits (391), Expect = 0.0 Identities = 451/471 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106921 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 106980 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 106981 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 107040 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107041 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 107100 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 107101 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 107160 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 107161 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 107220 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 107221 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 107280 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 107281 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 107340 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 107341 agaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggc 107391
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 775 bits (391), Expect = 0.0 Identities = 451/471 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 909 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 968 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 969 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 1028 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1029 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 1088 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1089 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 1148 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1149 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 1208 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1209 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 1268 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 1269 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 1328 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 1329 agaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggc 1379
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 767 bits (387), Expect = 0.0 Identities = 450/471 (95%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142067 gctagctcgttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 142008 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 142007 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 141948 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 141947 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 141888 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 141887 tgatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 141828 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141827 gataaaggaggtaggggtgcaaagacagccaggaggtttgcctagaagcagccacccttg 141768 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 141767 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 141708 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 141707 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 141648 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 141647 agaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggc 141597 Score = 767 bits (387), Expect = 0.0 Identities = 450/471 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111261 gctagctcgttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 111320 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 111321 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 111380 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 111381 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 111440 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 111441 tgatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagt 111500 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111501 gataaaggaggtaggggtgcaaagacagccaggaggtttgcctagaagcagccacccttg 111560 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 111561 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 111620 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 111621 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 111680 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 111681 agaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggc 111731
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 767 bits (387), Expect = 0.0 Identities = 450/471 (95%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134746 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 134687 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| | Sbjct: 134686 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaataat 134627 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134626 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 134567 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134566 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 134507 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 134506 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 134447 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 134446 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 134387 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 || ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 134386 cggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 134327 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 134326 agaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggc 134276 Score = 767 bits (387), Expect = 0.0 Identities = 450/471 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106316 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 106375 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| | Sbjct: 106376 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaataat 106435 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106436 agatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagct 106495 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106496 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 106555 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106556 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 106615 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 106616 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 106675 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 || ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 106676 cggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 106735 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 106736 agaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggc 106786
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 759 bits (383), Expect = 0.0 Identities = 450/471 (95%), Gaps = 1/471 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2582 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 2641 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 2642 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 2701 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 ||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2702 agatatgactcaaaa-taacaggggtcaaggtcggctagtgagacgatgggggataagct 2760 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2761 tcatcgtcgagagggaaacagtccggatcaccagctaaggcccctaaatgaccgctcagt 2820 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2821 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 2880 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 ||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 2881 aaagagtgcgtaatagcscactgatcgagcgctcttgcgccgaagatgaacggggctaag 2940 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 2941 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagag 3000 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 3001 agaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggc 3051
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 751 bits (379), Expect = 0.0 Identities = 448/471 (95%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 131055 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctaggggta 130996 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 130995 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 130936 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 130935 agatatgacctcaaaataacaagggtcaaggtcggccagtgagacgatgggggataagct 130876 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130875 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 130816 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 130815 gataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagccacccttg 130756 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 130755 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 130696 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||| Sbjct: 130695 cgatctgccgaagctgtgggatgtaaaaaagaatcggtaggggagcgttccgccttagag 130636 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| | ||||| ||| | | | |||||||||||||||||||||||||| Sbjct: 130635 ggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgtcggc 130585 Score = 751 bits (379), Expect = 0.0 Identities = 448/471 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 104339 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctaggggta 104398 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 104399 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 104458 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 104459 agatatgacctcaaaataacaagggtcaaggtcggccagtgagacgatgggggataagct 104518 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104519 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 104578 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 104579 gataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagccacccttg 104638 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 104639 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 104698 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||| Sbjct: 104699 cgatctgccgaagctgtgggatgtaaaaaagaatcggtaggggagcgttccgccttagag 104758 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| | ||||| ||| | | | |||||||||||||||||||||||||| Sbjct: 104759 ggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgtcggc 104809
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 751 bits (379), Expect = 0.0 Identities = 448/471 (95%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129718 gctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggacatctaggggta 129659 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 129658 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 129599 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| ||||||| | ||||||||||||||||||||||||||| |||||||||| Sbjct: 129598 agatatgacctgaaaataataagggtcaaggtcggccagtgagacgatgagggataagct 129539 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 129538 tcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagt 129479 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 129478 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 129419 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 129418 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 129359 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 129358 cgatctgccgaagctgtgggatgtaaaaatgaatcggtaggggagcgttccgccttagag 129299 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| | ||||| ||| | ||| |||||||||||||||||||||||||| Sbjct: 129298 ggaagtacccgcgcgagcagtggtggacgaagcggaagcgagaatgtcggc 129248 Score = 751 bits (379), Expect = 0.0 Identities = 448/471 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102738 gctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggacatctaggggta 102797 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 102798 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 102857 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| ||||||| | ||||||||||||||||||||||||||| |||||||||| Sbjct: 102858 agatatgacctgaaaataataagggtcaaggtcggccagtgagacgatgagggataagct 102917 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 102918 tcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagt 102977 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 102978 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 103037 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 103038 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 103097 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 103098 cgatctgccgaagctgtgggatgtaaaaatgaatcggtaggggagcgttccgccttagag 103157 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| | ||||| ||| | ||| |||||||||||||||||||||||||| Sbjct: 103158 ggaagtacccgcgcgagcagtggtggacgaagcggaagcgagaatgtcggc 103208
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 741 bits (374), Expect = 0.0 Identities = 377/378 (99%) Strand = Plus / Minus Query: 94 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 153 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 154 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 214 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 340 Query: 274 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 280 Query: 334 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 220 Query: 394 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 453 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 219 tcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagc 160 Query: 454 ggaagcgagaatgtcggc 471 |||||||||||||||||| Sbjct: 159 ggaagcgagaatgtcggc 142
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 739 bits (373), Expect = 0.0 Identities = 406/417 (97%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 832 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 891 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 892 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 951 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 952 agatatgacctcaaaataacaggggttaaggtcggccagtgagacgatgggggataagct 1011 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1012 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 1071 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1072 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 1131 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1132 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 1191 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcctta 417 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1192 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcctta 1248
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 731 bits (369), Expect = 0.0 Identities = 446/471 (94%), Gaps = 8/471 (1%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134172 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 134113 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 134112 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 134053 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||| || ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134052 agatatgatcccaaa-------gggtcaaggtcggccagtgagacgatgggggataagct 134000 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133999 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 133940 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 133939 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 133880 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 133879 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 133820 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 133819 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccg-cttagag 133761 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||| ||||| ||| || || |||||||||||||||||||||||||| Sbjct: 133760 ggaagctcccgcgcgagcaggtgtggacgaagcggaagcgagaatgtcggc 133710 Score = 731 bits (369), Expect = 0.0 Identities = 446/471 (94%), Gaps = 8/471 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106110 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 106169 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 106170 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 106229 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||| || ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106230 agatatgatcccaaa-------gggtcaaggtcggccagtgagacgatgggggataagct 106282 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106283 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 106342 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106343 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 106402 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 106403 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 106462 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 106463 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccg-cttagag 106521 Query: 421 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||| ||||| ||| || || |||||||||||||||||||||||||| Sbjct: 106522 ggaagctcccgcgcgagcaggtgtggacgaagcggaagcgagaatgtcggc 106572
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 714 bits (360), Expect = 0.0 Identities = 445/472 (94%), Gaps = 1/472 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1307 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 1366 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 1367 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 1426 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg-ataagc 179 |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1427 agatatgacctccaaataacaggggtcaaggtcggccagtgagacgatggggggataagc 1486 Query: 180 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1487 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 1546 Query: 240 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 299 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1547 tgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccaccctt 1606 Query: 300 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 359 |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 1607 gaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaa 1666 Query: 360 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 419 ||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| Sbjct: 1667 gcgatctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcgttccgtgttagg 1726 Query: 420 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||| | ||| ||| | |||||||||||||||||||||||||| Sbjct: 1727 gggaagcatcggcgcgagccatgccagacgaagcggaagcgagaatgtcggc 1778
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 714 bits (360), Expect = 0.0 Identities = 360/360 (100%) Strand = Plus / Plus Query: 112 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 172 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 232 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 180 Query: 292 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 240 Query: 352 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 300 Query: 412 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 360
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 706 bits (356), Expect = 0.0 Identities = 398/412 (96%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130979 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 130920 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 130919 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 130860 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130859 agatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 130800 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130799 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 130740 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 130739 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 130680 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 130679 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 130620 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 412 || ||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 130619 cggtctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcgttccg 130568 Score = 706 bits (356), Expect = 0.0 Identities = 398/412 (96%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102466 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 102525 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 102526 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 102585 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102586 agatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 102645 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102646 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 102705 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 102706 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 102765 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 102766 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 102825 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 412 || ||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 102826 cggtctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcgttccg 102877 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 446 gacgaagcggaagcgagaatgtcggc 471 |||||||||||||||||||||||||| Sbjct: 130534 gacgaagcggaagcgagaatgtcggc 130509 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 446 gacgaagcggaagcgagaatgtcggc 471 |||||||||||||||||||||||||| Sbjct: 102911 gacgaagcggaagcgagaatgtcggc 102936
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 698 bits (352), Expect = 0.0 Identities = 444/472 (94%), Gaps = 2/472 (0%) Strand = Plus / Plus Query: 1 gctagctggttctcccc-gaaatgcgttgaggcgcagcagttgactggacatctaggggt 59 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 828 gctagctggttctcccccgaaatgcgttgaggcgcagcagttgactggacatctaggggt 887 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 888 aaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 947 Query: 120 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 179 ||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 948 tagatatgacctaaaaataacaagggtcaaggtcggcaagtgagacgatgggggataagc 1007 Query: 180 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 239 ||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||| Sbjct: 1008 ttcatcgtcgagagggaaacagccctgatcacccgctaaggcccctaaatgatcgctcag 1067 Query: 240 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 299 ||||||||||||| |||||||| |||||||||||||||||| ||| |||||||||||||| Sbjct: 1068 tgataaaggaggtaggggtgcagagacagccaggaggtttg-ctataagcagccaccctt 1126 Query: 300 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 359 |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 1127 gaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaa 1186 Query: 360 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 419 | ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||| Sbjct: 1187 gtgatctgccgaagctgtgggatgtaaaaaggcatcggtaggggagcgttccgtcttagg 1246 Query: 420 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||| | ||| ||| | ||| |||||||||||||||||||||||||| Sbjct: 1247 gggaagcacctgcgcgagcagtggtagacgaagcggaagcgagaatgtcggc 1298
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 698 bits (352), Expect = 0.0 Identities = 406/424 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 820 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 879 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 880 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 939 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 940 agatatgacctcaaaataacaggggttaaggtcggccagtgagacaatgggggataagct 999 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1000 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcaat 1059 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||| Sbjct: 1060 gataaaggaggtaggggtgcacagacagccacgaggtttgcctataagcagccacccttg 1119 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 1120 aaagagtgcgtaatagctcactgatcgagcgctcttgcgcccaagatgaacggggctaaa 1179 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1180 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttcccccttagag 1239 Query: 421 ggaa 424 |||| Sbjct: 1240 ggaa 1243
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 696 bits (351), Expect = 0.0 Identities = 408/427 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 818 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 877 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 878 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 937 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 938 agatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 997 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 998 tcatcgtccagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 1057 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||| Sbjct: 1058 gataaaggaggtaggggtgcagagacagccaggaggtttgcctaaaagcagccacccttg 1117 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 1118 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaaa 1177 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| | Sbjct: 1178 cgatctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcgttccgtgttaggg 1237 Query: 421 ggaagca 427 ||||||| Sbjct: 1238 ggaagca 1244
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 692 bits (349), Expect = 0.0 Identities = 444/473 (93%), Gaps = 2/473 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 814 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 873 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 874 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 933 Query: 120 tagatatgacccaaaaataacagggg-tcaaggtcggccagtgagacgatgggggataag 178 ||||||||| || |||||||||||| | |||||| ||||||||||| ||||||||||| Sbjct: 934 tagatatgatccccaaataacaggggataaaggtcaaccagtgagacggtgggggataag 993 Query: 179 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 238 |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 994 cttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctca 1053 Query: 239 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 ||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1054 gtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagccaccct 1113 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 | |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||| Sbjct: 1114 tgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaacgggacta 1173 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1174 agcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgccttag 1233 Query: 419 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||| | ||| ||| || || |||||||||||||||||||||||||| Sbjct: 1234 agggaagcatcagcgcgagcaggtgtggacgaagcggaagcgagaatgtcggc 1286
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 690 bits (348), Expect = 0.0 Identities = 411/432 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 832 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaagggta 891 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 892 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 951 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 | |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 952 aaatatgacctcaaaataacaggggttaaggtcggccagtgagacgatgggggataagct 1011 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1012 tcatcgtccagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 1071 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||| Sbjct: 1072 gataaaggaggtaggggtgcacagacagccaagaggtttgcctaaaagcagccacccttg 1131 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 ||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1132 aaagagtgcgtaataactcactgatcgagcgctcttgcgccgaagatgaacggggctaag 1191 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||| || Sbjct: 1192 cgatctgccgaagctgtgggatgtaaaaatgcatccgtaggggagcgttcccccttatag 1251 Query: 421 ggaagcaaccgc 432 ||||||| |||| Sbjct: 1252 ggaagcacccgc 1263
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 684 bits (345), Expect = 0.0 Identities = 412/433 (95%), Gaps = 1/433 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 793 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 852 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 853 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 912 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 913 agatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 972 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 973 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgcccagt 1032 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1033 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 1092 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1093 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 1152 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggta-ggggagcgttccgccttaga 419 |||||||||||||||||||||||| |||| |||| ||| ||| ||||||||| |||| Sbjct: 1153 cgatctgccgaagctgtgggatgtaaaaaaacatccgtatgggaagcgttccgtgttagg 1212 Query: 420 gggaagcaaccgc 432 |||||||| |||| Sbjct: 1213 gggaagcatccgc 1225
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 682 bits (344), Expect = 0.0 Identities = 404/424 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 831 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 890 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 891 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 950 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 951 agatatgacctcaaaataacaggggttaaggtcggccagtgagaccatgggggataagct 1010 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1011 tcatcgtccagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 1070 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 1071 gataaaggaggtaggggtgcagagacagccaagaggtttgcctagaagcagccacccttg 1130 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||| Sbjct: 1131 aaagagtgcgtaatagctcactgatccagcgctcttgcgcccaaaatgaacggggctaag 1190 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||| || Sbjct: 1191 cgatctgccgaagctgtgggatgtaaaaatgcatccgtaggggagcgttcccccttaaag 1250 Query: 421 ggaa 424 |||| Sbjct: 1251 ggaa 1254
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 676 bits (341), Expect = 0.0 Identities = 445/480 (92%), Gaps = 16/480 (3%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 139548 gctagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggta 139489 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 139488 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 139429 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||| || || |||| ||||||||||||||||||||||||||||||||||||| Sbjct: 139428 agatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggggataagct 139376 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139375 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 139316 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 139315 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 139256 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 139255 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 139196 Query: 361 cgatctgccgaagctgtgggat-------gtcaaaatgcatcggtaggggagcgttccgc 413 |||||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 139195 cgatctgccgaagctgtgggatgtaaaaagtaaaaatgcatcggtaggggagcgttccgc 139136 Query: 414 cttagagggaagcaaccgcgaaagc--gggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||||||||| ||||| ||| | | || |||||||||||||||||||||||||| Sbjct: 139135 cttagagggaagcacccgcgcgagcaggcgtgtggacgaagcggaagcgagaatgtcggc 139076 Score = 676 bits (341), Expect = 0.0 Identities = 445/480 (92%), Gaps = 16/480 (3%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 110512 gctagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggta 110571 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 110572 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 110631 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||| || || |||| ||||||||||||||||||||||||||||||||||||| Sbjct: 110632 agatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggggataagct 110684 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110685 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 110744 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 110745 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 110804 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 110805 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 110864 Query: 361 cgatctgccgaagctgtgggat-------gtcaaaatgcatcggtaggggagcgttccgc 413 |||||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 110865 cgatctgccgaagctgtgggatgtaaaaagtaaaaatgcatcggtaggggagcgttccgc 110924 Query: 414 cttagagggaagcaaccgcgaaagc--gggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||||||||| ||||| ||| | | || |||||||||||||||||||||||||| Sbjct: 110925 cttagagggaagcacccgcgcgagcaggcgtgtggacgaagcggaagcgagaatgtcggc 110984
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 668 bits (337), Expect = 0.0 Identities = 441/473 (93%), Gaps = 2/473 (0%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 117335 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 117276 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 117275 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 117216 Query: 120 tagatatgacccaaaaataacaggggtcaa-ggtcggccagtgagacgatgggggataag 178 ||||||||| || |||||| ||||| || |||| ||||||||||| ||||||||||| Sbjct: 117215 tagatatgatccccaaataatagggggtaatggtcaaccagtgagacggtgggggataag 117156 Query: 179 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 238 |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 117155 cttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctaa 117096 Query: 239 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 ||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 117095 gtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagccaccct 117036 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 | |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||| Sbjct: 117035 tgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaacgggacta 116976 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 116975 agcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgccttag 116916 Query: 419 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||| | ||| ||| || || |||||||||||||||||||||||||| Sbjct: 116915 agggaagcatcagcgcgagcaggtgtggacgaagcggaagcgagaatgtcggc 116863 Score = 668 bits (337), Expect = 0.0 Identities = 441/473 (93%), Gaps = 2/473 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 90767 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 90826 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 90827 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 90886 Query: 120 tagatatgacccaaaaataacaggggtcaa-ggtcggccagtgagacgatgggggataag 178 ||||||||| || |||||| ||||| || |||| ||||||||||| ||||||||||| Sbjct: 90887 tagatatgatccccaaataatagggggtaatggtcaaccagtgagacggtgggggataag 90946 Query: 179 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 238 |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 90947 cttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctaa 91006 Query: 239 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 ||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 91007 gtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagccaccct 91066 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 | |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||| Sbjct: 91067 tgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaacgggacta 91126 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 91127 agcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgccttag 91186 Query: 419 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||| | ||| ||| || || |||||||||||||||||||||||||| Sbjct: 91187 agggaagcatcagcgcgagcaggtgtggacgaagcggaagcgagaatgtcggc 91239
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 666 bits (336), Expect = 0.0 Identities = 403/424 (95%), Gaps = 1/424 (0%) Strand = Plus / Plus Query: 45 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 104 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 105 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 164 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 165 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 225 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 284 ||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 497 taaatgatcgctcagtgataaaggaggtaggggtgc-gagacagccaggaggtttgccta 555 Query: 285 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 344 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 556 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 615 Query: 345 gatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggga 404 |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 616 gatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggga 675 Query: 405 gcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaa 464 |||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||||||||| Sbjct: 676 gcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaa 735 Query: 465 tgtc 468 |||| Sbjct: 736 tgtc 739 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgtt 27 ||||||||||||||||||||||||||| Sbjct: 272 gctagctggttctccccgaaatgcgtt 298
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 660 bits (333), Expect = 0.0 Identities = 333/333 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 617 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 676 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 677 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 736 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 796 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 856 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 857 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 916 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcc 333 ||||||||||||||||||||||||||||||||| Sbjct: 917 aaagagtgcgtaatagctcactgatcgagcgcc 949
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 656 bits (331), Expect = 0.0 Identities = 355/363 (97%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122394 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 122335 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 122334 aagcactgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactctgaatact 122275 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 ||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||| Sbjct: 122274 agatatgacccaaaaataataggattcaaagtcggccagtgagacgatgggggataagct 122215 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 122214 tcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgctcaat 122155 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122154 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 122095 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 122094 aaagagtgcgtaatagctcactaatcgagcgcccttgcgctgaagatgaacggggctaag 122035 Query: 361 cga 363 ||| Sbjct: 122034 cga 122032
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 656 bits (331), Expect = 0.0 Identities = 355/363 (97%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824935 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 12824876 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 12824875 aagcactgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactctgaatact 12824816 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 ||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||| Sbjct: 12824815 agatatgacccaaaaataataggattcaaagtcggccagtgagacgatgggggataagct 12824756 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 12824755 tcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgctcaat 12824696 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824695 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 12824636 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 12824635 aaagagtgcgtaatagctcactaatcgagcgcccttgcgctgaagatgaacggggctaag 12824576 Query: 361 cga 363 ||| Sbjct: 12824575 cga 12824573
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 652 bits (329), Expect = 0.0 Identities = 439/473 (92%), Gaps = 2/473 (0%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51874 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 51815 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||| |||||||| | | ||||||||||||||||| |||||||||||||||| Sbjct: 51814 aagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatact 51755 Query: 121 aga-tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 179 ||| ||||||| | |||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 51754 agaatatgacctacaaataataggggtaaaggtcggccagtgagacgatgggggataagc 51695 Query: 180 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 51694 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaattgatcgctcag 51635 Query: 240 tgataaaggaggtg-ggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 51634 tgataaaggaggttaggggtgcagagacagccaggaggtttgcctagaagcagccaccct 51575 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 | |||||||||||||||||| ||||||||||||| ||||||| ||| ||||||||||||| Sbjct: 51574 tgaaagagtgcgtaatagcttactgatcgagcgctcttgcgccgaatatgaacggggcta 51515 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 51514 agcgattcgccgaagctgtgggatgtaaaaagacatcggtaggggagcgttccgccttag 51455 Query: 419 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||| | || ||| | ||| |||||||||||||||||||||||||| Sbjct: 51454 agggaagcctctgcacgagcagcggtggacgaagcggaagcgagaatgtcggc 51402 Score = 652 bits (329), Expect = 0.0 Identities = 439/473 (92%), Gaps = 2/473 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37954 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 38013 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||| |||||||| | | ||||||||||||||||| |||||||||||||||| Sbjct: 38014 aagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatact 38073 Query: 121 aga-tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 179 ||| ||||||| | |||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 38074 agaatatgacctacaaataataggggtaaaggtcggccagtgagacgatgggggataagc 38133 Query: 180 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 38134 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaattgatcgctcag 38193 Query: 240 tgataaaggaggtg-ggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 38194 tgataaaggaggttaggggtgcagagacagccaggaggtttgcctagaagcagccaccct 38253 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 | |||||||||||||||||| ||||||||||||| ||||||| ||| ||||||||||||| Sbjct: 38254 tgaaagagtgcgtaatagcttactgatcgagcgctcttgcgccgaatatgaacggggcta 38313 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 38314 agcgattcgccgaagctgtgggatgtaaaaagacatcggtaggggagcgttccgccttag 38373 Query: 419 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||| | || ||| | ||| |||||||||||||||||||||||||| Sbjct: 38374 agggaagcctctgcacgagcagcggtggacgaagcggaagcgagaatgtcggc 38426
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 652 bits (329), Expect = 0.0 Identities = 439/473 (92%), Gaps = 2/473 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 814 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 873 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 874 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 933 Query: 120 tagatatgacccaaaaataacaggggtcaagg-tcggccagtgagacgatgggggataag 178 ||||||||| | |||||| |||| |||| || ||||||||||| ||||||||||| Sbjct: 934 tagatatgatctccgaataacgggggataagggtcaaccagtgagacggtgggggataag 993 Query: 179 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 238 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 994 cttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctca 1053 Query: 239 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 ||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1054 gtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagccaccct 1113 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 | |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||| Sbjct: 1114 tgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaacgggacta 1173 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1174 agcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggggagcgttccgccttag 1233 Query: 419 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||| | ||| ||| || || |||||||||||||||||||||||||| Sbjct: 1234 ggggaagcaccagcgcgagcaggtgtggacgaagcggaagcgagaatgtcggc 1286
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 652 bits (329), Expect = 0.0 Identities = 439/473 (92%), Gaps = 2/473 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4882 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 4941 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||| |||||||| | | ||||||||||||||||| |||||||||||||||| Sbjct: 4942 aagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatact 5001 Query: 121 aga-tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 179 ||| ||||||| | |||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 5002 agaatatgacctacaaataataggggtaaaggtcggccagtgagacgatgggggataagc 5061 Query: 180 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 5062 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaattgatcgctcag 5121 Query: 240 tgataaaggaggtg-ggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 5122 tgataaaggaggttaggggtgcagagacagccaggaggtttgcctagaagcagccaccct 5181 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 | |||||||||||||||||| ||||||||||||| ||||||| ||| ||||||||||||| Sbjct: 5182 tgaaagagtgcgtaatagcttactgatcgagcgctcttgcgccgaatatgaacggggcta 5241 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 5242 agcgattcgccgaagctgtgggatgtaaaaagacatcggtaggggagcgttccgccttag 5301 Query: 419 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||| | || ||| | ||| |||||||||||||||||||||||||| Sbjct: 5302 agggaagcctctgcacgagcagcggtggacgaagcggaagcgagaatgtcggc 5354
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 648 bits (327), Expect = 0.0 Identities = 404/430 (93%), Gaps = 6/430 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 832 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 891 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||| Sbjct: 892 aagcactgtttcggtgcgggccgcgagagcagtaccaaatcgaggcaaactctgaatact 951 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| | |||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 952 agatatgacc------tcacaggggttaaggtcggccaatgagacgatgggggataagct 1005 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1006 tcatcttccagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 1065 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1066 gataaaggaggtaggggtgcaaagacagccacgaggtttgcctagaagcagccacccttg 1125 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| || |||||||||||||| Sbjct: 1126 aaagagtgcgtaatagctcactgatcgagcgctcttgcgcccaaaatgaacggggctaaa 1185 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || || Sbjct: 1186 cgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccctaaag 1245 Query: 421 ggaagcaacc 430 |||| ||||| Sbjct: 1246 ggaaacaacc 1255
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 642 bits (324), Expect = 0.0 Identities = 386/404 (95%), Gaps = 2/404 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177655 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 177714 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 177715 aagcacggtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 177774 Query: 121 agatatgacccaaaaataacaggggt-caaggtcggccagtgagacgatgggggataagc 179 |||||||||| ||||||| ||||| |||||||||| |||||||||||||||||||||| Sbjct: 177775 agatatgacctcaaaataagaggggggcaaggtcggctagtgagacgatgggggataagc 177834 Query: 180 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 239 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 177835 ttcatcgtcgagagggaaagagcccggatcaccagctaaggcccctaaatgaccgctcag 177894 Query: 240 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 299 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 177895 tgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccaccctt 177954 Query: 300 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 359 |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 177955 gaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaa 178014 Query: 360 gcgat-ctgccgaagctgtgggatgtcaaaatgcatcggtaggg 402 ||||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 178015 gcgatcctgccgaagctgtgggatgtcaaaatacatcggcaggg 178058 Score = 48.1 bits (24), Expect = 0.026 Identities = 51/60 (85%) Strand = Plus / Plus Query: 264 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 323 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 419034 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 419093 Score = 48.1 bits (24), Expect = 0.026 Identities = 51/60 (85%) Strand = Plus / Plus Query: 264 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 323 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 68284 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 68343 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 218 aggcccctaaatgaccgctcag 239 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 gtcgagagggaaacagcccggatc 209 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 gtcgagagggaaacagcccggatc 209 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 640 bits (323), Expect = 0.0 Identities = 440/478 (92%), Gaps = 7/478 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 811 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 870 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||| |||||||| | | ||||||||||||||||| |||||||||||||||| Sbjct: 871 aagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatact 930 Query: 121 aga-tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 179 ||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 931 agaatatgacctaaaaataacaggggtaaaggtcggccagtgagacgatgggggataagc 990 Query: 180 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 239 ||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||| Sbjct: 991 ttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaattgatcgctcag 1050 Query: 240 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 299 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1051 tgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccaccctt 1110 Query: 300 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 359 ||| |||||||||||||| ||||||||||||| ||||||| |||||| ||||||||||| Sbjct: 1111 gaaatagtgcgtaatagcttactgatcgagcgctcttgcgccgaagattaacggggctaa 1170 Query: 360 gcgatctgccgaagctgtgggatg------tcaaaatgcatcggtaggggagcgttccgc 413 |||||| ||||||||||||||||| | ||||| |||||||||||||||||||||| Sbjct: 1171 gcgatccgccgaagctgtgggatgtaaaaataaaaatacatcggtaggggagcgttccgc 1230 Query: 414 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||| | || ||| | ||| |||||| ||||||||||||||||||| Sbjct: 1231 cttagagggaagcctctgcacgagcagcggtggacgaaacggaagcgagaatgtcggc 1288
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 630 bits (318), Expect = e-178 Identities = 436/472 (92%), Gaps = 5/472 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 87077 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaccatctaggggt 87136 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 87137 aaagcactgtttcggtacgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 87196 Query: 120 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 179 ||||| || ||| ||||| |||||| | |||| |||||||||||||||||||||||| Sbjct: 87197 tagat-tgcccc---aataaaaggggtaagggtcaaccagtgagacgatgggggataagc 87252 Query: 180 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 239 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 87253 ttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgaccgctcag 87312 Query: 240 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 299 |||| ||||| || | |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 87313 tgatgaaggaagtacgagtgcaaagacagccaggaggtttgcctagaagcagccaacctt 87372 Query: 300 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 359 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||| Sbjct: 87373 gaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgggactaa 87432 Query: 360 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 419 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| Sbjct: 87433 gcgatctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgcctcaga 87492 Query: 420 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 | |||||| | ||| ||| || || |||||||||||||||||||||||||| Sbjct: 87493 gagaagcaccggcgcgagcaggtgtggacgaagcggaagcgagaatgtcggc 87544
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 613 bits (309), Expect = e-172 Identities = 364/383 (95%), Gaps = 7/383 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 297 gctagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggta 356 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 357 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 416 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||| || || |||| ||||||||||||||||||||||||||||||||||||| Sbjct: 417 agatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggggataagct 469 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 529 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 530 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 589 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 590 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 649 Query: 361 cgatctgccgaagctgtgggatg 383 ||||||||||||||||||||||| Sbjct: 650 cgatctgccgaagctgtgggatg 672
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 613 bits (309), Expect = e-172 Identities = 439/478 (91%), Gaps = 7/478 (1%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 145745 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 145686 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 145685 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 145626 Query: 120 tagatatgacc--caaa---aataacagg-ggtcaaggtcggccagtgagacgatggggg 173 ||| ||||| | |||| || |||||| ||| |||||| |||||||||||| |||||| Sbjct: 145625 taggtatgatctccaaatgaaagaacaggaggtaaaggtcagccagtgagacggtggggg 145566 Query: 174 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 233 |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 145565 ataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgacc 145506 Query: 234 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 293 |||||||| | |||||||| || ||||| |||||||||||| |||||||||||||||||| Sbjct: 145505 gctcagtggtgaaggaggtaggagtgcagagacagccaggaagtttgcctagaagcagcc 145446 Query: 294 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 353 |||||| |||||||||||||||||||||||||| ||||| ||||||| ||| |||||||| Sbjct: 145445 acccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaaaatgaacgg 145386 Query: 354 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 413 | ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 145385 gactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggggagcgttccgc 145326 Query: 414 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||||||||| | ||| ||| || || ||| |||||||||||||||||||||| Sbjct: 145325 cttagagggaagcaccagcgcgagcaggtgtggacaaagcggaagcgagaatgtcggc 145268 Score = 613 bits (309), Expect = e-172 Identities = 439/478 (91%), Gaps = 7/478 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 112717 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 112776 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 112777 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 112836 Query: 120 tagatatgacc--caaa---aataacagg-ggtcaaggtcggccagtgagacgatggggg 173 ||| ||||| | |||| || |||||| ||| |||||| |||||||||||| |||||| Sbjct: 112837 taggtatgatctccaaatgaaagaacaggaggtaaaggtcagccagtgagacggtggggg 112896 Query: 174 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 233 |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 112897 ataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgacc 112956 Query: 234 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 293 |||||||| | |||||||| || ||||| |||||||||||| |||||||||||||||||| Sbjct: 112957 gctcagtggtgaaggaggtaggagtgcagagacagccaggaagtttgcctagaagcagcc 113016 Query: 294 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 353 |||||| |||||||||||||||||||||||||| ||||| ||||||| ||| |||||||| Sbjct: 113017 acccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaaaatgaacgg 113076 Query: 354 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 413 | ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 113077 gactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggggagcgttccgc 113136 Query: 414 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||||||||| | ||| ||| || || ||| |||||||||||||||||||||| Sbjct: 113137 cttagagggaagcaccagcgcgagcaggtgtggacaaagcggaagcgagaatgtcggc 113194
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 605 bits (305), Expect = e-170 Identities = 305/305 (100%) Strand = Plus / Minus Query: 167 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63889 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 63830 Query: 227 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63829 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 63770 Query: 287 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63769 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 63710 Query: 347 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63709 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 63650 Query: 407 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63649 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 63590 Query: 467 tcggc 471 ||||| Sbjct: 63589 tcggc 63585
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 597 bits (301), Expect = e-167 Identities = 432/472 (91%), Gaps = 4/472 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 89163 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaccatctaggggt 89222 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||| Sbjct: 89223 aaagcactgtttcggtacgggccacgagagcggtaccaaatcgaggcaaactctgaatac 89282 Query: 120 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 179 ||||| |||| || | || ||||| | |||| |||||||||||||||||||||||| Sbjct: 89283 tagatt--accccaataaaag-ggggtaagggtcaaccagtgagacgatgggggataagc 89339 Query: 180 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 239 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 89340 ttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgaccgctcag 89399 Query: 240 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 299 |||| ||||| || | |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 89400 tgatgaaggaagtacgagtgcaaagacagccaggaggtttgcctagaagcagccaacctt 89459 Query: 300 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 359 |||||||||||||||||||||||||||||||| | ||||| ||||||||||||| |||| Sbjct: 89460 gaaagagtgcgtaatagctcactgatcgagcgctcgtgcgccgaagatgaacgggactaa 89519 Query: 360 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 419 ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||| Sbjct: 89520 gcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcctcaga 89579 Query: 420 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||| | ||| ||| || || |||||||||||||||||||||||||| Sbjct: 89580 gggaagcaccggcgcgagcaggtgtggacgaagcggaagcgagaatgtcggc 89631
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 595 bits (300), Expect = e-167 Identities = 300/300 (100%) Strand = Plus / Plus Query: 172 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 60 Query: 232 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 120 Query: 292 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 180 Query: 352 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 240 Query: 412 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 300
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 585 bits (295), Expect = e-164 Identities = 350/369 (94%), Gaps = 7/369 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 313 gctagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggta 372 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 373 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 432 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||| || || |||| ||||||||||||||||||||||||||||||||||||| Sbjct: 433 agatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggggataagct 485 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 486 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 545 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 546 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 605 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 606 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 665 Query: 361 cgatctgcc 369 ||||||||| Sbjct: 666 cgatctgcc 674
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 573 bits (289), Expect = e-160 Identities = 429/473 (90%), Gaps = 2/473 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 818 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactagactatctaggggt 877 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 878 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 937 Query: 120 tagatatgacccaaaaataacaggg-gtcaaggtcggccagtgagacgatgggggataag 178 | |||| ||| | ||||| || | || | |||| |||||||||| ||||||||||| Sbjct: 938 tggataggactccctaataatagagagtaagggtcaaccagtgagacagtgggggataag 997 Query: 179 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 238 |||||| |||||||||| |||||||| ||||||| ||||||||||||||||||||||| | Sbjct: 998 cttcattgtcgagaggggaacagcccagatcaccggctaaggcccctaaatgaccgctaa 1057 Query: 239 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 ||| |||||||||| || |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1058 gtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagccatcct 1117 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 | |||||||||||||||||||||||||| ||||| ||||||| ||||||||| ||| ||| Sbjct: 1118 tgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaatgggacta 1177 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1178 agcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgccttag 1237 Query: 419 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 | |||||| | ||| ||| || || |||||||||||||||||||||||||| Sbjct: 1238 ggagaagcaccagcgtgagcaggtgtggacgaagcggaagcgagaatgtcggc 1290
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 557 bits (281), Expect = e-155 Identities = 332/349 (95%) Strand = Plus / Minus Query: 123 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 182 ||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| Sbjct: 640 atatgacccaaaaataacacgggtcaaggtcggccagtaagacattgggggaaaagcttc 581 Query: 183 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 242 ||| || || ||||||||||||||| ||||||||||||| |||||||||||||| ||| Sbjct: 580 atcatctcgaaagaaacagcccggatccccagctaaggcccttaaatgaccgctcaatga 521 Query: 243 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 302 |||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 520 taaaggaggtgggggtgcaaagccagccatgaagtttgcctagaagcagccaccctttaa 461 Query: 303 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 401 Query: 363 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 341 Query: 423 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 aagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 292
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 545 bits (275), Expect = e-152 Identities = 389/427 (91%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||| ||||||| |||| |||||||||||||||||||||||||| ||| Sbjct: 3009 gctagctggttctccctgaaatgcattgaagcgcagcagttgactggacatctaggagta 2950 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| | |||| ||||||||| ||||||||||||||||| | Sbjct: 2949 aagcactgtttcggtgcgggcaatgagagcagtaccaaattgaggcaaactctgaatatt 2890 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 ||||| || | ||||| ||| |||||||||||||| |||||||||| | |||||||||| Sbjct: 2889 agatacgatctcaaaatcacaagggtcaaggtcggcgagtgagacgacgagggataagct 2830 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||| Sbjct: 2829 tcatcgtcgagagggaaacaacctggatcaccagctaaggcccctaaatgactgctcagt 2770 Query: 241 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 300 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2769 gataaaggaggtaggggtgcaaagacagccaggaggtttgcctagaagcaaccacccttg 2710 Query: 301 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 360 ||| |||||||||||||||||| ||||||||| ||||| | |||||||| |||||||| Sbjct: 2709 aaaaagtgcgtaatagctcactaatcgagcgcacttgcaccaaagatgaattgggctaag 2650 Query: 361 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 420 ||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2649 cgatctgttgaagctatgggatgtcaaaatgcatcgataggggagcgttccgccttagag 2590 Query: 421 ggaagca 427 ||||||| Sbjct: 2589 ggaagca 2583
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 531 bits (268), Expect = e-148 Identities = 422/472 (89%), Gaps = 1/472 (0%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 |||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||| Sbjct: 127627 gctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggactacctaggggt 127568 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 127567 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatac 127508 Query: 120 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 179 ||| |||||||| || ||| ||| | |||| |||||||||||||||||||||||| Sbjct: 127507 taggtatgacccccgaagaacggggaaaagggtcaaccagtgagacgatgggggataagc 127448 Query: 180 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 239 ||||| |||||||||| |||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 127447 ttcattgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgactgctcag 127388 Query: 240 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 299 || |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127387 tggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagccaccctt 127328 Query: 300 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 359 |||||||||||||||||||||||||| ||||| ||| ||| ||| ||||||||| |||| Sbjct: 127327 aaaagagtgcgtaatagctcactgatcaagcgctcttacgccgaaaatgaacgggactaa 127268 Query: 360 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 419 | | ||||||||||||||| ||||||||| ||||||||||||||||||||| | ||| Sbjct: 127267 gtggtctgccgaagctgtgagatgtcaaaggacatcggtaggggagcgttccgtatcaga 127208 Query: 420 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||| ||| ||| || || |||||||||||||||||||||||||| Sbjct: 127207 aagaagcactagcgtgagcaggtgtggacgaagcggaagcgagaatgtcggc 127156 Score = 531 bits (268), Expect = e-148 Identities = 422/472 (89%), Gaps = 1/472 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 |||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||| Sbjct: 95820 gctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggactacctaggggt 95879 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95880 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatac 95939 Query: 120 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 179 ||| |||||||| || ||| ||| | |||| |||||||||||||||||||||||| Sbjct: 95940 taggtatgacccccgaagaacggggaaaagggtcaaccagtgagacgatgggggataagc 95999 Query: 180 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 239 ||||| |||||||||| |||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 96000 ttcattgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgactgctcag 96059 Query: 240 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 299 || |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96060 tggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagccaccctt 96119 Query: 300 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 359 |||||||||||||||||||||||||| ||||| ||| ||| ||| ||||||||| |||| Sbjct: 96120 aaaagagtgcgtaatagctcactgatcaagcgctcttacgccgaaaatgaacgggactaa 96179 Query: 360 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 419 | | ||||||||||||||| ||||||||| ||||||||||||||||||||| | ||| Sbjct: 96180 gtggtctgccgaagctgtgagatgtcaaaggacatcggtaggggagcgttccgtatcaga 96239 Query: 420 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||| ||| ||| || || |||||||||||||||||||||||||| Sbjct: 96240 aagaagcactagcgtgagcaggtgtggacgaagcggaagcgagaatgtcggc 96291
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 504 bits (254), Expect = e-139 Identities = 257/258 (99%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 727 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 786 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 787 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 846 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 847 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 906 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 907 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 966 Query: 241 gataaaggaggtgggggt 258 |||||||||||| ||||| Sbjct: 967 gataaaggaggtaggggt 984
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 480 bits (242), Expect = e-132 Identities = 309/330 (93%), Gaps = 1/330 (0%) Strand = Plus / Plus Query: 143 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 201 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 202 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 261 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 262 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 321 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 322 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 381 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 382 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 441 ||| |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcagg 5744 Query: 442 ggtcgacgaagcggaagcgagaatgtcggc 471 | | |||||||||||||||||||||||||| Sbjct: 5745 gttggacgaagcggaagcgagaatgtcggc 5774 Score = 236 bits (119), Expect = 5e-59 Identities = 128/131 (97%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5310 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 5369 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 5370 aagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 5429 Query: 121 agatatgaccc 131 ||||||||||| Sbjct: 5430 agatatgaccc 5440
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 480 bits (242), Expect = e-132 Identities = 309/330 (93%), Gaps = 1/330 (0%) Strand = Plus / Plus Query: 143 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 201 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 202 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 261 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 262 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 321 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 322 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 381 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 382 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 441 ||| |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcagg 5744 Query: 442 ggtcgacgaagcggaagcgagaatgtcggc 471 | | |||||||||||||||||||||||||| Sbjct: 5745 gttggacgaagcggaagcgagaatgtcggc 5774 Score = 236 bits (119), Expect = 5e-59 Identities = 128/131 (97%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5310 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 5369 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 5370 aagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 5429 Query: 121 agatatgaccc 131 ||||||||||| Sbjct: 5430 agatatgaccc 5440
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 478 bits (241), Expect = e-132 Identities = 301/321 (93%) Strand = Plus / Plus Query: 151 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 211 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 270 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 5301 Query: 271 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 330 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5302 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 5361 Query: 331 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 390 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 5362 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 5421 Query: 391 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 450 | ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||| Sbjct: 5422 gaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacga 5481 Query: 451 agcggaagcgagaatgtcggc 471 ||||||||||||||||||||| Sbjct: 5482 agcggaagcgagaatgtcggc 5502 Score = 226 bits (114), Expect = 5e-56 Identities = 123/126 (97%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5042 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 5101 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 5102 aagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 5161 Query: 121 agatat 126 |||||| Sbjct: 5162 agatat 5167
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 478 bits (241), Expect = e-132 Identities = 301/321 (93%) Strand = Plus / Minus Query: 151 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 211 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 270 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 22624 Query: 271 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 330 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 22623 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 22564 Query: 331 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 390 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 22563 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 22504 Query: 391 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 450 | ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||| Sbjct: 22503 gaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacga 22444 Query: 451 agcggaagcgagaatgtcggc 471 ||||||||||||||||||||| Sbjct: 22443 agcggaagcgagaatgtcggc 22423 Score = 226 bits (114), Expect = 5e-56 Identities = 123/126 (97%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22883 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 22824 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 22823 aagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 22764 Query: 121 agatat 126 |||||| Sbjct: 22763 agatat 22758
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 470 bits (237), Expect = e-129 Identities = 237/237 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 612 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 671 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 672 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 731 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 732 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 791 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 237 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 792 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 848
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 462 bits (233), Expect = e-127 Identities = 374/419 (89%), Gaps = 9/419 (2%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||| ||||||||||||||||||||| |||||||| |||| || |||||||||||||| Sbjct: 817 gctagttggttctccccgaaatgcgtttaggcgcagaagtt-accagacatctaggggta 875 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||| |||| ||| |||| ||||||||| |||||||||| |||||||| Sbjct: 876 aagcactgtttcggttcgggtcgcgagagccgtaccaaattgaggcaaactatgaatact 935 Query: 121 agatatgacc--caaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 178 |||||||||| |||||||||||||| | ||||| | |||||||||| |||||||||||| Sbjct: 936 agatatgacctccaaaaataacagggataaaggtggaccagtgagaccatgggggataag 995 Query: 179 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 238 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| | Sbjct: 996 cttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgaccgctaa 1055 Query: 239 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||||| Sbjct: 1056 gttataaaggaggtaggggtgcatagacaaccaggaggtttgcctagaagaagccaccct 1115 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 |||||||||||||||||||| ||||||||||||| ||||||| ||| ||||| ||| || Sbjct: 1116 ttaaagagtgcgtaatagctaactgatcgagcgctcttgcgccgaatatgaatgggaata 1175 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcctta 417 ||||| | |||||||||||||||||| | |||||||||||||||||| |||||| Sbjct: 1176 agcgacccgccgaagctgtgggatgtaa------atcggtaggggagcgttctgcctta 1228
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 454 bits (229), Expect = e-124 Identities = 229/229 (100%) Strand = Plus / Plus Query: 243 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 60 Query: 303 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 120 Query: 363 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 180 Query: 423 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 229
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 450 bits (227), Expect = e-123 Identities = 419/479 (87%), Gaps = 8/479 (1%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||||| ||||||| | | | || | ||| Sbjct: 138454 gctagctggttctccccgaaatgcgttgaggcgcagcggttgactaggctacctggaggt 138395 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 ||||||||||| |||||||||||||| |||| |||||||| ||||||||||||||||||| Sbjct: 138394 aaagcactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaaactctgaatac 138335 Query: 120 tagatatgacccaaaaataacagg--ggtcaaggtcggccagtgagacgatgggggataa 177 | | |||| ||| | | | ||| | ||| ||||||||||||||||||| |||||||||| Sbjct: 138334 tgggtatggccccagagtcacacgagggtgaaggtcggccagtgagacggtgggggataa 138275 Query: 178 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 237 |||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||| Sbjct: 138274 gcttcaccgtcgagaggggaacagcccagatcaccagctaaggcccctgaatgaccgctc 138215 Query: 238 agtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccc 297 |||| | |||||||| || |||||||||||||| ||||||||||| |||||||||||||| Sbjct: 138214 agtggtgaaggaggtaggagtgcaaagacagccgggaggtttgcccagaagcagccaccc 138155 Query: 298 tttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggct 357 || |||||||||||| ||||||||||||| ||||| | ||||| || |||||||||| || Sbjct: 138154 ttgaaagagtgcgtagtagctcactgatcaagcgctcctgcgccgaggatgaacgggact 138095 Query: 358 aagcgatctgccgaagctgtgggatgtc--aaaatgcatcggtaggggagcgttccgcct 415 ||||| |||||||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 138094 aagcggtctgccgaagctgtgggatgtcgaacaatacatcggtaggggagcgttccgcct 138035 Query: 416 ---tagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||||| | ||| ||| || | |||||||||||||||||| ||||||| Sbjct: 138034 cggaggagggaagcaccagcgcgagcaggtgcggacgaagcggaagcgagagtgtcggc 137976 Score = 450 bits (227), Expect = e-123 Identities = 419/479 (87%), Gaps = 8/479 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||||| ||||||| | | | || | ||| Sbjct: 83423 gctagctggttctccccgaaatgcgttgaggcgcagcggttgactaggctacctggaggt 83482 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 ||||||||||| |||||||||||||| |||| |||||||| ||||||||||||||||||| Sbjct: 83483 aaagcactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaaactctgaatac 83542 Query: 120 tagatatgacccaaaaataacagg--ggtcaaggtcggccagtgagacgatgggggataa 177 | | |||| ||| | | | ||| | ||| ||||||||||||||||||| |||||||||| Sbjct: 83543 tgggtatggccccagagtcacacgagggtgaaggtcggccagtgagacggtgggggataa 83602 Query: 178 gcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 237 |||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||| Sbjct: 83603 gcttcaccgtcgagaggggaacagcccagatcaccagctaaggcccctgaatgaccgctc 83662 Query: 238 agtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccc 297 |||| | |||||||| || |||||||||||||| ||||||||||| |||||||||||||| Sbjct: 83663 agtggtgaaggaggtaggagtgcaaagacagccgggaggtttgcccagaagcagccaccc 83722 Query: 298 tttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggct 357 || |||||||||||| ||||||||||||| ||||| | ||||| || |||||||||| || Sbjct: 83723 ttgaaagagtgcgtagtagctcactgatcaagcgctcctgcgccgaggatgaacgggact 83782 Query: 358 aagcgatctgccgaagctgtgggatgtc--aaaatgcatcggtaggggagcgttccgcct 415 ||||| |||||||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 83783 aagcggtctgccgaagctgtgggatgtcgaacaatacatcggtaggggagcgttccgcct 83842 Query: 416 ---tagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||||| | ||| ||| || | |||||||||||||||||| ||||||| Sbjct: 83843 cggaggagggaagcaccagcgcgagcaggtgcggacgaagcggaagcgagagtgtcggc 83901
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 448 bits (226), Expect = e-123 Identities = 298/322 (92%) Strand = Plus / Plus Query: 150 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 209 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 210 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 269 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 4977 Query: 270 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 329 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 4978 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 5037 Query: 330 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 389 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 5038 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 5097 Query: 390 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 449 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 5098 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 5157 Query: 450 aagcggaagcgagaatgtcggc 471 |||||||||||||||||||||| Sbjct: 5158 aagcggaagcgagaatgtcggc 5179 Score = 222 bits (112), Expect = 8e-55 Identities = 125/128 (97%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4703 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 4762 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4763 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 4822 Query: 120 tagatatg 127 ||| |||| Sbjct: 4823 taggtatg 4830
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 448 bits (226), Expect = e-123 Identities = 281/298 (94%), Gaps = 1/298 (0%) Strand = Plus / Plus Query: 174 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 316 Query: 234 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 293 ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 317 gctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcc 376 Query: 294 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 353 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 377 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 436 Query: 354 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 413 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 437 ggctaagcgatctgccgaagctgtgggatgtcaaaatgaatcggtagggga-cgttccgc 495 Query: 414 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||| |||||| | ||||| ||| | | | |||||||||||||||||||||||||| Sbjct: 496 cttagggggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgtcggc 553
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 448 bits (226), Expect = e-123 Identities = 298/322 (92%) Strand = Plus / Plus Query: 150 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 209 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 210 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 269 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 270 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 329 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 330 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 389 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 390 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 449 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 1208 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 1267 Query: 450 aagcggaagcgagaatgtcggc 471 |||||||||||||||||||||| Sbjct: 1268 aagcggaagcgagaatgtcggc 1289 Score = 222 bits (112), Expect = 8e-55 Identities = 125/128 (97%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 813 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 872 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 873 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 932 Query: 120 tagatatg 127 ||| |||| Sbjct: 933 taggtatg 940
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 448 bits (226), Expect = e-123 Identities = 298/322 (92%) Strand = Plus / Minus Query: 150 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 209 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 210 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 269 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 150158 Query: 270 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 329 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 150157 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 150098 Query: 330 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 389 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 150097 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 150038 Query: 390 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 449 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 150037 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 149978 Query: 450 aagcggaagcgagaatgtcggc 471 |||||||||||||||||||||| Sbjct: 149977 aagcggaagcgagaatgtcggc 149956 Score = 448 bits (226), Expect = e-123 Identities = 298/322 (92%) Strand = Plus / Plus Query: 150 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 209 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 210 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 269 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 118508 Query: 270 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 329 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 118509 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 118568 Query: 330 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 389 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 118569 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 118628 Query: 390 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 449 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 118629 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 118688 Query: 450 aagcggaagcgagaatgtcggc 471 |||||||||||||||||||||| Sbjct: 118689 aagcggaagcgagaatgtcggc 118710 Score = 222 bits (112), Expect = 8e-55 Identities = 125/128 (97%), Gaps = 1/128 (0%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 150432 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 150373 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 150372 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 150313 Query: 120 tagatatg 127 ||| |||| Sbjct: 150312 taggtatg 150305 Score = 222 bits (112), Expect = 8e-55 Identities = 125/128 (97%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 118234 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 118293 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 118294 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 118353 Query: 120 tagatatg 127 ||| |||| Sbjct: 118354 taggtatg 118361
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 448 bits (226), Expect = e-123 Identities = 298/322 (92%) Strand = Plus / Plus Query: 150 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 209 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 210 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 269 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 270 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 329 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 330 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 389 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 390 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 449 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 1208 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 1267 Query: 450 aagcggaagcgagaatgtcggc 471 |||||||||||||||||||||| Sbjct: 1268 aagcggaagcgagaatgtcggc 1289 Score = 222 bits (112), Expect = 8e-55 Identities = 125/128 (97%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 813 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 872 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 873 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 932 Query: 120 tagatatg 127 ||| |||| Sbjct: 933 taggtatg 940
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 442 bits (223), Expect = e-121 Identities = 223/223 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 820 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 879 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 880 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 939 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 940 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 999 Query: 181 tcatcgtcgagagggaaacagcccggatcaccagctaaggccc 223 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1000 tcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1042
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 420 bits (212), Expect = e-114 Identities = 290/316 (91%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||||||||||||||||||| |||| | |||||||| |||||||||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacagccaggag 1074 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || Sbjct: 1075 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctct 1134 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 395 ||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||| |||| Sbjct: 1135 tgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatc 1194 Query: 396 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 455 ||||||||||||||||||||||||| ||||| | ||| ||| || || |||||||||| Sbjct: 1195 ggtaggggagcgttccgccttagagagaagcgccagcgtgagcaggtgtggacgaagcgg 1254 Query: 456 aagcgagaatgtcggc 471 |||||||||||||||| Sbjct: 1255 aagcgagaatgtcggc 1270 Score = 202 bits (102), Expect = 7e-49 Identities = 121/126 (96%), Gaps = 1/126 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 800 gctagctggttctccccgaaatgcgttgaggcgcaacagttgactggactatctaggggt 859 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 860 aaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatac 919 Query: 120 tagata 125 | |||| Sbjct: 920 tggata 925
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 416 bits (210), Expect = e-113 Identities = 295/322 (91%), Gaps = 1/322 (0%) Strand = Plus / Minus Query: 150 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 209 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 210 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 269 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 115127 Query: 270 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 329 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 115126 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 115067 Query: 330 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 389 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 115066 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 115007 Query: 390 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 449 | ||||||||||||||||||||||||||| | ||||| | | || ||| || || |||| Sbjct: 115006 tacatcggtaggggagcgttccgccttagggagaagc-atcacgtgagcaggtgtggacg 114948 Query: 450 aagcggaagcgagaatgtcggc 471 |||||||||||||||||||||| Sbjct: 114947 aagcggaagcgagaatgtcggc 114926 Score = 416 bits (210), Expect = e-113 Identities = 295/322 (91%), Gaps = 1/322 (0%) Strand = Plus / Plus Query: 150 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 209 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 210 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 269 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 86993 Query: 270 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 329 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 86994 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 87053 Query: 330 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 389 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 87054 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 87113 Query: 390 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 449 | ||||||||||||||||||||||||||| | ||||| | | || ||| || || |||| Sbjct: 87114 tacatcggtaggggagcgttccgccttagggagaagc-atcacgtgagcaggtgtggacg 87172 Query: 450 aagcggaagcgagaatgtcggc 471 |||||||||||||||||||||| Sbjct: 87173 aagcggaagcgagaatgtcggc 87194 Score = 220 bits (111), Expect = 3e-54 Identities = 121/123 (98%), Gaps = 1/123 (0%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 115397 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 115338 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 115337 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 115278 Query: 120 tag 122 ||| Sbjct: 115277 tag 115275 Score = 220 bits (111), Expect = 3e-54 Identities = 121/123 (98%), Gaps = 1/123 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 86723 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 86782 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 86783 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 86842 Query: 120 tag 122 ||| Sbjct: 86843 tag 86845
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 412 bits (208), Expect = e-112 Identities = 289/316 (91%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 145018 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 145019 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 145078 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 395 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 145079 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 145138 Query: 396 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 455 ||||||||||||||||||| ||| ||||||| | | | ||| || || |||||||||| Sbjct: 145139 ggtaggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcgg 145198 Query: 456 aagcgagaatgtcggc 471 |||||||||||||||| Sbjct: 145199 aagcgagaatgtcggc 145214 Score = 412 bits (208), Expect = e-112 Identities = 289/316 (91%) Strand = Plus / Minus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 87833 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 87832 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 87773 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 395 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 87772 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 87713 Query: 396 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 455 ||||||||||||||||||| ||| ||||||| | | | ||| || || |||||||||| Sbjct: 87712 ggtaggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcgg 87653 Query: 456 aagcgagaatgtcggc 471 |||||||||||||||| Sbjct: 87652 aagcgagaatgtcggc 87637 Score = 200 bits (101), Expect = 3e-48 Identities = 120/125 (96%), Gaps = 1/125 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 144736 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactagaccatctaggggt 144795 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 ||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 144796 aaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 144855 Query: 120 tagat 124 ||||| Sbjct: 144856 tagat 144860 Score = 200 bits (101), Expect = 3e-48 Identities = 120/125 (96%), Gaps = 1/125 (0%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 88115 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactagaccatctaggggt 88056 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 ||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 88055 aaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 87996 Query: 120 tagat 124 ||||| Sbjct: 87995 tagat 87991
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 402 bits (203), Expect = e-109 Identities = 203/203 (100%) Strand = Plus / Minus Query: 269 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20870 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 20811 Query: 329 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20810 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 20751 Query: 389 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20750 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 20691 Query: 449 gaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||| Sbjct: 20690 gaagcggaagcgagaatgtcggc 20668
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 377 bits (190), Expect = e-101 Identities = 289/322 (89%) Strand = Plus / Minus Query: 150 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 209 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 210 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 269 ||||| |||||||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagc 5483 Query: 270 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 329 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 5482 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgag 5423 Query: 330 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 389 ||| ||||| | ||||||||||||| ||||||||||||||||||||||||||| || ||| Sbjct: 5422 cgctcttgcaccgaagatgaacgggactaagcgatctgccgaagctgtgggatatctaaa 5363 Query: 390 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 449 ||||||||||||||||||||| | |||| |||||| ||||| ||| || || |||| Sbjct: 5362 aacatcggtaggggagcgttccgtttcagagagaagcacccgcgcgagcaggtgtggacg 5303 Query: 450 aagcggaagcgagaatgtcggc 471 ||||||||| |||||||||||| Sbjct: 5302 aagcggaagtgagaatgtcggc 5281 Score = 151 bits (76), Expect = 2e-33 Identities = 116/128 (90%), Gaps = 1/128 (0%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggt 59 |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct: 5734 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaccgtctaggggt 5675 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||| ||| | | |||||||| | ||||||||||||| ||||||| Sbjct: 5674 aaagcactgtttcggtataggccgtgtaagcggtacgacatcgaggcaaactatgaatac 5615 Query: 120 tagatatg 127 |||||||| Sbjct: 5614 tagatatg 5607
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 373 bits (188), Expect = e-100 Identities = 287/319 (89%), Gaps = 2/319 (0%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 1072 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1132 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgc 392 |||||| ||||||||||||| ||||||| |||||||||||||||||||||| |||| | Sbjct: 1133 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaagac 1192 Query: 393 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 452 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 1193 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 1252 Query: 453 cggaagcgagaatgtcggc 471 |||||| |||||||||||| Sbjct: 1253 cggaagtgagaatgtcggc 1271 Score = 165 bits (83), Expect = 2e-37 Identities = 114/123 (92%), Gaps = 1/123 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggt 59 ||||||||||||||||||||||||||||||||||||| ||| | ||| | | ||||||| Sbjct: 814 gctagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgcctaggggt 873 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 874 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatac 933 Query: 120 tag 122 ||| Sbjct: 934 tag 936
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 369 bits (186), Expect = 6e-99 Identities = 370/429 (86%), Gaps = 8/429 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||| Sbjct: 792 gctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggta 850 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| | Sbjct: 851 aagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatt 910 Query: 121 agatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 178 ||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||| Sbjct: 911 agatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataag 970 Query: 179 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 238 ||||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || | Sbjct: 971 cttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaa 1030 Query: 239 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 || ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| | Sbjct: 1031 gttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccacctt 1090 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 |||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| || Sbjct: 1091 ttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaata 1150 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 ||| ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| Sbjct: 1151 agcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttat 1205 Query: 419 agggaagca 427 | ||||||| Sbjct: 1206 aaggaagca 1214
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 369 bits (186), Expect = 6e-99 Identities = 370/429 (86%), Gaps = 8/429 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||| Sbjct: 793 gctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggta 851 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| | Sbjct: 852 aagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatt 911 Query: 121 agatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 178 ||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||| Sbjct: 912 agatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataag 971 Query: 179 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 238 ||||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || | Sbjct: 972 cttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaa 1031 Query: 239 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 || ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| | Sbjct: 1032 gttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccacctt 1091 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 |||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| || Sbjct: 1092 ttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaata 1151 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 ||| ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| Sbjct: 1152 agcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttat 1206 Query: 419 agggaagca 427 | ||||||| Sbjct: 1207 aaggaagca 1215
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 369 bits (186), Expect = 6e-99 Identities = 370/429 (86%), Gaps = 8/429 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||| Sbjct: 793 gctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggta 851 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| | Sbjct: 852 aagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatt 911 Query: 121 agatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 178 ||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||| Sbjct: 912 agatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataag 971 Query: 179 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 238 ||||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || | Sbjct: 972 cttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaa 1031 Query: 239 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 || ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| | Sbjct: 1032 gttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccacctt 1091 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 |||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| || Sbjct: 1092 ttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaata 1151 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 ||| ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| Sbjct: 1152 agcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttat 1206 Query: 419 agggaagca 427 | ||||||| Sbjct: 1207 aaggaagca 1215
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 369 bits (186), Expect = 6e-99 Identities = 370/429 (86%), Gaps = 8/429 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||| Sbjct: 793 gctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggta 851 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| | Sbjct: 852 aagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatt 911 Query: 121 agatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 178 ||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||| Sbjct: 912 agatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataag 971 Query: 179 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 238 ||||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || | Sbjct: 972 cttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaa 1031 Query: 239 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 || ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| | Sbjct: 1032 gttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccacctt 1091 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 |||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| || Sbjct: 1092 ttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaata 1151 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 ||| ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| Sbjct: 1152 agcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttat 1206 Query: 419 agggaagca 427 | ||||||| Sbjct: 1207 aaggaagca 1215
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 369 bits (186), Expect = 6e-99 Identities = 370/429 (86%), Gaps = 8/429 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||| Sbjct: 793 gctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggta 851 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| | Sbjct: 852 aagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatt 911 Query: 121 agatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 178 ||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||| Sbjct: 912 agatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataag 971 Query: 179 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 238 ||||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || | Sbjct: 972 cttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaa 1031 Query: 239 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 || ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| | Sbjct: 1032 gttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccacctt 1091 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 |||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| || Sbjct: 1092 ttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaata 1151 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 ||| ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| Sbjct: 1152 agcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttat 1206 Query: 419 agggaagca 427 | ||||||| Sbjct: 1207 aaggaagca 1215
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 369 bits (186), Expect = 6e-99 Identities = 370/429 (86%), Gaps = 8/429 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||| Sbjct: 792 gctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggta 850 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| | Sbjct: 851 aagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatt 910 Query: 121 agatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 178 ||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||| Sbjct: 911 agatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataag 970 Query: 179 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 238 ||||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || | Sbjct: 971 cttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaa 1030 Query: 239 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 || ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| | Sbjct: 1031 gttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccacctt 1090 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 |||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| || Sbjct: 1091 ttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaata 1150 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 ||| ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| Sbjct: 1151 agcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttat 1205 Query: 419 agggaagca 427 | ||||||| Sbjct: 1206 aaggaagca 1214
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 369 bits (186), Expect = 6e-99 Identities = 370/429 (86%), Gaps = 8/429 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||| Sbjct: 793 gctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggta 851 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| | Sbjct: 852 aagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatt 911 Query: 121 agatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 178 ||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||| Sbjct: 912 agatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataag 971 Query: 179 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 238 ||||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || | Sbjct: 972 cttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaa 1031 Query: 239 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 || ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| | Sbjct: 1032 gttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccacctt 1091 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 |||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| || Sbjct: 1092 ttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaata 1151 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 ||| ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| Sbjct: 1152 agcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttat 1206 Query: 419 agggaagca 427 | ||||||| Sbjct: 1207 aaggaagca 1215
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 369 bits (186), Expect = 6e-99 Identities = 370/429 (86%), Gaps = 8/429 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||| Sbjct: 793 gctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggta 851 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| | Sbjct: 852 aagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatt 911 Query: 121 agatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 178 ||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||| Sbjct: 912 agatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataag 971 Query: 179 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 238 ||||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || | Sbjct: 972 cttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaa 1031 Query: 239 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 || ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| | Sbjct: 1032 gttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccacctt 1091 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 |||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| || Sbjct: 1092 ttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaata 1151 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 ||| ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| Sbjct: 1152 agcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttat 1206 Query: 419 agggaagca 427 | ||||||| Sbjct: 1207 aaggaagca 1215
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 369 bits (186), Expect = 6e-99 Identities = 370/429 (86%), Gaps = 8/429 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||| Sbjct: 793 gctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggta 851 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| | Sbjct: 852 aagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatt 911 Query: 121 agatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 178 ||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||| Sbjct: 912 agatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataag 971 Query: 179 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 238 ||||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || | Sbjct: 972 cttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaa 1031 Query: 239 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 || ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| | Sbjct: 1032 gttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccacctt 1091 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 |||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| || Sbjct: 1092 ttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaata 1151 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 ||| ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| Sbjct: 1152 agcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttat 1206 Query: 419 agggaagca 427 | ||||||| Sbjct: 1207 aaggaagca 1215
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 369 bits (186), Expect = 6e-99 Identities = 370/429 (86%), Gaps = 8/429 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||| Sbjct: 793 gctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggta 851 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| | Sbjct: 852 aagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatt 911 Query: 121 agatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 178 ||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||| Sbjct: 912 agatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataag 971 Query: 179 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 238 ||||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || | Sbjct: 972 cttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaa 1031 Query: 239 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 || ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| | Sbjct: 1032 gttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccacctt 1091 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 |||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| || Sbjct: 1092 ttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaata 1151 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 ||| ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| Sbjct: 1152 agcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttat 1206 Query: 419 agggaagca 427 | ||||||| Sbjct: 1207 aaggaagca 1215
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 369 bits (186), Expect = 6e-99 Identities = 370/429 (86%), Gaps = 8/429 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||| Sbjct: 793 gctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggta 851 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| | Sbjct: 852 aagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatt 911 Query: 121 agatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 178 ||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||| Sbjct: 912 agatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataag 971 Query: 179 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 238 ||||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || | Sbjct: 972 cttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaa 1031 Query: 239 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 || ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| | Sbjct: 1032 gttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaaggagccacctt 1091 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 |||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| || Sbjct: 1092 ttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaata 1151 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 ||| ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| Sbjct: 1152 agcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttat 1206 Query: 419 agggaagca 427 | ||||||| Sbjct: 1207 aaggaagca 1215
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 369 bits (186), Expect = 6e-99 Identities = 286/319 (89%), Gaps = 4/319 (1%) Strand = Plus / Plus Query: 157 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 216 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 217 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 276 |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagacatccaggagg 1031 Query: 277 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 336 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1032 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1091 Query: 337 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc----aaaatgc 392 |||| ||||||||| ||| ||||||| |||||||||||||||||||||| | || Sbjct: 1092 gcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtctattataagat 1151 Query: 393 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 452 ||||||||||||||||||||||||||| |||||| ||| |||| | || ||||||| Sbjct: 1152 atcggtaggggagcgttccgccttagatagaagcattagcgtaagcagatgtggacgaag 1211 Query: 453 cggaagcgagaatgtcggc 471 |||||| |||||||||||| Sbjct: 1212 cggaagtgagaatgtcggc 1230 Score = 174 bits (88), Expect = 2e-40 Identities = 119/128 (92%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatct-aggggt 59 ||||||||||||||||||||||||||||||||||||| |||| ||||| || |||||| Sbjct: 769 gctagctggttctccccgaaatgcgttgaggcgcagcgattgattggactacttaggggt 828 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 829 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatac 888 Query: 120 tagatatg 127 ||| |||| Sbjct: 889 taggtatg 896
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 367 bits (185), Expect = 2e-98 Identities = 290/324 (89%), Gaps = 2/324 (0%) Strand = Plus / Plus Query: 150 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 209 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 210 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 269 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1065 Query: 270 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 329 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1066 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1125 Query: 330 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 387 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1126 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1185 Query: 388 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 447 | ||||||||||||||||||||||| || | |||||| | | | || | || || || Sbjct: 1186 agggcatcggtaggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtgga 1245 Query: 448 cgaagcggaagcgagaatgtcggc 471 ||||||||||| |||||||||||| Sbjct: 1246 cgaagcggaagtgagaatgtcggc 1269 Score = 188 bits (95), Expect = 1e-44 Identities = 117/123 (95%), Gaps = 1/123 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggt 59 ||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||| Sbjct: 813 gctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggggt 872 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 873 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatac 932 Query: 120 tag 122 ||| Sbjct: 933 tag 935
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 367 bits (185), Expect = 2e-98 Identities = 290/324 (89%), Gaps = 2/324 (0%) Strand = Plus / Plus Query: 150 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 209 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 210 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 269 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1078 Query: 270 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 329 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1079 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1138 Query: 330 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 387 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1139 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1198 Query: 388 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 447 | ||||||||||||||||||||||| || | |||||| | | | || | || || || Sbjct: 1199 agggcatcggtaggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtgga 1258 Query: 448 cgaagcggaagcgagaatgtcggc 471 ||||||||||| |||||||||||| Sbjct: 1259 cgaagcggaagtgagaatgtcggc 1282 Score = 188 bits (95), Expect = 1e-44 Identities = 117/123 (95%), Gaps = 1/123 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggt 59 ||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||| Sbjct: 826 gctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggggt 885 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 886 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatac 945 Query: 120 tag 122 ||| Sbjct: 946 tag 948
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 363 bits (183), Expect = 3e-97 Identities = 246/266 (92%), Gaps = 2/266 (0%) Strand = Plus / Plus Query: 150 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 209 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 210 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 269 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1182 Query: 270 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 329 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1183 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1242 Query: 330 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa-- 387 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| | Sbjct: 1243 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccatt 1302 Query: 388 aatgcatcggtaggggagcgttccgc 413 | ||||||||||||||||||||||| Sbjct: 1303 agggcatcggtaggggagcgttccgc 1328 Score = 188 bits (95), Expect = 1e-44 Identities = 117/123 (95%), Gaps = 1/123 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggt 59 ||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||| Sbjct: 930 gctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggggt 989 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 990 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatac 1049 Query: 120 tag 122 ||| Sbjct: 1050 tag 1052
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 363 bits (183), Expect = 3e-97 Identities = 224/235 (95%), Gaps = 2/235 (0%) Strand = Plus / Plus Query: 237 cagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacc 296 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1 cagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacc 60 Query: 297 ctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggc 356 ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 61 cttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc-gaagatgaacggggc 119 Query: 357 taagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcctt 416 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 120 taagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccg-ctt 178 Query: 417 agagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||| ||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 179 agagggaagcacccgcgcgagcgggggtggacgaagcggaagcgagaatgtcggc 233
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 361 bits (182), Expect = 1e-96 Identities = 369/429 (86%), Gaps = 8/429 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||| Sbjct: 793 gctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggta 851 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| | Sbjct: 852 aagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatt 911 Query: 121 agatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 178 ||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||| Sbjct: 912 agatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataag 971 Query: 179 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 238 ||||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || | Sbjct: 972 cttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaa 1031 Query: 239 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 || ||||||||||| |||||||| | ||| |||||| ||||||||||||| |||||| | Sbjct: 1032 gttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaggccacctt 1091 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 |||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| || Sbjct: 1092 ttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaata 1151 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 ||| ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| Sbjct: 1152 agcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttat 1206 Query: 419 agggaagca 427 | ||||||| Sbjct: 1207 aaggaagca 1215
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 361 bits (182), Expect = 1e-96 Identities = 369/429 (86%), Gaps = 8/429 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||| Sbjct: 793 gctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggta 851 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| | Sbjct: 852 aagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatt 911 Query: 121 agatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 178 ||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||| Sbjct: 912 agatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataag 971 Query: 179 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 238 ||||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || | Sbjct: 972 cttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaa 1031 Query: 239 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 || ||||||||||| |||||||| | ||| |||||| | ||||||||||| ||||||| | Sbjct: 1032 gttataaaggaggtaggggtgcataaacaaccaggaagcttgcctagaagaagccacctt 1091 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 |||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| || Sbjct: 1092 ttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaata 1151 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 ||| ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| Sbjct: 1152 agcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttat 1206 Query: 419 agggaagca 427 | ||||||| Sbjct: 1207 aaggaagca 1215
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 361 bits (182), Expect = 1e-96 Identities = 370/429 (86%), Gaps = 9/429 (2%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||| ||||| ||| ||| || ||| |||||||||| Sbjct: 793 gctagctggttctccccgaaatgcgtttaggcggagc-gtt-accagacctctaggggta 850 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| | Sbjct: 851 aagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatt 910 Query: 121 agatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 178 ||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||| Sbjct: 911 agatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataag 970 Query: 179 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 238 ||||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || | Sbjct: 971 cttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaa 1030 Query: 239 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 || ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| | Sbjct: 1031 gttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccacctt 1090 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 |||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| || Sbjct: 1091 ttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaata 1150 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 ||| ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| Sbjct: 1151 agcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttat 1205 Query: 419 agggaagca 427 | ||||||| Sbjct: 1206 aaggaagca 1214
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 361 bits (182), Expect = 1e-96 Identities = 369/429 (86%), Gaps = 8/429 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||| ||||| || ||| || ||| |||||||||| Sbjct: 793 gctagctggttctccccgaaatgcgtttaggcggagtcgtt-accagacctctaggggta 851 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| | Sbjct: 852 aagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatt 911 Query: 121 agatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 178 ||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||| Sbjct: 912 agatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataag 971 Query: 179 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 238 ||||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || | Sbjct: 972 cttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaa 1031 Query: 239 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 || ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| | Sbjct: 1032 gttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccacctt 1091 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 |||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| || Sbjct: 1092 ttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaata 1151 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 ||| ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| Sbjct: 1152 agcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttat 1206 Query: 419 agggaagca 427 | ||||||| Sbjct: 1207 aaggaagca 1215
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 359 bits (181), Expect = 5e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 120 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 179 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 180 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 239 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 240 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 299 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152950 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 19153009 Query: 300 taaagagtgcgtaatagctca 320 |||||||||||| ||| |||| Sbjct: 19153010 taaagagtgcgttatatctca 19153030
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 359 bits (181), Expect = 5e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 120 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 179 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 180 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 239 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 240 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 299 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76345 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 76404 Query: 300 taaagagtgcgtaatagctca 320 |||||||||||| ||| |||| Sbjct: 76405 taaagagtgcgttatatctca 76425
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 357 bits (180), Expect = 2e-95 Identities = 285/319 (89%), Gaps = 2/319 (0%) Strand = Plus / Minus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 124193 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 124192 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 124133 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gc 392 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| | | Sbjct: 124132 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgac 124073 Query: 393 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 452 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 124072 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 124013 Query: 453 cggaagcgagaatgtcggc 471 |||||| |||||||||||| Sbjct: 124012 cggaagtgagaatgtcggc 123994 Score = 357 bits (180), Expect = 2e-95 Identities = 285/319 (89%), Gaps = 2/319 (0%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 95673 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 95674 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 95733 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gc 392 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| | | Sbjct: 95734 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgac 95793 Query: 393 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 452 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 95794 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 95853 Query: 453 cggaagcgagaatgtcggc 471 |||||| |||||||||||| Sbjct: 95854 cggaagtgagaatgtcggc 95872 Score = 157 bits (79), Expect = 4e-35 Identities = 113/123 (91%), Gaps = 1/123 (0%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggt 59 ||||||||||||||||||||||||||||||||||||| ||| | ||| | | ||||||| Sbjct: 124451 gctagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgcctaggggt 124392 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 124391 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagtcaaactctgaatac 124332 Query: 120 tag 122 ||| Sbjct: 124331 tag 124329 Score = 157 bits (79), Expect = 4e-35 Identities = 113/123 (91%), Gaps = 1/123 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggt 59 ||||||||||||||||||||||||||||||||||||| ||| | ||| | | ||||||| Sbjct: 95415 gctagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgcctaggggt 95474 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 95475 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagtcaaactctgaatac 95534 Query: 120 tag 122 ||| Sbjct: 95535 tag 95537
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 355 bits (179), Expect = 8e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 176 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 235 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 167952 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 168011 Query: 236 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 295 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 168012 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 168066 Query: 296 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168067 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 168126 Query: 356 ctaagcgatctgccgaagctgtgggatgtcaaaat 390 |||||||||||||| |||||||||||||||||||| Sbjct: 168127 ctaagcgatctgccaaagctgtgggatgtcaaaat 168161
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 355 bits (179), Expect = 8e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 176 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 235 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2356 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 2415 Query: 236 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 295 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 2416 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 2470 Query: 296 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2471 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 2530 Query: 356 ctaagcgatctgccgaagctgtgggatgtcaaaat 390 |||||||||||||| |||||||||||||||||||| Sbjct: 2531 ctaagcgatctgccaaagctgtgggatgtcaaaat 2565
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 353 bits (178), Expect = 3e-94 Identities = 283/318 (88%), Gaps = 5/318 (1%) Strand = Plus / Plus Query: 154 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 213 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 214 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 273 ||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagccagg 1119 Query: 274 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 333 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1120 aggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgct 1179 Query: 334 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 393 ||||||| ||| ||||||||| ||||||||| |||||||||||||||||| | || Sbjct: 1180 cttgcgccgaatatgaacgggaataagcgatccgccgaagctgtgggatgtaa-----ca 1234 Query: 394 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 453 ||||||||||||||||| |||||| ||||||||| | || ||| | ||| || ||||| Sbjct: 1235 tcggtaggggagcgttctgccttatagggaagcacctgcacgagcagtggtggatgaagc 1294 Query: 454 ggaagcgagaatgtcggc 471 |||| |||||||||||| Sbjct: 1295 agaagtgagaatgtcggc 1312 Score = 168 bits (85), Expect = 1e-38 Identities = 119/129 (92%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||| ||| ||||||||| || ||||||||||||||| Sbjct: 830 gctagctggttctccccgaaatgcgtttaggggcagcagtt-accggacatctaggggta 888 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||| || |||||||||||||| |||||||||| |||||||| Sbjct: 889 aagcactgtttcggtgcgggtctcgagagcggtaccaaattgaggcaaactatgaatact 948 Query: 121 agatatgac 129 ||||||||| Sbjct: 949 agatatgac 957
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 345 bits (174), Expect = 8e-92 Identities = 367/429 (85%), Gaps = 8/429 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||| ||||| ||| || | | || |||||||||| Sbjct: 793 gctagctggttctccccgaaatgcgtttaggcggagccgtatccag-acctctaggggta 851 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| | Sbjct: 852 aagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatt 911 Query: 121 agatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 178 ||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||||||||| Sbjct: 912 agatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataag 971 Query: 179 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 238 ||||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || | Sbjct: 972 cttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaa 1031 Query: 239 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 298 || ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| | Sbjct: 1032 gttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccacctt 1091 Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 |||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| || Sbjct: 1092 ttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaata 1151 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 || ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| Sbjct: 1152 ggcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttat 1206 Query: 419 agggaagca 427 | ||||||| Sbjct: 1207 aaggaagca 1215
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 345 bits (174), Expect = 8e-92 Identities = 189/194 (97%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364995 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 365054 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 365055 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 365114 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 365115 agatatgacctcaaaataacaggggtcaaggtcggccagtgagacggtgggggataagct 365174 Query: 181 tcatcgtcgagagg 194 |||||||||||||| Sbjct: 365175 tcatcgtcgagagg 365188 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 189 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 248 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 249 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 307 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129287 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 129228 Query: 308 gcgtaatagctcactg 323 |||||||||||||||| Sbjct: 129227 gcgtaatagctcactg 129212 Score = 48.1 bits (24), Expect = 0.026 Identities = 51/60 (85%) Strand = Plus / Minus Query: 264 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 323 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 10906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 10847 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 186 gtcgagagggaaacagcccggatc 209 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 343 bits (173), Expect = 3e-91 Identities = 173/173 (100%) Strand = Plus / Plus Query: 299 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 60 Query: 359 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 120 Query: 419 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 173
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 337 bits (170), Expect = 2e-89 Identities = 283/320 (88%), Gaps = 3/320 (0%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 ||||||||||||||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagccagga 1034 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | Sbjct: 1035 ggtttgcctagaagcagctacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1094 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat---g 391 |||||| ||||||||| ||| ||||||| ||||||||||||||| ||||| |||| Sbjct: 1095 ttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgagatgtttaaatataa 1154 Query: 392 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 451 |||||||||||||||||||||| |||| |||||| ||| ||||| || ||| || Sbjct: 1155 catcggtaggggagcgttccgcattaggttgaagcactagcgtaagcgaatgtggacaaa 1214 Query: 452 gcggaagcgagaatgtcggc 471 ||||||| |||||||||||| Sbjct: 1215 gcggaagtgagaatgtcggc 1234 Score = 161 bits (81), Expect = 3e-36 Identities = 118/129 (91%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||||||| Sbjct: 776 gctagctggttctccccgaaatgcgttgaggcgcagcggttgactagactatttaggggt 835 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||| | | ||||||||||| || ||||||||||||||| Sbjct: 836 aaagcactgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactctgaatac 895 Query: 120 tagatatga 128 || |||||| Sbjct: 896 taaatatga 904
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 337 bits (170), Expect = 2e-89 Identities = 278/314 (88%) Strand = Plus / Plus Query: 158 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 217 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 218 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 277 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 5124 Query: 278 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 337 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 5125 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 5184 Query: 338 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 397 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 5185 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 5244 Query: 398 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 457 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 5245 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 5304 Query: 458 gcgagaatgtcggc 471 |||||||||||||| Sbjct: 5305 gcgagaatgtcggc 5318 Score = 161 bits (81), Expect = 3e-36 Identities = 112/121 (92%), Gaps = 1/121 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 |||||||||||||||||||||||||||||||||||||| || |||| || ||| |||||| Sbjct: 4863 gctagctggttctccccgaaatgcgttgaggcgcagcaattaactgcactatccaggggt 4922 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 ||||||||||||||||||||||| || || ||||||||||||||||||||||||||||| Sbjct: 4923 aaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactctgaatac 4982 Query: 120 t 120 | Sbjct: 4983 t 4983
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 337 bits (170), Expect = 2e-89 Identities = 278/314 (88%) Strand = Plus / Plus Query: 158 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 217 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 218 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 277 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 1091 Query: 278 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 337 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 338 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 397 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 398 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 457 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 1212 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 1271 Query: 458 gcgagaatgtcggc 471 |||||||||||||| Sbjct: 1272 gcgagaatgtcggc 1285 Score = 161 bits (81), Expect = 3e-36 Identities = 112/121 (92%), Gaps = 1/121 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 |||||||||||||||||||||||||||||||||||||| || |||| || ||| |||||| Sbjct: 830 gctagctggttctccccgaaatgcgttgaggcgcagcaattaactgcactatccaggggt 889 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 ||||||||||||||||||||||| || || ||||||||||||||||||||||||||||| Sbjct: 890 aaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactctgaatac 949 Query: 120 t 120 | Sbjct: 950 t 950
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 333 bits (168), Expect = 3e-88 Identities = 192/200 (96%) Strand = Plus / Minus Query: 183 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 242 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 115474 atcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtga 115415 Query: 243 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 302 |||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 115414 taaaggaggtaggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 115355 Query: 303 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 362 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 115354 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 115295 Query: 363 atctgccgaagctgtgggat 382 |||||||||||||||||||| Sbjct: 115294 atctgccgaagctgtgggat 115275
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 329 bits (166), Expect = 5e-87 Identities = 277/314 (88%) Strand = Plus / Plus Query: 158 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 217 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 218 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 277 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| |||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcaggaggt 1086 Query: 278 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 337 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || | Sbjct: 1087 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctctcg 1146 Query: 338 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 397 ||| ||||||||| ||| ||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 1147 cgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgctaaaatacatcgg 1206 Query: 398 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 457 |||||||||||||||| ||| | |||||| | | | || | | || |||||||||||| Sbjct: 1207 taggggagcgttccgctctagggagaagcatcagtgtaaacagatgtggacgaagcggaa 1266 Query: 458 gcgagaatgtcggc 471 |||||||||||||| Sbjct: 1267 gcgagaatgtcggc 1280 Score = 178 bits (90), Expect = 1e-41 Identities = 118/126 (93%), Gaps = 1/126 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 |||||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||| Sbjct: 825 gctagctggttctccccgaaatgcgttgaggcgcagcaattaactggactatccaggggt 884 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 885 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagacaaactctgaatac 944 Query: 120 tagata 125 | |||| Sbjct: 945 tggata 950
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 329 bits (166), Expect = 5e-87 Identities = 277/314 (88%) Strand = Plus / Plus Query: 158 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 217 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 218 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 277 ||||||||||||| ||||| |||| ||||| ||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagacaatcagtaggt 1091 Query: 278 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 337 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 338 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 397 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 398 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 457 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 1212 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 1271 Query: 458 gcgagaatgtcggc 471 |||||||||||||| Sbjct: 1272 gcgagaatgtcggc 1285 Score = 161 bits (81), Expect = 3e-36 Identities = 112/121 (92%), Gaps = 1/121 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 |||||||||||||||||||||||||||||||||||||| || |||| || ||| |||||| Sbjct: 830 gctagctggttctccccgaaatgcgttgaggcgcagcaattaactgcactatccaggggt 889 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 ||||||||||||||||||||||| || || ||||||||||||||||||||||||||||| Sbjct: 890 aaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactctgaatac 949 Query: 120 t 120 | Sbjct: 950 t 950
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 325 bits (164), Expect = 7e-86 Identities = 164/164 (100%) Strand = Plus / Plus Query: 308 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 60 Query: 368 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 120 Query: 428 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 164
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 319 bits (161), Expect = 5e-84 Identities = 161/161 (100%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 161 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 102 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 42 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtg 161 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 41 agatatgacccaaaaataacaggggtcaaggtcggccagtg 1
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 319 bits (161), Expect = 5e-84 Identities = 176/181 (97%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47069 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 47128 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 47129 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 47188 Query: 121 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47189 agatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 47248 Query: 181 t 181 | Sbjct: 47249 t 47249
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 313 bits (158), Expect = 3e-82 Identities = 206/222 (92%) Strand = Plus / Plus Query: 157 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 216 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 217 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 276 ||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggagg 1477 Query: 277 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 336 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1478 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1537 Query: 337 gcgctgaagatgaacggggctaagcgatctgccgaagctgtg 378 |||| ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1538 gcgccgaaaatgaacgggactaagcggtctgccgaagctgtg 1579 Score = 168 bits (85), Expect = 1e-38 Identities = 119/129 (92%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaca-tctaggggt 59 ||||||||||||||||||||||||||||||||||||| |||||| || | ||||||| Sbjct: 1217 gctagctggttctccccgaaatgcgttgaggcgcagcgattgactaaactgtttaggggt 1276 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1277 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatac 1336 Query: 120 tagatatga 128 |||| |||| Sbjct: 1337 tagacatga 1345 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 393 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 452 ||||||||||||||||||||| ||||| |||||| ||| |||| || || ||||| | Sbjct: 1601 atcggtaggggagcgttccgcgttagatcgaagcattagcgtaagcaggtgtggacgagg 1660 Query: 453 cggaagcgagaatgtcggc 471 |||||| |||||||||||| Sbjct: 1661 cggaagtgagaatgtcggc 1679
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 291 bits (147), Expect = 1e-75 Identities = 207/227 (91%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||||||||||||||||||| |||| ||||||||||| | ||| | ||| ||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggtgagaatgctgaaacaaccaggag 1085 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1086 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1145 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 382 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1146 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1192 Score = 135 bits (68), Expect = 1e-28 Identities = 112/126 (88%), Gaps = 3/126 (2%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatctaggg 57 ||||||||||||||||||||||||||||||||||||| ||| || || ||||||| Sbjct: 825 gctagctggttctccccgaaatgcgttgaggcgcagcggttaatgatgggcggtctaggg 884 Query: 58 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 117 |||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||| Sbjct: 885 gtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaat 944 Query: 118 actaga 123 |||||| Sbjct: 945 actaga 950 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 atcggtaggggagcgttccgc 413 ||||||||||||||||||||| Sbjct: 1242 atcggtaggggagcgttccgc 1262
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 283 bits (143), Expect = 3e-73 Identities = 276/320 (86%), Gaps = 4/320 (1%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 1012 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 1071 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1072 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 1131 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 391 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 1132 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 1191 Query: 392 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 451 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 1192 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 1251 Query: 452 gcggaagcgagaatgtcggc 471 ||||||| |||||||||||| Sbjct: 1252 gcggaagtgagaatgtcggc 1271 Score = 163 bits (82), Expect = 6e-37 Identities = 115/125 (92%), Gaps = 2/125 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgact--ggacatctagggg 58 ||||||||||||||||||||||||||||||||||||| |||| | || |||||||| Sbjct: 812 gctagctggttctccccgaaatgcgttgaggcgcagcggttggatagggctttctagggg 871 Query: 59 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 118 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 872 taaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctgaata 931 Query: 119 ctaga 123 ||||| Sbjct: 932 ctaga 936
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 283 bits (143), Expect = 3e-73 Identities = 276/320 (86%), Gaps = 4/320 (1%) Strand = Plus / Minus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 114650 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 114591 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 114590 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 114531 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 391 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 114530 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 114471 Query: 392 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 451 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 114470 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 114411 Query: 452 gcggaagcgagaatgtcggc 471 ||||||| |||||||||||| Sbjct: 114410 gcggaagtgagaatgtcggc 114391 Score = 283 bits (143), Expect = 3e-73 Identities = 276/320 (86%), Gaps = 4/320 (1%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 87338 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 87397 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 87398 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 87457 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 391 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 87458 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 87517 Query: 392 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 451 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 87518 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 87577 Query: 452 gcggaagcgagaatgtcggc 471 ||||||| |||||||||||| Sbjct: 87578 gcggaagtgagaatgtcggc 87597 Score = 163 bits (82), Expect = 6e-37 Identities = 115/125 (92%), Gaps = 2/125 (1%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgact--ggacatctagggg 58 ||||||||||||||||||||||||||||||||||||| |||| | || |||||||| Sbjct: 114850 gctagctggttctccccgaaatgcgttgaggcgcagcggttggatagggctttctagggg 114791 Query: 59 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 118 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 114790 taaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctgaata 114731 Query: 119 ctaga 123 ||||| Sbjct: 114730 ctaga 114726 Score = 163 bits (82), Expect = 6e-37 Identities = 115/125 (92%), Gaps = 2/125 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgact--ggacatctagggg 58 ||||||||||||||||||||||||||||||||||||| |||| | || |||||||| Sbjct: 87138 gctagctggttctccccgaaatgcgttgaggcgcagcggttggatagggctttctagggg 87197 Query: 59 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 118 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 87198 taaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctgaata 87257 Query: 119 ctaga 123 ||||| Sbjct: 87258 ctaga 87262
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 280 bits (141), Expect = 4e-72 Identities = 273/317 (86%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 4104 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 4105 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 4164 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 394 |||||| ||||||||||||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 4165 ttgcgccgaagatgaacgggactaagcgatttgccgaaactgtgggatgtttaagtacat 4224 Query: 395 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 454 |||||||||||||||| || ||||| |||||| | | |||| | | || |||||||| Sbjct: 4225 cggtaggggagcgttctgctatagagtgaagcatcagtgaaaacagatgtggacgaagca 4284 Query: 455 gaagcgagaatgtcggc 471 |||| |||||||||||| Sbjct: 4285 gaagtgagaatgtcggc 4301 Score = 167 bits (84), Expect = 4e-38 Identities = 118/128 (92%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||||| ||| | ||| | || ||||||| Sbjct: 3848 gctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgggctatttaggggt 3907 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 3908 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaatac 3967 Query: 120 tagatatg 127 || ||||| Sbjct: 3968 taaatatg 3975
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 276 bits (139), Expect = 6e-71 Identities = 232/262 (88%), Gaps = 2/262 (0%) Strand = Plus / Plus Query: 152 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 211 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 212 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 271 ||||||||||||| |||| |||||||||||||||||| ||| | |||| ||||| ||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaaggatgtgagagtgcccagacaacca 1067 Query: 272 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 331 |||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 1068 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcg 1127 Query: 332 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 391 | ||||||| ||| ||||||||| ||||||| |||||||||||||| |||| || Sbjct: 1128 ctcttgcgccgaaaatgaacgggactaagcggcctgccgaagctgtgagatggtgaa--t 1185 Query: 392 catcggtaggggagcgttccgc 413 |||||||||||||||||||||| Sbjct: 1186 catcggtaggggagcgttccgc 1207 Score = 123 bits (62), Expect = 5e-25 Identities = 111/126 (88%), Gaps = 6/126 (4%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgact-----ggaca-tcta 54 ||||||||||||||||||||||||||||||||||||| || || | || || |||| Sbjct: 808 gctagctggttctccccgaaatgcgttgaggcgcagcggtcgattaagatgggcagtcta 867 Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| | Sbjct: 868 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaag 927 Query: 115 aatact 120 |||||| Sbjct: 928 aatact 933
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 272 bits (137), Expect = 1e-69 Identities = 203/225 (90%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagacaaccagga 688 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 |||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 689 ggtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctc 748 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 379 ||||| ||| |||||||||||||||||| ||||||||||||||| Sbjct: 749 ctgcgccgaaaatgaacggggctaagcgacctgccgaagctgtgg 793 Score = 97.6 bits (49), Expect = 3e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 115 aatac 119 ||||| Sbjct: 550 aatac 554 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttg 42 ||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 435 gctagctggttctccccgaaatgtgttgaggcgcagcggttg 476
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 268 bits (135), Expect = 2e-68 Identities = 204/227 (89%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 |||||||||| |||| ||||| |||| ||||||||||| | |||| | ||| ||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtgagaatgcagaaacaaccaggag 1222 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 |||||| |||||||||| |||||||||||||||||||||||||||||| | ||||| || Sbjct: 1223 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtggagcgttct 1282 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 382 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1283 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1329 Score = 147 bits (74), Expect = 4e-32 Identities = 115/126 (91%), Gaps = 2/126 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgac-tggaca-tctagggg 58 ||||||||||||||||||||||||||||||||||||| ||| || ||| | |||||||| Sbjct: 963 gctagctggttctccccgaaatgcgttgaggcgcagcggttaacgtgggcggtctagggg 1022 Query: 59 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 118 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||| Sbjct: 1023 taaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaata 1082 Query: 119 ctagat 124 |||||| Sbjct: 1083 ctagat 1088 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 393 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 452 ||||||||||||||||||||| ||| | |||||| | |||||| || || ||||||| Sbjct: 1410 atcggtaggggagcgttccgctctagggtgaagcatcaacgaaagtaggtgtggacgaag 1469 Query: 453 cggaagcgagaatgtcggc 471 |||||| |||||||||||| Sbjct: 1470 cggaagtgagaatgtcggc 1488
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 268 bits (135), Expect = 2e-68 Identities = 201/223 (90%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||||||||||||| ||||| |||||||||||||||| | ||| | ||| ||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggtgagaatgctgaaacaaccaggag 1079 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 |||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| || Sbjct: 1080 gtttgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtggagcgttct 1139 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 378 ||||| ||| ||||||||| ||||||| |||||||||||||| Sbjct: 1140 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtg 1182 Score = 151 bits (76), Expect = 2e-33 Identities = 115/126 (91%), Gaps = 4/126 (3%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgac---tggac-atctagg 56 ||||||||||||||||||||||||||||||||||||| |||||| ||| | ||||||| Sbjct: 817 gctagctggttctccccgaaatgcgttgaggcgcagcggttgacgaatgggctatctagg 876 Query: 57 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 116 ||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| Sbjct: 877 ggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaa 936 Query: 117 tactag 122 |||||| Sbjct: 937 tactag 942 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 446 gacgaagcggaagcgagaatgtcggc 471 ||||||||||||| |||||||||||| Sbjct: 1268 gacgaagcggaagtgagaatgtcggc 1293 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 atcggtaggggagcgttccgc 413 ||||||||||||||||||||| Sbjct: 1215 atcggtaggggagcgttccgc 1235
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 268 bits (135), Expect = 2e-68 Identities = 156/163 (95%) Strand = Plus / Plus Query: 309 cgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgc 368 |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 755 cgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgc 814 Query: 369 cgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaa 428 |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 cgaagctgcgggatgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcac 874 Query: 429 ccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 471 |||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 875 ccgcgagagcgggggtggacgaagcggaagcgagaatgtcggc 917
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 264 bits (133), Expect = 2e-67 Identities = 271/317 (85%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 394 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgtttaagtacat 1190 Query: 395 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 454 |||||||||||||||| || |||| |||||| | | |||| | | || |||||||| Sbjct: 1191 cggtaggggagcgttctgctatagattgaagcatcagtgaaaacagatgtggacgaagca 1250 Query: 455 gaagcgagaatgtcggc 471 |||| |||||||||||| Sbjct: 1251 gaagtgagaatgtcggc 1267 Score = 167 bits (84), Expect = 4e-38 Identities = 118/128 (92%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||||| ||| | ||| | || ||||||| Sbjct: 814 gctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgggctatttaggggt 873 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 874 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaatac 933 Query: 120 tagatatg 127 || ||||| Sbjct: 934 taaatatg 941
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 264 bits (133), Expect = 2e-67 Identities = 272/317 (85%), Gaps = 1/317 (0%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 394 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| ||| ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgt-ttaatacat 1189 Query: 395 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 454 |||||||||||||||| || ||||| |||||| | | |||| | | || |||||||| Sbjct: 1190 cggtaggggagcgttctgctatagagtgaagcaccagtgaaaacagatgtggacgaagca 1249 Query: 455 gaagcgagaatgtcggc 471 |||| |||||||||||| Sbjct: 1250 gaagtgagaatgtcggc 1266 Score = 167 bits (84), Expect = 4e-38 Identities = 118/128 (92%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 59 ||||||||||||||||||||||||||||||||||||| ||| | ||| | || ||||||| Sbjct: 814 gctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgggctatttaggggt 873 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 874 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaatac 933 Query: 120 tagatatg 127 || ||||| Sbjct: 934 taaatatg 941
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 262 bits (132), Expect = 9e-67 Identities = 201/224 (89%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||||||| ||||||||||| |||| ||||||||| | ||||||||||| |||||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagacaaccagga 1063 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1064 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctc 1123 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 378 | |||| ||| | ||||||| ||||||| |||||||||| |||| Sbjct: 1124 tcgcgccgaaaacgaacgggactaagcggtctgccgaagttgtg 1167 Score = 103 bits (52), Expect = 5e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 50 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 109 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 110 ctctgaatactagata 125 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 395 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 454 ||||||||||||||||||| ||| | |||||| | |||||||| || || ||||||||| Sbjct: 1192 cggtaggggagcgttccgctctagggtgaagcatcagcgaaagcaggtgtggacgaagcg 1251 Query: 455 gaagcgagaatgtcggc 471 |||| |||||||||||| Sbjct: 1252 gaagtgagaatgtcggc 1268 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||||||||||||||||| Sbjct: 806 gctagctggttctccccgaaatgcgttgaggcgcagc 842
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 262 bits (132), Expect = 9e-67 Identities = 270/316 (85%), Gaps = 5/316 (1%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 |||||||||||||| | ||| |||||||||||||||||| |||| ||||| ||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggtgggaatgcatagacaaccaggag 2624 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 2625 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 2684 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 395 ||||| ||| ||||||||| |||||| || ||||||||||||||||| ||| ||| Sbjct: 2685 tgcgccgaaaatgaacgggactaagcaatttgccgaagctgtgggat-----aatttatc 2739 Query: 396 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 455 ||||||||||||||| || ||||| |||||| ||| ||||||| || |||||||| | Sbjct: 2740 ggtaggggagcgttctgcattagattgaagcattagcgtaagcgggtgtggacgaagcag 2799 Query: 456 aagcgagaatgtcggc 471 ||| |||||||||||| Sbjct: 2800 aagtgagaatgtcggc 2815 Score = 135 bits (68), Expect = 1e-28 Identities = 107/120 (89%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 ||||||||||||||||||||||||||||||||||||| ||| | | | | |||||| Sbjct: 2371 gctagctggttctccccgaaatgcgttgaggcgcagcggttaaatttaagcttgggggta 2430 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 2431 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaatact 2490
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 252 bits (127), Expect = 9e-64 Identities = 227/259 (87%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 ||||||||||| ||||||||||||| ||| ||||||||||||||||||| || || | | Sbjct: 954 gccagtgagactgtgggggataagctccattgtcgagagggaaacagcccagaccatcgg 1013 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 ||||||||||||||||| || |||||||||||||||| | |||| ||||| |||||| Sbjct: 1014 ctaaggcccctaaatgattactaagtgataaaggaggtgagagtgcccagacaaccagga 1073 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1074 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 1133 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg-ca 393 |||||| ||| ||||||||| ||||| |||||||||||||||||||| ||| || | Sbjct: 1134 ttgcgccgaaaatgaacgggactaagtaatctgccgaagctgtgggataacaatttgtta 1193 Query: 394 tcggtaggggagcgttccg 412 ||||||||||||||||||| Sbjct: 1194 tcggtaggggagcgttccg 1212 Score = 121 bits (61), Expect = 2e-24 Identities = 112/127 (88%), Gaps = 4/127 (3%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggaca-tctagg 56 ||||||||||||||||||||||||||||||||||||| ||| || | | | |||||| Sbjct: 815 gctagctggttctccccgaaatgcgttgaggcgcagcggttgatgattaggctgtctagg 874 Query: 57 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 116 |||| |||||||| ||||||||||||||| |||||||||||||||| |||||||| ||| Sbjct: 875 ggtagagcactgtctcggtgcgggctgcgagagcggtaccaaatcgtagcaaactccgaa 934 Query: 117 tactaga 123 ||||||| Sbjct: 935 tactaga 941
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Minus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 170531 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 170472 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 170471 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 170412 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 170411 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 170352 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 377 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 170351 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 170310 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 122395 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 122454 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 122455 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 122514 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 122515 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 122574 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 377 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 122575 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 122616 Score = 93.7 bits (47), Expect = 5e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 54 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 113 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 170617 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 170558 Query: 114 gaatact 120 ||||||| Sbjct: 170557 gaatact 170551 Score = 93.7 bits (47), Expect = 5e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 54 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 113 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 122309 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 122368 Query: 114 gaatact 120 ||||||| Sbjct: 122369 gaatact 122375 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||| ||||||||||||||||||||||||||| Sbjct: 170691 gctagctggatctccccgaaatgcgttgaggcgcagc 170655 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||| ||||||||||||||||||||||||||| Sbjct: 122235 gctagctggatctccccgaaatgcgttgaggcgcagc 122271 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 ggtaggggagcgttccgcct 415 |||||||||||||||||||| Sbjct: 170294 ggtaggggagcgttccgcct 170275 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 ggtaggggagcgttccgcct 415 |||||||||||||||||||| Sbjct: 122632 ggtaggggagcgttccgcct 122651
>gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3434 Score = 250 bits (126), Expect = 4e-63 Identities = 225/258 (87%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 2649 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 2708 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| ||| |||| | | || |||||||||||||||||| ||||| ||||| | |||| Sbjct: 2709 ctaaggtccccaaatcatcactaagtgataaaggaggtgggagtgcacagacaactagga 2768 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 2769 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 2828 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 394 ||||| ||| ||||||||||||||| ||| | ||||||||||||||| |||| || Sbjct: 2829 ctgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggattaagaaattaat 2888 Query: 395 cggtaggggagcgttccg 412 |||||||||||||||||| Sbjct: 2889 cggtaggggagcgttccg 2906 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2570 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2629 Query: 115 aatac 119 ||||| Sbjct: 2630 aatac 2634 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||| ||||||||||||| Sbjct: 2515 gctagctggttctccccgaaatgtgttgaggcgcagc 2551
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 986 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 1045 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 1046 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 1105 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 1106 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctct 1165 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 377 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 1166 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 1207 Score = 93.7 bits (47), Expect = 5e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 54 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 113 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 900 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 959 Query: 114 gaatact 120 ||||||| Sbjct: 960 gaatact 966 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||| ||||||||||||||||||||||||||| Sbjct: 826 gctagctggatctccccgaaatgcgttgaggcgcagc 862 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 ggtaggggagcgttccgcct 415 |||||||||||||||||||| Sbjct: 1223 ggtaggggagcgttccgcct 1242
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 248 bits (125), Expect = 1e-62 Identities = 201/225 (89%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| ||| ||||||| ||| |||||||||||||||| | ||||| |||| |||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggtgagagtgcactgacaaccagga 686 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 687 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 746 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 379 || ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 747 tt-cgccgaaaatgaacggggctaagcagtctaccgaagctgtgg 790 Score = 113 bits (57), Expect = 5e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 115 aatac 119 ||||| Sbjct: 548 aatac 552 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||| |||||||| |||| Sbjct: 433 gctagctggttctccccgaaatgtgttgaggcacagc 469
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 248 bits (125), Expect = 1e-62 Identities = 200/225 (88%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||||||| ||||||||||| |||| |||||| ||| | ||| | ||| |||| || Sbjct: 1150 taaggccccaaaatgaccgctaagtggcaaaggatgtgagaatgctgaaacaaccagaag 1209 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1210 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtagagcgttct 1269 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 380 ||||| ||| ||||||||| ||||||| ||||||||||||||||| Sbjct: 1270 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtggg 1314 Score = 133 bits (67), Expect = 6e-28 Identities = 113/126 (89%), Gaps = 3/126 (2%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgac--tggaca-tctaggg 57 ||||||||| ||||||||||||||||||||||||||| ||| || ||| | ||||||| Sbjct: 948 gctagctggatctccccgaaatgcgttgaggcgcagcggttaacgatgggctgtctaggg 1007 Query: 58 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 117 |||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||| Sbjct: 1008 gtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaat 1067 Query: 118 actaga 123 |||||| Sbjct: 1068 actaga 1073
>gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 382 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 793 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 115 aatac 119 ||||| Sbjct: 547 aatac 551 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||| ||||||||||||| Sbjct: 432 gctagctggttctccccgaaatgtgttgaggcgcagc 468
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5434418 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5434359 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5434358 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5434299 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5434298 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5434239 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 382 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5434238 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5434191 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 3897020 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 3897079 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 3897080 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 3897139 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 3897140 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 3897199 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 382 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 3897200 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 3897247 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2807139 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2807080 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2807079 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2807020 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2807019 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2806960 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 382 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2806959 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2806912 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 1005863 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 1005922 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 1005923 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 1005982 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 1005983 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 1006042 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 382 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 1006043 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 1006090 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 5434497 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5434438 Query: 115 aatac 119 ||||| Sbjct: 5434437 aatac 5434433 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 3896941 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 3897000 Query: 115 aatac 119 ||||| Sbjct: 3897001 aatac 3897005 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2807218 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2807159 Query: 115 aatac 119 ||||| Sbjct: 2807158 aatac 2807154 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 1005784 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 1005843 Query: 115 aatac 119 ||||| Sbjct: 1005844 aatac 1005848 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||| ||||||||||||| Sbjct: 5434552 gctagctggttctccccgaaatgtgttgaggcgcagc 5434516 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||| ||||||||||||| Sbjct: 3896886 gctagctggttctccccgaaatgtgttgaggcgcagc 3896922 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||| ||||||||||||| Sbjct: 2807273 gctagctggttctccccgaaatgtgttgaggcgcagc 2807237 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||| ||||||||||||| Sbjct: 1005729 gctagctggttctccccgaaatgtgttgaggcgcagc 1005765
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5944458 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5944399 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5944398 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5944339 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5944338 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5944279 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 382 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5944278 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5944231 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 4916814 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 4916755 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 4916754 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 4916695 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 4916694 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 4916635 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 382 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 4916634 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 4916587 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2503482 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2503541 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2503542 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2503601 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2503602 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2503661 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 382 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2503662 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2503709 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2378691 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2378750 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2378751 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2378810 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2378811 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2378870 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 382 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2378871 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2378918 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 5944537 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5944478 Query: 115 aatac 119 ||||| Sbjct: 5944477 aatac 5944473 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 4916893 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 4916834 Query: 115 aatac 119 ||||| Sbjct: 4916833 aatac 4916829 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2503403 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2503462 Query: 115 aatac 119 ||||| Sbjct: 2503463 aatac 2503467 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2378612 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2378671 Query: 115 aatac 119 ||||| Sbjct: 2378672 aatac 2378676 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||| ||||||||||||| Sbjct: 5944592 gctagctggttctccccgaaatgtgttgaggcgcagc 5944556 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||| ||||||||||||| Sbjct: 4916948 gctagctggttctccccgaaatgtgttgaggcgcagc 4916912 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||| ||||||||||||| Sbjct: 2503348 gctagctggttctccccgaaatgtgttgaggcgcagc 2503384 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||| ||||||||||||| Sbjct: 2378557 gctagctggttctccccgaaatgtgttgaggcgcagc 2378593
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 244 bits (123), Expect = 2e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 972 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 1031 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 1032 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 1091 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1092 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 1151 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 378 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 1152 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 1194 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 51 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 110 ||||||||||||||||||||||||||||||||| | | |||||||||||| |||||| Sbjct: 884 tctaggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaac 943 Query: 111 tctgaatactaga 123 || |||||||||| Sbjct: 944 tcagaatactaga 956 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||||||||||||||||| Sbjct: 831 gctagctggttctccccgaaatgcgttgaggcgcagc 867
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 244 bits (123), Expect = 2e-61 Identities = 227/259 (87%), Gaps = 2/259 (0%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 942 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1001 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1002 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1061 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1062 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1121 Query: 336 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 394 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1122 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1180 Query: 395 cggtaggggagcgttccgc 413 ||||||||||||||||||| Sbjct: 1181 cggtaggggagcgttccgc 1199 Score = 125 bits (63), Expect = 1e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 54 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 113 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 857 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 916 Query: 114 gaatact 120 ||||||| Sbjct: 917 gaatact 923 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||||||||||||||||| Sbjct: 802 gctagctggttctccccgaaatgcgttgaggcgcagc 838
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 244 bits (123), Expect = 2e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 2741 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 2800 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 2801 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 2860 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2861 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 2920 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 378 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 2921 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 2963 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 51 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 110 ||||||||||||||||||||||||||||||||| | | |||||||||||| |||||| Sbjct: 2653 tctaggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaac 2712 Query: 111 tctgaatactaga 123 || |||||||||| Sbjct: 2713 tcagaatactaga 2725 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||||||||||||||||| Sbjct: 2600 gctagctggttctccccgaaatgcgttgaggcgcagc 2636
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 244 bits (123), Expect = 2e-61 Identities = 227/259 (87%), Gaps = 2/259 (0%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 955 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1014 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1015 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1074 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1075 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1134 Query: 336 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 394 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1135 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1193 Query: 395 cggtaggggagcgttccgc 413 ||||||||||||||||||| Sbjct: 1194 cggtaggggagcgttccgc 1212 Score = 125 bits (63), Expect = 1e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 54 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 113 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 870 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 929 Query: 114 gaatact 120 ||||||| Sbjct: 930 gaatact 936 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||||||||||||||||| Sbjct: 815 gctagctggttctccccgaaatgcgttgaggcgcagc 851
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 244 bits (123), Expect = 2e-61 Identities = 227/259 (87%), Gaps = 2/259 (0%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 5529 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 5588 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 5589 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 5648 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 5649 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 5708 Query: 336 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 394 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 5709 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 5767 Query: 395 cggtaggggagcgttccgc 413 ||||||||||||||||||| Sbjct: 5768 cggtaggggagcgttccgc 5786 Score = 125 bits (63), Expect = 1e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 54 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 113 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5444 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 5503 Query: 114 gaatact 120 ||||||| Sbjct: 5504 gaatact 5510 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||||||||||||||||| Sbjct: 5389 gctagctggttctccccgaaatgcgttgaggcgcagc 5425
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 238 bits (120), Expect = 1e-59 Identities = 198/224 (88%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2482 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2541 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2542 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2601 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 ||||||||||||||||| |||||| ||||||||||||||||||||||| || ||||| | Sbjct: 2602 gtttgcctagaagcagcaacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2661 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 379 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2662 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2705 Score = 89.7 bits (45), Expect = 8e-15 Identities = 104/122 (85%), Gaps = 5/122 (4%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag---gg 57 ||||||||||||||||||||||| ||||||||||||| || | |||| | ||| || Sbjct: 2348 gctagctggttctccccgaaatgtgttgaggcgcagcggtag--tggaagtttagtcggg 2405 Query: 58 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 117 |||||||||||||||| |||||||| | || ||||||||| ||||||||||||||||| Sbjct: 2406 gtaaagcactgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctgaat 2465 Query: 118 ac 119 || Sbjct: 2466 ac 2467
>gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA gene, partial sequence Length = 2385 Score = 238 bits (120), Expect = 1e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| ||| |||| | | || |||||||||||||||| | |||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcactaagtgataaaggaggtgagattgcatagacaactagga 685 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcggtc 745 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 382 |||||| ||| ||||||||||||||| ||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggat 793 Score = 93.7 bits (47), Expect = 5e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 54 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 113 |||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| Sbjct: 486 aggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactca 545 Query: 114 gaatact 120 ||||||| Sbjct: 546 gaatact 552 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||| ||||||||||||| Sbjct: 432 gctagctggttctccccgaaatgtgttgaggcgcagc 468
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 238 bits (120), Expect = 1e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 1063 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 1064 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 1123 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 382 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 1124 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 1171 Score = 147 bits (74), Expect = 4e-32 Identities = 114/126 (90%), Gaps = 1/126 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaca-tctaggggt 59 ||||||||||||||||||||||||||||||||||||| ||| | | | | ||||||| Sbjct: 806 gctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgtttaggggt 865 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 866 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctgaatac 925 Query: 120 tagata 125 |||||| Sbjct: 926 tagata 931 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 446 gacgaagcggaagcgagaatgtcggc 471 ||||||||||||| |||||||||||| Sbjct: 1238 gacgaagcggaagtgagaatgtcggc 1263
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 238 bits (120), Expect = 1e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 25872 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 25873 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 25932 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 382 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 25933 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 25980 Score = 147 bits (74), Expect = 4e-32 Identities = 114/126 (90%), Gaps = 1/126 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaca-tctaggggt 59 ||||||||||||||||||||||||||||||||||||| ||| | | | | ||||||| Sbjct: 25615 gctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgtttaggggt 25674 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 25675 aaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctgaatac 25734 Query: 120 tagata 125 |||||| Sbjct: 25735 tagata 25740 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 446 gacgaagcggaagcgagaatgtcggc 471 ||||||||||||| |||||||||||| Sbjct: 26047 gacgaagcggaagtgagaatgtcggc 26072
>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial sequence Length = 2444 Score = 234 bits (118), Expect = 2e-58 Identities = 184/206 (89%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 335 ttgcgctgaagatgaacggggctaag 360 ||||| ||| ||||||||||||||| Sbjct: 746 ctgcgccgaaaatgaacggggctaag 771 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 |||||||||||||| |||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactctg 546 Query: 115 aatactagat 124 ||||| |||| Sbjct: 547 aataccagat 556 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||| ||||||||||||| Sbjct: 432 gctagctggttctccccgaaatgtgttgaggcgcagc 468
>gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, partial sequence Length = 2383 Score = 232 bits (117), Expect = 8e-58 Identities = 227/262 (86%), Gaps = 5/262 (1%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| ||| |||| | |||| ||||| |||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgagaaaggaggtgagagtgcatagacaactagga 685 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt----caaaat 390 || ||| ||| ||||||||||||||||||| | ||||||||||||||| | ||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggatttgttgaaaaat 804 Query: 391 gcatcggtaggggagcgttccg 412 |||||||||||||||||||| Sbjct: 805 aaatcggtaggggagcgttccg 826 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 115 aatac 119 ||||| Sbjct: 547 aatac 551 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||| ||| ||||||||| Sbjct: 432 gctagctggttctccccgaaatgtgtttaggcgcagc 468
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 230 bits (116), Expect = 3e-57 Identities = 198/224 (88%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 685 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 686 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 745 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 379 | ||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 746 t-cgccgaaaatgaacggggctaagttatctaccgaagctgtgg 788 Score = 89.7 bits (45), Expect = 8e-15 Identities = 104/122 (85%), Gaps = 5/122 (4%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag---gg 57 ||||||||||||||||||||||| ||||||||||||| || | |||| | ||| || Sbjct: 432 gctagctggttctccccgaaatgtgttgaggcgcagcggtag--tggaagtttagtcggg 489 Query: 58 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 117 |||||||||||||||| |||||||| | || ||||||||| ||||||||||||||||| Sbjct: 490 gtaaagcactgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctgaat 549 Query: 118 ac 119 || Sbjct: 550 ac 551
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 230 bits (116), Expect = 3e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| ||| |||| | |||| |||||||||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagacaactagga 685 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 382 | ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 103 bits (52), Expect = 5e-19 Identities = 107/122 (87%), Gaps = 5/122 (4%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gg 57 ||||||||||||||||||||||| ||| ||||||||| || ||| | | |||| | || Sbjct: 432 gctagctggttctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggg 489 Query: 58 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 117 |||||||||||||||||||||||||| | || ||||||||||||||| |||||||||||| Sbjct: 490 gtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaat 549 Query: 118 ac 119 || Sbjct: 550 ac 551 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 atcggtaggggagcgttccg 412 |||||||||||||||||||| Sbjct: 805 atcggtaggggagcgttccg 824
>gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosomal RNA gene, partial sequence Length = 2390 Score = 230 bits (116), Expect = 3e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 382 || ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 115 aatac 119 ||||| Sbjct: 547 aatac 551 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||| ||||||||||||| Sbjct: 432 gctagctggttctccccgaaatgtgttgaggcgcagc 468
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Minus Query: 157 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 216 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2050904 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 2050845 Query: 217 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 276 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 2050844 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 2050785 Query: 277 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 336 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2050784 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2050725 Query: 337 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 379 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 2050724 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 2050682 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 157 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 216 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1450597 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 1450656 Query: 217 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 276 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 1450657 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 1450716 Query: 277 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 336 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1450717 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1450776 Query: 337 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 379 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 1450777 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 1450819 Score = 79.8 bits (40), Expect = 7e-12 Identities = 90/104 (86%), Gaps = 2/104 (1%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg-acatctaggggt 59 ||||||||||||||||||||||||||||||||||||| || ||| || || | ||||| Sbjct: 2051038 gctagctggttctccccgaaatgcgttgaggcgcagc-gtcgacgggtacctggtggggt 2050980 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 103 | ||||||| ||||||||||| ||| |||| |||||||||||| Sbjct: 2050979 agagcactgaatcggtgcgggcggcgagagctgtaccaaatcga 2050936 Score = 79.8 bits (40), Expect = 7e-12 Identities = 90/104 (86%), Gaps = 2/104 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg-acatctaggggt 59 ||||||||||||||||||||||||||||||||||||| || ||| || || | ||||| Sbjct: 1450463 gctagctggttctccccgaaatgcgttgaggcgcagc-gtcgacgggtacctggtggggt 1450521 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 103 | ||||||| ||||||||||| ||| |||| |||||||||||| Sbjct: 1450522 agagcactgaatcggtgcgggcggcgagagctgtaccaaatcga 1450565 Score = 40.1 bits (20), Expect = 6.4 Identities = 59/72 (81%) Strand = Plus / Minus Query: 396 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 455 |||||||||||||||||| ||| | ||||| | |||||||| | || ||||| |||| Sbjct: 2050673 ggtaggggagcgttccgcagtagggtgaagcgtcagcgaaagcagacgtggacgaggcgg 2050614 Query: 456 aagcgagaatgt 467 ||| |||||||| Sbjct: 2050613 aagtgagaatgt 2050602
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 228 bits (115), Expect = 1e-56 Identities = 199/227 (87%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 137502 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 137561 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 137562 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 137621 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 382 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 137622 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 137668 Score = 228 bits (115), Expect = 1e-56 Identities = 199/227 (87%) Strand = Plus / Minus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 48042 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 47983 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 47982 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 47923 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 382 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 47922 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 47876 Score = 93.7 bits (47), Expect = 5e-16 Identities = 106/125 (84%), Gaps = 3/125 (2%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttg---actggacatctaggg 57 |||||||||||||| ||||||| ||||||||||||| |||| || || ||||||| Sbjct: 137301 gctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtctaggg 137360 Query: 58 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 117 |||||||||||||||||||||||||| | | |||||||||||| |||||||| |||| Sbjct: 137361 gtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcagaat 137420 Query: 118 actag 122 ||||| Sbjct: 137421 actag 137425 Score = 93.7 bits (47), Expect = 5e-16 Identities = 106/125 (84%), Gaps = 3/125 (2%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttg---actggacatctaggg 57 |||||||||||||| ||||||| ||||||||||||| |||| || || ||||||| Sbjct: 48243 gctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtctaggg 48184 Query: 58 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 117 |||||||||||||||||||||||||| | | |||||||||||| |||||||| |||| Sbjct: 48183 gtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcagaat 48124 Query: 118 actag 122 ||||| Sbjct: 48123 actag 48119
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 224 bits (113), Expect = 2e-55 Identities = 183/205 (89%), Gaps = 1/205 (0%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||| ||| |||| ||| || ||||| |||||||||||| ||||| ||||| ||||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagacaaccaggag 687 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 336 tgcgctgaagatgaacggggctaag 360 | ||| ||| ||||||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaag 771 Score = 113 bits (57), Expect = 5e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 115 aatac 119 ||||| Sbjct: 548 aatac 552 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||||||||||||||||| Sbjct: 433 gctagctggttctccccgaaatgcgttgaggcgcagc 469 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 446 gacgaagcggaagcgagaatgtcggc 471 ||||||||||||| |||||||||||| Sbjct: 857 gacgaagcggaagtgagaatgtcggc 882
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 224 bits (113), Expect = 2e-55 Identities = 197/225 (87%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 |||||||||| |||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1142 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1143 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1202 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 380 ||||| ||| ||||||||| ||||||| |||||||||||||||| Sbjct: 1203 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtggg 1247 Score = 131 bits (66), Expect = 2e-27 Identities = 112/125 (89%), Gaps = 3/125 (2%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgac--tggaca-tctaggg 57 ||||||||||||||||||||||||||||||||||||| ||||| || | ||||||| Sbjct: 881 gctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttgagctgtctaggg 940 Query: 58 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 117 |||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||| Sbjct: 941 gtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaat 1000 Query: 118 actag 122 ||||| Sbjct: 1001 actag 1005 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 446 gacgaagcggaagcgagaatgtcggc 471 ||||||||||||| |||||||||||| Sbjct: 1432 gacgaagcggaagtgagaatgtcggc 1457
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 224 bits (113), Expect = 2e-55 Identities = 266/316 (84%), Gaps = 2/316 (0%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 189991 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 189992 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 190051 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 395 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 190052 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 190109 Query: 396 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 455 ||||||||||||||| | |||| |||||| ||||||||||| || ||| || | | Sbjct: 190110 ggtaggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacag 190169 Query: 456 aagcgagaatgtcggc 471 ||| |||||||||||| Sbjct: 190170 aagtgagaatgtcggc 190185 Score = 224 bits (113), Expect = 2e-55 Identities = 266/316 (84%), Gaps = 2/316 (0%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 151418 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 151419 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 151478 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 395 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 151479 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 151536 Query: 396 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 455 ||||||||||||||| | |||| |||||| ||||||||||| || ||| || | | Sbjct: 151537 ggtaggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacag 151596 Query: 456 aagcgagaatgtcggc 471 ||| |||||||||||| Sbjct: 151597 aagtgagaatgtcggc 151612 Score = 143 bits (72), Expect = 6e-31 Identities = 109/120 (90%), Gaps = 1/120 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg-t 59 ||||||||||||||||||||||| ||||||||||||| ||||| |||| |||| | Sbjct: 189737 gctagctggttctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggt 189796 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 189797 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 189856 Score = 143 bits (72), Expect = 6e-31 Identities = 109/120 (90%), Gaps = 1/120 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg-t 59 ||||||||||||||||||||||| ||||||||||||| ||||| |||| |||| | Sbjct: 151164 gctagctggttctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggt 151223 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151224 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 151283
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 222 bits (112), Expect = 8e-55 Identities = 196/224 (87%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2481 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2540 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2541 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2600 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 ||||||||||| ||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2601 gtttgcctagaggcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2660 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 379 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2661 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2704 Score = 81.8 bits (41), Expect = 2e-12 Identities = 103/122 (84%), Gaps = 5/122 (4%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag---gg 57 ||||||||||||||||||||||| ||||||||||||| || | |||| | ||| || Sbjct: 2347 gctagctggttctccccgaaatgtgttgaggcgcagcggtag--tggaagtttagtcggg 2404 Query: 58 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 117 |||||||||||||||| |||||||| | || |||||||| ||||||||||||||||| Sbjct: 2405 gtaaagcactgtttcgccgcgggctgggagaccggtaccagggcgaggcaaactctgaat 2464 Query: 118 ac 119 || Sbjct: 2465 ac 2466
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 222 bits (112), Expect = 8e-55 Identities = 200/228 (87%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagacaactagga 685 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 382 | ||| ||| |||||||||||||||| || | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcaatgtaccgaagctgtgggat 792 Score = 95.6 bits (48), Expect = 1e-16 Identities = 106/122 (86%), Gaps = 5/122 (4%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gg 57 ||||||||||||||||||||||| ||| ||||||||| || ||| | | |||| | || Sbjct: 432 gctagctggttctccccgaaatgtgtttaggcgcagcggtaatgatt--aaatctggggg 489 Query: 58 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 117 |||||||||||||||||||||||||| | || ||||||||||||||| ||||||| |||| Sbjct: 490 gtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcagaat 549 Query: 118 ac 119 || Sbjct: 550 ac 551
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 222 bits (112), Expect = 8e-55 Identities = 196/224 (87%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 3327965 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 3328024 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 3328025 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 3328084 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 3328085 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 3328144 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 379 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 3328145 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 3328188 Score = 222 bits (112), Expect = 8e-55 Identities = 196/224 (87%) Strand = Plus / Minus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 2450763 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 2450704 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2450703 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2450644 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2450643 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2450584 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 379 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 2450583 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 2450540 Score = 83.8 bits (42), Expect = 5e-13 Identities = 102/121 (84%), Gaps = 2/121 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg-- 58 ||||||||||||||||||||||| ||| ||||||||| |||| | || || |||| Sbjct: 3327830 gctagctggttctccccgaaatgtgtttaggcgcagcggttgtaaagtcaacttgggggg 3327889 Query: 59 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 118 ||||||||||||||| ||||||| ||| |||| |||||||| ||||||||||| ||||| Sbjct: 3327890 taaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgaggcaaactcagaata 3327949 Query: 119 c 119 | Sbjct: 3327950 c 3327950 Score = 83.8 bits (42), Expect = 5e-13 Identities = 102/121 (84%), Gaps = 2/121 (1%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg-- 58 ||||||||||||||||||||||| ||| ||||||||| |||| | || || |||| Sbjct: 2450898 gctagctggttctccccgaaatgtgtttaggcgcagcggttgtaaagtcaacttgggggg 2450839 Query: 59 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 118 ||||||||||||||| ||||||| ||| |||| |||||||| ||||||||||| ||||| Sbjct: 2450838 taaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgaggcaaactcagaata 2450779 Query: 119 c 119 | Sbjct: 2450778 c 2450778
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 220 bits (111), Expect = 3e-54 Identities = 195/223 (87%) Strand = Plus / Plus Query: 157 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 216 |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 2313248 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 2313307 Query: 217 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 276 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 2313308 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 2313367 Query: 277 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 336 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2313368 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2313427 Query: 337 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 379 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 2313428 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 2313470 Score = 220 bits (111), Expect = 3e-54 Identities = 195/223 (87%) Strand = Plus / Minus Query: 157 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 216 |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 1108599 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 1108540 Query: 217 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 276 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 1108539 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 1108480 Query: 277 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 336 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1108479 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1108420 Query: 337 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 379 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 1108419 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 1108377 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||||||||||||||||| Sbjct: 2313114 gctagctggttctccccgaaatgcgttgaggcgcagc 2313150 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||||||||||||||||| Sbjct: 1108733 gctagctggttctccccgaaatgcgttgaggcgcagc 1108697
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 220 bits (111), Expect = 3e-54 Identities = 198/227 (87%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||||||| |||| ||||| |||| ||||||||||| | |||| | ||||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtgagaatgcagaaacagccaggag 1052 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1053 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1112 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 382 ||||| ||| || ||||| ||||||| ||||||||||| |||||| Sbjct: 1113 tgcgccgaaaattcacgggactaagcggcctgccgaagctatgggat 1159 Score = 117 bits (59), Expect = 3e-23 Identities = 109/125 (87%), Gaps = 3/125 (2%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttg---actggacatctaggg 57 ||||||||||||||||||||||||||||||||||||| |||| || || ||||||| Sbjct: 791 gctagctggttctccccgaaatgcgttgaggcgcagcggttggcgacgggctgtctaggg 850 Query: 58 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 117 ||||||||||||||||||||||||| || || |||||||||||| ||||||| |||| Sbjct: 851 gtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgtagcaaactaagaat 910 Query: 118 actag 122 ||||| Sbjct: 911 actag 915 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 atcggtaggggagcgttccg 412 |||||||||||||||||||| Sbjct: 1179 atcggtaggggagcgttccg 1198
>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 218 bits (110), Expect = 1e-53 Identities = 183/206 (88%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 335 ttgcgctgaagatgaacggggctaag 360 | ||| ||| ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaag 770 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 |||||||||||||| |||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactctg 546 Query: 115 aatactagat 124 ||||| |||| Sbjct: 547 aataccagat 556 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||| ||||||||||||| Sbjct: 432 gctagctggttctccccgaaatgtgttgaggcgcagc 468
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 216 bits (109), Expect = 5e-53 Identities = 196/225 (87%) Strand = Plus / Minus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||| ||||| ||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 2333871 gccagtcagacggtgggggataagcttcatcgtcgagagggaaacagcccagaccaccag 2333812 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| ||| |||| | | || |||| ||||||||||||| ||| ||||| |||||| Sbjct: 2333811 ctaaggtccccaaatcatcactaagtggcaaaggaggtggggatgctcagacaaccagga 2333752 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 2333751 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 2333692 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 379 ||||| ||| ||||||||| ||||| ||| | |||||||||||| Sbjct: 2333691 ctgcgccgaaaatgaacgggactaagtgatgtaccgaagctgtgg 2333647 Score = 105 bits (53), Expect = 1e-19 Identities = 62/65 (95%) Strand = Plus / Minus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 2333950 ggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactctg 2333891 Query: 115 aatac 119 ||||| Sbjct: 2333890 aatac 2333886 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggc 32 |||||||||||||||||||||| |||||||| Sbjct: 2334005 gctagctggttctccccgaaatatgttgaggc 2333974
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 216 bits (109), Expect = 5e-53 Identities = 190/217 (87%) Strand = Plus / Plus Query: 168 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 227 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 228 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 287 || | ||| |||| ||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 1470 ataatagctaagtggtaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 1529 Query: 288 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 347 ||||| | |||||||||||||||||||||||||||| || ||||| ||||||| ||| || Sbjct: 1530 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcttgcgccgaaaat 1589 Query: 348 gaacggggctaagcgatctgccgaagctgtgggatgt 384 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 1590 gaaagggactaagctatttgccgaagctgtgggatgt 1626 Score = 123 bits (62), Expect = 5e-25 Identities = 108/122 (88%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatct-aggggt 59 ||||||||||||||||||||||| ||||||||||||| ||| | | | || |||||| Sbjct: 1263 gctagctggttctccccgaaatgtgttgaggcgcagcggttaagattataacttaggggt 1322 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||| Sbjct: 1323 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactaagaatac 1382 Query: 120 ta 121 || Sbjct: 1383 ta 1384 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 catcggtaggggagcgttccg 412 ||||||||||||||||||||| Sbjct: 1672 catcggtaggggagcgttccg 1692
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 214 bits (108), Expect = 2e-52 Identities = 195/224 (87%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| ||| |||| | |||| | |||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagacaactagga 685 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 378 ||||| ||| |||||||||||| ||| || | ||||| ||||| Sbjct: 746 ctgcgccgaatatgaacggggctgagccatgtaccgaaactgtg 789 Score = 103 bits (52), Expect = 5e-19 Identities = 107/122 (87%), Gaps = 5/122 (4%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gg 57 ||||||||||||||||||||||| ||| ||||||||| || ||| | | |||| | || Sbjct: 432 gctagctggttctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggg 489 Query: 58 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 117 |||||||||||||||||||||||||| | || ||||||||||||||| |||||||||||| Sbjct: 490 gtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaat 549 Query: 118 ac 119 || Sbjct: 550 ac 551
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1076 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1077 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1136 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagct 375 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 1137 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 1176 Score = 127 bits (64), Expect = 4e-26 Identities = 111/126 (88%), Gaps = 3/126 (2%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctaggg 57 ||||||||||||||||||||||||||||||||||||| || ||| || ||||||| Sbjct: 814 gctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctaggg 873 Query: 58 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 117 ||||||| |||||||||||||||||||| ||||||||||||||| |||||||| |||| Sbjct: 874 gtaaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaat 933 Query: 118 actaga 123 |||||| Sbjct: 934 actaga 939 Score = 48.1 bits (24), Expect = 0.026 Identities = 63/76 (82%) Strand = Plus / Plus Query: 396 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 455 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 1208 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 1267 Query: 456 aagcgagaatgtcggc 471 ||| |||||||||||| Sbjct: 1268 aagtgagaatgtcggc 1283
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 2958 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 2959 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 3018 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagct 375 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 3019 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 3058 Score = 127 bits (64), Expect = 4e-26 Identities = 111/126 (88%), Gaps = 3/126 (2%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctaggg 57 ||||||||||||||||||||||||||||||||||||| || ||| || ||||||| Sbjct: 2696 gctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctaggg 2755 Query: 58 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 117 ||||||| |||||||||||||||||||| ||||||||||||||| |||||||| |||| Sbjct: 2756 gtaaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaat 2815 Query: 118 actaga 123 |||||| Sbjct: 2816 actaga 2821 Score = 48.1 bits (24), Expect = 0.026 Identities = 63/76 (82%) Strand = Plus / Plus Query: 396 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 455 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 3090 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 3149 Query: 456 aagcgagaatgtcggc 471 ||| |||||||||||| Sbjct: 3150 aagtgagaatgtcggc 3165
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 212 bits (107), Expect = 8e-52 Identities = 188/215 (87%) Strand = Plus / Plus Query: 168 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 227 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 228 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 287 ||| ||||| |||| |||||||||| |||||||||| |||| |||||||| ||||| Sbjct: 1059 atggccgctaagtggcaaaggaggtgaaaatgcaaagacaaccagaaggtttgcttagaa 1118 Query: 288 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 347 |||||||||||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 1119 gcagccacccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 1178 Query: 348 gaacggggctaagcgatctgccgaagctgtgggat 382 ||||||| ||||||| |||||||||||||||||| Sbjct: 1179 gaacgggactaagcggcctgccgaagctgtgggat 1213 Score = 89.7 bits (45), Expect = 8e-15 Identities = 106/124 (85%), Gaps = 3/124 (2%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgac--tggac-atctaggg 57 ||||||||| ||||| ||||||| ||||||||||||| ||||| ||| | | ||||| Sbjct: 846 gctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgatgggctagttaggg 905 Query: 58 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 117 |||||||||||||||||||||||||||| |||||||| |||||| ||||||| |||| Sbjct: 906 gtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaactaagaat 965 Query: 118 acta 121 |||| Sbjct: 966 acta 969
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 210 bits (106), Expect = 3e-51 Identities = 217/253 (85%), Gaps = 2/253 (0%) Strand = Plus / Minus Query: 158 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 217 |||||||| || ||||||||||||| ||| ||||||||||||||| ||| ||||| || Sbjct: 18092 agtgagacattgagggataagcttcaatgtcaagagggaaacagcccagattaccagtta 18033 Query: 218 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 277 |||||||||||| | || |||||||||||||||||| ||||| ||||| |||||||| Sbjct: 18032 aggcccctaaataattactaagtgataaaggaggtgggagtgcatagacaatcaggaggt 17973 Query: 278 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 337 ||||||||||||||| | |||||||||||||||||||||||||||| ||||| || | || Sbjct: 17972 ttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctg 17913 Query: 338 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 397 ||| ||| ||||| ||| ||||| || |||||||||||| ||||| |||| |||||| Sbjct: 17912 cgccgaaaatgaatgggactaagtaatttgccgaagctgtaagatgttaaaa--catcgg 17855 Query: 398 taggggagcgttc 410 ||||||||||||| Sbjct: 17854 taggggagcgttc 17842 Score = 210 bits (106), Expect = 3e-51 Identities = 217/253 (85%), Gaps = 2/253 (0%) Strand = Plus / Plus Query: 158 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 217 |||||||| || ||||||||||||| ||| ||||||||||||||| ||| ||||| || Sbjct: 2774 agtgagacattgagggataagcttcaatgtcaagagggaaacagcccagattaccagtta 2833 Query: 218 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 277 |||||||||||| | || |||||||||||||||||| ||||| ||||| |||||||| Sbjct: 2834 aggcccctaaataattactaagtgataaaggaggtgggagtgcatagacaatcaggaggt 2893 Query: 278 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 337 ||||||||||||||| | |||||||||||||||||||||||||||| ||||| || | || Sbjct: 2894 ttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctg 2953 Query: 338 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 397 ||| ||| ||||| ||| ||||| || |||||||||||| ||||| |||| |||||| Sbjct: 2954 cgccgaaaatgaatgggactaagtaatttgccgaagctgtaagatgttaaaa--catcgg 3011 Query: 398 taggggagcgttc 410 ||||||||||||| Sbjct: 3012 taggggagcgttc 3024 Score = 99.6 bits (50), Expect = 8e-18 Identities = 66/70 (94%), Gaps = 1/70 (1%) Strand = Plus / Minus Query: 53 taggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 111 |||||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||| Sbjct: 18178 taggggtaaagctactgttttggtgcgggctgcgagagcggtaccaaatcaaggcaaact 18119 Query: 112 ctgaatacta 121 |||||||||| Sbjct: 18118 ctgaatacta 18109 Score = 99.6 bits (50), Expect = 8e-18 Identities = 66/70 (94%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 53 taggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 111 |||||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||| Sbjct: 2688 taggggtaaagctactgttttggtgcgggctgcgagagcggtaccaaatcaaggcaaact 2747 Query: 112 ctgaatacta 121 |||||||||| Sbjct: 2748 ctgaatacta 2757 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||| ||||||||||||||||||||||||||| Sbjct: 18231 gctagctggatctccccgaaatgcgttgaggcgcagc 18195 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||| ||||||||||||||||||||||||||| Sbjct: 2635 gctagctggatctccccgaaatgcgttgaggcgcagc 2671
>gb|AY584521.1| Leptolyngbya sp. PCC 7104 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 208 bits (105), Expect = 1e-50 Identities = 196/225 (87%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 379 | ||| ||| |||||||||||||||| || |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcatcctaccgaagctgtgg 789 Score = 97.6 bits (49), Expect = 3e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactcag 546 Query: 115 aatac 119 ||||| Sbjct: 547 aatac 551 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||| ||||||| |||||||| |||| Sbjct: 432 gctagctggttctcctcgaaatgtgttgaggcacagc 468
>gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosomal RNA gene, partial sequence Length = 2340 Score = 208 bits (105), Expect = 1e-50 Identities = 180/205 (87%) Strand = Plus / Plus Query: 157 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 216 ||||||||| ||||||||||||| ||| ||||||||||||||||||| || |||||||| Sbjct: 567 cagtgagactgtgggggataagctccatggtcgagagggaaacagcccagaccaccagct 626 Query: 217 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 276 |||| ||| |||| |||||||||| ||||||||||| |||| ||||| |||||||| Sbjct: 627 aaggtccccaaattgtagctcagtgattaaggaggtgggattgcacagacaaccaggagg 686 Query: 277 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 336 ||||||||||||||||||||||| ||||||||||||||||||||||| || |||| | | Sbjct: 687 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgatcct 746 Query: 337 gcgctgaagatgaacggggctaagc 361 |||| ||| |||||||||||||||| Sbjct: 747 gcgccgaaaatgaacggggctaagc 771 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 485 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagacaaactccg 544 Query: 115 aatac 119 ||||| Sbjct: 545 aatac 549 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||| ||| |||| |||| Sbjct: 430 gctagctggttctccccgaaatgtgtttaggcacagc 466
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 208 bits (105), Expect = 1e-50 Identities = 196/225 (87%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 379 | ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcattctaccgaagctgtgg 789 Score = 111 bits (56), Expect = 2e-21 Identities = 105/120 (87%), Gaps = 1/120 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag-gggt 59 ||||||||||||||||||||||| ||| ||||||||| || | |||||| |||| Sbjct: 432 gctagctggttctccccgaaatgtgtttaggcgcagcggtaacgattaaatctagggggt 491 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 492 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcagaatac 551
>gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 206 bits (104), Expect = 5e-50 Identities = 195/224 (87%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 568 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 627 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 628 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 687 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 379 | ||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 790 Score = 83.8 bits (42), Expect = 5e-13 Identities = 102/121 (84%), Gaps = 2/121 (1%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg-- 58 ||||||||||||||||||||||| ||| ||||||||| |||| | || || |||| Sbjct: 433 gctagctggttctccccgaaatgtgtttaggcgcagcggttgtaaagtcaacttgggggg 492 Query: 59 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 118 ||||||||||||||| ||||||| ||| |||| |||||||| ||||||||||| ||||| Sbjct: 493 taaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgaggcaaactcagaata 552 Query: 119 c 119 | Sbjct: 553 c 553
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 206 bits (104), Expect = 5e-50 Identities = 249/296 (84%), Gaps = 6/296 (2%) Strand = Plus / Plus Query: 132 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 191 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 192 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 251 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 252 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 311 | ||||||| ||||| |||||||||||||||||||| ||||||||||||||| |||| | Sbjct: 1064 t-agggtgcatagacatccaggaggtttgcctagaagaagccaccctttaaagcgtgcat 1122 Query: 312 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 371 ||||||| ||||| | || ||||| | ||| ||||||| | |||| |||| | ||| Sbjct: 1123 aatagctaactgacaaacagctcttgcaccgaaaatgaacgagaataagagatccgtcga 1182 Query: 372 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 427 ||||||||||||| |||||||||||||||||||| ||||| ||||||||| Sbjct: 1183 agctgtgggatgt-----agcatcggtaggggagcgttcttccttatagggaagca 1233 Score = 129 bits (65), Expect = 9e-27 Identities = 114/129 (88%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 60 |||||||||||| ||||||||||| || ||||||||||||| || || |||||||||||| Sbjct: 805 gctagctggttcgccccgaaatgcatttaggcgcagcagtt-accgggcatctaggggta 863 Query: 61 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 120 ||||| ||||| |||||||| || |||||||||||||| |||||| ||| |||||||| Sbjct: 864 aagcattgttttggtgcgggtcacgagagcggtaccaaattgaggcagactatgaatact 923 Query: 121 agatatgac 129 ||||||||| Sbjct: 924 agatatgac 932
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 206 bits (104), Expect = 5e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 1084 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 323 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1132 Score = 87.7 bits (44), Expect = 3e-14 Identities = 105/123 (85%), Gaps = 3/123 (2%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgac--tggacatcta-ggg 57 ||||||||| ||||| ||||||||||||||||||||| |||| | ||| | | || ||| Sbjct: 824 gctagctggatctcctcgaaatgcgttgaggcgcagcggttgtcgatgggcttttaaggg 883 Query: 58 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 117 |||||||||||||||| ||||||||| | ||||||||||||||| ||||||| |||| Sbjct: 884 gtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaatcgttgcaaactaagaat 943 Query: 118 act 120 ||| Sbjct: 944 act 946 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 446 gacgaagcggaagcgagaatgtcgg 470 ||||||||||||| ||||||||||| Sbjct: 1261 gacgaagcggaagtgagaatgtcgg 1285
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 206 bits (104), Expect = 5e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 2822 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 323 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2823 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 2870 Score = 87.7 bits (44), Expect = 3e-14 Identities = 105/123 (85%), Gaps = 3/123 (2%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgac--tggacatcta-ggg 57 ||||||||| ||||| ||||||||||||||||||||| |||| | ||| | | || ||| Sbjct: 2562 gctagctggatctcctcgaaatgcgttgaggcgcagcggttgtcgatgggcttttaaggg 2621 Query: 58 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 117 |||||||||||||||| ||||||||| | ||||||||||||||| ||||||| |||| Sbjct: 2622 gtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaatcgttgcaaactaagaat 2681 Query: 118 act 120 ||| Sbjct: 2682 act 2684 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 446 gacgaagcggaagcgagaatgtcgg 470 ||||||||||||| ||||||||||| Sbjct: 2999 gacgaagcggaagtgagaatgtcgg 3023
>gb|AY584516.1| Lyngbya majuscula str. CCAP 1446/4 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 204 bits (103), Expect = 2e-49 Identities = 197/227 (86%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||| ||||| || |||||||||| ||||||||||||||||||||||| || | ||||| Sbjct: 565 ccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagc 624 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 625 taaggtccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggag 684 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 685 gtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 744 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 382 | ||| ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 745 t-cgccgaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 54 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 113 |||||||||||||||||||| ||||||||||| ||||||||||||| ||| |||||| Sbjct: 485 aggggtaaagcactgtttcgctgcgggctgcgagagcggtaccaaagtgagacaaactaa 544 Query: 114 gaatact 120 ||||||| Sbjct: 545 gaatact 551 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||| ||| ||||||||| Sbjct: 431 gctagctggttctccccgaaatgtgtttaggcgcagc 467
>gb|AY584515.1| Oscillatoria sp. strain CCAP 1459/13 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 204 bits (103), Expect = 2e-49 Identities = 197/227 (86%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 ||||| ||||| || |||||||||| ||||||||||||||||||||||| || | ||||| Sbjct: 565 ccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagc 624 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 ||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 625 taaggtccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggag 684 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 685 gtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 744 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 382 | ||| ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 745 t-cgccgaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 54 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 113 |||||||||||||||||||| ||||||||||| ||||||||||||| ||| |||||| Sbjct: 485 aggggtaaagcactgtttcgctgcgggctgcgagagcggtaccaaagtgagacaaactaa 544 Query: 114 gaatact 120 ||||||| Sbjct: 545 gaatact 551 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||| ||| ||||||||| Sbjct: 431 gctagctggttctccccgaaatgtgtttaggcgcagc 467
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 204 bits (103), Expect = 2e-49 Identities = 262/314 (83%), Gaps = 2/314 (0%) Strand = Plus / Plus Query: 158 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 217 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 218 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 277 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 189011 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 189070 Query: 278 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 337 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 189071 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 189130 Query: 338 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 397 ||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||||| Sbjct: 189131 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcgg 189188 Query: 398 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 457 ||||||||||||| | |||| |||||| ||||||||||| || ||| || | ||| Sbjct: 189189 taggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaa 189248 Query: 458 gcgagaatgtcggc 471 |||||||||||||| Sbjct: 189249 gcgagaatgtcggc 189262 Score = 204 bits (103), Expect = 2e-49 Identities = 262/314 (83%), Gaps = 2/314 (0%) Strand = Plus / Plus Query: 158 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 217 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 218 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 277 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 150568 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 150627 Query: 278 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 337 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 150628 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 150687 Query: 338 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 397 ||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||||| Sbjct: 150688 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcgg 150745 Query: 398 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 457 ||||||||||||| | |||| |||||| ||||||||||| || ||| || | ||| Sbjct: 150746 taggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaa 150805 Query: 458 gcgagaatgtcggc 471 |||||||||||||| Sbjct: 150806 gcgagaatgtcggc 150819 Score = 151 bits (76), Expect = 2e-33 Identities = 113/123 (91%), Gaps = 3/123 (2%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg--acatctagggg 58 ||||||||||||||||||||||| ||||||||||||| ||||| || | | |||||| Sbjct: 188814 gctagctggttctccccgaaatgtgttgaggcgcagcggttga-tgcttaaacttagggg 188872 Query: 59 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 118 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 188873 taaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaata 188932 Query: 119 cta 121 ||| Sbjct: 188933 cta 188935 Score = 151 bits (76), Expect = 2e-33 Identities = 113/123 (91%), Gaps = 3/123 (2%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg--acatctagggg 58 ||||||||||||||||||||||| ||||||||||||| ||||| || | | |||||| Sbjct: 150371 gctagctggttctccccgaaatgtgttgaggcgcagcggttga-tgcttaaacttagggg 150429 Query: 59 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 118 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 150430 taaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaata 150489 Query: 119 cta 121 ||| Sbjct: 150490 cta 150492
>gb|L43359.1|PZTCPRRNL Pterosperma cristatum large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 3371 Score = 202 bits (102), Expect = 7e-49 Identities = 192/222 (86%) Strand = Plus / Plus Query: 157 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 216 ||||||||| |||||||| ||||||||| ||||||||||||||||||| ||||||||| | Sbjct: 959 cagtgagactatgggggagaagcttcatagtcgagagggaaacagcccagatcaccagtt 1018 Query: 217 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 276 |||||||| ||| || ||| |||| |||||||||||| ||| |||||| |||||||| Sbjct: 1019 aaggccccaaaacgatagctaagtggaaaaggaggtgggcatgcgaagacaaccaggagg 1078 Query: 277 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 336 |||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | | Sbjct: 1079 tttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgttcct 1138 Query: 337 gcgctgaagatgaacggggctaagcgatctgccgaagctgtg 378 |||| ||| ||||| ||| ||||| |||||||||| ||||| Sbjct: 1139 gcgccgaaaatgaatgggactaagttatctgccgaaactgtg 1180 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 54 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 113 |||||||||||||||||||||||||||||||| || |||||||||||| |||||||| Sbjct: 874 aggggtaaagcactgtttcggtgcgggctgcgaaagtggtaccaaatcgtagcaaactca 933 Query: 114 gaatact 120 ||||||| Sbjct: 934 gaatact 940 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||| |||||| |||||||||||||||||||| Sbjct: 819 gctagctggatctccctgaaatgcgttgaggcgcagc 855
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 202 bits (102), Expect = 7e-49 Identities = 198/230 (86%) Strand = Plus / Minus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 114423 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 114364 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 114363 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 114304 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 384 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 114303 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 114254 Score = 202 bits (102), Expect = 7e-49 Identities = 198/230 (86%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 3094 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 3153 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 3154 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 3213 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 384 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 3214 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 3263 Score = 155 bits (78), Expect = 2e-34 Identities = 112/122 (91%), Gaps = 1/122 (0%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatct-aggggt 59 ||||||||||||||||||||||| ||||||||||||| ||||| | | || |||||| Sbjct: 114617 gctagctggttctccccgaaatgtgttgaggcgcagcggttgagattataacttaggggt 114558 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 114557 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 114498 Query: 120 ta 121 || Sbjct: 114497 ta 114496 Score = 155 bits (78), Expect = 2e-34 Identities = 112/122 (91%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatct-aggggt 59 ||||||||||||||||||||||| ||||||||||||| ||||| | | || |||||| Sbjct: 2900 gctagctggttctccccgaaatgtgttgaggcgcagcggttgagattataacttaggggt 2959 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2960 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 3019 Query: 120 ta 121 || Sbjct: 3020 ta 3021 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 catcggtaggggagcgttccg 412 ||||||||||||||||||||| Sbjct: 114237 catcggtaggggagcgttccg 114217 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 catcggtaggggagcgttccg 412 ||||||||||||||||||||| Sbjct: 3280 catcggtaggggagcgttccg 3300
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 200 bits (101), Expect = 3e-48 Identities = 195/225 (86%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| ||||||||| ||| |||| ||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccctaaatggatgctaagtggtaaaggaggtgggattgcagagacaaccagga 685 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 379 | ||| ||| ||||||||| |||||| || |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacgggactaagcatcctaccgaagctgtgg 789 Score = 103 bits (52), Expect = 5e-19 Identities = 104/120 (86%), Gaps = 1/120 (0%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg-t 59 ||||||||||||||| ||||||| |||||||| |||| |||| ||| || |||| | Sbjct: 432 gctagctggttctcctcgaaatgtgttgaggcacagcggttgtgattacagctggggggt 491 Query: 60 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 ||||||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 492 aaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactcagaatac 551
>gb|AC007729.3| Arabidopsis thaliana chromosome 2 BAC T18C6 genomic sequence, complete sequence Length = 114068 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 189 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 248 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 57141 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 57082 Query: 249 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 307 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 57081 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 57022 Query: 308 gcgtaatagctcactg 323 |||||||||||||||| Sbjct: 57021 gcgtaatagctcactg 57006
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 196 bits (99), Expect = 5e-47 Identities = 217/255 (85%), Gaps = 1/255 (0%) Strand = Plus / Plus Query: 157 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 216 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| | Sbjct: 2691 cagtgagactgtgggggataagctccattgtcaagagggaaacagcccagagcaccagtt 2750 Query: 217 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 276 ||||||||||||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 2751 aaggcccctaaataattgctaagtgataaaggaggtgggagtgcatagacaatcaggagg 2810 Query: 277 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 336 ||||| |||||||||| | |||||||||||||||||||||||||||||||||| | | Sbjct: 2811 tttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactgatcgagtaaacct 2870 Query: 337 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt-caaaatgcatc 395 |||| ||| ||| ||||| ||||| || ||||||| ||||| ||| | ||||| ||| Sbjct: 2871 gcgccgaaaatgtacgggactaagtaatttgccgaaactgtgcgatatataaaatatatc 2930 Query: 396 ggtaggggagcgttc 410 ||||||||||||||| Sbjct: 2931 ggtaggggagcgttc 2945 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||||||| ||||||||| Sbjct: 2554 gctagctggttctccccgaaatgcgtttaggcgcagc 2590
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 196 bits (99), Expect = 5e-47 Identities = 186/215 (86%) Strand = Plus / Plus Query: 168 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 227 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 192889 Query: 228 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 287 ||| ||||| |||| |||||||||| |||| ||||| |||| |||||||| ||||| Sbjct: 192890 atggccgctaagtggcaaaggaggtgaaaatgcagagacaaccagaaggtttgcttagaa 192949 Query: 288 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 347 ||||||| |||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 192950 gcagccatccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 193009 Query: 348 gaacggggctaagcgatctgccgaagctgtgggat 382 ||||||| ||||||| |||||||||||||||||| Sbjct: 193010 gaacgggactaagcggcctgccgaagctgtgggat 193044 Score = 196 bits (99), Expect = 5e-47 Identities = 186/215 (86%) Strand = Plus / Minus Query: 168 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 227 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 143893 Query: 228 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 287 ||| ||||| |||| |||||||||| |||| ||||| |||| |||||||| ||||| Sbjct: 143892 atggccgctaagtggcaaaggaggtgaaaatgcagagacaaccagaaggtttgcttagaa 143833 Query: 288 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 347 ||||||| |||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 143832 gcagccatccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 143773 Query: 348 gaacggggctaagcgatctgccgaagctgtgggat 382 ||||||| ||||||| |||||||||||||||||| Sbjct: 143772 gaacgggactaagcggcctgccgaagctgtgggat 143738 Score = 97.6 bits (49), Expect = 3e-17 Identities = 107/124 (86%), Gaps = 3/124 (2%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgac--tggac-atctaggg 57 ||||||||| ||||| ||||||| ||||||||||||| ||||| ||| | || ||||| Sbjct: 192677 gctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgatgggctatttaggg 192736 Query: 58 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 117 |||||||||||||||||||||||||||| |||||||| |||||| ||||||| |||| Sbjct: 192737 gtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaactaagaat 192796 Query: 118 acta 121 |||| Sbjct: 192797 acta 192800 Score = 97.6 bits (49), Expect = 3e-17 Identities = 107/124 (86%), Gaps = 3/124 (2%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgac--tggac-atctaggg 57 ||||||||| ||||| ||||||| ||||||||||||| ||||| ||| | || ||||| Sbjct: 144105 gctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgatgggctatttaggg 144046 Query: 58 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 117 |||||||||||||||||||||||||||| |||||||| |||||| ||||||| |||| Sbjct: 144045 gtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaactaagaat 143986 Query: 118 acta 121 |||| Sbjct: 143985 acta 143982
>gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3875 Score = 196 bits (99), Expect = 5e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||||||||| |||| |||||| ||||||||| ||||||||||||||| || || ||| Sbjct: 969 gccagtgagacggtgggcgataaggttcatcgtcaagagggaaacagcccagaccatcag 1028 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||||||| ||||| ||||| |||| |||||||||| | ||| | ||| |||||| Sbjct: 1029 ctaaggccccaaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccagga 1088 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||| |||||||||||| |||||||||||||||||||||||||||| | |||| | Sbjct: 1089 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtaaagcgttc 1148 Query: 335 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 381 |||||| ||| |||| |||| ||||||| ||||||||||||||||| Sbjct: 1149 ttgcgccgaaaatgatcgggactaagcggcctgccgaagctgtggga 1195 Score = 89.7 bits (45), Expect = 8e-15 Identities = 66/73 (90%) Strand = Plus / Plus Query: 51 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 110 |||||||||||||| |||||||| ||||||||||| ||||||||||||||| ||||||| Sbjct: 882 tctaggggtaaagctctgtttcgatgcgggctgcgaaagcggtaccaaatcgtggcaaac 941 Query: 111 tctgaatactaga 123 | |||||||||| Sbjct: 942 taagaatactaga 954 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||||||||||||||||||| Sbjct: 829 gctagctggttctccccgaaatgcgttgaggcgcagc 865 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 tcggtaggggagcgttccgcc 414 ||||||||||||||||||||| Sbjct: 1217 tcggtaggggagcgttccgcc 1237
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1659443 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1659502 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1659503 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1659562 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 1659563 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 1659622 Query: 335 ttgcgctgaagatgaacggggctaag 360 ||||| ||| ||||||||||||||| Sbjct: 1659623 ctgcgccgaaaatgaacggggctaag 1659648 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Minus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1049301 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1049242 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1049241 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1049182 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 1049181 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 1049122 Query: 335 ttgcgctgaagatgaacggggctaag 360 ||||| ||| ||||||||||||||| Sbjct: 1049121 ctgcgccgaaaatgaacggggctaag 1049096 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1659364 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1659423 Query: 115 aatac 119 ||||| Sbjct: 1659424 aatac 1659428 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1049380 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1049321 Query: 115 aatac 119 ||||| Sbjct: 1049320 aatac 1049316 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcg 33 |||||||||||||||||||||| |||||||||| Sbjct: 1659309 gctagctggttctccccgaaatacgttgaggcg 1659341 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcg 33 |||||||||||||||||||||| |||||||||| Sbjct: 1049435 gctagctggttctccccgaaatacgttgaggcg 1049403
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 194 bits (98), Expect = 2e-46 Identities = 218/258 (84%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 215 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 216 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 275 |||||||||||||| | || |||| |||||||||| | ||| ||||| |||| || Sbjct: 995 taaggcccctaaataatttctaagtgggaaaggaggtgagaatgctgagacaaccagaag 1054 Query: 276 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 335 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| | Sbjct: 1055 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggttaagcgtttt 1114 Query: 336 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 395 ||||| ||| ||| |||| ||||| || ||||||||||||||||| || || ||| Sbjct: 1115 tgcgccgaaaatgctcgggactaagaaatttgccgaagctgtgggatatcgtaagatatc 1174 Query: 396 ggtaggggagcgttccgc 413 |||||||||||||||||| Sbjct: 1175 ggtaggggagcgttccgc 1192 Score = 121 bits (61), Expect = 2e-24 Identities = 108/123 (87%), Gaps = 3/123 (2%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttg---actggacatctaggg 57 ||||||||| ||||||||||||||||||||||||||| |||| | || | || |||| Sbjct: 794 gctagctggatctccccgaaatgcgttgaggcgcagcggttgttgatgggtcgtcaaggg 853 Query: 58 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 117 |||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||| Sbjct: 854 gtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaat 913 Query: 118 act 120 ||| Sbjct: 914 act 916 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 446 gacgaagcggaagcgagaatgtcgg 470 ||||||||||||| ||||||||||| Sbjct: 1225 gacgaagcggaagtgagaatgtcgg 1249
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1205 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1264 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1265 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1324 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 1325 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 1384 Query: 335 ttgcgctgaagatgaacggggctaag 360 ||||| ||| ||||||||||||||| Sbjct: 1385 ctgcgccgaaaatgaacggggctaag 1410 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1126 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1185 Query: 115 aatac 119 ||||| Sbjct: 1186 aatac 1190 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcg 33 |||||||||||||||||||||| |||||||||| Sbjct: 1071 gctagctggttctccccgaaatacgttgaggcg 1103
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Minus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 2657343 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 2657284 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 2657283 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 2657224 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2657223 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 2657164 Query: 335 ttgcgctgaagatgaacggggctaag 360 ||||| ||| ||||||||||||||| Sbjct: 2657163 ctgcgccgaaaatgaacggggctaag 2657138 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 155 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 214 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 571578 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 571637 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 571638 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 571697 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 571698 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 571757 Query: 335 ttgcgctgaagatgaacggggctaag 360 ||||| ||| ||||||||||||||| Sbjct: 571758 ctgcgccgaaaatgaacggggctaag 571783 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 2657422 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 2657363 Query: 115 aatac 119 ||||| Sbjct: 2657362 aatac 2657358 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 571499 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 571558 Query: 115 aatac 119 ||||| Sbjct: 571559 aatac 571563 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcg 33 |||||||||||||||||||||| |||||||||| Sbjct: 2657477 gctagctggttctccccgaaatacgttgaggcg 2657445 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcg 33 |||||||||||||||||||||| |||||||||| Sbjct: 571444 gctagctggttctccccgaaatacgttgaggcg 571476
>gb|L49154.1|MNXCPRGOLA Monomastix sp. OKE-1 large subunit ribosomal RNA gene, partial sequence; and putative protein genes, complete cds; chloroplast Length = 6151 Score = 192 bits (97), Expect = 7e-46 Identities = 190/221 (85%) Strand = Plus / Plus Query: 158 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 217 |||||||| |||| |||||| ||||| ||| ||||||||||||||| |||||||||||| Sbjct: 964 agtgagacagtgggcgataaggttcattgtcaagagggaaacagcccagatcaccagcta 1023 Query: 218 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 277 |||||||||||| | || |||| ||||||||||||| |||| |||||||||| |||| Sbjct: 1024 aggcccctaaataagtactaagtggtaaaggaggtgggagtgctaagacagccaaaaggt 1083 Query: 278 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 337 ||||||||||||||||| |||| || |||||||||| |||||| || |||||||| |||| Sbjct: 1084 ttgcctagaagcagccatccttgaacgagtgcgtaacagctcattggtcgagcgctcttg 1143 Query: 338 cgctgaagatgaacggggctaagcgatctgccgaagctgtg 378 ||| ||| ||||||||| ||||| | ||||||||||||| Sbjct: 1144 cgccgaaaatgaacgggactaagtactttgccgaagctgtg 1184 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 111 ||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||| Sbjct: 878 ggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtagcaaact 934 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagc 37 |||||||||||||||||||||||| || ||| ||||| Sbjct: 821 gctagctggttctccccgaaatgcatttaggtgcagc 857
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 192 bits (97), Expect = 7e-46 Identities = 220/257 (85%), Gaps = 3/257 (1%) Strand = Plus / Plus Query: 156 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 214 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 215 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 274 ||||||||||| ||||| || ||||| ||||| ||| | ||||| ||||| |||| | Sbjct: 1013 ctaaggcccctcaatgattcctaagtgacgaaggatgtgagagtgcagagacaaccagaa 1072 Query: 275 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 334 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 1132 Query: 335 ttgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgca 393 | |||| ||| ||||| ||| || ||| |||||||||||| |||| |||| ||| | || Sbjct: 1133 tggcgccgaaaatgaaagggactcaaggaatctgccgaagccgtggcatgt-aaattaca 1191 Query: 394 tcggtaggggagcgttc 410 | ||||||||||||||| Sbjct: 1192 tgggtaggggagcgttc 1208 Score = 157 bits (79), Expect = 4e-35 Identities = 114/125 (91%), Gaps = 3/125 (2%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggacatctaggg 57 ||||||||||||||||||||||||||||||||||||| || | | || |||||||| Sbjct: 811 gctagctggttctccccgaaatgcgttgaggcgcagcggtgggtttagggctatctaggg 870 Query: 58 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 117 |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 871 gtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctgaat 930 Query: 118 actag 122 ||||| Sbjct: 931 actag 935
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 192 bits (97), Expect = 7e-46 Identities = 178/205 (86%) Strand = Plus / Minus Query: 157 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 216 ||||||||| ||||||||||||| ||| ||||||||||||||||||| || ||||| || Sbjct: 1569819 cagtgagactgtgggggataagctccatggtcgagagggaaacagcccagaccaccaact 1569760 Query: 217 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 276 |||| ||| |||| |||||||||| ||||||||||| |||| ||||| |||||||| Sbjct: 1569759 aaggtccccaaattgtagctcagtgattaaggaggtgggattgcacagacaaccaggagg 1569700 Query: 277 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 336 || |||||||||||||||||||| ||||||||||||||||||||||| || |||| | | Sbjct: 1569699 ttggcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgatcct 1569640 Query: 337 gcgctgaagatgaacggggctaagc 361 |||| ||| |||||||||||||||| Sbjct: 1569639 gcgccgaaaatgaacggggctaagc 1569615 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 55 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 114 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1569901 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagccaaactccg 1569842 Query: 115 aatac 119 ||||| Sbjct: 1569841 aatac 1569837 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 3 tagctggttctccccgaaatgcgttgaggcgcagc 37 ||||||||||||||||||||| ||| |||| |||| Sbjct: 1569954 tagctggttctccccgaaatgtgtttaggcacagc 1569920
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 192 bits (97), Expect = 7e-46 Identities = 181/209 (86%) Strand = Plus / Plus Query: 168 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 227 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| |||||| Sbjct: 3172 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccctaa 3231 Query: 228 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 287 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 3232 ataagcgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 3291 Query: 288 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 347 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 3292 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 3351 Query: 348 gaacggggctaagcgatctgccgaagctg 376 ||||||||||||||| | | ||||||||| Sbjct: 3352 gaacggggctaagcgttttaccgaagctg 3380 Score = 91.7 bits (46), Expect = 2e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 55 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 113 |||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 114 gaatac 119 |||||| Sbjct: 3139 gaatac 3144 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcg 33 |||||||||||||||||||||| |||| ||||| Sbjct: 3024 gctagctggttctccccgaaatacgtttaggcg 3056
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 57 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 116 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 59055 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 58996 Query: 117 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 176 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 58995 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 58937 Query: 177 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 222 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 58936 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 58890 Score = 109 bits (55), Expect = 8e-21 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 211 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 264 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 58891 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 58832 Query: 265 acagccaggaggtttgcctagaagcagccaccctttaaagag 306 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 58831 acaaccaggaggtttgcctagaagcagccaccctttaaagag 58790 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 372 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 |||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 58791 agctatgggatatcaaaatgcatcggtaggggagcgttccgccttag 58745
>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0672D01 Length = 146954 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 57 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 116 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 136266 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 136207 Query: 117 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 176 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 136206 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 136148 Query: 177 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 222 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 136147 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 136101 Score = 109 bits (55), Expect = 8e-21 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 211 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 264 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 136102 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 136043 Query: 265 acagccaggaggtttgcctagaagcagccaccctttaaagag 306 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 136042 acaaccaggaggtttgcctagaagcagccaccctttaaagag 136001 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 372 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 418 |||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 136002 agctatgggatatcaaaatgcatcggtaggggagcgttccgccttag 135956
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 184 bits (93), Expect = 2e-43 Identities = 180/209 (86%) Strand = Plus / Plus Query: 168 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 227 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 320554 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 320613 Query: 228 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 287 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 320614 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 320673 Query: 288 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 347 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 320674 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 320733 Query: 348 gaacggggctaagcgatctgccgaagctg 376 ||||||||||||||| | | ||||||||| Sbjct: 320734 gaacggggctaagcgttataccgaagctg 320762 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcg 33 |||||||||||||||||||||| |||||||||| Sbjct: 320406 gctagctggttctccccgaaatacgttgaggcg 320438 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 69 tttcggtgcgggctgcgcgagcggtaccaaatcga 103 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 184 bits (93), Expect = 2e-43 Identities = 168/193 (87%) Strand = Plus / Minus Query: 168 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 227 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 2137829 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 2137770 Query: 228 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 287 || | | || |||||||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 2137769 atcaacactaagtgataaaggaggtgggattgcatagacaaccaggaggtttgcctagaa 2137710 Query: 288 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 347 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 2137709 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 2137650 Query: 348 gaacggggctaag 360 ||||||||||||| Sbjct: 2137649 gaacggggctaag 2137637 Score = 184 bits (93), Expect = 2e-43 Identities = 168/193 (87%) Strand = Plus / Plus Query: 168 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 227 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 477031 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 477090 Query: 228 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 287 || | | || |||||||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 477091 atcaacactaagtgataaaggaggtgggattgcatagacaaccaggaggtttgcctagaa 477150 Query: 288 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 347 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 477151 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 477210 Query: 348 gaacggggctaag 360 ||||||||||||| Sbjct: 477211 gaacggggctaag 477223 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 69 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2137907 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 2137857 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 69 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 119 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 476953 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 477003 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 1 gctagctggttctccccgaaatgcgttgaggcg 33 |||||||||||||||||||||| |||||||||| Sbjct: 2137977 gctagctggttctccccgaaatacgttgaggcg 2137945 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 1 gctagctggttctccccgaaatgcgttgaggcg 33 |||||||||||||||||||||| |||||||||| Sbjct: 476883 gctagctggttctccccgaaatacgttgaggcg 476915 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,830,603 Number of Sequences: 3902068 Number of extensions: 2830603 Number of successful extensions: 54742 Number of sequences better than 10.0: 2374 Number of HSP's better than 10.0 without gapping: 2405 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 40322 Number of HSP's gapped (non-prelim): 13767 length of query: 471 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 449 effective length of database: 17,147,199,772 effective search space: 7699092697628 effective search space used: 7699092697628 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
