ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd27f18 |
|---|---|
| Clone Library Name | barley_pub |
>RAD23_ORYSA (Q40742) Putative DNA repair protein RAD23 (OsRAD23)| Length = 392 Score = 105 bits (263), Expect = 9e-23 Identities = 50/74 (67%), Positives = 63/74 (85%) Frame = +3 Query: 84 MKLNVKTLKGTSFEIEATPESSVGEVKRIIESAQGQNVYPADQLMIIYQGKILKDDTTLD 263 MK++VKTLKG++F+IE V +VKRIIE+ QGQ++YPA+Q M+I+QGK+LKDDTTLD Sbjct: 1 MKISVKTLKGSTFQIEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDTTLD 60 Query: 264 ANKVAENSFLVIML 305 NKV ENSFLVIML Sbjct: 61 ENKVLENSFLVIML 74 Score = 36.6 bits (83), Expect(2) = 0.011 Identities = 17/27 (62%), Positives = 20/27 (74%) Frame = +1 Query: 541 DVYSQAASNLVSGGILEQTVQQILDMG 621 D Y QA SNLV+G LE T+Q IL+MG Sbjct: 143 DNYGQATSNLVAGSNLEATIQSILEMG 169 Score = 21.6 bits (44), Expect(2) = 0.011 Identities = 7/12 (58%), Positives = 9/12 (75%) Frame = +2 Query: 611 LTWGGGTWERDM 646 L GGG W+RD+ Sbjct: 166 LEMGGGIWDRDI 177
>RD23C_ARATH (Q84L31) Putative DNA repair protein RAD23-3 (RAD23-like protein 3)| (AtRAD23-3) Length = 419 Score = 100 bits (250), Expect = 3e-21 Identities = 49/74 (66%), Positives = 62/74 (83%) Frame = +3 Query: 84 MKLNVKTLKGTSFEIEATPESSVGEVKRIIESAQGQNVYPADQLMIIYQGKILKDDTTLD 263 MK+ VKTLKGT FEIE PE SV +VK+ IES QG +VYPA + M+I+QGK+LKD+TT++ Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60 Query: 264 ANKVAENSFLVIML 305 NKVAENSF+VIM+ Sbjct: 61 ENKVAENSFIVIMM 74 Score = 43.1 bits (100), Expect = 7e-04 Identities = 20/27 (74%), Positives = 22/27 (81%) Frame = +1 Query: 541 DVYSQAASNLVSGGILEQTVQQILDMG 621 DVY QAASNL +G LE T+QQILDMG Sbjct: 172 DVYGQAASNLAAGSNLESTIQQILDMG 198
>RD23D_ARATH (Q84L30) Putative DNA repair protein RAD23-4 (RAD23-like protein 4)| (AtRAD23-4) Length = 378 Score = 84.0 bits (206), Expect = 4e-16 Identities = 42/74 (56%), Positives = 55/74 (74%) Frame = +3 Query: 84 MKLNVKTLKGTSFEIEATPESSVGEVKRIIESAQGQNVYPADQLMIIYQGKILKDDTTLD 263 MK+ VKTL G++FEIE P V +VK IE+ +G YPA + M+I+QGK+LKD+TTL+ Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 59 Query: 264 ANKVAENSFLVIML 305 N V ENSF+VIML Sbjct: 60 ENNVVENSFIVIML 73 Score = 45.1 bits (105), Expect(2) = 2e-05 Identities = 22/27 (81%), Positives = 23/27 (85%) Frame = +1 Query: 541 DVYSQAASNLVSGGILEQTVQQILDMG 621 DVY QAASNLV+G LE TVQQILDMG Sbjct: 133 DVYGQAASNLVAGTTLESTVQQILDMG 159 Score = 22.3 bits (46), Expect(2) = 2e-05 Identities = 7/13 (53%), Positives = 10/13 (76%) Frame = +2 Query: 605 KFLTWGGGTWERD 643 + L GGG+W+RD Sbjct: 154 QILDMGGGSWDRD 166
>RD23A_ARATH (Q84L33) Putative DNA repair protein RAD23-1 (RAD23-like protein 1)| (AtRAD23-1) Length = 371 Score = 82.0 bits (201), Expect = 1e-15 Identities = 39/74 (52%), Positives = 53/74 (71%) Frame = +3 Query: 84 MKLNVKTLKGTSFEIEATPESSVGEVKRIIESAQGQNVYPADQLMIIYQGKILKDDTTLD 263 MKL VKTLKG+ FEI P ++ VK+ IE +QG++ YP Q ++I+ GK+LKD+T+L Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60 Query: 264 ANKVAENSFLVIML 305 NKV E FLV+ML Sbjct: 61 ENKVTEEGFLVVML 74 Score = 40.0 bits (92), Expect = 0.006 Identities = 19/27 (70%), Positives = 21/27 (77%) Frame = +1 Query: 541 DVYSQAASNLVSGGILEQTVQQILDMG 621 D Y QAAS LVSG LEQ VQQI++MG Sbjct: 133 DTYGQAASTLVSGSSLEQMVQQIMEMG 159
>RD23B_ARATH (Q84L32) Putative DNA repair protein RAD23-2 (RAD23-like protein 2)| (AtRAD23-2) Length = 368 Score = 80.9 bits (198), Expect = 3e-15 Identities = 39/74 (52%), Positives = 52/74 (70%) Frame = +3 Query: 84 MKLNVKTLKGTSFEIEATPESSVGEVKRIIESAQGQNVYPADQLMIIYQGKILKDDTTLD 263 MKL VKTLKG+ FEI P ++ VK+ IE +Q ++ YP Q ++I+ GK+LKD+TTL Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60 Query: 264 ANKVAENSFLVIML 305 NKV E FLV+ML Sbjct: 61 ENKVTEEGFLVVML 74 Score = 39.3 bits (90), Expect = 0.010 Identities = 18/27 (66%), Positives = 21/27 (77%) Frame = +1 Query: 541 DVYSQAASNLVSGGILEQTVQQILDMG 621 D Y QAAS LVSG +EQ VQQI++MG Sbjct: 131 DTYGQAASTLVSGSSIEQMVQQIMEMG 157
>RD23B_MOUSE (P54728) UV excision repair protein RAD23 homolog B (mHR23B) (XP-C| repair-complementing complex 58 kDa protein) (p58) Length = 416 Score = 63.5 bits (153), Expect = 5e-10 Identities = 30/74 (40%), Positives = 49/74 (66%) Frame = +3 Query: 84 MKLNVKTLKGTSFEIEATPESSVGEVKRIIESAQGQNVYPADQLMIIYQGKILKDDTTLD 263 M++ +KTL+ +F+I+ PE +V +K IES +G++ +P +IY GKIL DDT L Sbjct: 1 MQVTLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILSDDTALK 60 Query: 264 ANKVAENSFLVIML 305 K+ E +F+V+M+ Sbjct: 61 EYKIDEKNFVVVMV 74
>RD23B_HUMAN (P54727) UV excision repair protein RAD23 homolog B (hHR23B) (XP-C| repair-complementing complex 58 kDa protein) (p58) Length = 409 Score = 63.5 bits (153), Expect = 5e-10 Identities = 30/74 (40%), Positives = 49/74 (66%) Frame = +3 Query: 84 MKLNVKTLKGTSFEIEATPESSVGEVKRIIESAQGQNVYPADQLMIIYQGKILKDDTTLD 263 M++ +KTL+ +F+I+ PE +V +K IES +G++ +P +IY GKIL DDT L Sbjct: 1 MQVTLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILNDDTALK 60 Query: 264 ANKVAENSFLVIML 305 K+ E +F+V+M+ Sbjct: 61 EYKIDEKNFVVVMV 74
>RD23A_HUMAN (P54725) UV excision repair protein RAD23 homolog A (hHR23A)| Length = 363 Score = 53.1 bits (126), Expect = 7e-07 Identities = 24/72 (33%), Positives = 45/72 (62%) Frame = +3 Query: 90 LNVKTLKGTSFEIEATPESSVGEVKRIIESAQGQNVYPADQLMIIYQGKILKDDTTLDAN 269 + +KTL+ +F+I P+ +V +K IE+ +G++ +P +IY GKIL DD + Sbjct: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64 Query: 270 KVAENSFLVIML 305 ++ E +F+V+M+ Sbjct: 65 RIDEKNFVVVMV 76
>RD23A_MOUSE (P54726) UV excision repair protein RAD23 homolog A (mHR23A)| Length = 363 Score = 52.0 bits (123), Expect = 2e-06 Identities = 24/72 (33%), Positives = 44/72 (61%) Frame = +3 Query: 90 LNVKTLKGTSFEIEATPESSVGEVKRIIESAQGQNVYPADQLMIIYQGKILKDDTTLDAN 269 + +KTL+ +F+I P+ +V +K IE+ +G++ +P +IY GKIL DD + Sbjct: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64 Query: 270 KVAENSFLVIML 305 + E +F+V+M+ Sbjct: 65 HIDEKNFVVVMV 76
>UBIL_NPVOP (Q05120) Ubiquitin-like protein precursor| Length = 93 Score = 47.8 bits (112), Expect = 3e-05 Identities = 28/74 (37%), Positives = 42/74 (56%) Frame = +3 Query: 84 MKLNVKTLKGTSFEIEATPESSVGEVKRIIESAQGQNVYPADQLMIIYQGKILKDDTTLD 263 M++ VKTL G + +E P +VG+VK+ I +G P DQ +IY GK L+D TL Sbjct: 1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEG---VPVDQQRLIYAGKQLEDAQTLA 57 Query: 264 ANKVAENSFLVIML 305 + + S L ++L Sbjct: 58 DYNIQKESTLHMVL 71
>DSK2_YEAST (P48510) Ubiquitin domain-containing protein DSK2| Length = 373 Score = 42.0 bits (97), Expect = 0.002 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = +3 Query: 84 MKLNVKTLKGTS-FEIEATPESSVGEVKRIIESAQGQNVYPADQLMIIYQGKILKDDTTL 260 M LN+ G +E+ PES+V + K I A G P +IY GKILKDD T+ Sbjct: 1 MSLNIHIKSGQDKWEVNVAPESTVLQFKEAINKANG---IPVANQRLIYSGKILKDDQTV 57 Query: 261 DANKVAE 281 ++ + + Sbjct: 58 ESYHIQD 64
>UBIQ_LEITA (P49635) Ubiquitin| Length = 76 Score = 42.0 bits (97), Expect = 0.002 Identities = 24/74 (32%), Positives = 40/74 (54%) Frame = +3 Query: 84 MKLNVKTLKGTSFEIEATPESSVGEVKRIIESAQGQNVYPADQLMIIYQGKILKDDTTLD 263 M++ VKTL GT+ +E P ++ VK I+ +G P DQ +I+ K L++ TL Sbjct: 1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFADKQLEEGRTLS 57 Query: 264 ANKVAENSFLVIML 305 + + S L ++L Sbjct: 58 DYNIQKESTLHLVL 71
>RHP23_SCHPO (O74803) UV excision repair protein rhp23 (RAD23 homolog)| Length = 368 Score = 41.6 bits (96), Expect = 0.002 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Frame = +3 Query: 84 MKLNVKTLKGTSFEI-EATPESSVGEVKRIIESAQGQNVYPADQLMIIYQGKILKDDTTL 260 M L K L+ F I + + ++ + E+K E Q Q Y ++ +IY G+IL DD T+ Sbjct: 1 MNLTFKNLQQQKFVISDVSADTKISELK---EKIQTQQNYEVERQKLIYSGRILADDKTV 57 Query: 261 DANKVAENSFLVIML 305 + E F+V M+ Sbjct: 58 GEYNIKEQDFIVCMV 72
>UBQL1_RAT (Q9JJP9) Ubiquilin-1 (Protein linking IAP with cytoskeleton 1)| (PLIC-1) Length = 582 Score = 34.7 bits (78), Expect = 0.25 Identities = 24/64 (37%), Positives = 33/64 (51%) Frame = +3 Query: 84 MKLNVKTLKGTSFEIEATPESSVGEVKRIIESAQGQNVYPADQLMIIYQGKILKDDTTLD 263 MK+ VKT K E SSV + K I ++ DQL++I+ GKILKD TL Sbjct: 28 MKVTVKTPKEKE-EFAVPENSSVQQFKEEISKRFKSHI---DQLVLIFAGKILKDQDTLS 83 Query: 264 ANKV 275 + + Sbjct: 84 QHGI 87
>UBQL1_MOUSE (Q8R317) Ubiquilin-1 (Protein linking IAP with cytoskeleton 1)| (PLIC-1) Length = 582 Score = 34.7 bits (78), Expect = 0.25 Identities = 24/64 (37%), Positives = 33/64 (51%) Frame = +3 Query: 84 MKLNVKTLKGTSFEIEATPESSVGEVKRIIESAQGQNVYPADQLMIIYQGKILKDDTTLD 263 MK+ VKT K E SSV + K I ++ DQL++I+ GKILKD TL Sbjct: 28 MKVTVKTPKEKE-EFAVPENSSVQQFKEEISKRFKSHI---DQLVLIFAGKILKDQDTLS 83 Query: 264 ANKV 275 + + Sbjct: 84 QHGI 87
>UBQL1_HUMAN (Q9UMX0) Ubiquilin-1 (Protein linking IAP with cytoskeleton 1)| (PLIC-1) (hPLIC-1) Length = 589 Score = 34.7 bits (78), Expect = 0.25 Identities = 25/64 (39%), Positives = 35/64 (54%) Frame = +3 Query: 84 MKLNVKTLKGTSFEIEATPESSVGEVKRIIESAQGQNVYPADQLMIIYQGKILKDDTTLD 263 MK+ VKT K E A PE+S V++ E + DQL++I+ GKILKD TL Sbjct: 37 MKVTVKTPKEK--EEFAVPENS--SVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLS 92 Query: 264 ANKV 275 + + Sbjct: 93 QHGI 96
>UBQL2_HUMAN (Q9UHD9) Ubiquilin-2 (Protein linking IAP with cytoskeleton 2)| (PLIC-2) (hPLIC-2) (Ubiquitin-like product Chap1/Dsk2) (DSK2 homolog) (Chap1) Length = 624 Score = 33.5 bits (75), Expect = 0.56 Identities = 24/59 (40%), Positives = 34/59 (57%) Frame = +3 Query: 84 MKLNVKTLKGTSFEIEATPESSVGEVKRIIESAQGQNVYPADQLMIIYQGKILKDDTTL 260 +K+ VKT K E A PE+S V++ E+ + DQL++I+ GKILKD TL Sbjct: 33 IKVTVKTPKEK--EEFAVPENS--SVQQFKEAISKRFKSQTDQLVLIFAGKILKDQDTL 87
>UBQL2_MOUSE (Q9QZM0) Ubiquilin-2 (Protein linking IAP with cytoskeleton 2)| (PLIC-2) (Ubiquitin-like product Chap1/Dsk2) (DSK2 homolog) (Chap1) Length = 638 Score = 33.5 bits (75), Expect = 0.56 Identities = 24/59 (40%), Positives = 34/59 (57%) Frame = +3 Query: 84 MKLNVKTLKGTSFEIEATPESSVGEVKRIIESAQGQNVYPADQLMIIYQGKILKDDTTL 260 +K+ VKT K E A PE+S V++ E+ + DQL++I+ GKILKD TL Sbjct: 33 IKVTVKTPKEK--EEFAVPENST--VQQFKEAISKRFKSQTDQLVLIFAGKILKDQDTL 87
>UBQL4_MOUSE (Q99NB8) Ubiquilin-4 (Ataxin-1 ubiquitin-like-interacting protein| A1U) Length = 596 Score = 32.7 bits (73), Expect = 0.95 Identities = 23/67 (34%), Positives = 36/67 (53%) Frame = +3 Query: 81 EMKLNVKTLKGTSFEIEATPESSVGEVKRIIESAQGQNVYPADQLMIIYQGKILKDDTTL 260 ++++ VKT K EI ++SV E K E + DQL++I+ GKILKD TL Sbjct: 12 QIRVTVKTPKDKE-EIVICDQASVKEFK---EEISRRFKAQQDQLVLIFAGKILKDGDTL 67 Query: 261 DANKVAE 281 + + + Sbjct: 68 SQHGIKD 74
>CG021_MOUSE (Q9JMG3) Protein C7orf21 homolog| Length = 245 Score = 32.3 bits (72), Expect = 1.2 Identities = 19/55 (34%), Positives = 29/55 (52%) Frame = +3 Query: 90 LNVKTLKGTSFEIEATPESSVGEVKRIIESAQGQNVYPADQLMIIYQGKILKDDT 254 L +K L + A P+ ++G +KR Q Q Q+ +IYQG++L DDT Sbjct: 104 LRLKFLNDSEQVARAWPQDTIGSLKRTQFPGQEQ------QVRLIYQGQLLGDDT 152
>UBQL4_HUMAN (Q9NRR5) Ubiquilin-4 (Ataxin-1 ubiquitin-like-interacting protein| A1U) Length = 601 Score = 31.6 bits (70), Expect = 2.1 Identities = 23/66 (34%), Positives = 35/66 (53%) Frame = +3 Query: 84 MKLNVKTLKGTSFEIEATPESSVGEVKRIIESAQGQNVYPADQLMIIYQGKILKDDTTLD 263 +++ VKT K EI +SV E K E + DQL++I+ GKILKD TL+ Sbjct: 13 IRVTVKTPKDKE-EIVICDRASVKEFK---EEISRRFKAQQDQLVLIFAGKILKDGDTLN 68 Query: 264 ANKVAE 281 + + + Sbjct: 69 QHGIKD 74
>PG46_MYCTU (P0A690) Hypothetical PE-PGRS family protein PE_PGRS46| Length = 778 Score = 31.6 bits (70), Expect = 2.1 Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 3/31 (9%) Frame = -2 Query: 514 AAGVSET---AEGCALGGAGSDAATGACEGG 431 A G+ ET A G A GG G D ATG +GG Sbjct: 460 AGGIGETDGSAGGVATGGEGGDGATGGVDGG 490
>PG46_MYCBO (P0A691) Hypothetical PE-PGRS family protein PE_PGRS46| Length = 778 Score = 31.6 bits (70), Expect = 2.1 Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 3/31 (9%) Frame = -2 Query: 514 AAGVSET---AEGCALGGAGSDAATGACEGG 431 A G+ ET A G A GG G D ATG +GG Sbjct: 460 AGGIGETDGSAGGVATGGEGGDGATGGVDGG 490
>UBQL3_HUMAN (Q9H347) Ubiquilin-3| Length = 655 Score = 30.8 bits (68), Expect = 3.6 Identities = 21/59 (35%), Positives = 34/59 (57%) Frame = +3 Query: 84 MKLNVKTLKGTSFEIEATPESSVGEVKRIIESAQGQNVYPADQLMIIYQGKILKDDTTL 260 +K+ VKT K + T ++ ++K E +Q +P DQL++I+ GKILKD +L Sbjct: 22 IKVTVKTPKDKE-DFSVTDTCTIQQLKE--EISQRFKAHP-DQLVLIFAGKILKDPDSL 76
>WDR22_HUMAN (Q96JK2) WD-repeat protein 22 (Breakpoint cluster region protein 2)| (BCRP2) Length = 942 Score = 30.8 bits (68), Expect = 3.6 Identities = 24/95 (25%), Positives = 44/95 (46%) Frame = -2 Query: 307 DSIITRKLFSATLLASRVVSSLRIFP*YMIIS*SAGYTFCP*ALSMILLTSPTEDSGVAS 128 DS++ R++ + + +S I + +S +GYT + S+ PT D + Sbjct: 420 DSLVRREIEGWSSDSDSDLSESTILQLHAGVSERSGYTDSESSASLPRSPPPTVDESADN 479 Query: 127 ISKLVPLRVFTLSFISASLPTHSLDSRGYPYLRLS 23 L PLRV T + ++++ PT + + RLS Sbjct: 480 AFHLGPLRVTTTNTVASTPPTPTCEDAASRQQRLS 514
>CG021_HUMAN (Q9BVT8) Protein C7orf21 (SB144)| Length = 246 Score = 30.0 bits (66), Expect = 6.2 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = +3 Query: 90 LNVKTLKGTSFEIEATPESSVGEVKRIIESAQGQNVYPADQLMIIYQGKILKDDT 254 L +K L + A P ++G +KR + Q Q+ +IYQG++L DDT Sbjct: 105 LRLKFLNDSEQVARAWPHDTIGSLKRTQFPGREQ------QVRLIYQGQLLGDDT 153
>SHOX2_MOUSE (P70390) Short stature homeobox protein 2 (Homeobox protein Og12X)| (OG-12) (Paired family homeodomain protein Prx3) Length = 331 Score = 30.0 bits (66), Expect = 6.2 Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 4/58 (6%) Frame = -2 Query: 592 VLECRQRQGLMQPDCIHQASPD----AVTAAAGVSETAEGCALGGAGSDAATGACEGG 431 VLE +G +P C+ D AV AA G G GG G A G GG Sbjct: 28 VLESGPLRGAKEPGCVEPGRDDRSSPAVRAAGGGGGAGGGGGGGGGGGGGAGGGGAGG 85
>WNT9A_CHICK (O42280) Protein Wnt-9a precursor (Wnt-14)| Length = 354 Score = 29.6 bits (65), Expect = 8.0 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Frame = -2 Query: 634 PGATTPCQEFVGLSVLECRQRQGLMQPDCIHQASPDAVTAAAGVSETAEGCALGGAG-SD 458 PG E + +S LEC+ + + +C + A G ETA A+ AG + Sbjct: 68 PGGAETLMEAISMSALECQYQFRFERWNCTLEGRYRASLLKRGFKETAFLYAISSAGLTH 127 Query: 457 AATGACEGG 431 A AC G Sbjct: 128 AMAKACSAG 136
>MPPA_SCHPO (O94745) Probable mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 494 Score = 29.6 bits (65), Expect = 8.0 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = +3 Query: 129 EATPESSVGEVKRIIESAQGQNVYPADQLMIIYQGKILKDDTTLDANKVAE 281 +AT + VGE+K +E+ G + + +IYQ + DD + +AE Sbjct: 97 QATERTPVGEMKAKLENLGGNYMCSTSRESMIYQAAVFNDDVKSMSKLLAE 147 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,931,825 Number of Sequences: 219361 Number of extensions: 1148975 Number of successful extensions: 3887 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 3636 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3871 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6086476506 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
