ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd27f18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK073271.1| Oryza sativa (japonica cultivar-group) cDNA clon... 291 1e-75
2dbj|AK061556.1| Oryza sativa (japonica cultivar-group) cDNA clon... 291 1e-75
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 180 4e-42
4dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic D... 180 4e-42
5dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic D... 180 4e-42
6gb|AY108395.1| Zea mays PCO142081 mRNA sequence 139 1e-29
7gb|AY103604.1| Zea mays PCO142082 mRNA sequence 133 8e-28
8gb|AC099341.4| Homo sapiens BAC clone RP11-317C13 from 7, comple... 44 0.57
9emb|X89997.1|PSMVGENOM Pea seed-borne mosaic virus complete genome 44 0.57
10dbj|AB073646.1| Homo sapiens primary neuroblastoma cDNA, clone:N... 44 0.57
11dbj|AP003116.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 44 0.57
12dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
13gb|AF185287.1|AF185287 Drosophila melanogaster XCAP-C/SMC4 homol... 42 2.2
14dbj|AP005722.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
15dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
16dbj|AK103728.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
17dbj|AK103130.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
18gb|AF186472.1|AF186472 Drosophila melanogaster condensin subunit... 42 2.2
19gb|AY108301.1| Zea mays PCO104381 mRNA sequence 42 2.2
20gb|U63530.1|OSU63530 Oryza sativa osRAD23 mRNA, complete cds 42 2.2
21ref|NM_123208.1| Arabidopsis thaliana damaged DNA binding AT5G38... 40 8.8
22ref|XM_365267.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 8.8
23gb|AC006353.3| Homo sapiens PAC clone RP5-1062J16 from 7, comple... 40 8.8
24gb|AC066590.5| Homo sapiens chromosome 3 clone RP11-324K11 map 3... 40 8.8
25gb|AY678272.1| Human adenovirus type 26 E1A 13S protein (E1A) ge... 40 8.8
26emb|AJ854486.1| Human adenovirus type 9 complete genome 40 8.8
27emb|BX569794.8| Zebrafish DNA sequence from clone DKEYP-15B2 in ... 40 8.8
28gb|AY081835.1| Arabidopsis thaliana At5g38470/At5g38470 mRNA, co... 40 8.8
29gb|AY058196.1| Arabidopsis thaliana unknown protein mRNA, comple... 40 8.8
30gb|AC091932.2| Homo sapiens chromosome 5 clone RP11-315A16, comp... 40 8.8
31gb|AY037181.1| Arabidopsis thaliana unknown protein mRNA, comple... 40 8.8
32dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
33gb|AY087564.1| Arabidopsis thaliana clone 36697 mRNA, complete s... 40 8.8
34dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
35emb|BX088727.14| Zebrafish DNA sequence from clone DKEY-218A22 i... 40 8.8
36dbj|AB109199.1| Arabidopsis thaliana AtRAD23-4beta mRNA for RAD2... 40 8.8
37dbj|AB109198.1| Arabidopsis thaliana AtRAD23-4alpha mRNA for RAD... 40 8.8
38dbj|AB005248.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.8
39gb|AC002122.1|AC002122 Human unknown clone GS1-293J4 from 5p15.2... 40 8.8
40dbj|AK069065.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.8
41emb|AL808112.34| Mouse DNA sequence from clone RP23-57N22 on chr... 40 8.8
42emb|AL844485.7| Mouse DNA sequence from clone RP23-436D21 on chr... 40 8.8
43gb|AC087857.3| Homo sapiens chromosome 3 clone RP11-149E15 map 3... 40 8.8 
>dbj|AK073271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029B07, full
           insert sequence
          Length = 1629

 Score =  291 bits (147), Expect = 1e-75
 Identities = 270/311 (86%)
 Strand = Plus / Plus

                                                                       
Query: 78  gccgagatgaagctcaacgtgaagaccctcaagggcacaagcttcgagatcgaggcgacc 137
           ||||| ||||||||   |||||||||||| |||||||| | ||||||||||||||||| |
Sbjct: 144 gccgacatgaagctgttcgtgaagaccctgaagggcaccaacttcgagatcgaggcgagc 203

                                                                       
Query: 138 cccgagtcctcggtgggtgaggtcaagagaatcatcgagagtgctcaggggcagaatgtg 197
           |||||| | ||||||| |||||| ||||||||||| |||||| |||||||||||||||||
Sbjct: 204 cccgaggcgtcggtggctgaggtgaagagaatcattgagagtactcaggggcagaatgtg 263

                                                                       
Query: 198 taccctgcggatcagctgatgatcatatatcaaggaaaaattctcaaggatgataccact 257
           ||||| |||||||||| |||| ||||| | ||||| |||||||||||||||||||| |||
Sbjct: 264 tacccggcggatcagcagatgctcatacaccaagggaaaattctcaaggatgatacaact 323

                                                                       
Query: 258 ctggatgctaacaaggttgcagagaacagtttccttgttataatgctgtctaagcctaag 317
            |||| |  ||||| ||||| |||||||| |||||||||||||||||||||||| | || 
Sbjct: 324 ttggaaggcaacaaagttgctgagaacagcttccttgttataatgctgtctaaggccaaa 383

                                                                       
Query: 318 gcgtcatctagtggcgcttcttctgcttcaaaggcacctgttagtcagtctcaacctgct 377
           || ||||| ||||| |||||  ||||||||||||||||||| || ||||||||||| || 
Sbjct: 384 gcatcatcaagtggagcttcaactgcttcaaaggcacctgtgagccagtctcaaccagca 443

                      
Query: 378 accccagttgc 388
           || ||||||||
Sbjct: 444 actccagttgc 454



 Score =  127 bits (64), Expect = 5e-26
 Identities = 126/144 (87%), Gaps = 2/144 (1%)
 Strand = Plus / Plus

                                                                       
Query: 504 actccagctgctgcagtaactgcatcaggcgatgcttgatgtatacagtcaggctgcatc 563
           |||||||||||||| || || |||||| | |||||  ||||| |||||||||||||||||
Sbjct: 561 actccagctgctgctgtgaccgcatcaagtgatgcg-gatgtctacagtcaggctgcatc 619

                                                                       
Query: 564 aaaccttgtctctggcggcattctagaacagacagtccaacaaattcttgacatggggtg 623
           ||| ||||| || ||  |||  |||||||||||| ||||||||||||||||||| |||||
Sbjct: 620 aaatcttgtttcaggtagcaacctagaacagacaatccaacaaattcttgacat-gggtg 678

                                   
Query: 624 gtggcacctgggaacgtgatatgg 647
           ||||||||||||||||||| ||||
Sbjct: 679 gtggcacctgggaacgtgacatgg 702



 Score =  109 bits (55), Expect = 1e-20
 Identities = 94/107 (87%)
 Strand = Plus / Plus

                                                                       
Query: 411 gttgcctcagctgcaagatcaccaccttcacaagcacctgttgctgcatctgaaccggcg 470
           |||||||||| ||||||| |||||||| ||||||||||||||| | || |||||||||| 
Sbjct: 450 gttgcctcagttgcaagaacaccacctccacaagcacctgttgttacacctgaaccggca 509

                                                          
Query: 471 cctcccagtgcacagccttcagctgtttctgatactccagctgctgc 517
           ||||| |||||||||||| ||| || |||||  ||||||||||||||
Sbjct: 510 cctccaagtgcacagcctccagttgcttctgccactccagctgctgc 556
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>dbj|AK061556.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-C08, full
           insert sequence
          Length = 1567

 Score =  291 bits (147), Expect = 1e-75
 Identities = 270/311 (86%)
 Strand = Plus / Plus

                                                                       
Query: 78  gccgagatgaagctcaacgtgaagaccctcaagggcacaagcttcgagatcgaggcgacc 137
           ||||| ||||||||   |||||||||||| |||||||| | ||||||||||||||||| |
Sbjct: 109 gccgacatgaagctgttcgtgaagaccctgaagggcaccaacttcgagatcgaggcgagc 168

                                                                       
Query: 138 cccgagtcctcggtgggtgaggtcaagagaatcatcgagagtgctcaggggcagaatgtg 197
           |||||| | ||||||| |||||| ||||||||||| |||||| |||||||||||||||||
Sbjct: 169 cccgaggcgtcggtggctgaggtgaagagaatcattgagagtactcaggggcagaatgtg 228

                                                                       
Query: 198 taccctgcggatcagctgatgatcatatatcaaggaaaaattctcaaggatgataccact 257
           ||||| |||||||||| |||| ||||| | ||||| |||||||||||||||||||| |||
Sbjct: 229 tacccggcggatcagcagatgctcatacaccaagggaaaattctcaaggatgatacaact 288

                                                                       
Query: 258 ctggatgctaacaaggttgcagagaacagtttccttgttataatgctgtctaagcctaag 317
            |||| |  ||||| ||||| |||||||| |||||||||||||||||||||||| | || 
Sbjct: 289 ttggaaggcaacaaagttgctgagaacagcttccttgttataatgctgtctaaggccaaa 348

                                                                       
Query: 318 gcgtcatctagtggcgcttcttctgcttcaaaggcacctgttagtcagtctcaacctgct 377
           || ||||| ||||| |||||  ||||||||||||||||||| || ||||||||||| || 
Sbjct: 349 gcatcatcaagtggagcttcaactgcttcaaaggcacctgtgagccagtctcaaccagca 408

                      
Query: 378 accccagttgc 388
           || ||||||||
Sbjct: 409 actccagttgc 419



 Score =  127 bits (64), Expect = 5e-26
 Identities = 126/144 (87%), Gaps = 2/144 (1%)
 Strand = Plus / Plus

                                                                       
Query: 504 actccagctgctgcagtaactgcatcaggcgatgcttgatgtatacagtcaggctgcatc 563
           |||||||||||||| || || |||||| | |||||  ||||| |||||||||||||||||
Sbjct: 526 actccagctgctgctgtgaccgcatcaagtgatgcg-gatgtctacagtcaggctgcatc 584

                                                                       
Query: 564 aaaccttgtctctggcggcattctagaacagacagtccaacaaattcttgacatggggtg 623
           ||| ||||| || ||  |||  |||||||||||| ||||||||||||||||||| |||||
Sbjct: 585 aaatcttgtttcaggtagcaacctagaacagacaatccaacaaattcttgacat-gggtg 643

                                   
Query: 624 gtggcacctgggaacgtgatatgg 647
           ||||||||||||||||||| ||||
Sbjct: 644 gtggcacctgggaacgtgacatgg 667



 Score =  109 bits (55), Expect = 1e-20
 Identities = 94/107 (87%)
 Strand = Plus / Plus

                                                                       
Query: 411 gttgcctcagctgcaagatcaccaccttcacaagcacctgttgctgcatctgaaccggcg 470
           |||||||||| ||||||| |||||||| ||||||||||||||| | || |||||||||| 
Sbjct: 415 gttgcctcagttgcaagaacaccacctccacaagcacctgttgttacacctgaaccggca 474

                                                          
Query: 471 cctcccagtgcacagccttcagctgtttctgatactccagctgctgc 517
           ||||| |||||||||||| ||| || |||||  ||||||||||||||
Sbjct: 475 cctccaagtgcacagcctccagttgcttctgccactccagctgctgc 521
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  180 bits (91), Expect = 4e-42
 Identities = 145/163 (88%)
 Strand = Plus / Plus

                                                                           
Query: 149     ggtgggtgaggtcaagagaatcatcgagagtgctcaggggcagaatgtgtaccctgcgga 208
               ||||| |||||| ||||||||||| |||||| |||||||||||||||||||||| |||||
Sbjct: 8732119 ggtggctgaggtgaagagaatcattgagagtactcaggggcagaatgtgtacccggcgga 8732178

                                                                           
Query: 209     tcagctgatgatcatatatcaaggaaaaattctcaaggatgataccactctggatgctaa 268
               ||||| |||| ||||| | ||||| |||||||||||||||||||| ||| |||| |  ||
Sbjct: 8732179 tcagcagatgctcatacaccaagggaaaattctcaaggatgatacaactttggaaggcaa 8732238

                                                          
Query: 269     caaggttgcagagaacagtttccttgttataatgctgtctaag 311
               ||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 8732239 caaagttgctgagaacagcttccttgttataatgctgtctaag 8732281



 Score =  117 bits (59), Expect = 5e-23
 Identities = 96/107 (89%), Gaps = 1/107 (0%)
 Strand = Plus / Plus

                                                                           
Query: 541     gatgtatacagtcaggctgcatcaaaccttgtctctggcggcattctagaacagacagtc 600
               ||||| |||||||||||||||||||| ||||| || ||  |||  |||||||||||| ||
Sbjct: 8734912 gatgtctacagtcaggctgcatcaaatcttgtttcaggtagcaacctagaacagacaatc 8734971

                                                              
Query: 601     caacaaattcttgacatggggtggtggcacctgggaacgtgatatgg 647
               ||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 8734972 caacaaattcttgacat-gggtggtggcacctgggaacgtgacatgg 8735017



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                           
Query: 78      gccgagatgaagctcaacgtgaagaccctcaagggcacaagcttcgagatcgaggcgacc 137
               ||||| ||||||||   |||||||||||| |||||||| | ||||||||||||||||| |
Sbjct: 8731561 gccgacatgaagctgttcgtgaagaccctgaagggcaccaacttcgagatcgaggcgagc 8731620

                     
Query: 138     cccgag 143
               ||||||
Sbjct: 8731621 cccgag 8731626



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                        
Query: 411     gttgcctcagctgcaagatcaccaccttcacaagcacctgttgctgcatctgaaccg 467
               |||||||||| ||||||| |||||||| ||||||||||||||| | || ||||||||
Sbjct: 8733575 gttgcctcagttgcaagaacaccacctccacaagcacctgttgttacacctgaaccg 8733631



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                              
Query: 471     cctcccagtgcacagccttcagctgtttctgatactccagctgctgc 517
               ||||| |||||||||||| ||| || |||||  ||||||||||||||
Sbjct: 8733710 cctccaagtgcacagcctccagttgcttctgccactccagctgctgc 8733756



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                     
Query: 321     tcatctagtggcgcttcttctgcttcaaaggcacctgt 358
               ||||| ||||| |||||  |||||||||||||||||||
Sbjct: 8733037 tcatcaagtggagcttcaactgcttcaaaggcacctgt 8733074
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>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OJ1001_B06
          Length = 134810

 Score =  180 bits (91), Expect = 4e-42
 Identities = 145/163 (88%)
 Strand = Plus / Plus

                                                                        
Query: 149  ggtgggtgaggtcaagagaatcatcgagagtgctcaggggcagaatgtgtaccctgcgga 208
            ||||| |||||| ||||||||||| |||||| |||||||||||||||||||||| |||||
Sbjct: 2440 ggtggctgaggtgaagagaatcattgagagtactcaggggcagaatgtgtacccggcgga 2499

                                                                        
Query: 209  tcagctgatgatcatatatcaaggaaaaattctcaaggatgataccactctggatgctaa 268
            ||||| |||| ||||| | ||||| |||||||||||||||||||| ||| |||| |  ||
Sbjct: 2500 tcagcagatgctcatacaccaagggaaaattctcaaggatgatacaactttggaaggcaa 2559

                                                       
Query: 269  caaggttgcagagaacagtttccttgttataatgctgtctaag 311
            ||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 2560 caaagttgctgagaacagcttccttgttataatgctgtctaag 2602



 Score =  117 bits (59), Expect = 5e-23
 Identities = 96/107 (89%), Gaps = 1/107 (0%)
 Strand = Plus / Plus

                                                                        
Query: 541  gatgtatacagtcaggctgcatcaaaccttgtctctggcggcattctagaacagacagtc 600
            ||||| |||||||||||||||||||| ||||| || ||  |||  |||||||||||| ||
Sbjct: 5233 gatgtctacagtcaggctgcatcaaatcttgtttcaggtagcaacctagaacagacaatc 5292

                                                           
Query: 601  caacaaattcttgacatggggtggtggcacctgggaacgtgatatgg 647
            ||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 5293 caacaaattcttgacat-gggtggtggcacctgggaacgtgacatgg 5338



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                        
Query: 78   gccgagatgaagctcaacgtgaagaccctcaagggcacaagcttcgagatcgaggcgacc 137
            ||||| ||||||||   |||||||||||| |||||||| | ||||||||||||||||| |
Sbjct: 1882 gccgacatgaagctgttcgtgaagaccctgaagggcaccaacttcgagatcgaggcgagc 1941

                  
Query: 138  cccgag 143
            ||||||
Sbjct: 1942 cccgag 1947



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                     
Query: 411  gttgcctcagctgcaagatcaccaccttcacaagcacctgttgctgcatctgaaccg 467
            |||||||||| ||||||| |||||||| ||||||||||||||| | || ||||||||
Sbjct: 3896 gttgcctcagttgcaagaacaccacctccacaagcacctgttgttacacctgaaccg 3952



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 471  cctcccagtgcacagccttcagctgtttctgatactccagctgctgc 517
            ||||| |||||||||||| ||| || |||||  ||||||||||||||
Sbjct: 4031 cctccaagtgcacagcctccagttgcttctgccactccagctgctgc 4077



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 321  tcatctagtggcgcttcttctgcttcaaaggcacctgt 358
            ||||| ||||| |||||  |||||||||||||||||||
Sbjct: 3358 tcatcaagtggagcttcaactgcttcaaaggcacctgt 3395
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>dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0037N01
          Length = 174085

 Score =  180 bits (91), Expect = 4e-42
 Identities = 145/163 (88%)
 Strand = Plus / Plus

                                                                          
Query: 149    ggtgggtgaggtcaagagaatcatcgagagtgctcaggggcagaatgtgtaccctgcgga 208
              ||||| |||||| ||||||||||| |||||| |||||||||||||||||||||| |||||
Sbjct: 147101 ggtggctgaggtgaagagaatcattgagagtactcaggggcagaatgtgtacccggcgga 147160

                                                                          
Query: 209    tcagctgatgatcatatatcaaggaaaaattctcaaggatgataccactctggatgctaa 268
              ||||| |||| ||||| | ||||| |||||||||||||||||||| ||| |||| |  ||
Sbjct: 147161 tcagcagatgctcatacaccaagggaaaattctcaaggatgatacaactttggaaggcaa 147220

                                                         
Query: 269    caaggttgcagagaacagtttccttgttataatgctgtctaag 311
              ||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 147221 caaagttgctgagaacagcttccttgttataatgctgtctaag 147263



 Score =  117 bits (59), Expect = 5e-23
 Identities = 96/107 (89%), Gaps = 1/107 (0%)
 Strand = Plus / Plus

                                                                          
Query: 541    gatgtatacagtcaggctgcatcaaaccttgtctctggcggcattctagaacagacagtc 600
              ||||| |||||||||||||||||||| ||||| || ||  |||  |||||||||||| ||
Sbjct: 149894 gatgtctacagtcaggctgcatcaaatcttgtttcaggtagcaacctagaacagacaatc 149953

                                                             
Query: 601    caacaaattcttgacatggggtggtggcacctgggaacgtgatatgg 647
              ||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 149954 caacaaattcttgacat-gggtggtggcacctgggaacgtgacatgg 149999



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                          
Query: 78     gccgagatgaagctcaacgtgaagaccctcaagggcacaagcttcgagatcgaggcgacc 137
              ||||| ||||||||   |||||||||||| |||||||| | ||||||||||||||||| |
Sbjct: 146543 gccgacatgaagctgttcgtgaagaccctgaagggcaccaacttcgagatcgaggcgagc 146602

                    
Query: 138    cccgag 143
              ||||||
Sbjct: 146603 cccgag 146608



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                       
Query: 411    gttgcctcagctgcaagatcaccaccttcacaagcacctgttgctgcatctgaaccg 467
              |||||||||| ||||||| |||||||| ||||||||||||||| | || ||||||||
Sbjct: 148557 gttgcctcagttgcaagaacaccacctccacaagcacctgttgttacacctgaaccg 148613



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                             
Query: 471    cctcccagtgcacagccttcagctgtttctgatactccagctgctgc 517
              ||||| |||||||||||| ||| || |||||  ||||||||||||||
Sbjct: 148692 cctccaagtgcacagcctccagttgcttctgccactccagctgctgc 148738



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                    
Query: 321    tcatctagtggcgcttcttctgcttcaaaggcacctgt 358
              ||||| ||||| |||||  |||||||||||||||||||
Sbjct: 148019 tcatcaagtggagcttcaactgcttcaaaggcacctgt 148056
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>gb|AY108395.1| Zea mays PCO142081 mRNA sequence
          Length = 1776

 Score =  139 bits (70), Expect = 1e-29
 Identities = 208/254 (81%)
 Strand = Plus / Plus

                                                                       
Query: 84  atgaagctcaacgtgaagaccctcaagggcacaagcttcgagatcgaggcgacccccgag 143
           |||||||| ||||| ||||||||||||||||| | ||||||||||||||||| |||||| 
Sbjct: 157 atgaagcttaacgtcaagaccctcaagggcaccaacttcgagatcgaggcgagccccgat 216

                                                                       
Query: 144 tcctcggtgggtgaggtcaagagaatcatcgagagtgctcaggggcagaatgtgtaccct 203
            | ||||| | |||||| ||||| |||||||| | | ||||||| |||| |   ||||| 
Sbjct: 217 gcgtcggttgctgaggtgaagaggatcatcgaaactactcagggtcagagtacctaccca 276

                                                                       
Query: 204 gcggatcagctgatgatcatatatcaaggaaaaattctcaaggatgataccactctggat 263
           || || ||||  ||| ||||||| ||||| |||||||| |||||||| |||||| |||| 
Sbjct: 277 gcagaccagcaaatgctcatataccaagggaaaattctgaaggatgagaccactttggaa 336

                                                                       
Query: 264 gctaacaaggttgcagagaacagtttccttgttataatgctgtctaagcctaaggcgtca 323
              |||   ||||| |||||||| |||||||||||||||||||| ||| ||||||| || 
Sbjct: 337 agcaacggagttgctgagaacagcttccttgttataatgctgtccaaggctaaggcatcg 396

                         
Query: 324 tctagtggcgcttc 337
           || ||||| |||||
Sbjct: 397 tcaagtggagcttc 410



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 85/102 (83%), Gaps = 1/102 (0%)
 Strand = Plus / Plus

                                                                       
Query: 540 tgatgtatacagtcaggctgcatcaaaccttgtctctggcggcattctagaacagacagt 599
           |||||| ||||||||||| || || |||||||| || |||  ||  |||||||||||  |
Sbjct: 579 tgatgtgtacagtcaggcagcttcgaaccttgtatcaggcaacaacctagaacagactat 638

                                                     
Query: 600 ccaacaaattcttgacatggggtggtggcacctgggaacgtg 641
            ||||||||||||||||| ||||||||| || ||||| ||||
Sbjct: 639 tcaacaaattcttgacat-gggtggtggtacttgggagcgtg 679
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>gb|AY103604.1| Zea mays PCO142082 mRNA sequence
          Length = 1672

 Score =  133 bits (67), Expect = 8e-28
 Identities = 211/259 (81%)
 Strand = Plus / Plus

                                                                       
Query: 80  cgagatgaagctcaacgtgaagaccctcaagggcacaagcttcgagatcgaggcgacccc 139
           |||||||||||| ||||| ||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 126 cgagatgaagcttaacgtcaagaccctcaagggcaccaacttcgagatcgaggcgagccc 185

                                                                       
Query: 140 cgagtcctcggtgggtgaggtcaagagaatcatcgagagtgctcaggggcagaatgtgta 199
           |||  | ||||| | ||| || ||||| ||||| ||||   |||| || |||| |   ||
Sbjct: 186 cgatgcatcggttgctgatgtgaagaggatcattgagaccactcaaggtcagagtaccta 245

                                                                       
Query: 200 ccctgcggatcagctgatgatcatatatcaaggaaaaattctcaaggatgataccactct 259
           ||  ||||| ||||  ||| ||||||| ||||| ||||||||||||||||| |||||| |
Sbjct: 246 ccgggcggaccagcaaatgctcatataccaagggaaaattctcaaggatgaaaccacttt 305

                                                                       
Query: 260 ggatgctaacaaggttgcagagaacagtttccttgttataatgctgtctaagcctaaggc 319
           |||    |||   ||||| |||||||| ||||||||||||||| |||| ||| |||||||
Sbjct: 306 ggaaagcaacggagttgctgagaacagcttccttgttataatgttgtccaaggctaaggc 365

                              
Query: 320 gtcatctagtggcgcttct 338
            ||||| ||||| ||||||
Sbjct: 366 atcatcgagtggagcttct 384



 Score =  105 bits (53), Expect = 2e-19
 Identities = 93/105 (88%), Gaps = 1/105 (0%)
 Strand = Plus / Plus

                                                                       
Query: 540 tgatgtatacagtcaggctgcatcaaaccttgtctctggcggcattctagaacagacagt 599
           |||||| ||||||||||| || ||||||||||| ||||||  || ||||||||||||  |
Sbjct: 561 tgatgtgtacagtcaggcagcttcaaaccttgtatctggcaacaatctagaacagactat 620

                                                        
Query: 600 ccaacaaattcttgacatggggtggtggcacctgggaacgtgata 644
           |||||||||||||||||| ||||||||| || |||||||||||||
Sbjct: 621 ccaacaaattcttgacat-gggtggtggtacatgggaacgtgata 664
to top
>gb|AC099341.4| Homo sapiens BAC clone RP11-317C13 from 7, complete sequence
          Length = 51939

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 504   actccagctgctgcagtaactgcatc 529
             |||||||||||||| |||||||||||
Sbjct: 16923 actccagctgctgctgtaactgcatc 16948
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>emb|X89997.1|PSMVGENOM Pea seed-borne mosaic virus complete genome
          Length = 9860

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 225  tatcaaggaaaaattctcaagg 246
            ||||||||||||||||||||||
Sbjct: 4462 tatcaaggaaaaattctcaagg 4483
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>dbj|AB073646.1| Homo sapiens primary neuroblastoma cDNA, clone:Nbla00137, full
           insert sequence
          Length = 2862

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 504 actccagctgctgcagtaactgcatc 529
           |||||||||||||| |||||||||||
Sbjct: 329 actccagctgctgctgtaactgcatc 354
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>dbj|AP003116.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1241F12
          Length = 142424

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 262    atgctaacaaggttgcagagaa 283
              ||||||||||||||||||||||
Sbjct: 119308 atgctaacaaggttgcagagaa 119329
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                            
Query: 240      ctcaaggatgataccactctggatgctaacaaggttgcagagaacagtttccttgttata 299
                ||||||||||| |||||  ||||||  ||||| |||   || ||||| ||||||||||||
Sbjct: 14308934 ctcaaggatgacaccacattggatgaaaacaaagttcttgaaaacagcttccttgttata 14308993

                     
Query: 300      atgct 304
                |||||
Sbjct: 14308994 atgct 14308998
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>gb|AF185287.1|AF185287 Drosophila melanogaster XCAP-C/SMC4 homolog Gluon (glu) mRNA,
            complete cds
          Length = 4461

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 284  cagtttccttgttataatgct 304
            |||||||||||||||||||||
Sbjct: 3533 cagtttccttgttataatgct 3513
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>dbj|AP005722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1261_A08
          Length = 162113

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                          
Query: 240    ctcaaggatgataccactctggatgctaacaaggttgcagagaacagtttccttgttata 299
              ||||||||||| |||||  ||||||  ||||| |||   || ||||| ||||||||||||
Sbjct: 125479 ctcaaggatgacaccacattggatgaaaacaaagttcttgaaaacagcttccttgttata 125538

                   
Query: 300    atgct 304
              |||||
Sbjct: 125539 atgct 125543
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>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
           PAC clone:P0465E03
          Length = 151206

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 240 ctcaaggatgataccactctggatgctaacaaggttgcagagaacagtttccttgttata 299
           ||||||||||| |||||  ||||||  ||||| |||   || ||||| ||||||||||||
Sbjct: 737 ctcaaggatgacaccacattggatgaaaacaaagttcttgaaaacagcttccttgttata 796

                
Query: 300 atgct 304
           |||||
Sbjct: 797 atgct 801
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>dbj|AK103728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138E11, full
           insert sequence
          Length = 2031

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 240 ctcaaggatgataccactctggatgctaacaaggttgcagagaacagtttccttgttata 299
           ||||||||||| |||||  ||||||  ||||| |||   || ||||| ||||||||||||
Sbjct: 220 ctcaaggatgacaccacattggatgaaaacaaagttcttgaaaacagcttccttgttata 279

                
Query: 300 atgct 304
           |||||
Sbjct: 280 atgct 284
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>dbj|AK103130.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119P16, full
           insert sequence
          Length = 1513

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 240 ctcaaggatgataccactctggatgctaacaaggttgcagagaacagtttccttgttata 299
           ||||||||||| |||||  ||||||  ||||| |||   || ||||| ||||||||||||
Sbjct: 220 ctcaaggatgacaccacattggatgaaaacaaagttcttgaaaacagcttccttgttata 279

                
Query: 300 atgct 304
           |||||
Sbjct: 280 atgct 284
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>gb|AF186472.1|AF186472 Drosophila melanogaster condensin subunit SMC4 (glu) mRNA, complete
            cds
          Length = 4514

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 284  cagtttccttgttataatgct 304
            |||||||||||||||||||||
Sbjct: 3572 cagtttccttgttataatgct 3552
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>gb|AY108301.1| Zea mays PCO104381 mRNA sequence
          Length = 1521

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 78  gccgagatgaagctcaacgtgaagaccctcaagggcacaagcttcgagatcga 130
           |||||||||||| ||  ||||||||| ||||||||  | |||||| |||||||
Sbjct: 132 gccgagatgaaggtctccgtgaagacgctcaagggatctagcttccagatcga 184
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>gb|U63530.1|OSU63530 Oryza sativa osRAD23 mRNA, complete cds
          Length = 1533

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 240 ctcaaggatgataccactctggatgctaacaaggttgcagagaacagtttccttgttata 299
           ||||||||||| |||||  ||||||  ||||| |||   || ||||| ||||||||||||
Sbjct: 214 ctcaaggatgacaccacattggatgaaaacaaagttcttgaaaacagcttccttgttata 273

                
Query: 300 atgct 304
           |||||
Sbjct: 274 atgct 278
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>ref|NM_123208.1| Arabidopsis thaliana damaged DNA binding AT5G38470 mRNA, complete
           cds
          Length = 1426

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                       
Query: 228 caaggaaaaattctcaaggatgataccactctggatgctaacaaggttgcagagaacagt 287
           ||||||||  |||| |||||||| |||||  |||| |  ||||| ||||  |||||||||
Sbjct: 220 caaggaaaggttctaaaggatgagaccacattggaagagaacaatgttgttgagaacagt 279

                               
Query: 288 ttccttgttataatgctgtc 307
           ||| ||||||| ||| ||||
Sbjct: 280 ttcattgttatcatgttgtc 299
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>ref|XM_365267.1| Magnaporthe grisea 70-15 hypothetical protein (MG01969.4) partial
            mRNA
          Length = 6051

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 99   aagaccctcaagggcacaag 118
            ||||||||||||||||||||
Sbjct: 2914 aagaccctcaagggcacaag 2933
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>gb|AC006353.3| Homo sapiens PAC clone RP5-1062J16 from 7, complete sequence
          Length = 158090

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    agtgggttggaagggaagcc 80
             ||||||||||||||||||||
Sbjct: 73530 agtgggttggaagggaagcc 73549
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>gb|AC066590.5| Homo sapiens chromosome 3 clone RP11-324K11 map 3p, complete sequence
          Length = 185895

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 399   ccacctgtccctgttgcctc 418
             ||||||||||||||||||||
Sbjct: 94369 ccacctgtccctgttgcctc 94388
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>gb|AY678272.1| Human adenovirus type 26 E1A 13S protein (E1A) gene, complete cds
          Length = 1351

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 198 taccctgcggatcagctgat 217
           ||||||||||||||||||||
Sbjct: 83  taccctgcggatcagctgat 64
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>emb|AJ854486.1| Human adenovirus type 9 complete genome
          Length = 35083

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 198 taccctgcggatcagctgat 217
           ||||||||||||||||||||
Sbjct: 482 taccctgcggatcagctgat 463
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>emb|BX569794.8| Zebrafish DNA sequence from clone DKEYP-15B2 in linkage group 6,
            complete sequence
          Length = 162388

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 338  ttctgcttcaaaggcacctg 357
            ||||||||||||||||||||
Sbjct: 5204 ttctgcttcaaaggcacctg 5185
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>gb|AY081835.1| Arabidopsis thaliana At5g38470/At5g38470 mRNA, complete cds
          Length = 1137

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                       
Query: 228 caaggaaaaattctcaaggatgataccactctggatgctaacaaggttgcagagaacagt 287
           ||||||||  |||| |||||||| |||||  |||| |  ||||| ||||  |||||||||
Sbjct: 142 caaggaaaggttctaaaggatgagaccacattggaagagaacaatgttgttgagaacagt 201

                               
Query: 288 ttccttgttataatgctgtc 307
           ||| ||||||| ||| ||||
Sbjct: 202 ttcattgttatcatgttgtc 221
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>gb|AY058196.1| Arabidopsis thaliana unknown protein mRNA, complete cds
          Length = 1426

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                       
Query: 228 caaggaaaaattctcaaggatgataccactctggatgctaacaaggttgcagagaacagt 287
           ||||||||  |||| |||||||| |||||  |||| |  ||||| ||||  |||||||||
Sbjct: 220 caaggaaaggttctaaaggatgagaccacattggaagagaacaatgttgttgagaacagt 279

                               
Query: 288 ttccttgttataatgctgtc 307
           ||| ||||||| ||| ||||
Sbjct: 280 ttcattgttatcatgttgtc 299
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>gb|AC091932.2| Homo sapiens chromosome 5 clone RP11-315A16, complete sequence
          Length = 167799

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   tcatatatcaaggaaaaatt 239
             ||||||||||||||||||||
Sbjct: 74667 tcatatatcaaggaaaaatt 74648
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>gb|AY037181.1| Arabidopsis thaliana unknown protein mRNA, complete cds
          Length = 1378

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                       
Query: 228 caaggaaaaattctcaaggatgataccactctggatgctaacaaggttgcagagaacagt 287
           ||||||||  |||| |||||||| |||||  |||| |  ||||| ||||  |||||||||
Sbjct: 212 caaggaaaggttctaaaggatgagaccacattggaagagaacaatgttgttgagaacagt 271

                               
Query: 288 ttccttgttataatgctgtc 307
           ||| ||||||| ||| ||||
Sbjct: 272 ttcattgttatcatgttgtc 291
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 96      gtgaagaccctcaagggcac 115
               ||||||||||||||||||||
Sbjct: 4408241 gtgaagaccctcaagggcac 4408260
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>gb|AY087564.1| Arabidopsis thaliana clone 36697 mRNA, complete sequence
          Length = 1426

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                       
Query: 228 caaggaaaaattctcaaggatgataccactctggatgctaacaaggttgcagagaacagt 287
           ||||||||  |||| |||||||| |||||  |||| |  ||||| ||||  |||||||||
Sbjct: 220 caaggaaaggttctaaaggatgagaccacattggaagagaacaatgttgttgagaacagt 279

                               
Query: 288 ttccttgttataatgctgtc 307
           ||| ||||||| ||| ||||
Sbjct: 280 ttcattgttatcatgttgtc 299
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>dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0544B02
          Length = 156339

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    gtgaagaccctcaagggcac 115
             ||||||||||||||||||||
Sbjct: 91805 gtgaagaccctcaagggcac 91824
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>emb|BX088727.14| Zebrafish DNA sequence from clone DKEY-218A22 in linkage group 2,
             complete sequence
          Length = 185178

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   tttccttgttataatgctgt 306
             ||||||||||||||||||||
Sbjct: 12021 tttccttgttataatgctgt 12040
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>dbj|AB109199.1| Arabidopsis thaliana AtRAD23-4beta mRNA for RAD23-like protein,
           complete cds
          Length = 1032

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                       
Query: 228 caaggaaaaattctcaaggatgataccactctggatgctaacaaggttgcagagaacagt 287
           ||||||||  |||| |||||||| |||||  |||| |  ||||| ||||  |||||||||
Sbjct: 142 caaggaaaggttctaaaggatgagaccacattggaagagaacaatgttgttgagaacagt 201

                               
Query: 288 ttccttgttataatgctgtc 307
           ||| ||||||| ||| ||||
Sbjct: 202 ttcattgttatcatgttgtc 221
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>dbj|AB109198.1| Arabidopsis thaliana AtRAD23-4alpha mRNA for RAD23-like protein,
           complete cds
          Length = 1137

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                       
Query: 228 caaggaaaaattctcaaggatgataccactctggatgctaacaaggttgcagagaacagt 287
           ||||||||  |||| |||||||| |||||  |||| |  ||||| ||||  |||||||||
Sbjct: 142 caaggaaaggttctaaaggatgagaccacattggaagagaacaatgttgttgagaacagt 201

                               
Query: 288 ttccttgttataatgctgtc 307
           ||| ||||||| ||| ||||
Sbjct: 202 ttcattgttatcatgttgtc 221
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>dbj|AB005248.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXI10
          Length = 83646

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                         
Query: 228   caaggaaaaattctcaaggatgataccactctggatgctaacaaggttgcagagaacagt 287
             ||||||||  |||| |||||||| |||||  |||| |  ||||| ||||  |||||||||
Sbjct: 78652 caaggaaaggttctaaaggatgagaccacattggaagagaacaatgttgttgagaacagt 78711

                                 
Query: 288   ttccttgttataatgctgtc 307
             ||| ||||||| ||| ||||
Sbjct: 78712 ttcattgttatcatgttgtc 78731
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>gb|AC002122.1|AC002122 Human unknown clone GS1-293J4 from 5p15.2, complete sequence
          Length = 79931

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   tcatatatcaaggaaaaatt 239
             ||||||||||||||||||||
Sbjct: 39786 tcatatatcaaggaaaaatt 39805
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>dbj|AK069065.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007H17, full
           insert sequence
          Length = 1675

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  gtgaagaccctcaagggcac 115
           ||||||||||||||||||||
Sbjct: 255 gtgaagaccctcaagggcac 274
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>emb|AL808112.34| Mouse DNA sequence from clone RP23-57N22 on chromosome 4, complete
              sequence
          Length = 236158

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 487    cttcagctgtttctgatact 506
              ||||||||||||||||||||
Sbjct: 142575 cttcagctgtttctgatact 142594
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>emb|AL844485.7| Mouse DNA sequence from clone RP23-436D21 on chromosome 2, complete
             sequence
          Length = 43742

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   taacaaggttgcagagaaca 285
             ||||||||||||||||||||
Sbjct: 16813 taacaaggttgcagagaaca 16794
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>gb|AC087857.3| Homo sapiens chromosome 3 clone RP11-149E15 map 3p, complete sequence
          Length = 173606

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 399    ccacctgtccctgttgcctc 418
              ||||||||||||||||||||
Sbjct: 162524 ccacctgtccctgttgcctc 162543


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,481,325
Number of Sequences: 3902068
Number of extensions: 5481325
Number of successful extensions: 113820
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 113617
Number of HSP's gapped (non-prelim): 198
length of query: 647
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 624
effective length of database: 17,143,297,704
effective search space: 10697417767296
effective search space used: 10697417767296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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