| Clone Name | basd27f16 |
|---|---|
| Clone Library Name | barley_pub |
>APK1B_ARATH (P46573) Protein kinase APK1B, chloroplast precursor (EC 2.7.11.1)| Length = 412 Score = 85.5 bits (210), Expect = 8e-17 Identities = 39/49 (79%), Positives = 45/49 (91%) Frame = +1 Query: 367 RSEGEILESANVKAFTFNELRTATRNFRPDSVLGEGGXGSVFKGWIDEK 513 R+EGEIL+S N+K+FTF EL+ ATRNFRPDSVLGEGG GSVFKGWIDE+ Sbjct: 43 RTEGEILQSPNLKSFTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQ 91
>APK1A_ARATH (Q06548) Protein kinase APK1A, chloroplast precursor (EC 2.7.11.1)| Length = 410 Score = 84.0 bits (206), Expect = 2e-16 Identities = 38/49 (77%), Positives = 45/49 (91%) Frame = +1 Query: 367 RSEGEILESANVKAFTFNELRTATRNFRPDSVLGEGGXGSVFKGWIDEK 513 R+EGEIL+S N+K+F+F EL++ATRNFRPDSVLGEGG G VFKGWIDEK Sbjct: 42 RTEGEILQSPNLKSFSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEK 90
>NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK (EC 2.7.11.1)| Length = 389 Score = 79.3 bits (194), Expect = 6e-15 Identities = 35/48 (72%), Positives = 44/48 (91%) Frame = +1 Query: 367 RSEGEILESANVKAFTFNELRTATRNFRPDSVLGEGGXGSVFKGWIDE 510 R+EGEIL++AN+K F+ +EL++ATRNFRPDSV+GEGG G VFKGWIDE Sbjct: 42 RTEGEILQNANLKNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDE 89
>CX32_ARATH (P27450) Probable serine/threonine-protein kinase Cx32, chloroplast| precursor (EC 2.7.11.1) Length = 419 Score = 65.9 bits (159), Expect = 6e-11 Identities = 25/44 (56%), Positives = 38/44 (86%) Frame = +1 Query: 376 GEILESANVKAFTFNELRTATRNFRPDSVLGEGGXGSVFKGWID 507 G++LES N+K + F +L+TAT+NF+PDS+LG+GG G V++GW+D Sbjct: 63 GKLLESPNLKVYNFLDLKTATKNFKPDSMLGQGGFGKVYRGWVD 106
>RLCK7_ARATH (Q9LQQ8) Probable serine/threonine-protein kinase RLCKVII (EC| 2.7.11.1) Length = 423 Score = 47.0 bits (110), Expect = 3e-05 Identities = 22/36 (61%), Positives = 25/36 (69%) Frame = +1 Query: 403 KAFTFNELRTATRNFRPDSVLGEGGXGSVFKGWIDE 510 + FTF EL AT NFR D LGEGG G VFKG I++ Sbjct: 89 QTFTFQELAEATGNFRSDCFLGEGGFGKVFKGTIEK 124
>PBS1_ARATH (Q9FE20) Serine/threonine-protein kinase PBS1 (EC 2.7.11.1)| (AvrPphB susceptible protein 1) Length = 456 Score = 45.8 bits (107), Expect = 7e-05 Identities = 20/33 (60%), Positives = 23/33 (69%) Frame = +1 Query: 409 FTFNELRTATRNFRPDSVLGEGGXGSVFKGWID 507 F F EL AT NF PD+ LGEGG G V+KG +D Sbjct: 74 FAFRELAAATMNFHPDTFLGEGGFGRVYKGRLD 106
>NORK_MEDTR (Q8L4H4) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does| not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) Length = 925 Score = 37.7 bits (86), Expect = 0.019 Identities = 16/42 (38%), Positives = 29/42 (69%) Frame = +1 Query: 385 LESANVKAFTFNELRTATRNFRPDSVLGEGGXGSVFKGWIDE 510 ++S +VK FT + AT ++ +++GEGG GSV++G +D+ Sbjct: 578 IKSVSVKPFTLEYIEQATEQYK--TLIGEGGFGSVYRGTLDD 617
>NORK_PEA (Q8LKZ1) Nodulation receptor kinase precursor (EC 2.7.11.1)| Length = 924 Score = 37.7 bits (86), Expect = 0.019 Identities = 16/42 (38%), Positives = 29/42 (69%) Frame = +1 Query: 385 LESANVKAFTFNELRTATRNFRPDSVLGEGGXGSVFKGWIDE 510 ++S +VK FT + AT ++ +++GEGG GSV++G +D+ Sbjct: 577 IKSVSVKPFTLEYIELATEKYK--TLIGEGGFGSVYRGTLDD 616
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 36.6 bits (83), Expect = 0.041 Identities = 17/46 (36%), Positives = 25/46 (54%) Frame = +1 Query: 361 VQRSEGEILESANVKAFTFNELRTATRNFRPDSVLGEGGXGSVFKG 498 V E + +K F+ EL+ A+ NF ++LG GG G V+KG Sbjct: 261 VPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKG 306
>IRAK4_HUMAN (Q9NWZ3) Interleukin-1 receptor-associated kinase 4 (EC 2.7.11.1)| (IRAK-4) (NY-REN-64 antigen) Length = 460 Score = 36.6 bits (83), Expect = 0.041 Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 8/53 (15%) Frame = +1 Query: 373 EGEILESANVK--AFTFNELRTATRNF--RPDSV----LGEGGXGSVFKGWID 507 E + LE ++ + +F+F EL+ T NF RP SV +GEGG G V+KG+++ Sbjct: 154 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN 206
>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC| 2.7.11.1) Length = 942 Score = 35.8 bits (81), Expect = 0.070 Identities = 16/40 (40%), Positives = 26/40 (65%) Frame = +1 Query: 379 EILESANVKAFTFNELRTATRNFRPDSVLGEGGXGSVFKG 498 +++E+ N+ + LR+ T NF D++LG GG G V+KG Sbjct: 567 QMVEAGNM-LISIQVLRSVTNNFSSDNILGSGGFGVVYKG 605
>KPEL_DROME (Q05652) Probable serine/threonine-protein kinase pelle (EC| 2.7.11.1) Length = 501 Score = 34.3 bits (77), Expect = 0.20 Identities = 18/46 (39%), Positives = 26/46 (56%) Frame = +1 Query: 361 VQRSEGEILESANVKAFTFNELRTATRNFRPDSVLGEGGXGSVFKG 498 VQR+ +LE + EL AT + PD+ LG+GG G V++G Sbjct: 191 VQRAAESLLE------IDYAELENATDGWSPDNRLGQGGFGDVYRG 230
>BRI1_LYCPE (Q8L899) Systemin receptor SR160 precursor (EC 2.7.11.1)| (Brassinosteroid LRR receptor kinase) Length = 1207 Score = 33.5 bits (75), Expect = 0.35 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +1 Query: 400 VKAFTFNELRTATRNFRPDSVLGEGGXGSVFKGWIDE 510 ++ TF +L AT F DS++G GG G V+K + + Sbjct: 873 LRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKD 909
>BRI1_LYCES (Q8GUQ5) Brassinosteroid LRR receptor kinase precursor (EC| 2.7.11.1) (tBRI1) (Altered brassinolide sensitivity 1) (Systemin receptor SR160) Length = 1207 Score = 33.5 bits (75), Expect = 0.35 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +1 Query: 400 VKAFTFNELRTATRNFRPDSVLGEGGXGSVFKGWIDE 510 ++ TF +L AT F DS++G GG G V+K + + Sbjct: 873 LRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKD 909
>BRI1_ARATH (O22476) BRASSINOSTEROID INSENSITIVE 1 precursor (EC 2.7.11.1)| (AtBRI1) (Brassinosteroid LRR receptor kinase) Length = 1196 Score = 33.5 bits (75), Expect = 0.35 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +1 Query: 400 VKAFTFNELRTATRNFRPDSVLGEGGXGSVFK 495 ++ TF +L AT F DS++G GG G V+K Sbjct: 868 LRKLTFADLLQATNGFHNDSLIGSGGFGDVYK 899
>CRI4_MAIZE (O24585) Putative receptor protein kinase CRINKLY4 precursor (EC| 2.7.11.1) Length = 901 Score = 33.1 bits (74), Expect = 0.46 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = +1 Query: 379 EILESANVKAFTFNELRTATRNFRPDSVLGEGGXGSVFKG 498 E L+ + F++ EL AT F DS +G+G VFKG Sbjct: 483 EDLKIRRAQEFSYEELEQATGGFSEDSQVGKGSFSCVFKG 522
>IRAK4_MOUSE (Q8R4K2) Interleukin-1 receptor-associated kinase 4 (EC 2.7.11.1)| (IRAK-4) Length = 459 Score = 33.1 bits (74), Expect = 0.46 Identities = 19/49 (38%), Positives = 33/49 (67%), Gaps = 8/49 (16%) Frame = +1 Query: 385 LESANVK--AFTFNELRTATRNF--RPDSV----LGEGGXGSVFKGWID 507 +ES++ + +F+F+EL++ T NF +P S +GEGG G V+KG ++ Sbjct: 158 VESSDTRFHSFSFHELKSITNNFDEQPASAGGNRMGEGGFGVVYKGCVN 206
>BRL3_ARATH (Q9LJF3) Serine/threonine-protein kinase BRI1-like 3 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 3) Length = 1164 Score = 32.7 bits (73), Expect = 0.60 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +1 Query: 400 VKAFTFNELRTATRNFRPDSVLGEGGXGSVFK 495 ++ TF L AT F DS++G GG G V+K Sbjct: 843 LRKLTFAHLLEATNGFSADSMIGSGGFGDVYK 874
>KPRO_MAIZE (P17801) Putative receptor protein kinase ZmPK1 precursor (EC| 2.7.11.1) Length = 817 Score = 32.0 bits (71), Expect = 1.0 Identities = 14/40 (35%), Positives = 27/40 (67%) Frame = +1 Query: 391 SANVKAFTFNELRTATRNFRPDSVLGEGGXGSVFKGWIDE 510 ++N + +++ EL ATR F+ + LG G G+V+KG +++ Sbjct: 518 TSNFRRYSYRELVKATRKFKVE--LGRGESGTVYKGVLED 555
>CL43_BOVIN (P42916) Collectin-43 precursor (CL-43) (43 kDa collectin)| Length = 321 Score = 32.0 bits (71), Expect = 1.0 Identities = 19/33 (57%), Positives = 19/33 (57%), Gaps = 4/33 (12%) Frame = -2 Query: 213 GRAGSSGPQIEP----PPGMEQPAGR*ENPSNR 127 GR G GPQ E PPGM PAGR E PS R Sbjct: 52 GRDGKEGPQGEKGDPGPPGMPGPAGR-EGPSGR 83
>TRUA_PYRHO (O58941) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine| isomerase I) (tRNA pseudouridylate synthase I) Length = 262 Score = 31.2 bits (69), Expect = 1.7 Identities = 15/36 (41%), Positives = 23/36 (63%) Frame = +1 Query: 361 VQRSEGEILESANVKAFTFNELRTATRNFRPDSVLG 468 V+ EGEI+++ N FNEL++A+R + S LG Sbjct: 23 VRTVEGEIIKALNNSGIMFNELKSASRTDKGVSALG 58
>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2) (Protein VASCULAR HIGHWAY 1) Length = 1143 Score = 30.4 bits (67), Expect = 3.0 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +1 Query: 400 VKAFTFNELRTATRNFRPDSVLGEGGXGSVFKGWIDE 510 ++ F++L AT F S++G GG G VFK + + Sbjct: 823 LRKLKFSQLIEATNGFSAASMIGHGGFGEVFKATLKD 859
>SFTPD_BOVIN (P35246) Pulmonary surfactant-associated protein D precursor (SP-D)| (PSP-D) Length = 369 Score = 30.0 bits (66), Expect = 3.9 Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 8/49 (16%) Frame = -2 Query: 249 ADLGAPAVPHG----QGRAGSSGPQIEP----PPGMEQPAGR*ENPSNR 127 A + PA P G G AG GP+ + PPGM PAGR E PS + Sbjct: 75 AGMPGPAGPIGLKGDNGSAGEPGPKGDTGPPGPPGMPGPAGR-EGPSGK 122
>BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1) Length = 1166 Score = 29.6 bits (65), Expect = 5.0 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +1 Query: 400 VKAFTFNELRTATRNFRPDSVLGEGGXGSVFK 495 ++ TF L AT F ++++G GG G V+K Sbjct: 844 LRKLTFAHLLEATNGFSAETMVGSGGFGEVYK 875
>DRS1_CRYNE (Q5KIK3) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 808 Score = 29.6 bits (65), Expect = 5.0 Identities = 11/40 (27%), Positives = 23/40 (57%) Frame = -3 Query: 203 DRAGLKSSRRRGWSSRPVGERTQAIDRSAGRNHGGLRSRP 84 ++AG +++G + R G + A D ++H G+R++P Sbjct: 750 EKAGKGKDKKKGKARRVTGGKGSAFDSEGKKSHEGMRAKP 789
>DPY7_CAEEL (P34688) Cuticle collagen dpy-7 precursor (Protein dumpy-7)| Length = 318 Score = 29.6 bits (65), Expect = 5.0 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 4/47 (8%) Frame = -2 Query: 240 GAPAVPHGQGRAGSSGPQIEP----PPGMEQPAGR*ENPSNRSIGRT 112 G P P GR G +GPQ EP PG++ P P + SIG T Sbjct: 171 GLPGRPGKPGRVGDAGPQGEPGEQGEPGIKGP------PGDDSIGGT 211
>REPS2_MOUSE (Q80XA6) RalBP1-associated Eps domain-containing protein 2| (RalBP1-interacting protein 2) (Partner of RalBP1) Length = 521 Score = 29.6 bits (65), Expect = 5.0 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = -2 Query: 231 AVPHGQGRAGSSGPQIEPPPGMEQPAGR*ENPSNRSIGRTEPRR 100 ++ HG + S Q+ P P QP G+ E PS+ G RR Sbjct: 67 SLSHGYSKLRSGTEQMHPAPYERQPIGQPEGPSSEGPGAKPFRR 110
>CO4A2_HUMAN (P08572) Collagen alpha-2(IV) chain precursor| Length = 1712 Score = 29.3 bits (64), Expect = 6.6 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 4/34 (11%) Frame = -2 Query: 240 GAPAVPHGQGRAGSSGPQIEPP----PGMEQPAG 151 GAP P +G AG SGPQ P PG + P G Sbjct: 1317 GAPGTPGTKGWAGDSGPQGRPGVFGLPGEKGPRG 1350
>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor| Length = 1496 Score = 29.3 bits (64), Expect = 6.6 Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 1/32 (3%) Frame = -2 Query: 243 LGAPAVPHGQGRAGSSGPQIEP-PPGMEQPAG 151 LG P V G AG GP EP PPG P G Sbjct: 1193 LGPPGVRGSVGEAGPEGPPGEPGPPGPPGPPG 1224
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 29.3 bits (64), Expect = 6.6 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = -2 Query: 240 GAPAVPHGQGRAGSSGPQIEPPPGMEQPAG 151 G P +P G+ G +GPQ PPG PAG Sbjct: 599 GGPGLPGPAGKNGETGPQ--GPPGPTGPAG 626
>PANX2_MOUSE (Q6IMP4) Pannexin-2| Length = 607 Score = 29.3 bits (64), Expect = 6.6 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = -2 Query: 246 DLGAPAVPHGQGRAGSSGPQIEPPPGMEQ 160 D GA A H +G G SGP PP E+ Sbjct: 469 DAGARAAHHYKGSGGDSGPSSAPPAASEK 497
>RPOA_WOLPM (Q73HA9) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (RNAP| alpha subunit) (Transcriptase alpha chain) (RNA polymerase alpha subunit) Length = 355 Score = 28.9 bits (63), Expect = 8.6 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = +1 Query: 361 VQRSEGEILESANVKAFTFNELRTATRNF 447 VQ++EGE+L +AN + NE++ NF Sbjct: 300 VQKTEGEMLRTANFGRKSLNEIKAVLTNF 328
>APX7_ORYSA (Q7XJ02) Probable L-ascorbate peroxidase 7, chloroplast precursor| (EC 1.11.1.11) Length = 359 Score = 28.9 bits (63), Expect = 8.6 Identities = 15/56 (26%), Positives = 20/56 (35%) Frame = -2 Query: 318 PVPASIPGICPXXXXXXXXXXXGADLGAPAVPHGQGRAGSSGPQIEPPPGMEQPAG 151 P+ P I + G P +P GR +GP+ PP G AG Sbjct: 163 PIKDKYPNISYADLFQLASATAIEEAGGPKIPMTYGRIDVTGPEQCPPEGKLPDAG 218
>MYSC_ACACA (P10569) Myosin IC heavy chain| Length = 1168 Score = 28.9 bits (63), Expect = 8.6 Identities = 16/31 (51%), Positives = 17/31 (54%) Frame = -2 Query: 240 GAPAVPHGQGRAGSSGPQIEPPPGMEQPAGR 148 GAP P G GRAG G + P PG P GR Sbjct: 1083 GAP--PPGAGRAGPPGGRGMPAPGGAAPRGR 1111
>FCN3_HUMAN (O75636) Ficolin-3 precursor (Collagen/fibrinogen domain-containing| protein 3) (Collagen/fibrinogen domain-containing lectin 3 p35) (Hakata antigen) Length = 299 Score = 28.9 bits (63), Expect = 8.6 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%) Frame = -2 Query: 234 PAVPHGQGRAGSSGPQIEP-PPGMEQPAGR*ENPSN 130 P P G G+ GPQ P PPG P G +P N Sbjct: 47 PGAPGSPGEKGAPGPQGPPGPPGKMGPKGEPGDPVN 82
>COIA1_MOUSE (P39061) Collagen alpha-1(XVIII) chain precursor [Contains:| Endostatin] Length = 1774 Score = 28.9 bits (63), Expect = 8.6 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 1/31 (3%) Frame = -2 Query: 240 GAPAVPHGQGRAGSSGPQIEP-PPGMEQPAG 151 G P VP +G G GP P PPG E P G Sbjct: 956 GLPGVPGKEGPPGFPGPPGPPGPPGKEGPPG 986
>CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodpasture antigen)| Length = 1670 Score = 28.9 bits (63), Expect = 8.6 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 4/35 (11%) Frame = -2 Query: 240 GAPAVPHGQGRAGSSGPQIEP----PPGMEQPAGR 148 G P +P G G GP+ +P PPG + P GR Sbjct: 774 GLPGLPGTPGNEGLDGPRGDPGQPGPPGEQGPPGR 808
>COL2_CAEEL (P17656) Cuticle collagen 2 precursor| Length = 301 Score = 28.9 bits (63), Expect = 8.6 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 6/52 (11%) Frame = -2 Query: 240 GAPAVPHGQGRAGSS--GPQIEP----PPGMEQPAGR*ENPSNRSIGRTEPR 103 GAP P G G G+S G EP PPG PAG P G P+ Sbjct: 198 GAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPK 249
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 28.9 bits (63), Expect = 8.6 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 4/36 (11%) Frame = -2 Query: 246 DLGAPAVPHGQGRAGSSG----PQIEPPPGMEQPAG 151 D GAP P G+G AG+ G P + PG+ AG Sbjct: 664 DAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAG 699
>CL46_BOVIN (Q8MHZ9) Collectin-46 precursor (CL-46) (46 kDa collectin)| Length = 371 Score = 28.9 bits (63), Expect = 8.6 Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 5/41 (12%) Frame = -2 Query: 234 PAVPHGQ-GRAGSSGPQIEP----PPGMEQPAGR*ENPSNR 127 P P G G AG GP+ + PPGM PAGR E PS + Sbjct: 83 PIGPKGDNGSAGEPGPKGDTGPPGPPGMPGPAGR-EGPSGK 122 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,694,832 Number of Sequences: 219361 Number of extensions: 766435 Number of successful extensions: 3481 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 2677 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3438 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3812186532 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)