ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd27f16 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_493889.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1188 Score = 163 bits (82), Expect = 7e-37 Identities = 132/149 (88%) Strand = Plus / Plus Query: 366 acggagcgagggtgagattctggagtcagcgaacgtcaaggcctttaccttcaatgagct 425 ||||||||||| |||||| |||||| |||| || |||||||||||| ||||||||||||| Sbjct: 129 acggagcgaggatgagatcctggaggcagcaaatgtcaaggcctttgccttcaatgagct 188 Query: 426 aaggaccgccacgagaaacttccggccggacagcgtgctaggcgagggagggnttgggtc 485 ||||| ||||| |||||||||||||| ||||| ||||| || |||||||| |||| || Sbjct: 189 gaggactgccaccagaaacttccggccagacagtgtgcttggtgagggaggctttggatc 248 Query: 486 agtcttcaaggggtggatcgatgagaaga 514 ||||||||| ||||||||||||||||||| Sbjct: 249 agtcttcaaagggtggatcgatgagaaga 277 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 220 atggggaactgctggggcgccaagatcagctc 251 |||||||| ||||||||||||||||||||||| Sbjct: 1 atggggaattgctggggcgccaagatcagctc 32
>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04, complete sequence Length = 176678 Score = 163 bits (82), Expect = 7e-37 Identities = 132/149 (88%) Strand = Plus / Minus Query: 366 acggagcgagggtgagattctggagtcagcgaacgtcaaggcctttaccttcaatgagct 425 ||||||||||| |||||| |||||| |||| || |||||||||||| ||||||||||||| Sbjct: 65040 acggagcgaggatgagatcctggaggcagcaaatgtcaaggcctttgccttcaatgagct 64981 Query: 426 aaggaccgccacgagaaacttccggccggacagcgtgctaggcgagggagggnttgggtc 485 ||||| ||||| |||||||||||||| ||||| ||||| || |||||||| |||| || Sbjct: 64980 gaggactgccaccagaaacttccggccagacagtgtgcttggtgagggaggctttggatc 64921 Query: 486 agtcttcaaggggtggatcgatgagaaga 514 ||||||||| ||||||||||||||||||| Sbjct: 64920 agtcttcaaagggtggatcgatgagaaga 64892 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 218 ccatggggaactgctggggcgccaagatcagctc 251 |||||||||| ||||||||||||||||||||||| Sbjct: 65901 ccatggggaattgctggggcgccaagatcagctc 65868
>gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01, complete sequence Length = 151589 Score = 163 bits (82), Expect = 7e-37 Identities = 132/149 (88%) Strand = Plus / Minus Query: 366 acggagcgagggtgagattctggagtcagcgaacgtcaaggcctttaccttcaatgagct 425 ||||||||||| |||||| |||||| |||| || |||||||||||| ||||||||||||| Sbjct: 147439 acggagcgaggatgagatcctggaggcagcaaatgtcaaggcctttgccttcaatgagct 147380 Query: 426 aaggaccgccacgagaaacttccggccggacagcgtgctaggcgagggagggnttgggtc 485 ||||| ||||| |||||||||||||| ||||| ||||| || |||||||| |||| || Sbjct: 147379 gaggactgccaccagaaacttccggccagacagtgtgcttggtgagggaggctttggatc 147320 Query: 486 agtcttcaaggggtggatcgatgagaaga 514 ||||||||| ||||||||||||||||||| Sbjct: 147319 agtcttcaaagggtggatcgatgagaaga 147291 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 218 ccatggggaactgctggggcgccaagatcagctc 251 |||||||||| ||||||||||||||||||||||| Sbjct: 148300 ccatggggaattgctggggcgccaagatcagctc 148267
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 163 bits (82), Expect = 7e-37 Identities = 132/149 (88%) Strand = Plus / Minus Query: 366 acggagcgagggtgagattctggagtcagcgaacgtcaaggcctttaccttcaatgagct 425 ||||||||||| |||||| |||||| |||| || |||||||||||| ||||||||||||| Sbjct: 547641 acggagcgaggatgagatcctggaggcagcaaatgtcaaggcctttgccttcaatgagct 547582 Query: 426 aaggaccgccacgagaaacttccggccggacagcgtgctaggcgagggagggnttgggtc 485 ||||| ||||| |||||||||||||| ||||| ||||| || |||||||| |||| || Sbjct: 547581 gaggactgccaccagaaacttccggccagacagtgtgcttggtgagggaggctttggatc 547522 Query: 486 agtcttcaaggggtggatcgatgagaaga 514 ||||||||| ||||||||||||||||||| Sbjct: 547521 agtcttcaaagggtggatcgatgagaaga 547493 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 218 ccatggggaactgctggggcgccaagatcagctc 251 |||||||||| ||||||||||||||||||||||| Sbjct: 548502 ccatggggaattgctggggcgccaagatcagctc 548469 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ttcttcctctccctctctcc 34 |||||||||||||||||||| Sbjct: 27379411 ttcttcctctccctctctcc 27379392 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccc 35 |||||||||||||| ||||||||| Sbjct: 25187575 tctttcttcctctctctctctccc 25187552 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctccctctctccctcgctct 42 |||||||||||||||||||| Sbjct: 13164248 ctccctctctccctcgctct 13164267
>dbj|AK073169.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020B11, full insert sequence Length = 2039 Score = 163 bits (82), Expect = 7e-37 Identities = 132/149 (88%) Strand = Plus / Plus Query: 366 acggagcgagggtgagattctggagtcagcgaacgtcaaggcctttaccttcaatgagct 425 ||||||||||| |||||| |||||| |||| || |||||||||||| ||||||||||||| Sbjct: 681 acggagcgaggatgagatcctggaggcagcaaatgtcaaggcctttgccttcaatgagct 740 Query: 426 aaggaccgccacgagaaacttccggccggacagcgtgctaggcgagggagggnttgggtc 485 ||||| ||||| |||||||||||||| ||||| ||||| || |||||||| |||| || Sbjct: 741 gaggactgccaccagaaacttccggccagacagtgtgcttggtgagggaggctttggatc 800 Query: 486 agtcttcaaggggtggatcgatgagaaga 514 ||||||||| ||||||||||||||||||| Sbjct: 801 agtcttcaaagggtggatcgatgagaaga 829 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 218 ccatggggaactgctggggcgccaagatcagctc 251 |||||||||| ||||||||||||||||||||||| Sbjct: 551 ccatggggaattgctggggcgccaagatcagctc 584
>gb|AY106357.1| Zea mays PCO078250 mRNA sequence Length = 2030 Score = 115 bits (58), Expect = 1e-22 Identities = 123/145 (84%) Strand = Plus / Plus Query: 370 agcgagggtgagattctggagtcagcgaacgtcaaggcctttaccttcaatgagctaagg 429 ||||||| ||||| |||||||| || ||||||| |||||| | |||||| ||||| ||| Sbjct: 652 agcgaggacgagatcctggagtcggccaacgtcagggccttcagcttcaacgagctgagg 711 Query: 430 accgccacgagaaacttccggccggacagcgtgctaggcgagggagggnttgggtcagtc 489 |||||||| || |||||| |||||||||||||||| |||||||| ||| | || || ||| Sbjct: 712 accgccaccaggaacttcaggccggacagcgtgctgggcgagggcgggttcggatccgtc 771 Query: 490 ttcaaggggtggatcgatgagaaga 514 |||||||| ||| |||| ||||||| Sbjct: 772 ttcaagggctgggtcgacgagaaga 796 Score = 69.9 bits (35), Expect = 8e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 218 ccatggggaactgctggggcgccaagatcagctccgaca 256 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 485 ccatgggcaactgctggggcgccaagatcagctccgaca 523
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 75.8 bits (38), Expect = 1e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 434 ccacgagaaacttccggccggacagcgtgctaggcgagggagggnttgggtcagtcttca 493 ||||||| |||||||||||||||||| |||| || ||||| ||| | || || || |||| Sbjct: 9244804 ccacgaggaacttccggccggacagcctgcttggggagggcgggttcggctcggtgttca 9244745 Query: 494 aggggtggatcgatgag 510 ||||||||||||||||| Sbjct: 9244744 aggggtggatcgatgag 9244728 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 15 ttcttcctctccctctctccctc 37 ||||||||||||||||||||||| Sbjct: 16503266 ttcttcctctccctctctccctc 16503288 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 32009040 ctctccctctctccctcgctct 32009019
>gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032O19, from chromosome 3, complete sequence Length = 142248 Score = 75.8 bits (38), Expect = 1e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 434 ccacgagaaacttccggccggacagcgtgctaggcgagggagggnttgggtcagtcttca 493 ||||||| |||||||||||||||||| |||| || ||||| ||| | || || || |||| Sbjct: 41587 ccacgaggaacttccggccggacagcctgcttggggagggcgggttcggctcggtgttca 41646 Query: 494 aggggtggatcgatgag 510 ||||||||||||||||| Sbjct: 41647 aggggtggatcgatgag 41663
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 75.8 bits (38), Expect = 1e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 434 ccacgagaaacttccggccggacagcgtgctaggcgagggagggnttgggtcagtcttca 493 ||||||| |||||||||||||||||| |||| || ||||| ||| | || || || |||| Sbjct: 9242637 ccacgaggaacttccggccggacagcctgcttggggagggcgggttcggctcggtgttca 9242578 Query: 494 aggggtggatcgatgag 510 ||||||||||||||||| Sbjct: 9242577 aggggtggatcgatgag 9242561 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 15 ttcttcctctccctctctccctc 37 ||||||||||||||||||||||| Sbjct: 16496899 ttcttcctctccctctctccctc 16496921 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 32099552 ctctccctctctccctcgctct 32099531
>gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0014A21, from chromosome 3, complete sequence Length = 134014 Score = 75.8 bits (38), Expect = 1e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 434 ccacgagaaacttccggccggacagcgtgctaggcgagggagggnttgggtcagtcttca 493 ||||||| |||||||||||||||||| |||| || ||||| ||| | || || || |||| Sbjct: 111449 ccacgaggaacttccggccggacagcctgcttggggagggcgggttcggctcggtgttca 111508 Query: 494 aggggtggatcgatgag 510 ||||||||||||||||| Sbjct: 111509 aggggtggatcgatgag 111525
>dbj|AK102905.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113F11, full insert sequence Length = 1608 Score = 75.8 bits (38), Expect = 1e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 434 ccacgagaaacttccggccggacagcgtgctaggcgagggagggnttgggtcagtcttca 493 ||||||| |||||||||||||||||| |||| || ||||| ||| | || || || |||| Sbjct: 424 ccacgaggaacttccggccggacagcctgcttggggagggcgggttcggctcggtgttca 483 Query: 494 aggggtggatcgatgag 510 ||||||||||||||||| Sbjct: 484 aggggtggatcgatgag 500
>gb|AY106579.1| Zea mays PCO084622 mRNA sequence Length = 538 Score = 69.9 bits (35), Expect = 8e-09 Identities = 61/70 (87%) Strand = Plus / Plus Query: 442 aacttccggccggacagcgtgctaggcgagggagggnttgggtcagtcttcaaggggtgg 501 ||||||||||| |||||||| || ||||||||||| | || || ||||||||||||||| Sbjct: 213 aacttccggcccgacagcgtcctcggcgagggaggcttcggctccgtcttcaaggggtgg 272 Query: 502 atcgatgaga 511 ||||| |||| Sbjct: 273 atcgacgaga 282
>ref|NM_189481.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1404 Score = 63.9 bits (32), Expect = 5e-07 Identities = 70/83 (84%) Strand = Plus / Plus Query: 415 ttcaatgagctaaggaccgccacgagaaacttccggccggacagcgtgctaggcgaggga 474 ||||| ||||| | ||| || ||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 370 ttcaacgagctcaagacggcgacgaggaacttccggcccgacagcgtgctcggcgaggga 429 Query: 475 gggnttgggtcagtcttcaaggg 497 || | || || ||||||||||| Sbjct: 430 ggcttcggctccgtcttcaaggg 452
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 5e-07 Identities = 70/83 (84%) Strand = Plus / Minus Query: 415 ttcaatgagctaaggaccgccacgagaaacttccggccggacagcgtgctaggcgaggga 474 ||||| ||||| | ||| || ||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 42976300 ttcaacgagctcaagacggcgacgaggaacttccggcccgacagcgtgctcggcgaggga 42976241 Query: 475 gggnttgggtcagtcttcaaggg 497 || | || || ||||||||||| Sbjct: 42976240 ggcttcggctccgtcttcaaggg 42976218 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 21799549 ctctccctctctccctcgctct 21799528 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 1372296 ctctccctctctccctcgctct 1372275
>dbj|AP003298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698H10 Length = 153449 Score = 63.9 bits (32), Expect = 5e-07 Identities = 70/83 (84%) Strand = Plus / Minus Query: 415 ttcaatgagctaaggaccgccacgagaaacttccggccggacagcgtgctaggcgaggga 474 ||||| ||||| | ||| || ||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 77179 ttcaacgagctcaagacggcgacgaggaacttccggcccgacagcgtgctcggcgaggga 77120 Query: 475 gggnttgggtcagtcttcaaggg 497 || | || || ||||||||||| Sbjct: 77119 ggcttcggctccgtcttcaaggg 77097
>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518C01 Length = 173555 Score = 63.9 bits (32), Expect = 5e-07 Identities = 70/83 (84%) Strand = Plus / Minus Query: 415 ttcaatgagctaaggaccgccacgagaaacttccggccggacagcgtgctaggcgaggga 474 ||||| ||||| | ||| || ||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 170034 ttcaacgagctcaagacggcgacgaggaacttccggcccgacagcgtgctcggcgaggga 169975 Query: 475 gggnttgggtcagtcttcaaggg 497 || | || || ||||||||||| Sbjct: 169974 ggcttcggctccgtcttcaaggg 169952
>dbj|AK069546.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023F24, full insert sequence Length = 1841 Score = 63.9 bits (32), Expect = 5e-07 Identities = 70/83 (84%) Strand = Plus / Plus Query: 415 ttcaatgagctaaggaccgccacgagaaacttccggccggacagcgtgctaggcgaggga 474 ||||| ||||| | ||| || ||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 541 ttcaacgagctcaagacggcgacgaggaacttccggcccgacagcgtgctcggcgaggga 600 Query: 475 gggnttgggtcagtcttcaaggg 497 || | || || ||||||||||| Sbjct: 601 ggcttcggctccgtcttcaaggg 623
>gb|AY107751.1| Zea mays PCO078816 mRNA sequence Length = 1530 Score = 60.0 bits (30), Expect = 7e-06 Identities = 65/77 (84%) Strand = Plus / Plus Query: 434 ccacgagaaacttccggccggacagcgtgctaggcgagggagggnttgggtcagtcttca 493 ||||||| |||||| ||||||||||| |||| || ||||| || | ||||| || |||| Sbjct: 409 ccacgaggaacttcaggccggacagcctgctcggggaggggggcttcgggtccgtgttca 468 Query: 494 aggggtggatcgatgag 510 |||||||||| |||||| Sbjct: 469 aggggtggatggatgag 485
>gb|DQ469718.1| Hordeum vulgare subsp. vulgare serine/threonine kinase-like protein ABC1063 mRNA, complete cds Length = 1519 Score = 58.0 bits (29), Expect = 3e-05 Identities = 64/76 (84%) Strand = Plus / Plus Query: 435 cacgagaaacttccggccggacagcgtgctaggcgagggagggnttgggtcagtcttcaa 494 |||||| ||||||||| | |||||| |||| || ||||| || | || || |||||||| Sbjct: 333 cacgaggaacttccggactgacagcctgctcggggaggggggcttcggctccgtcttcaa 392 Query: 495 ggggtggatcgatgag 510 |||||||||||||||| Sbjct: 393 ggggtggatcgatgag 408
>gb|DQ386610.1| Hordeum vulgare subsp. vulgare protein kinase ABC1063 gene, complete cds Length = 7813 Score = 58.0 bits (29), Expect = 3e-05 Identities = 64/76 (84%) Strand = Plus / Plus Query: 435 cacgagaaacttccggccggacagcgtgctaggcgagggagggnttgggtcagtcttcaa 494 |||||| ||||||||| | |||||| |||| || ||||| || | || || |||||||| Sbjct: 4696 cacgaggaacttccggactgacagcctgctcggggaggggggcttcggctccgtcttcaa 4755 Query: 495 ggggtggatcgatgag 510 |||||||||||||||| Sbjct: 4756 ggggtggatcgatgag 4771
>gb|AC087477.8| Homo sapiens chromosome 15, clone RP11-522B15, complete sequence Length = 191434 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctctccctcgctct 42 |||||||||||||||||||||||||| |||| Sbjct: 191020 tctttcttcctctccctctctccctctctct 191050
>gb|AY581834.1| Cynodon dactylon putative serine/threonine-specific protein kinase mRNA, partial cds Length = 636 Score = 50.1 bits (25), Expect = 0.007 Identities = 115/144 (79%), Gaps = 1/144 (0%) Strand = Plus / Plus Query: 370 agcgagggtgagattctggagtcagcgaacgtcaaggcctttaccttcaatgagctaagg 429 ||||| |||||||||||| | ||||| || | || | ||| |||||||| ||||| | | Sbjct: 219 agcgaaggtgagattctgcaatcagccaatgccaggagcttcaccttcaacgagctcaag 278 Query: 430 accgccacgagaaacttccggccggacagcgtgctaggcgagggaggg-nttgggtcagt 488 ||| |||| || |||||||| || ||||| || || |||||||| ||| |||| || || Sbjct: 279 acctccaccaggaacttccgacccgacagtgttctcggcgagggggggctttggctccgt 338 Query: 489 cttcaaggggtggatcgatgagaa 512 |||||| || ||||| |||||||| Sbjct: 339 cttcaaaggatggattgatgagaa 362
>gb|AC116516.7| Mus musculus chromosome 1, clone RP24-336H7, complete sequence Length = 134253 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctctccc 35 |||||||||||||||||||||||| Sbjct: 51207 tctttcttcctctccctctctccc 51230
>gb|AC133649.2| Mus musculus BAC clone RP23-341M13 from chromosome 19, complete sequence Length = 187971 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 11 gtctttcttcctctccctctctccctcgctct 42 |||| |||||||||||||||||||||| |||| Sbjct: 132972 gtctctcttcctctccctctctccctctctct 133003
>gb|AC004861.1| Homo sapiens PAC clone RP4-696N1 from 7, complete sequence Length = 134071 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccc 35 |||||||||||||||||||||||| Sbjct: 73109 tctttcttcctctccctctctccc 73086
>emb|AL645476.26| Mouse DNA sequence from clone RP23-70L6 on chromosome 11 Contains a CpG island, complete sequence Length = 143728 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 14 tttcttcctctccctctctccctc 37 |||||||||||||||||||||||| Sbjct: 56994 tttcttcctctccctctctccctc 56971
>gb|AC148016.3| Mus musculus BAC clone RP23-71B24 from 19, complete sequence Length = 227795 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 11 gtctttcttcctctccctctctccctcgctct 42 |||| |||||||||||||||||||||| |||| Sbjct: 198814 gtctctcttcctctccctctctccctctctct 198783
>gb|AC134886.5| Oryza sativa chromosome 3 BAC OSJNBa0002D18 genomic sequence, complete sequence Length = 145714 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 15 ttcttcctctccctctctccctc 37 ||||||||||||||||||||||| Sbjct: 81067 ttcttcctctccctctctccctc 81045
>gb|AC124107.8| Mus musculus chromosome 5, clone RP24-317M4, complete sequence Length = 194641 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 8 gaggtctttcttcctctccctctctccctcgctct 42 |||||||||||||||||| ||||||| ||| |||| Sbjct: 5891 gaggtctttcttcctctctctctctctctctctct 5857
>gb|AC147135.2| Mus musculus BAC clone RP24-475E12 from chromosome Y, complete sequence Length = 222469 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccctcgctct 42 |||||||||||||||||||||| ||| |||| Sbjct: 53363 tctttcttcctctccctctctctctctctct 53333
>gb|AC140386.4| Mus musculus BAC clone RP24-88H19 from chromosome Y, complete sequence Length = 222469 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccctcgctct 42 |||||||||||||||||||||| ||| |||| Sbjct: 53363 tctttcttcctctccctctctctctctctct 53333
>gb|AC132259.3| Mus musculus BAC clone RP24-369B15 from chromosome 3, complete sequence Length = 131182 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccctcgctct 42 |||||||||||||| ||||||||||| |||| Sbjct: 21490 tctttcttcctctctctctctccctctctct 21460
>gb|AC127233.2| Mus musculus BAC clone RP24-559K11 from chromosome 3, complete sequence Length = 160255 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctcc 34 ||||||||||||||||||||||| Sbjct: 130098 tctttcttcctctccctctctcc 130076
>gb|AC124557.4| Mus musculus BAC clone RP23-247H15 from chromosome 19, complete sequence Length = 178544 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctctccctcgctct 42 ||||||| |||||||||||||||||| |||| Sbjct: 80534 tctttctccctctccctctctccctccctct 80564
>gb|AC129183.3| Mus musculus BAC clone RP23-350M13 from chromosome 3, complete sequence Length = 201277 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccctcgctct 42 |||||||||||||| ||||||||||| |||| Sbjct: 167337 tctttcttcctctctctctctccctctctct 167307
>gb|AC104396.7| Mus musculus BAC clone RP23-413J8 from chromosome 3, complete sequence Length = 195860 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctctcc 34 ||||||||||||||||||||||| Sbjct: 191939 tctttcttcctctccctctctcc 191961
>emb|AL445531.10| Human DNA sequence from clone RP11-546O6 on chromosome 9 Contains the 3' end of the NCBP1 gene for nuclear cap binding protein subunit 1, 80kDa (NCBP, CBP80), the XPA gene for xeroderma pigmentosum, complementation group A (XP1, XPAC), a keratin 18 (KRT18) pseudogene and two CpG islands, complete sequence Length = 111345 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctctccctcgctct 42 |||||||| ||||| |||||||||||||||| Sbjct: 90295 tctttcttactctctctctctccctcgctct 90325
>gb|AC158912.3| Mus musculus chromosome 5, clone RP23-131C17, complete sequence Length = 182161 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 8 gaggtctttcttcctctccctctctccctcgctct 42 |||||||||||||||||| ||||||| ||| |||| Sbjct: 56929 gaggtctttcttcctctctctctctctctctctct 56895
>gb|AC084700.5| Homo sapiens chromosome 15, clone CTD-2013H3, complete sequence Length = 75292 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccctcgctct 42 ||||||||||||| |||||||||||| |||| Sbjct: 63596 tctttcttcctctacctctctccctctctct 63566
>emb|AL591843.14| Mouse DNA sequence from clone RP23-351I6 on chromosome 13 Contains the Prl gene for prolactin and the Csh1 gene for chorionic somatomammotropin hormone 1, complete sequence Length = 94890 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccctcgctct 42 |||||||||||||||||||||| |||| Sbjct: 63020 tcttcctctccctctctccctccctct 62994
>gb|AC110588.4| Homo sapiens chromosome 15, clone CTD-2027G2, complete sequence Length = 138217 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccctcgctct 42 ||||||||||||| |||||||||||| |||| Sbjct: 135598 tctttcttcctctacctctctccctctctct 135568
>gb|AC105292.3| Drosophila melanogaster X BAC RP98-18F10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 161360 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccctcgctct 42 |||||||||||||| ||||||||||| |||| Sbjct: 63898 tctttcttcctctctctctctccctctctct 63868
>dbj|AB044826.1| Equus caballus DNA, microsatellite TKY325 Length = 373 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctctccctcgctct 42 ||||||| |||||||||||||| |||||||| Sbjct: 21 tctttctccctctccctctctctctcgctct 51
>gb|AC074105.3| Oryza sativa chromosome 10 clone OSJNBa0030B02, complete sequence Length = 146836 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 20 cctctccctctctccctcgctct 42 ||||||||||||||||||||||| Sbjct: 27500 cctctccctctctccctcgctct 27522
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 20 cctctccctctctccctcgctct 42 ||||||||||||||||||||||| Sbjct: 2700724 cctctccctctctccctcgctct 2700746 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 22294246 ctctccctctctccctcgctct 22294225 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 22284139 ctctccctctctccctcgctct 22284118 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 15959432 ctctccctctctccctcgctct 15959411
>gb|AC012354.11| Homo sapiens BAC clone RP11-89K21 from 2, complete sequence Length = 171167 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccctcgctct 42 |||||||||||||||||||||| |||| Sbjct: 73423 tcttcctctccctctctccctccctct 73397
>gb|AC004114.1|AC004114 Drosophila melanogaster, chromosome X, region 8E3-8E4, P1 clone DS05468, complete sequence Length = 75307 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccctcgctct 42 |||||||||||||| ||||||||||| |||| Sbjct: 7926 tctttcttcctctctctctctccctctctct 7896
>gb|AE003447.5| Drosophila melanogaster chromosome X, section 31 of 74 of the complete sequence Length = 288721 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctctccctcgctct 42 |||||||||||||| ||||||||||| |||| Sbjct: 204657 tctttcttcctctctctctctccctctctct 204687
>gb|AC102262.9| Mus musculus chromosome 15, clone RP24-216B4, complete sequence Length = 191626 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 20 cctctccctctctccctcgctct 42 ||||||||||||||||||||||| Sbjct: 17638 cctctccctctctccctcgctct 17616
>gb|AC102485.25| Mus musculus chromosome 5, clone RP24-469G19, complete sequence Length = 168799 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 16 tcttcctctccctctctccctcgctct 42 |||||||||||||||||||||| |||| Sbjct: 98474 tcttcctctccctctctccctctctct 98500
>gb|AC157563.12| Mus musculus chromosome 7, clone RP23-414I24, complete sequence Length = 200040 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctctccctcgctct 42 |||||||||||||||||||||| ||| |||| Sbjct: 31388 tctttcttcctctccctctctctctctctct 31418
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 20 cctctccctctctccctcgctct 42 ||||||||||||||||||||||| Sbjct: 2700675 cctctccctctctccctcgctct 2700697 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 22306314 ctctccctctctccctcgctct 22306293 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 22296207 ctctccctctctccctcgctct 22296186 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 15967673 ctctccctctctccctcgctct 15967652
>emb|AL805960.10| Mouse DNA sequence from clone RP23-20P17 on chromosome X, complete sequence Length = 172780 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccctcgctct 42 ||||||| |||||||||||||||||| |||| Sbjct: 99486 tctttctccctctccctctctccctctctct 99456
>emb|AL805969.13| Mouse DNA sequence from clone RP23-40L1 on chromosome 4, complete sequence Length = 252953 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctctccctcgctct 42 |||||||||||||| ||||||||||| |||| Sbjct: 246967 tctttcttcctctctctctctccctctctct 246997
>emb|AL807397.6| Mouse DNA sequence from clone RP23-176N13 on chromosome 4, complete sequence Length = 193939 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 16 tcttcctctccctctctccctcgctct 42 |||||||||||||||||||||| |||| Sbjct: 29736 tcttcctctccctctctccctccctct 29762
>gb|AC160528.9| Mus musculus chromosome 15, clone RP23-310L8, complete sequence Length = 174502 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 20 cctctccctctctccctcgctct 42 ||||||||||||||||||||||| Sbjct: 106280 cctctccctctctccctcgctct 106258
>gb|AC138358.12| Mus musculus chromosome 1, clone RP24-147G10, complete sequence Length = 180227 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 13 ctttcttcctctccctctctccctcgctct 42 |||||| |||||||||||||||||| |||| Sbjct: 6194 ctttctccctctccctctctccctctctct 6223
>gb|AC166060.2| Mus musculus BAC clone RP23-185O8 from chromosome 9, complete sequence Length = 198365 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 18 ttcctctccctctctccctcgctcta 43 |||||||||||||||||||| ||||| Sbjct: 37587 ttcctctccctctctccctctctcta 37562
>gb|AC092716.7| Mus musculus chromosome 5, clone RP23-14J20, complete sequence Length = 215382 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccctc 37 ||||||| |||||||||||||||||| Sbjct: 157308 tctttctccctctccctctctccctc 157283
>gb|AC165274.2| Mus musculus BAC clone RP24-97D3 from chromosome 16, complete sequence Length = 175488 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 cctctccctctctccctcgctc 41 |||||||||||||||||||||| Sbjct: 60173 cctctccctctctccctcgctc 60194
>ref|NM_196779.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0068N06.31), mRNA Length = 2073 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 1981 ctctccctctctccctcgctct 1960
>ref|XM_463315.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1494 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 1281 ctctccctctctccctcgctct 1260
>gb|AF017104.1| Homo sapiens chromosome 7 common fragile site, complete sequence Length = 161155 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 110424 tcttcctctccctctctccctc 110403
>gb|AY020257.1| Oryza sativa microsatellite MRG2582 containing (GA)X12, genomic sequence Length = 224 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 105 ctctccctctctccctcgctct 84
>gb|AY020256.1| Oryza sativa microsatellite MRG2581 containing (GA)X12, genomic sequence Length = 224 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 105 ctctccctctctccctcgctct 84
>gb|AC160995.4| Mus musculus BAC clone RP23-96D5 from chromosome 13, complete sequence Length = 235237 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 220962 tcttcctctccctctctccctc 220941
>gb|AC099695.15| Mus musculus chromosome 10, clone RP23-234P12, complete sequence Length = 169161 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 17 cttcctctccctctctccctcgctct 42 ||||||||||||||||||||| |||| Sbjct: 51187 cttcctctccctctctccctccctct 51162
>gb|AC115719.10| Mus musculus chromosome 18, clone RP24-356J16, complete sequence Length = 177037 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 14131 tcttcctctccctctctccctc 14110
>gb|AC124106.10| Mus musculus chromosome 5, clone RP24-299A7, complete sequence Length = 167372 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 92493 tcttcctctccctctctccctc 92472
>gb|AC119952.12| Mus musculus chromosome 14, clone RP24-448F1, complete sequence Length = 181695 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 65923 tcttcctctccctctctccctc 65902
>gb|AC161283.2| Pan troglodytes BAC clone CH251-354N8 from chromosome 7, complete sequence Length = 160292 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccctc 37 |||||||| ||||||||||||||||| Sbjct: 126053 tctttctttctctccctctctccctc 126028
>gb|AC161005.4| Pan troglodytes BAC clone CH251-668M6 from chromosome 7, complete sequence Length = 217746 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctctccctc 37 |||||||| ||||||||||||||||| Sbjct: 190667 tctttctttctctccctctctccctc 190692
>gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosome 18, complete sequence Length = 193184 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccctc 37 |||||||| ||||||||||||||||| Sbjct: 30148 tctttctttctctccctctctccctc 30123
>gb|AC156987.7| Mus musculus chromosome 7, clone RP23-78K13, complete sequence Length = 231140 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 187974 tcttcctctccctctctccctc 187953
>gb|BT013760.1| Lycopersicon esculentum clone 132643F, mRNA sequence Length = 1725 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 487 gtcttcaaggggtggatcgatgagaa 512 |||||||||||||||||||| ||||| Sbjct: 465 gtcttcaaggggtggatcgaagagaa 490
>gb|AC139553.5| Mus musculus chromosome 19, clone RP24-386E18, complete sequence Length = 168091 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 72346 ctctccctctctccctcgctct 72367 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 72320 ctctccctctctccctcgctct 72341
>gb|AC166370.3| Mus musculus BAC clone RP23-20I24 from chromosome 9, complete sequence Length = 242229 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 233627 tcttcctctccctctctccctc 233648
>gb|AC161829.5| Mus musculus 10 BAC RP23-304K21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196522 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 65687 tcttcctctccctctctccctc 65708
>gb|AC128670.3| Mus musculus BAC clone RP23-137H4 from chromosome 13, complete sequence Length = 173020 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctctccctc 37 ||||||| |||||||||||||||||| Sbjct: 149862 tctttctccctctccctctctccctc 149887
>gb|AC133089.4| Mus musculus BAC clone RP24-165M3 from chromosome 19, complete sequence Length = 149637 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccctc 37 ||||||| |||||||||||||||||| Sbjct: 120734 tctttctccctctccctctctccctc 120709
>gb|AC124600.5| Mus musculus BAC clone RP23-25H7 from chromosome 16, complete sequence Length = 225102 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctctagaa 46 ||||||||||||||||| |||||||| Sbjct: 139234 ctctccctctctccctctctctagaa 139209
>gb|AC123941.3| Mus musculus BAC clone RP23-458G24 from chromosome 19, complete sequence Length = 182733 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 12897 ctctccctctctccctcgctct 12876 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 12871 ctctccctctctccctcgctct 12850
>gb|AC132452.3| Mus musculus BAC clone RP23-195K10 from chromosome 19, complete sequence Length = 218688 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 151919 tcttcctctccctctctccctc 151940
>gb|AC133101.4| Mus musculus BAC clone RP23-154M23 from chromosome 15, complete sequence Length = 206189 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctctc 33 |||||||||||||||||||||| Sbjct: 63034 tctttcttcctctccctctctc 63055
>gb|AC130819.4| Mus musculus BAC clone RP23-118O2 from chromosome 19, complete sequence Length = 223575 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccctc 37 ||||||| |||||||||||||||||| Sbjct: 58995 tctttctccctctccctctctccctc 58970
>gb|AC107755.12| Mus musculus chromosome 9, clone RP23-225C11, complete sequence Length = 178844 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 38628 tcttcctctccctctctccctc 38649
>gb|AC098707.2| Mus musculus BAC clone RP23-1I13 from 18, complete sequence Length = 230128 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 146303 tcttcctctccctctctccctc 146282 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 146268 tcttcctctccctctctccctc 146247 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccct 36 ||||||||||||||||||||| Sbjct: 146227 tcttcctctccctctctccct 146207
>gb|AC006350.2| Homo sapiens PAC clone RP5-998H4 from 7, complete sequence Length = 96958 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccctc 37 |||||||| ||||||||||||||||| Sbjct: 56014 tctttctttctctccctctctccctc 55989
>gb|AC112990.7| Mus musculus chromosome 19, clone RP24-317E20, complete sequence Length = 183322 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 25621 tcttcctctccctctctccctc 25642
>gb|AC034122.12| Mus musculus chromosome 1, clone RP23-169C19, complete sequence Length = 208469 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 13 ctttcttcctctccctctctccctcgctct 42 |||||| |||||||||||||||||| |||| Sbjct: 5847 ctttctccctctccctctctccctctctct 5818
>gb|AC096625.25| Mus musculus strain C57BL/6J clone rp23-388i7 map 1, complete sequence Length = 191415 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 129629 tcttcctctccctctctccctc 129650
>emb|AL732314.18| Human DNA sequence from clone RP13-465B17 on chromosome X Contains the 5' end of the gene for protein phosphatase 2A 48 kDa regulatory subunit (PR48), a fatty acid binding protein 5 (psoriasis-associated) (FABP5) pseudogene, a pseudogene similar to part of keratin 18 (KRT18) and nine CpG islands, complete sequence Length = 218723 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctctc 33 |||||||||||||||||||||| Sbjct: 133691 tctttcttcctctccctctctc 133712
>emb|AL590411.7| Human DNA sequence from clone RP11-237J7 on chromosome 10 Contains two CpG islands, complete sequence Length = 128435 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 103174 tcttcctctccctctctccctc 103195
>emb|AL590304.2| Human DNA sequence from clone RP11-252B20 on chromosome 13 Contains a spermatogenesis associated 2 (SPATA2) pseudogene, complete sequence Length = 116874 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 5392 ctctccctctctccctcgctct 5371
>emb|AL358237.13| Human DNA sequence from clone RP3-407G6 on chromosome 20 Contains part of a novel gene (LOC284757), complete sequence Length = 47850 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctctccctc 37 |||||||||||||||||| ||||||| Sbjct: 33263 tctttcttcctctccctccctccctc 33288
>emb|AL158064.16| Human DNA sequence from clone RP11-470M1 on chromosome 13, complete sequence Length = 160587 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccctc 37 |||||||| ||||||||||||||||| Sbjct: 113020 tctttctttctctccctctctccctc 112995
>gb|AC097265.4| Pan troglodytes BAC RP43-119N13 (Roswell Park Cancer Institute Male Chimpanzee BAC Library) complete sequence Length = 187084 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 gaagcagagggcaggggaggag 74 |||||||||||||||||||||| Sbjct: 43836 gaagcagagggcaggggaggag 43857
>gb|AC162381.7| Mus musculus 10 BAC RP24-528B14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 150712 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 64118 tcttcctctccctctctccctc 64097
>emb|AL662792.21| Mouse DNA sequence from clone RP23-52L14 on chromosome 11, complete sequence Length = 164120 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 89716 tcttcctctccctctctccctc 89695
>emb|AL713921.15| Mouse DNA sequence from clone RP23-475A8 on chromosome 11 Contains a novel gene and a CpG island, complete sequence Length = 214065 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccctc 37 |||||||||| ||||||||||||||| Sbjct: 169464 tctttcttcccctccctctctccctc 169439
>emb|AL713860.12| Mouse DNA sequence from clone RP23-446K18 on chromosome 11 Contains the Ccl8 and Ccl1 genes for chemokine (C-C motif) ligand 8 and 1, complete sequence Length = 129489 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctctccctc 37 |||||||||||||||||| ||||||| Sbjct: 47817 tctttcttcctctccctccctccctc 47842
>gb|AC074029.15| Homo sapiens 12 BAC RP11-474C8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160943 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 ctttcttcctctccctctctcc 34 |||||||||||||||||||||| Sbjct: 79873 ctttcttcctctccctctctcc 79894
>emb|AL596256.14| Mouse DNA sequence from clone RP23-259D24 on chromosome 11, complete sequence Length = 169405 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 ttcttcctctccctctctccct 36 |||||||||||||||||||||| Sbjct: 70190 ttcttcctctccctctctccct 70211
>emb|AL732438.17| Mouse DNA sequence from clone RP23-317K5 on chromosome X, complete sequence Length = 157834 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctctc 33 |||||||||||||||||||||| Sbjct: 28849 tctttcttcctctccctctctc 28870
>gb|AC008737.11| Homo sapiens chromosome 19 clone CTD-2538G9, complete sequence Length = 248281 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 13 ctttcttcctctccctctctccctcgctct 42 ||||||||||||||||| ||||||| |||| Sbjct: 222009 ctttcttcctctccctccctccctccctct 222038
>gb|AC087543.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0068N06, complete sequence Length = 174019 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 130956 ctctccctctctccctcgctct 130935
>gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 genomic sequence, complete sequence Length = 144306 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 100992 ctctccctctctccctcgctct 100971
>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete sequence Length = 178158 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 10165 ctctccctctctccctcgctct 10144
>gb|AC058791.4| Homo sapiens chromosome 7 clone RP11-138A9, complete sequence Length = 164026 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 107581 tcttcctctccctctctccctc 107602
>gb|AC009153.10| Homo sapiens chromosome 16 clone RP11-572F4, complete sequence Length = 177479 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 gaagcagagggcaggggaggag 74 |||||||||||||||||||||| Sbjct: 154594 gaagcagagggcaggggaggag 154573
>gb|AC091784.8| Genomic sequence for Mus musculus, clone RP23-213D23, complete sequence Length = 215410 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 5729 tcttcctctccctctctccctc 5708
>gb|AC060761.10| Mus musculus chromosome 17, clone RP23-218D19, complete sequence Length = 228922 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctctccctc 37 |||||||| ||||||||||||||||| Sbjct: 42026 tctttctttctctccctctctccctc 42051
>emb|BX005480.12| Mouse DNA sequence from clone RP23-142M12 on chromosome X, complete sequence Length = 196326 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 71394 tcttcctctccctctctccctc 71415
>gb|AC135087.5| Mus musculus BAC clone RP23-270H16 from chromosome 1, complete sequence Length = 172385 Score = 44.1 bits (22), Expect = 0.44 Identities = 31/34 (91%) Strand = Plus / Minus Query: 9 aggtctttcttcctctccctctctccctcgctct 42 |||||||||| ||||||||||||||||| |||| Sbjct: 117669 aggtctttctctctctccctctctccctctctct 117636
>gb|AC159254.2| Mus musculus BAC clone RP24-112C23 from chromosome 12, complete sequence Length = 163438 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 152231 tcttcctctccctctctccctc 152252 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ttcctctccctctctccctc 37 |||||||||||||||||||| Sbjct: 152031 ttcctctccctctctccctc 152050
>gb|AC154357.2| Mus musculus BAC clone RP23-192E11 from chromosome 9, complete sequence Length = 195151 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 ttcttcctctccctctctccct 36 |||||||||||||||||||||| Sbjct: 148433 ttcttcctctccctctctccct 148412
>gb|AC160341.2| Mus musculus BAC clone RP24-226P13 from chromosome 9, complete sequence Length = 139613 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 5218 tcttcctctccctctctccctc 5197
>gb|AC123753.7| Mus musculus chromosome 5, clone RP24-200E3, complete sequence Length = 167457 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 92577 tcttcctctccctctctccctc 92556
>gb|AC009053.7| Homo sapiens chromosome 16 clone RP11-252A24, complete sequence Length = 163427 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 gaagcagagggcaggggaggag 74 |||||||||||||||||||||| Sbjct: 65615 gaagcagagggcaggggaggag 65594
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 17231203 ctctccctctctccctcgctct 17231182 Score = 42.1 bits (21), Expect = 1.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 436 acgagaaacttccggccggacagcgtgctaggcgagggagggnttggg 483 ||||| |||||| |||||||||||| || |||||||| ||| ||||| Sbjct: 11825561 acgaggaacttcaagccggacagcgtactcggcgagggtgggtttggg 11825514
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 25135493 ctctccctctctccctcgctct 25135514 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ctccatccccggcggcggct 182 |||||||||||||||||||| Sbjct: 16908107 ctccatccccggcggcggct 16908088
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 22154072 ctctccctctctccctcgctct 22154051 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 2603757 ctctccctctctccctcgctct 2603778
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 22174016 ctctccctctctccctcgctct 22173995
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 4258530 ctctccctctctccctcgctct 4258509 Score = 42.1 bits (21), Expect = 1.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 436 acgagaaacttccggccggacagcgtgctaggcgagggagggnttggg 483 ||||| |||||| |||||||||||| || |||||||| ||| ||||| Sbjct: 26131411 acgaggaacttcaagccggacagcgtactcggcgagggtgggtttggg 26131364
>gb|AC154850.2| Mus musculus BAC clone RP23-36B4 from chromosome 9, complete sequence Length = 247708 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 116123 tcttcctctccctctctccctc 116144
>gb|AC159103.1| Mus musculus BAC clone RP23-424O13 from chromosome 14, complete sequence Length = 195391 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 56613 tcttcctctccctctctccctc 56634
>gb|AC154665.2| Mus musculus BAC clone RP24-284M11 from chromosome 13, complete sequence Length = 185286 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 22197 tcttcctctccctctctccctc 22176
>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete sequence Length = 172427 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 111489 ctctccctctctccctcgctct 111468 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 101382 ctctccctctctccctcgctct 101361
>gb|AC113303.16| Mus musculus chromosome 5, clone RP23-431E5, complete sequence Length = 221109 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 38076 tcttcctctccctctctccctc 38097
>gb|AC004801.2| Homo sapiens 12 PAC RP1-228P16 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 193775 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 13 ctttcttcctctccctctctcc 34 |||||||||||||||||||||| Sbjct: 23008 ctttcttcctctccctctctcc 22987
>dbj|AP003334.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1114B07 Length = 148060 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 28842 ctctccctctctccctcgctct 28821
>gb|AC009060.7|AC009060 Homo sapiens chromosome 16 clone RP11-296I10, complete sequence Length = 180596 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 gaagcagagggcaggggaggag 74 |||||||||||||||||||||| Sbjct: 98101 gaagcagagggcaggggaggag 98080
>gb|AC147220.3| Mus musculus BAC clone RP23-51A20 from chromosome 18, complete sequence Length = 208705 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctctccctc 37 |||||||| ||||||||||||||||| Sbjct: 44130 tctttctttctctccctctctccctc 44155
>gb|AC142113.2| Mus musculus BAC clone RP23-444K20 from chromosome 9, complete sequence Length = 188724 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 127028 tcttcctctccctctctccctc 127007
>dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1027_G06 Length = 121885 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 29475 ctctccctctctccctcgctct 29496
>dbj|AP004838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0504A05 Length = 148360 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 75344 ctctccctctctccctcgctct 75323
>dbj|AP005658.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0620D11 Length = 140245 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 91315 ctctccctctctccctcgctct 91294
>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0037C04 Length = 137879 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 70347 ctctccctctctccctcgctct 70326
>dbj|AP006057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1342C04 Length = 172097 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 171960 ctctccctctctccctcgctct 171939
>dbj|AP005891.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1045B05 Length = 140992 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 18075 ctctccctctctccctcgctct 18054
>dbj|AP005125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0058I18 Length = 151453 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 107728 ctctccctctctccctcgctct 107707
>dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1168A08 Length = 138135 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 616 ctctccctctctccctcgctct 637
>dbj|AP005254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0064I19 Length = 111644 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 39668 ctctccctctctccctcgctct 39689
>gb|AC016831.1|AC016831 Homo sapiens clone RP11-36B6 from 7q31, complete sequence Length = 192768 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 191865 tcttcctctccctctctccctc 191844
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 317 gggcggccttgagcagctccagcagc 342 |||||||||||||| ||||||||||| Sbjct: 4855154 gggcggccttgagctgctccagcagc 4855129
>gb|AC101783.12| Mus musculus chromosome 1, clone RP24-136B19, complete sequence Length = 169909 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 20281 tcttcctctccctctctccctc 20260
>gb|AC099719.9| Mus musculus chromosome 7, clone RP23-394F19, complete sequence Length = 215718 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 106272 tcttcctctccctctctccctc 106293
>gb|AC102268.11| Mus musculus chromosome 18, clone RP24-248J13, complete sequence Length = 164012 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 71324 tcttcctctccctctctccctc 71345
>gb|DQ116631.1| Hemibagrus nemurus clone MnBp5-2-21 microsatellite sequences Length = 266 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccctc 37 |||||||||||||| ||||||||||| Sbjct: 178 tctttcttcctctctctctctccctc 153
>emb|BX005233.10| Mouse DNA sequence from clone RP23-214I11 on chromosome X, complete sequence Length = 189118 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 tttcttcctctccctctctccc 35 |||||||||||||||||||||| Sbjct: 106273 tttcttcctctccctctctccc 106252
>gb|AC154215.1| Mus musculus BAC clone RP24-134E18 from 13, complete sequence Length = 171014 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 110253 tcttcctctccctctctccctc 110232
>emb|CT009699.13| Mouse DNA sequence from clone RP23-119C14 on chromosome 9, complete sequence Length = 192913 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 59419 tcttcctctccctctctccctc 59398
>gb|AC144632.4| Mus musculus BAC clone RP23-106G16 from chromosome 15, complete sequence Length = 206265 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctc 33 |||||||||||||||||||||| Sbjct: 24242 tctttcttcctctccctctctc 24221
>emb|AL928843.9| Zebrafish DNA sequence from clone DKEY-7P8 in linkage group 7, complete sequence Length = 179577 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctctc 33 |||||||||||||||||||||| Sbjct: 143083 tctttcttcctctccctctctc 143104
>gb|AC159884.2| Mus musculus BAC clone RP24-416O24 from chromosome 9, complete sequence Length = 219361 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 47095 tcttcctctccctctctccctc 47074
>emb|AL670169.9| Mouse DNA sequence from clone RP23-198C2 on chromosome X, complete sequence Length = 151698 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 13 ctttcttcctctccctctctccctcgctct 42 |||||||||||||||||| |||||| |||| Sbjct: 60504 ctttcttcctctccctctgtccctccctct 60475
>emb|AL683816.6| Mouse DNA sequence from clone RP23-120E8 on chromosome 4, complete sequence Length = 216639 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 ctttcttcctctccctctctcc 34 |||||||||||||||||||||| Sbjct: 200108 ctttcttcctctccctctctcc 200129
>emb|AL732396.11| Mouse DNA sequence from clone RP23-93M14 on chromosome X, complete sequence Length = 173254 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctctc 33 |||||||||||||||||||||| Sbjct: 18924 tctttcttcctctccctctctc 18945
>emb|AL670771.6| Mouse DNA sequence from clone RP23-256C8 on chromosome X, complete sequence Length = 219340 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccctc 37 |||||||||||||||||||||| Sbjct: 83804 tcttcctctccctctctccctc 83783
>emb|AL713839.1|CNS07YOT Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 149H13 of library Caltech CITB-BAC from chromosome 11 of Mus musculus (mouse) Length = 240425 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctctccctc 37 |||||||||||||||||| ||||||| Sbjct: 191239 tctttcttcctctccctccctccctc 191264
>emb|AL808143.5| Mouse DNA sequence from clone RP23-384K11 on chromosome 2, complete sequence Length = 202474 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 13 ctttcttcctctccctctctccctcgctct 42 ||||||||||||| ||||||||||| |||| Sbjct: 10844 ctttcttcctctctctctctccctctctct 10873
>emb|AL645524.8| Mouse DNA sequence from clone RP23-35D7 on chromosome 11, complete sequence Length = 210163 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 ctttcttcctctccctctctcc 34 |||||||||||||||||||||| Sbjct: 98566 ctttcttcctctccctctctcc 98587
>emb|AL732459.5| Mouse DNA sequence from clone RP23-115J4 on chromosome X, complete sequence Length = 201897 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccctc 37 |||||||| ||||||||||||||||| Sbjct: 118605 tctttctttctctccctctctccctc 118580
>emb|AL607034.16| Mouse DNA sequence from clone RP23-303K9 on chromosome 11, complete sequence Length = 143148 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccctc 37 |||||||||||||||||| ||||||| Sbjct: 33408 tctttcttcctctccctccctccctc 33383
>dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0044F08 Length = 141528 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctct 42 |||||||||||||||||||||| Sbjct: 21917 ctctccctctctccctcgctct 21896
>gb|BT020520.1| Arabidopsis thaliana At1g69790 gene, complete cds Length = 1164 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 403 aaggcctttaccttcaatgagctaaggaccgccacgagaaacttc 447 ||||||||||| ||||| ||||||| ||||| || ||||||||| Sbjct: 208 aaggcctttacattcaacgagctaaaaaccgctactagaaacttc 252
>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence Length = 491611 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 ccatccccggcggcggctcga 185 ||||||||||||||||||||| Sbjct: 174523 ccatccccggcggcggctcga 174503
>ref|NM_105647.3| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT1G69790 mRNA, complete cds Length = 1408 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 403 aaggcctttaccttcaatgagctaaggaccgccacgagaaacttc 447 ||||||||||| ||||| ||||||| ||||| || ||||||||| Sbjct: 287 aaggcctttacattcaacgagctaaaaaccgctactagaaacttc 331
>gb|AC151770.1| Ornithorhynchus anatinus chromosome UNK clone OABb-325A1, complete sequence Length = 114581 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctctccct 36 ||||||| ||||||||||||||||| Sbjct: 28093 tctttctgcctctccctctctccct 28117
>gb|AC166050.3| Mus musculus BAC clone RP24-138A17 from chromosome 9, complete sequence Length = 142457 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 tctccctctctccctcgctct 42 ||||||||||||||||||||| Sbjct: 68776 tctccctctctccctcgctct 68796
>ref|XM_467051.1| Oryza sativa (japonica cultivar-group), mRNA Length = 591 Score = 42.1 bits (21), Expect = 1.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 436 acgagaaacttccggccggacagcgtgctaggcgagggagggnttggg 483 ||||| |||||| |||||||||||| || |||||||| ||| ||||| Sbjct: 249 acgaggaacttcaagccggacagcgtactcggcgagggtgggtttggg 296
>ref|XM_450617.1| Oryza sativa (japonica cultivar-group), mRNA Length = 426 Score = 42.1 bits (21), Expect = 1.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 436 acgagaaacttccggccggacagcgtgctaggcgagggagggnttggg 483 ||||| |||||| |||||||||||| || |||||||| ||| ||||| Sbjct: 129 acgaggaacttcaagccggacagcgtactcggcgagggtgggtttggg 82
>gb|AC108777.7| Mus musculus chromosome 18, clone RP23-368H22, complete sequence Length = 216024 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 18 ttcctctccctctctccctcgctct 42 |||||||||||||||||||| |||| Sbjct: 109054 ttcctctccctctctccctccctct 109030 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 15 ttcttcctctccctctctccctcgctct 42 ||||||||||| ||||||||||| |||| Sbjct: 168393 ttcttcctctctctctctccctctctct 168366
>gb|AC166913.3| Mus musculus chromosome 3, clone wi1-1667I10, complete sequence Length = 39719 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 15 ttcttcctctccctctctccctcgctcta 43 |||| |||||||||||||||||| ||||| Sbjct: 6567 ttctccctctccctctctccctccctcta 6539
>gb|BT015737.1| Arabidopsis thaliana At1g69790 mRNA, complete cds Length = 1371 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 403 aaggcctttaccttcaatgagctaaggaccgccacgagaaacttc 447 ||||||||||| ||||| ||||||| ||||| || ||||||||| Sbjct: 267 aaggcctttacattcaacgagctaaaaaccgctactagaaacttc 311
>gb|AY426339.1| Argiope trifasciata aciniform spidroin 1 mRNA, partial cds Length = 8618 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 tctagaagcagcagaagcaga 60 ||||||||||||||||||||| Sbjct: 8238 tctagaagcagcagaagcaga 8218
>gb|AC125643.3| Rattus norvegicus 4 BAC CH230-55N7 (Children's Hospital Oakland Research Institute) complete sequence Length = 216677 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 cagaagcagagggcaggggag 71 ||||||||||||||||||||| Sbjct: 4713 cagaagcagagggcaggggag 4733
>ref|XM_849137.1| PREDICTED: Canis familiaris similar to Adapter-related protein complex 1 sigma 1B subunit (Sigma-adaptin 1B) (Adaptor protein complex AP-1 sigma-1B subunit) (Golgi adaptor HA1/AP1 adaptin sigma-1B subunit) (Clathrin assembly protein complex 1 sigma-1B small chain) (Sigma 1B s... (LOC611468), mRNA Length = 1520 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 cgatcctgccctgccctgccc 219 ||||||||||||||||||||| Sbjct: 110 cgatcctgccctgccctgccc 130
>gb|AC118545.20| Mus musculus strain C57BL/6J clone rp23-324o14 map 17, complete sequence Length = 236365 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccct 36 ||||||||||||||||||||| Sbjct: 187117 tcttcctctccctctctccct 187097
>emb|CT025652.7| Mouse DNA sequence from clone RP24-68J3 on chromosome 17, complete sequence Length = 226856 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctc 41 ||||||||||||||||||||| Sbjct: 89479 ctctccctctctccctcgctc 89459
>emb|CT010441.11| Mouse DNA sequence from clone CH29-521N19 on chromosome 17, complete sequence Length = 235642 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctc 41 ||||||||||||||||||||| Sbjct: 193337 ctctccctctctccctcgctc 193317
>gb|AC113307.12| Mus musculus chromosome 3, clone RP23-437A2, complete sequence Length = 202835 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 15 ttcttcctctccctctctccctcgctcta 43 |||| |||||||||||||||||| ||||| Sbjct: 191418 ttctccctctccctctctccctccctcta 191390
>gb|AC123026.4| Mus musculus BAC clone RP24-549O22 from chromosome 3, complete sequence Length = 175610 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctctccct 36 |||||||||||||||||| |||||| Sbjct: 77118 tctttcttcctctccctccctccct 77142
>gb|AC121889.3| Mus musculus BAC clone RP24-146D9 from chromosome 1, complete sequence Length = 160207 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 tcttcctctccctctctccct 36 ||||||||||||||||||||| Sbjct: 90626 tcttcctctccctctctccct 90646
>gb|AC104897.7| Mus musculus chromosome 12, clone RP23-300E12, complete sequence Length = 194600 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 cttcctctccctctctccctc 37 ||||||||||||||||||||| Sbjct: 175881 cttcctctccctctctccctc 175901
>gb|AC166572.1| Mus musculus BAC clone RP23-346L20 from chromosome 16, complete sequence Length = 183111 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctct 32 ||||||||||||||||||||| Sbjct: 125091 tctttcttcctctccctctct 125071
>gb|AC118590.11| Mus musculus chromosome 15, clone RP24-506N7, complete sequence Length = 155519 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 cttcctctccctctctccctc 37 ||||||||||||||||||||| Sbjct: 127729 cttcctctccctctctccctc 127749
>gb|AC097752.7| Rattus norvegicus 1 BAC CH230-75H6 (Children's Hospital Oakland Research Institute) complete sequence Length = 245907 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 cttcctctccctctctccctc 37 ||||||||||||||||||||| Sbjct: 195472 cttcctctccctctctccctc 195452
>emb|CR381640.8| Human DNA sequence from clone RP13-854E9 on chromosome X, complete sequence Length = 63682 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 ctttcttcctctccctctctccctc 37 ||||||||||||| ||||||||||| Sbjct: 25855 ctttcttcctctctctctctccctc 25879 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 ctttcttcctctccctctctccct 36 ||||||||||||| |||||||||| Sbjct: 24558 ctttcttcctctctctctctccct 24581
>gb|AC161207.4| Mus musculus chromosome 1, clone RP23-66G23, complete sequence Length = 197037 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccct 36 ||||||||||||||||||||| Sbjct: 166345 tcttcctctccctctctccct 166325
>gb|AC099466.7| Rattus norvegicus 4 BAC CH230-63I9 (Children's Hospital Oakland Research Institute) complete sequence Length = 227298 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 cagaagcagagggcaggggag 71 ||||||||||||||||||||| Sbjct: 101654 cagaagcagagggcaggggag 101674
>gb|AC159656.11| Mus musculus 6 BAC RP24-85F2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 205702 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 cttcctctccctctctccctc 37 ||||||||||||||||||||| Sbjct: 105605 cttcctctccctctctccctc 105625
>gb|AC092910.9| Homo sapiens 3 BAC RP11-767L7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178311 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 tttcttcctctccctctctccctcg 38 |||||||||||| |||||||||||| Sbjct: 31934 tttcttcctctctctctctccctcg 31958
>emb|BX004859.8| Human DNA sequence from clone RP13-468P17 on chromosome X, complete sequence Length = 63432 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 ctttcttcctctccctctctccctc 37 ||||||||||||| ||||||||||| Sbjct: 26477 ctttcttcctctctctctctccctc 26501 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 ctttcttcctctccctctctccct 36 ||||||||||||| |||||||||| Sbjct: 25475 ctttcttcctctctctctctccct 25498
>gb|AC116529.16| Mus musculus chromosome 8, clone RP24-380O18, complete sequence Length = 166863 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 ctctccctctctccctcgctc 41 ||||||||||||||||||||| Sbjct: 47200 ctctccctctctccctcgctc 47220
>gb|AC078856.13| Homo sapiens 3 BAC RP11-73F12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 115534 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 tttcttcctctccctctctccctcg 38 |||||||||||| |||||||||||| Sbjct: 24889 tttcttcctctctctctctccctcg 24865
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 tctccctctctccctcgctct 42 ||||||||||||||||||||| Sbjct: 2087913 tctccctctctccctcgctct 2087893
>gb|AC164624.3| Mus musculus 10 BAC RP24-324P5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 199853 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 14 tttcttcctctccctctctccctcgctct 42 ||||| |||||||||||||||||| |||| Sbjct: 179396 tttctccctctccctctctccctctctct 179424
>dbj|AK136986.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430027F23 product:unclassifiable, full insert sequence Length = 3831 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccct 36 |||||||||||||||||| |||||| Sbjct: 3647 tctttcttcctctccctccctccct 3623
>gb|AC105391.1| Homo sapiens BAC clone RP11-311D14 from 4, complete sequence Length = 143498 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 tcttcctctccctctctccct 36 ||||||||||||||||||||| Sbjct: 60920 tcttcctctccctctctccct 60940
>gb|DQ403916.1| Brassica rapa subsp. chinensis clone P54-4 microsatellite sequence Length = 288 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 14 tttcttcctctccctctctccctcgctct 42 |||||||||||| ||||||||||| |||| Sbjct: 42 tttcttcctctctctctctccctctctct 14
>gb|AC090226.3| Homo sapiens chromosome 18, clone RP11-723D20, complete sequence Length = 173602 Score = 42.1 bits (21), Expect = 1.8 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccctcgct 40 |||||||||| |||||||||||||||||| Sbjct: 136437 tctttcttcc-ctccctctctccctcgct 136410
>emb|BX813317.11| Mouse DNA sequence from clone RP24-297H17 on chromosome 2, complete sequence Length = 157571 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccct 36 ||||||||||||||||||||| Sbjct: 122380 tcttcctctccctctctccct 122360
>gb|AC008483.7| Homo sapiens chromosome 5 clone CTC-406I6, complete sequence Length = 152533 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 ctttcttcctctccctctctccctc 37 |||||||||||||||||| |||||| Sbjct: 16283 ctttcttcctctccctctgtccctc 16307
>gb|AC160108.2| Mus musculus BAC clone RP24-155K11 from chromosome 13, complete sequence Length = 168567 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 ctctccctctctccctcgctc 41 ||||||||||||||||||||| Sbjct: 7979 ctctccctctctccctcgctc 7999
>gb|AC159621.2| Mus musculus BAC clone RP24-342I9 from chromosome 12, complete sequence Length = 178350 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 15 ttcttcctctccctctctccctcgctcta 43 |||||| |||||||||||||||| ||||| Sbjct: 16822 ttcttcttctccctctctccctctctcta 16794
>gb|AC022001.5| Homo sapiens chromosome 3 clone RP11-169K17 map 3p, complete sequence Length = 164607 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccct 36 |||||||||||||| |||||||||| Sbjct: 73808 tctttcttcctctctctctctccct 73784
>dbj|AK049684.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530024L22 product:unclassifiable, full insert sequence Length = 3760 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctct 32 ||||||||||||||||||||| Sbjct: 3250 tctttcttcctctccctctct 3270
>gb|AC018494.6|AC018494 Homo sapiens chromosome 3 clone RP11-16M3 map 3p, complete sequence Length = 174612 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctctccct 36 |||||||||||||| |||||||||| Sbjct: 159339 tctttcttcctctctctctctccct 159363
>gb|AC018811.4|AC018811 Homo sapiens chromosome 3 clone RP11-13B4 map 3p, complete sequence Length = 177834 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccct 36 |||||||||||||| |||||||||| Sbjct: 55444 tctttcttcctctctctctctccct 55420
>emb|BX816326.1|CNS0ABST Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH41ZB01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1398 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 403 aaggcctttaccttcaatgagctaaggaccgccacgagaaacttc 447 ||||||||||| ||||| ||||||| ||||| || ||||||||| Sbjct: 286 aaggcctttacattcaacgagctaaaaaccgctactagaaacttc 330
>emb|BX815392.1|CNS0ABFA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS57ZB09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1377 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 403 aaggcctttaccttcaatgagctaaggaccgccacgagaaacttc 447 ||||||||||| ||||| ||||||| ||||| || ||||||||| Sbjct: 287 aaggcctttacattcaacgagctaaaaaccgctactagaaacttc 331
>gb|AC087565.5| Homo sapiens chromosome 16 clone RP11-53L24, complete sequence Length = 192937 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 cttcctctccctctctccctc 37 ||||||||||||||||||||| Sbjct: 123542 cttcctctccctctctccctc 123522
>gb|AC157089.5| Mus musculus 10 BAC RP24-339G14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 160723 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 ctttcttcctctccctctctccctc 37 ||||||||||||||||| ||||||| Sbjct: 74043 ctttcttcctctccctccctccctc 74067
>gb|AC013289.11|AC013289 Arabidopsis thaliana chromosome 1 BAC T6C23 genomic sequence, complete sequence Length = 87148 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 403 aaggcctttaccttcaatgagctaaggaccgccacgagaaacttc 447 ||||||||||| ||||| ||||||| ||||| || ||||||||| Sbjct: 3679 aaggcctttacattcaacgagctaaaaaccgctactagaaacttc 3635
>gb|AC008397.7|AC008397 Homo sapiens chromosome 19 clone CTC-251H24, complete sequence Length = 209519 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 gtctttcttcctctccctctc 31 ||||||||||||||||||||| Sbjct: 116259 gtctttcttcctctccctctc 116279
>gb|AC022201.4| Homo sapiens BAC clone RP11-245N4 from 2, complete sequence Length = 139833 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 ctgccctgccctgcccatggg 224 ||||||||||||||||||||| Sbjct: 35414 ctgccctgccctgcccatggg 35434
>gb|AC010423.8| Homo sapiens chromosome 5 clone CTD-2193G5, complete sequence Length = 183787 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 13 ctttcttcctctccctctctccctc 37 |||||||||||||||||| |||||| Sbjct: 78411 ctttcttcctctccctctgtccctc 78387
>gb|AC146612.2| Mus musculus BAC clone RP23-56K8 from chromosome 5, complete sequence Length = 167356 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccct 36 |||||||||||||||||| |||||| Sbjct: 24351 tctttcttcctctccctccctccct 24327
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 42.1 bits (21), Expect = 1.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 436 acgagaaacttccggccggacagcgtgctaggcgagggagggnttggg 483 ||||| |||||| |||||||||||| || |||||||| ||| ||||| Sbjct: 7051 acgaggaacttcaagccggacagcgtactcggcgagggtgggtttggg 7004
>dbj|AP004868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0048B08 Length = 146874 Score = 42.1 bits (21), Expect = 1.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 436 acgagaaacttccggccggacagcgtgctaggcgagggagggnttggg 483 ||||| |||||| |||||||||||| || |||||||| ||| ||||| Sbjct: 28238 acgaggaacttcaagccggacagcgtactcggcgagggtgggtttggg 28191
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 42.1 bits (21), Expect = 1.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 436 acgagaaacttccggccggacagcgtgctaggcgagggagggnttggg 483 ||||| |||||| |||||||||||| || |||||||| ||| ||||| Sbjct: 138857 acgaggaacttcaagccggacagcgtactcggcgagggtgggtttggg 138810
>dbj|AP005572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1506_A04 Length = 114998 Score = 42.1 bits (21), Expect = 1.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 436 acgagaaacttccggccggacagcgtgctaggcgagggagggnttggg 483 ||||| |||||| |||||||||||| || |||||||| ||| ||||| Sbjct: 68379 acgaggaacttcaagccggacagcgtactcggcgagggtgggtttggg 68332
>emb|BX005073.7| Zebrafish DNA sequence from clone CH211-129N18, complete sequence Length = 185849 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 14 tttcttcctctccctctctccctcgctct 42 |||||||||||| ||||||||||| |||| Sbjct: 182557 tttcttcctctctctctctccctctctct 182585
>emb|AL772303.11| Mouse DNA sequence from clone RP23-185P20 on chromosome 2, complete sequence Length = 202001 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 cttcctctccctctctccctc 37 ||||||||||||||||||||| Sbjct: 119440 cttcctctccctctctccctc 119460
>gb|AC107666.13| Mus musculus chromosome 5, clone RP23-111M3, complete sequence Length = 230189 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccct 36 ||||||||||||||||||||| Sbjct: 228012 tcttcctctccctctctccct 227992
>gb|AC153816.4| Mus musculus BAC RP23-8N6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217283 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 14 tttcttcctctccctctctccctcgctct 42 ||||| |||||||||||||||||| |||| Sbjct: 51220 tttctccctctccctctctccctctctct 51248
>emb|AL162551.4|CNS01RHW Human chromosome 14 DNA sequence BAC R-479H16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 182960 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctct 32 ||||||||||||||||||||| Sbjct: 73625 tctttcttcctctccctctct 73645
>emb|AL121576.5|CNS01DRW Human chromosome 14 DNA sequence BAC R-476J6 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 221004 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 tctttcttcctctccctctct 32 ||||||||||||||||||||| Sbjct: 33099 tctttcttcctctccctctct 33119
>gb|AF098462.1|AF098462 Homo sapiens stanniocalcin-related protein mRNA, complete cds Length = 2380 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 14 tttcttcctctccctctctccctcgctct 42 |||||||||||||||||||| ||| |||| Sbjct: 2354 tttcttcctctccctctctctctctctct 2326
>gb|AC100745.8| Mus musculus chromosome 15, clone RP24-372F6, complete sequence Length = 168891 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 cttcctctccctctctccctc 37 ||||||||||||||||||||| Sbjct: 9901 cttcctctccctctctccctc 9921
>gb|AC148053.3| Carollia perspicillata clone 594J14, complete sequence Length = 125844 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 14 tttcttcctctccctctctccctcgctct 42 ||||| |||||||||||||||||| |||| Sbjct: 95683 tttctccctctccctctctccctctctct 95655
>gb|AC114589.30| Mus musculus chromosome 8, clone RP23-365O13, complete sequence Length = 213866 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ctctccctctctccctcgctc 41 ||||||||||||||||||||| Sbjct: 484 ctctccctctctccctcgctc 464
>dbj|AB104035.1| Equus caballus DNA, microsatellite TKY817 Length = 228 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tttcttcctctccctctctcc 34 ||||||||||||||||||||| Sbjct: 158 tttcttcctctccctctctcc 138
>dbj|AP001360.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-831A10, complete sequence Length = 190766 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 gtctttcttcctctccctctctccc 35 |||||||| |||||||||||||||| Sbjct: 90412 gtctttctccctctccctctctccc 90436
>gb|AC091484.8| Mus musculus strain C57BL/6J chromosome 17 clone rp23-386a1, complete sequence Length = 205343 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 tcttcctctccctctctccct 36 ||||||||||||||||||||| Sbjct: 81128 tcttcctctccctctctccct 81108
>gb|AC107856.7| Mus musculus chromosome 14, clone RP23-10E23, complete sequence Length = 203953 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctct 32 ||||||||||||||||||||| Sbjct: 53630 tctttcttcctctccctctct 53610
>emb|CT030682.10| Mouse DNA sequence from clone RP23-263O11 on chromosome 14, complete sequence Length = 144072 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctct 32 ||||||||||||||||||||| Sbjct: 65345 tctttcttcctctccctctct 65325
>gb|AC132397.4| Mus musculus BAC clone RP23-397C5 from 5, complete sequence Length = 212387 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 tctttcttcctctccctctctccct 36 |||||||||||||||||| |||||| Sbjct: 143985 tctttcttcctctccctccctccct 143961
>emb|CR974580.6| Mouse DNA sequence from clone RP23-97P6 on chromosome 12, complete sequence Length = 197896 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 cttcctctccctctctccctc 37 ||||||||||||||||||||| Sbjct: 43026 cttcctctccctctctccctc 43006
>emb|CT025678.6| Mouse DNA sequence from clone RP24-153A6 on chromosome 9, complete sequence Length = 175790 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 tctccctctctccctcgctct 42 ||||||||||||||||||||| Sbjct: 61847 tctccctctctccctcgctct 61867
>gb|AC166175.2| Mus musculus BAC clone RP23-53H1 from chromosome 9, complete sequence Length = 264591 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 ctttcttcctctccctctctccctc 37 ||||||||||||| ||||||||||| Sbjct: 45329 ctttcttcctctctctctctccctc 45353
>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold Length = 1501503 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 14 tttcttcctctccctctctccctcgctct 42 ||||| |||||||||||||||||| |||| Sbjct: 1147901 tttctccctctccctctctccctctctct 1147873
>gb|AC171202.1| Mus musculus BAC clone RP24-288C12 from chromosome 16, complete sequence Length = 194527 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 cttcctctccctctctccctc 37 ||||||||||||||||||||| Sbjct: 143067 cttcctctccctctctccctc 143047
>emb|AL928801.6| Mouse DNA sequence from clone RP23-116P4 on chromosome 2, complete sequence Length = 132674 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 cttcctctccctctctccctc 37 ||||||||||||||||||||| Sbjct: 74877 cttcctctccctctctccctc 74897
>emb|AL626775.11| Mouse DNA sequence from clone RP23-325M14 on chromosome 4, complete sequence Length = 190641 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 cttcctctccctctctccctc 37 ||||||||||||||||||||| Sbjct: 151454 cttcctctccctctctccctc 151474
>emb|AL663068.12| Mouse DNA sequence from clone RP23-30J5 on chromosome X, complete sequence Length = 225435 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ttcttcctctccctctctccc 35 ||||||||||||||||||||| Sbjct: 94798 ttcttcctctccctctctccc 94778
>emb|AL808103.8| Mouse DNA sequence from clone RP23-301G2 on chromosome 4, complete sequence Length = 232070 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 cttcctctccctctctccctc 37 ||||||||||||||||||||| Sbjct: 166702 cttcctctccctctctccctc 166682
>gb|AC101277.16| Mus musculus chromosome 1, clone RP23-101P2, complete sequence Length = 207021 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tcttcctctccctctctccc 35 |||||||||||||||||||| Sbjct: 30368 tcttcctctccctctctccc 30387
>gb|BC076684.1| Xenopus tropicalis sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F, mRNA (cDNA clone MGC:79683 IMAGE:6980726), complete cds Length = 3416 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agaagcagcagaagcagagg 62 |||||||||||||||||||| Sbjct: 305 agaagcagcagaagcagagg 286 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,151,007 Number of Sequences: 3902068 Number of extensions: 4151007 Number of successful extensions: 203720 Number of sequences better than 10.0: 477 Number of HSP's better than 10.0 without gapping: 489 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 198288 Number of HSP's gapped (non-prelim): 5436 length of query: 514 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 491 effective length of database: 17,143,297,704 effective search space: 8417359172664 effective search space used: 8417359172664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
