ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd27f13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_477264.1| Oryza sativa (japonica cultivar-group), mRNA 168 1e-38
2dbj|AK068864.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 1e-38
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
4dbj|AP006266.3| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
5dbj|AP004344.3| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
6ref|XM_755964.1| Ustilago maydis 521 hypothetical protein (UM049... 44 0.42
7emb|AL353637.21| Human DNA sequence from clone RP11-159H20 on ch... 42 1.7
8ref|NM_136209.2| Drosophila melanogaster CG9318-RA (CG9318), mRNA 42 1.7
9gb|AY069665.1| Drosophila melanogaster LD44273 full length cDNA 42 1.7
10gb|AC093047.1| Drosophila melanogaster, chromosome 2L, region 38... 42 1.7
11dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
12gb|AC007467.4|AC007467 Drosophila melanogaster, chromosome 2L, r... 42 1.7
13dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
14dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
15gb|AE003667.3| Drosophila melanogaster chromosome 2L, section 76... 42 1.7
16gb|AC004759.1|AC004759 Drosophila melanogaster DNA sequence (P1s... 42 1.7
17gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 6.5
18gb|AC159963.7| Mus musculus chromosome 15, clone RP23-338F23, co... 40 6.5
19gb|DQ447649.1| Lake Victoria marburgvirus - Ravn, complete genome 40 6.5
20emb|AL591408.19| Human DNA sequence from clone RP11-792D24 on ch... 40 6.5
21ref|XM_501810.1| Yarrowia lipolytica CLIB122, YALI0C13904g predi... 40 6.5
22emb|AL606724.17| Mouse DNA sequence from clone RP23-285D3 on chr... 40 6.5
23gb|AC022780.19| Mus musculus chromosome 11, clone RP23-179C3, co... 40 6.5
24gb|AC092169.4| Homo sapiens BAC clone RP11-791I11 from 2, comple... 40 6.5
25gb|AC012499.8| Homo sapiens BAC clone RP11-428I14 from 2, comple... 40 6.5
26gb|AC013440.7| Homo sapiens BAC clone RP11-292A20 from 2, comple... 40 6.5
27dbj|AK115591.1| Ciona intestinalis cDNA, clone:cilv005o09, full ... 40 6.5
28gb|AC141469.4| Mus musculus BAC clone RP24-439P5 from 5, complet... 40 6.5
29emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 40 6.5 
>ref|XM_477264.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1394

 Score =  168 bits (85), Expect = 1e-38
 Identities = 145/165 (87%)
 Strand = Plus / Plus

                                                                       
Query: 320 gacagatggaatggacactcgtccatataggcttagctggccaaggatgtctatcgtgta 379
           |||||||||||||||||||||||| || ||||| |||||||||||| ||||| | |||||
Sbjct: 484 gacagatggaatggacactcgtccttacaggctaagctggccaaggttgtctgttgtgta 543

                                                                       
Query: 380 cgatgtatcacctggaagaatcttcagtacagcagcccagcaactcagaggagcaggagc 439
            |||||||||||| ||||| |||||| ||| ||| | ||||||||||||||||| |||||
Sbjct: 544 tgatgtatcacctagaagagtcttcattactgcatcacagcaactcagaggagccggagc 603

                                                        
Query: 440 aaaaatatcgcggaactgtgttctgtttcatactcctttagagtc 484
           ||||||||| |||||||||||| |  |||||||| ||| ||||||
Sbjct: 604 aaaaatatcacggaactgtgttgtacttcatacttcttcagagtc 648



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Plus

                                                               
Query: 149 atcccctttttattgatccatatgctgctgtgctactttcacttgatgtggc 200
           |||| ||||||||||| |||||||| ||||| ||||||||||||||||||||
Sbjct: 297 atcctctttttattgacccatatgcagctgttctactttcacttgatgtggc 348



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 80/96 (83%)
 Strand = Plus / Plus

                                                                       
Query: 231 tttaatgccatctgcagatcattataggctaactactagatatcttgatgagaaactgca 290
           ||||||||||  |||||| ||||||||||||   || |||||| ||||||| ||| ||||
Sbjct: 379 tttaatgccaagtgcagaacattataggctagtgaccagatatattgatgacaaattgca 438

                                               
Query: 291 acatttgataagcaggtcagacaattttagacagat 326
           |||||| |||||||  |||||  || ||||||||||
Sbjct: 439 acatttcataagcaattcagatgatcttagacagat 474
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>dbj|AK068864.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170O10, full
           insert sequence
          Length = 1387

 Score =  168 bits (85), Expect = 1e-38
 Identities = 145/165 (87%)
 Strand = Plus / Plus

                                                                       
Query: 320 gacagatggaatggacactcgtccatataggcttagctggccaaggatgtctatcgtgta 379
           |||||||||||||||||||||||| || ||||| |||||||||||| ||||| | |||||
Sbjct: 483 gacagatggaatggacactcgtccttacaggctaagctggccaaggttgtctgttgtgta 542

                                                                       
Query: 380 cgatgtatcacctggaagaatcttcagtacagcagcccagcaactcagaggagcaggagc 439
            |||||||||||| ||||| |||||| ||| ||| | ||||||||||||||||| |||||
Sbjct: 543 tgatgtatcacctagaagagtcttcattactgcatcacagcaactcagaggagccggagc 602

                                                        
Query: 440 aaaaatatcgcggaactgtgttctgtttcatactcctttagagtc 484
           ||||||||| |||||||||||| |  |||||||| ||| ||||||
Sbjct: 603 aaaaatatcacggaactgtgttgtacttcatacttcttcagagtc 647



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Plus

                                                               
Query: 149 atcccctttttattgatccatatgctgctgtgctactttcacttgatgtggc 200
           |||| ||||||||||| |||||||| ||||| ||||||||||||||||||||
Sbjct: 296 atcctctttttattgacccatatgcagctgttctactttcacttgatgtggc 347



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 80/96 (83%)
 Strand = Plus / Plus

                                                                       
Query: 231 tttaatgccatctgcagatcattataggctaactactagatatcttgatgagaaactgca 290
           ||||||||||  |||||| ||||||||||||   || |||||| ||||||| ||| ||||
Sbjct: 378 tttaatgccaagtgcagaacattataggctagtgaccagatatattgatgacaaattgca 437

                                               
Query: 291 acatttgataagcaggtcagacaattttagacagat 326
           |||||| |||||||  |||||  || ||||||||||
Sbjct: 438 acatttcataagcaattcagatgatcttagacagat 473
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  117 bits (59), Expect = 3e-23
 Identities = 98/111 (88%)
 Strand = Plus / Plus

                                                                           
Query: 320     gacagatggaatggacactcgtccatataggcttagctggccaaggatgtctatcgtgta 379
               |||||||||||||||||||||||| || ||||| |||||||||||| ||||| | |||||
Sbjct: 8227377 gacagatggaatggacactcgtccttacaggctaagctggccaaggttgtctgttgtgta 8227436

                                                                  
Query: 380     cgatgtatcacctggaagaatcttcagtacagcagcccagcaactcagagg 430
                |||||||||||| ||||| |||||| ||| ||| | ||||||||||||||
Sbjct: 8227437 tgatgtatcacctagaagagtcttcattactgcatcacagcaactcagagg 8227487



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Plus

                                                                   
Query: 149     atcccctttttattgatccatatgctgctgtgctactttcacttgatgtggc 200
               |||| ||||||||||| |||||||| ||||| ||||||||||||||||||||
Sbjct: 8227116 atcctctttttattgacccatatgcagctgttctactttcacttgatgtggc 8227167



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                           
Query: 231     tttaatgccatctgcagatcattataggctaactactagatatcttgatgagaaactgca 290
               ||||||||||  |||||| ||||||||||||   || |||||| ||||||| ||| ||||
Sbjct: 8227198 tttaatgccaagtgcagaacattataggctagtgaccagatatattgatgacaaattgca 8227257

                             
Query: 291     acatttgataagca 304
               |||||| |||||||
Sbjct: 8227258 acatttcataagca 8227271



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                        
Query: 428     aggagcaggagcaaaaatatcgcggaactgtgttctgtttcatactcctttagagtc 484
               |||||| |||||||||||||| |||||||||||| |  |||||||| ||| ||||||
Sbjct: 8228631 aggagccggagcaaaaatatcacggaactgtgttgtacttcatacttcttcagagtc 8228687
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>dbj|AP006266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0003K21
          Length = 158810

 Score =  117 bits (59), Expect = 3e-23
 Identities = 98/111 (88%)
 Strand = Plus / Plus

                                                                          
Query: 320    gacagatggaatggacactcgtccatataggcttagctggccaaggatgtctatcgtgta 379
              |||||||||||||||||||||||| || ||||| |||||||||||| ||||| | |||||
Sbjct: 110400 gacagatggaatggacactcgtccttacaggctaagctggccaaggttgtctgttgtgta 110459

                                                                 
Query: 380    cgatgtatcacctggaagaatcttcagtacagcagcccagcaactcagagg 430
               |||||||||||| ||||| |||||| ||| ||| | ||||||||||||||
Sbjct: 110460 tgatgtatcacctagaagagtcttcattactgcatcacagcaactcagagg 110510



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Plus

                                                                  
Query: 149    atcccctttttattgatccatatgctgctgtgctactttcacttgatgtggc 200
              |||| ||||||||||| |||||||| ||||| ||||||||||||||||||||
Sbjct: 110139 atcctctttttattgacccatatgcagctgttctactttcacttgatgtggc 110190



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                          
Query: 231    tttaatgccatctgcagatcattataggctaactactagatatcttgatgagaaactgca 290
              ||||||||||  |||||| ||||||||||||   || |||||| ||||||| ||| ||||
Sbjct: 110221 tttaatgccaagtgcagaacattataggctagtgaccagatatattgatgacaaattgca 110280

                            
Query: 291    acatttgataagca 304
              |||||| |||||||
Sbjct: 110281 acatttcataagca 110294



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                       
Query: 428    aggagcaggagcaaaaatatcgcggaactgtgttctgtttcatactcctttagagtc 484
              |||||| |||||||||||||| |||||||||||| |  |||||||| ||| ||||||
Sbjct: 111654 aggagccggagcaaaaatatcacggaactgtgttgtacttcatacttcttcagagtc 111710
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>dbj|AP004344.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0639B07
          Length = 138780

 Score =  117 bits (59), Expect = 3e-23
 Identities = 98/111 (88%)
 Strand = Plus / Plus

                                                                         
Query: 320   gacagatggaatggacactcgtccatataggcttagctggccaaggatgtctatcgtgta 379
             |||||||||||||||||||||||| || ||||| |||||||||||| ||||| | |||||
Sbjct: 22489 gacagatggaatggacactcgtccttacaggctaagctggccaaggttgtctgttgtgta 22548

                                                                
Query: 380   cgatgtatcacctggaagaatcttcagtacagcagcccagcaactcagagg 430
              |||||||||||| ||||| |||||| ||| ||| | ||||||||||||||
Sbjct: 22549 tgatgtatcacctagaagagtcttcattactgcatcacagcaactcagagg 22599



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Plus

                                                                 
Query: 149   atcccctttttattgatccatatgctgctgtgctactttcacttgatgtggc 200
             |||| ||||||||||| |||||||| ||||| ||||||||||||||||||||
Sbjct: 22228 atcctctttttattgacccatatgcagctgttctactttcacttgatgtggc 22279



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                         
Query: 231   tttaatgccatctgcagatcattataggctaactactagatatcttgatgagaaactgca 290
             ||||||||||  |||||| ||||||||||||   || |||||| ||||||| ||| ||||
Sbjct: 22310 tttaatgccaagtgcagaacattataggctagtgaccagatatattgatgacaaattgca 22369

                           
Query: 291   acatttgataagca 304
             |||||| |||||||
Sbjct: 22370 acatttcataagca 22383



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                      
Query: 428   aggagcaggagcaaaaatatcgcggaactgtgttctgtttcatactcctttagagtc 484
             |||||| |||||||||||||| |||||||||||| |  |||||||| ||| ||||||
Sbjct: 23743 aggagccggagcaaaaatatcacggaactgtgttgtacttcatacttcttcagagtc 23799
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>ref|XM_755964.1| Ustilago maydis 521 hypothetical protein (UM04910.1) partial mRNA
          Length = 1503

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 111 tcctcctcgtcttcgttcagcagccgcagtcgtc 144
           |||||||||||||||||| ||| ||||| |||||
Sbjct: 304 tcctcctcgtcttcgttcggcatccgcaatcgtc 337
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>emb|AL353637.21| Human DNA sequence from clone RP11-159H20 on chromosome 9q21.12-21.32
             Contains a DnaJ (Hsp40) homolog subfamily B member 5
             (DNAJB5) pseudogene, a lysophospholipase II (LYPLA2)
             pseudogene, an eukaryotic translation initiation factor 3
             subunit 1 35kDa (EIF3S1) pseudogene, the gene (possible
             pseudogene) for a novel protein similar to forkhead box B1
             (FOXB1), ATP synthase H+ transporting mitochondrial F0
             complex subunit f isoform 2 (ATP5J2) pseudogene and three
             CpG islands, complete sequence
          Length = 146466

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 421   aactcagaggagcaggagcaaaaat 445
             ||||||||||||||| |||||||||
Sbjct: 78420 aactcagaggagcagaagcaaaaat 78444
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>ref|NM_136209.2| Drosophila melanogaster CG9318-RA (CG9318), mRNA
          Length = 2582

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 173  ctgctgtgctactttcacttg 193
            |||||||||||||||||||||
Sbjct: 1958 ctgctgtgctactttcacttg 1978
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>gb|AY069665.1| Drosophila melanogaster LD44273 full length cDNA
          Length = 2574

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 173  ctgctgtgctactttcacttg 193
            |||||||||||||||||||||
Sbjct: 1932 ctgctgtgctactttcacttg 1952
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>gb|AC093047.1| Drosophila melanogaster, chromosome 2L, region 38D-38E, BAC clone
              BACR31P14, complete sequence
          Length = 156806

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 173    ctgctgtgctactttcacttg 193
              |||||||||||||||||||||
Sbjct: 130611 ctgctgtgctactttcacttg 130591
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 235      atgccatctgcagatcattat 255
                |||||||||||||||||||||
Sbjct: 28603474 atgccatctgcagatcattat 28603494
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>gb|AC007467.4|AC007467 Drosophila melanogaster, chromosome 2L, region 38E-38F, BAC clone
            BACR07D17, complete sequence
          Length = 173422

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 173  ctgctgtgctactttcacttg 193
            |||||||||||||||||||||
Sbjct: 1213 ctgctgtgctactttcacttg 1193
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>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0550B04
          Length = 150131

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 235   atgccatctgcagatcattat 255
             |||||||||||||||||||||
Sbjct: 94952 atgccatctgcagatcattat 94972
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>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0622F03
          Length = 170064

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 235  atgccatctgcagatcattat 255
            |||||||||||||||||||||
Sbjct: 4040 atgccatctgcagatcattat 4060
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>gb|AE003667.3| Drosophila melanogaster chromosome 2L, section 76 of 83 of the complete
              sequence
          Length = 257666

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 173    ctgctgtgctactttcacttg 193
              |||||||||||||||||||||
Sbjct: 248633 ctgctgtgctactttcacttg 248613
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>gb|AC004759.1|AC004759 Drosophila melanogaster DNA sequence (P1s DS04217 (D56) and DS00582
             (D85)), complete sequence
          Length = 142799

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 173   ctgctgtgctactttcacttg 193
             |||||||||||||||||||||
Sbjct: 88322 ctgctgtgctactttcacttg 88342
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 70      cgctccccgacggcctcctc 89
               ||||||||||||||||||||
Sbjct: 1712727 cgctccccgacggcctcctc 1712708
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>gb|AC159963.7| Mus musculus chromosome 15, clone RP23-338F23, complete sequence
          Length = 228337

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 348   aggcttagctggccaaggat 367
             ||||||||||||||||||||
Sbjct: 72503 aggcttagctggccaaggat 72522
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>gb|DQ447649.1| Lake Victoria marburgvirus - Ravn, complete genome
          Length = 19114

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 114  tcctcgtcttcgttcagcag 133
            ||||||||||||||||||||
Sbjct: 1515 tcctcgtcttcgttcagcag 1496
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>emb|AL591408.19| Human DNA sequence from clone RP11-792D24 on chromosome 10 Contains the
             INA gene for internexin neuronal intermediate filament
             protein alpha, the RNF134 gene for ring finger protein
             134, the TAF5D gene for 100 kD TAF5 RNA polymerase II TATA
             box binding protein (TBP)-associated factor, a novel gene,
             the 5' end of the PDCD11 gene for programmed cell death 11
             and four CpG islands, complete sequence
          Length = 174474

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 219   tctcgtctctcctttaatgccatc 242
             |||||| |||||||||||||||||
Sbjct: 50407 tctcgtttctcctttaatgccatc 50384
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>ref|XM_501810.1| Yarrowia lipolytica CLIB122, YALI0C13904g predicted mRNA
          Length = 3795

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 74  ccccgacggcctcctcgtct 93
           ||||||||||||||||||||
Sbjct: 400 ccccgacggcctcctcgtct 381
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>emb|AL606724.17| Mouse DNA sequence from clone RP23-285D3 on chromosome 11 Contains part
              of a novel gene, a heat shock protein (Hsp) pseudogene and
              a CpG island, complete sequence
          Length = 160470

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 268    agatatcttgatgagaaact 287
              ||||||||||||||||||||
Sbjct: 114879 agatatcttgatgagaaact 114898
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>gb|AC022780.19| Mus musculus chromosome 11, clone RP23-179C3, complete sequence
          Length = 237498

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 268    agatatcttgatgagaaact 287
              ||||||||||||||||||||
Sbjct: 223562 agatatcttgatgagaaact 223581
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>gb|AC092169.4| Homo sapiens BAC clone RP11-791I11 from 2, complete sequence
          Length = 192927

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    tattgatccatatgctgctg 178
              ||||||||||||||||||||
Sbjct: 176023 tattgatccatatgctgctg 176004
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>gb|AC012499.8| Homo sapiens BAC clone RP11-428I14 from 2, complete sequence
          Length = 183436

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 460   ttctgtttcatactccttta 479
             ||||||||||||||||||||
Sbjct: 84361 ttctgtttcatactccttta 84342
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>gb|AC013440.7| Homo sapiens BAC clone RP11-292A20 from 2, complete sequence
          Length = 158548

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    tattgatccatatgctgctg 178
              ||||||||||||||||||||
Sbjct: 151862 tattgatccatatgctgctg 151843
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>dbj|AK115591.1| Ciona intestinalis cDNA, clone:cilv005o09, full insert sequence
          Length = 1145

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 457 gtgttctgtttcatactcct 476
           ||||||||||||||||||||
Sbjct: 790 gtgttctgtttcatactcct 771
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>gb|AC141469.4| Mus musculus BAC clone RP24-439P5 from 5, complete sequence
          Length = 183468

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     cgccggccgtccccgccagg 63
              ||||||||||||||||||||
Sbjct: 126195 cgccggccgtccccgccagg 126176
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 74      ccccgacggcctcctcgtct 93
               ||||||||||||||||||||
Sbjct: 1928679 ccccgacggcctcctcgtct 1928660


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,744,817
Number of Sequences: 3902068
Number of extensions: 3744817
Number of successful extensions: 79831
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79647
Number of HSP's gapped (non-prelim): 184
length of query: 484
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 462
effective length of database: 17,147,199,772
effective search space: 7922006294664
effective search space used: 7922006294664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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