>LRRK2_HUMAN (Q5S007) Leucine-rich repeat serine/threonine-protein kinase 2 (EC|
           2.7.11.1) (Dardarin)
          Length = 2527

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -3

Query: 246 EEDGHLEAHRQRPCSCCIHSSRKSEMQ 166
           +EDGH  AHR+   S  +HSS K   Q
Sbjct: 390 DEDGHFPAHREVMLSMLMHSSSKEVFQ 416

>CH60_PSEPU (P48216) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 544

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
 Frame = -2

Query: 283 GDDPGVLANCM*RRGWSSRGSPTET--------LLLLHPQQ*KIRNAAMNEKAAVGSTTV 128
           GD+P V+AN + ++G  + G    T        + +L P   K+  +A+   A++G   +
Sbjct: 456 GDEPSVVANKV-KQGSGNFGYNAATGEYGDMIEMGILDPA--KVTRSALQAAASIGGLMI 512

Query: 127 KTNFM*LCCLSEGEAGGGTP 68
            T  M     S+  AGGG P
Sbjct: 513 TTEAMIADAPSDAPAGGGMP 532

>GET1_HUMAN (O95210) Genethonin-1 (GENX-3414)|
          Length = 358

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 240 PLLHMQLANTPGSSPIIHASSSQLHKDDQRVRTSKAGA-SMSRCFPCCFKTSTDV 401
           P+L++      G S ++ A   Q+H   +RV    AG+  +S  F   + TSTDV
Sbjct: 224 PVLNLNQGMDNGRSTLVEARGQQVHGKMERVAVMPAGSQQVSVRFQVHYVTSTDV 278

>GLYA_GLOVI (Q7ND67) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine|
           methylase) (SHMT)
          Length = 426

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -3

Query: 153 RPLSEARRSRLILCSCAAYPKVKLEEALPDASSQV 49
           R L+ A R +LI+C  +AYP+V   E   + + +V
Sbjct: 160 RELAHAHRPKLIICGYSAYPRVIDFECFREIADEV 194

>IPO11_MOUSE (Q8K2V6) Importin-11 (Imp11) (Ran-binding protein 11) (RanBP11)|
          Length = 975

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +1

Query: 226 LEMTILFFTCSWLTHLDRHPLSMHP 300
           LE TI+ FT   L  LD+HP+S  P
Sbjct: 266 LEKTIILFTKVLLDFLDQHPISFTP 290


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,472,628
Number of Sequences: 219361
Number of extensions: 1270844
Number of successful extensions: 3000
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3000
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)