ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd27f04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1055 bits (532), Expect = 0.0 Identities = 535/536 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120003 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119944 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119943 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119884 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119883 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 119824 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119823 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 119764 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119763 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 119704 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119703 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 119644 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119643 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 119584 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119583 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 119524 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119523 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 119468 Score = 1055 bits (532), Expect = 0.0 Identities = 535/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94891 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 94950 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94951 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 95010 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95011 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 95070 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95071 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 95130 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95131 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 95190 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95191 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 95250 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95251 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 95310 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95311 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 95370 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95371 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 95426
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118784 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 118725 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118724 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 118665 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118664 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 118605 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118604 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 118545 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118544 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 118485 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118484 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 118425 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118424 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 118365 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118364 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 118305 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118304 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 118249
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 914 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 855 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 854 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 795 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 735 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 734 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 675 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 674 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 615 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 614 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 555 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 554 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 495 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 494 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 435 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 379
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119868 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119809 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119808 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119749 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119748 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 119689 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119688 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 119629 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119628 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 119569 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119568 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 119509 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119508 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 119449 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119448 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 119389 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119388 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 119333 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95288 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 95347 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95348 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 95407 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95408 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 95467 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95468 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 95527 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95528 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 95587 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95588 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 95647 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95648 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 95707 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95708 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 95767 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95768 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 95823
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119868 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119809 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119808 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119749 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119748 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 119689 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119688 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 119629 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119628 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 119569 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119568 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 119509 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119508 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 119449 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119448 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 119389 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119388 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 119333 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95288 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 95347 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95348 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 95407 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95408 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 95467 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95468 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 95527 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95528 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 95587 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95588 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 95647 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95648 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 95707 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95708 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 95767 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95768 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 95823
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119817 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119758 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119757 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119698 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119697 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 119638 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119637 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 119578 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119577 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 119518 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119517 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 119458 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119457 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 119398 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119397 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 119338 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119337 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 119282 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95233 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 95292 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95293 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 95352 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95353 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 95412 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95413 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 95472 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95473 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 95532 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95533 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 95592 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95593 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 95652 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95653 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 95712 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95713 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 95768
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507866 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 31507925 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507926 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 31507985 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507986 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 31508045 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508046 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 31508105 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508106 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 31508165 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508166 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 31508225 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508226 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 31508285 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508286 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 31508345 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508346 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 31508401
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84730 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 84671 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84670 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 84611 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84610 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 84551 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84550 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 84491 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84490 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 84431 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84430 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 84371 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84370 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 84311 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84310 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 84251 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84250 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 84195
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119837 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119778 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119777 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119718 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119717 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 119658 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119657 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 119598 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119597 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 119538 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119537 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 119478 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119477 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 119418 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119417 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 119358 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119357 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 119302 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95281 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 95340 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95341 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 95400 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95401 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 95460 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95461 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 95520 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95521 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 95580 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95581 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 95640 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95641 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 95700 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95701 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 95760 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95761 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 95816
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122330 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 122389 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122390 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 122449 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122450 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 122509 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122510 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 122569 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122570 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 122629 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122630 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 122689 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122690 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 122749 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122750 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 122809 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122810 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 122865 Score = 1039 bits (524), Expect = 0.0 Identities = 533/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14055 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 14114 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14115 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 14174 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14175 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 14234 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14235 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 14294 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14295 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 14354 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 14355 ttacgctctgacccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggacca 14414 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14415 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 14474 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14475 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 14534 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14535 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 14590
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44828 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 44769 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44768 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 44709 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44708 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 44649 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44648 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 44589 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44588 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 44529 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44528 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 44469 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44468 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 44409 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44408 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 44349 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44348 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 44293 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20290 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 20349 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20350 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 20409 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20410 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 20469 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20470 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 20529 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20530 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 20589 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20590 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 20649 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20650 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 20709 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20710 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 20769 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20770 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 20825
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58556 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 58497 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58496 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 58437 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58436 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 58377 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58376 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 58317 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58316 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 58257 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58256 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 58197 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58196 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 58137 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58136 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 58077 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58076 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 58021
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1457 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 1398 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1397 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 1338 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1337 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 1278 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1277 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 1218 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1217 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 1158 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1157 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 1098 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1097 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 1038 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1037 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 978 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 977 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 922
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268215 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 9268274 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268275 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 9268334 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268335 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 9268394 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268395 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 9268454 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268455 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 9268514 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268515 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 9268574 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268575 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 9268634 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268635 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 9268694 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268695 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 9268750 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227715 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 9227774 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227775 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 9227834 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227835 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 9227894 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227895 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 9227954 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227955 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 9228014 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228015 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 9228074 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228075 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 9228134 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228135 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 9228194 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228195 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 9228250 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164304 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 9164363 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164364 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 9164423 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164424 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 9164483 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164484 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 9164543 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164544 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 9164603 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164604 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 9164663 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164664 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 9164723 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164724 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 9164783 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164784 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 9164839 Score = 1039 bits (524), Expect = 0.0 Identities = 533/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056129 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 9056188 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056189 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 9056248 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056249 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 9056308 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056309 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 9056368 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056369 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 9056428 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 9056429 ttacgctctgacccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggacca 9056488 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056489 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 9056548 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056549 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 9056608 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056609 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 9056664 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 388 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 447 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 448 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 494 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938200 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 19938259 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938260 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 19938319 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938320 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 19938379 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938380 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 19938439 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938440 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 19938499 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938500 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 19938559 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938560 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 19938619 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938620 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 19938679 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938680 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 19938735 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277231 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 10277172 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277171 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 10277112 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277111 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 10277052 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277051 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 10276992 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276991 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 10276932 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276931 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 10276872 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276871 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 10276812 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276811 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 10276752 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276751 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 10276696 Score = 1039 bits (524), Expect = 0.0 Identities = 533/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387067 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 10387126 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387127 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 10387186 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387187 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 10387246 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387247 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 10387306 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387307 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 10387366 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387367 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 10387426 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387427 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 10387486 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387487 gagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 10387546 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387547 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 10387602 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 406 agtaccgtgagggaaaggtgaaaagaacccc 436 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 231 ttgtgctgctaggcgaagcggttgagtgc 259 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598382 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 31598441 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598442 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 31598501 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598502 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 31598561 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598562 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 31598621 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598622 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 31598681 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598682 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 31598741 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598742 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 31598801 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598802 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 31598861 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598862 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 31598917
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525698 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 33525757 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525758 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 33525817 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525818 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 33525877 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525878 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 33525937 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525938 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 33525997 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525998 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 33526057 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526058 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 33526117 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526118 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 33526177 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526178 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 33526233 Score = 244 bits (123), Expect = 3e-61 Identities = 129/131 (98%) Strand = Plus / Minus Query: 410 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 469 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 470 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 529 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 530 gccggcgactc 540 ||||||||||| Sbjct: 16677981 gccggcgactc 16677971 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 533 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 390 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 436 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 390 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 436 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 417 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 455 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47843 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 47784 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47783 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 47724 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47723 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 47664 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47663 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 47604 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47603 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 47544 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47543 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 47484 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47483 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 47424 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47423 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 47364 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47363 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 47308
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70895 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 70954 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70955 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 71014 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71015 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 71074 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71075 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 71134 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71135 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 71194 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71195 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 71254 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71255 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 71314 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71315 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 71374 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71375 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 71430 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 390 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 436 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 390 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 436 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123667 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 123608 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123607 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 123548 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123547 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 123488 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123487 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 123428 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123427 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 123368 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123367 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 123308 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123307 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 123248 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123247 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 123188 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123187 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 123132 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99170 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 99229 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99230 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 99289 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99290 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 99349 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99350 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 99409 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99410 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 99469 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99470 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 99529 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99530 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 99589 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99590 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 99649 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99650 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 99705
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 186 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 246 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 306 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 307 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 366 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 426 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 486 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 487 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 546 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 602
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 123 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 183 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 243 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 303 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 363 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 423 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 483 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 543 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 544 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 599
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949476 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 19949535 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949536 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 19949595 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949596 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 19949655 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949656 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 19949715 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949716 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 19949775 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949776 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 19949835 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949836 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 19949895 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949896 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 19949955 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949956 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 19950011 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283270 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 10283211 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283210 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 10283151 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283150 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 10283091 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283090 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 10283031 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283030 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 10282971 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282970 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 10282911 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282910 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 10282851 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282850 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 10282791 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282790 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 10282735 Score = 1039 bits (524), Expect = 0.0 Identities = 533/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393106 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 10393165 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393166 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 10393225 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393226 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 10393285 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393286 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 10393345 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393346 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 10393405 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393406 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 10393465 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393466 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 10393525 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393526 gagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 10393585 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393586 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 10393641 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 390 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 436 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 231 ttgtgctgctaggcgaagcggttgagtgc 259 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124384 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 124325 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124324 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124265 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124264 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 124205 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124204 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 124145 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124144 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 124085 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124084 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 124025 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124024 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 123965 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123964 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 123905 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123904 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 123849 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99847 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 99906 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99907 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 99966 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99967 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 100026 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100027 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 100086 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100087 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 100146 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100147 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 100206 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100207 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 100266 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100267 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 100326 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100327 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 100382
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119811 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119752 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119751 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119692 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119691 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 119632 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119631 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 119572 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119571 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 119512 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119511 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 119452 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119451 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 119392 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119391 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 119332 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119331 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 119276 Score = 1047 bits (528), Expect = 0.0 Identities = 534/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95228 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 95287 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95288 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 95347 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95348 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 95407 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95408 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 95467 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95468 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 95527 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95528 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 95587 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95588 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 95647 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95648 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 95707 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95708 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 95763
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1039 bits (524), Expect = 0.0 Identities = 533/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140863 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 140922 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140923 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 140982 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140983 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 141042 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141043 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 141102 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141103 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 141162 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 141163 ttacgctctgacccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggacca 141222 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141223 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 141282 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141283 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 141342 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141343 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 141398
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1039 bits (524), Expect = 0.0 Identities = 533/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93459 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 93518 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93519 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 93578 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93579 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 93638 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93639 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 93698 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93699 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 93758 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93759 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 93818 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93819 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 93878 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93879 gagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 93938 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93939 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 93994
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1039 bits (524), Expect = 0.0 Identities = 533/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27523 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 27582 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27583 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 27642 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27643 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 27702 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27703 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 27762 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27763 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 27822 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27823 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 27882 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27883 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 27942 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27943 gagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 28002 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28003 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 28058
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1031 bits (520), Expect = 0.0 Identities = 532/536 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242066 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 9242007 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242006 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 9241947 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 9241946 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatggga 9241887 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241886 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 9241827 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241826 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 9241767 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241766 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 9241707 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241706 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 9241647 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241646 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 9241587 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9241586 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactc 9241531 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 113 actgaaacatcttagtagccagaggaaaagaaag 146 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1031 bits (520), Expect = 0.0 Identities = 532/536 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53279 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 53220 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53219 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 53160 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 53159 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatggga 53100 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53099 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 53040 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53039 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 52980 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52979 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 52920 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52919 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 52860 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52859 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 52800 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 52799 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactc 52744
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1031 bits (520), Expect = 0.0 Identities = 532/536 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 83 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 143 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 203 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 204 gcagcctaaaccgtgaaaacggggttgtgggagagcagtacaagcgttgtgctgctaggc 263 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 323 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 383 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 443 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 503 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 504 tgggaggggaaattgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 559
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 999 bits (504), Expect = 0.0 Identities = 529/536 (98%), Gaps = 1/536 (0%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123606 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 123547 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123546 tttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 123487 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123486 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 123427 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 123426 gcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggc 123367 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| || Sbjct: 123366 gaagcggttgagtgccgcaccctagatggctatagtccagtagccgatagcatcact-gc 123308 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123307 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 123248 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123247 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 123188 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123187 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 123128 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123127 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 123072 Score = 999 bits (504), Expect = 0.0 Identities = 529/536 (98%), Gaps = 1/536 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99131 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 99190 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99191 tttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 99250 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99251 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 99310 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 99311 gcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggc 99370 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| || Sbjct: 99371 gaagcggttgagtgccgcaccctagatggctatagtccagtagccgatagcatcact-gc 99429 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99430 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 99489 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99490 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 99549 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99550 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 99609 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99610 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 99665
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 999 bits (504), Expect = 0.0 Identities = 529/536 (98%), Gaps = 1/536 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5484 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 5543 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5544 tttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 5603 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5604 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 5663 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 5664 gcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggc 5723 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| || Sbjct: 5724 gaagcggttgagtgccgcaccctagatggctatagtccagtagccgatagcatcact-gc 5782 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5783 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 5842 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5843 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 5902 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5903 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 5962 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5963 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 6018
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 999 bits (504), Expect = 0.0 Identities = 529/536 (98%), Gaps = 1/536 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 131 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132 tttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 191 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 192 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 251 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 252 gcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggc 311 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| || Sbjct: 312 gaagcggttgagtgccgcaccctagatggctatagtccagtagccgatagcatcact-gc 370 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 430 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 490 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 491 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 550 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 606
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 993 bits (501), Expect = 0.0 Identities = 507/509 (99%) Strand = Plus / Plus Query: 32 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 91 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 92 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 152 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 212 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 272 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 331 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 241 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 300 Query: 332 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 360 Query: 392 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 420 Query: 452 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 480 Query: 512 gtgcctgttgaagaatgagccggcgactc 540 ||||||||||||||||||||||||||||| Sbjct: 481 gtgcctgttgaagaatgagccggcgactc 509
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 977 bits (493), Expect = 0.0 Identities = 502/505 (99%) Strand = Plus / Plus Query: 36 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 95 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 96 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 155 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 156 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 215 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 216 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240 Query: 276 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 335 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 241 aaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacg 300 Query: 336 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 360 Query: 396 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 420 Query: 456 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 480 Query: 516 ctgttgaagaatgagccggcgactc 540 ||||||||||||||||||||||||| Sbjct: 481 ctgttgaagaatgagccggcgactc 505
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 928 bits (468), Expect = 0.0 Identities = 471/472 (99%) Strand = Plus / Plus Query: 69 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 129 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 189 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 249 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 308 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 309 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 369 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 429 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 420 Query: 489 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 472
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 874 bits (441), Expect = 0.0 Identities = 447/449 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 127 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 187 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 247 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 307 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 367 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 427 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 487 Query: 425 gaaaagaacccccagtgggtagtgaaata 453 ||||||||||||||||||||||||||||| Sbjct: 488 gaaaagaacccccagtgggtagtgaaata 516
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 868 bits (438), Expect = 0.0 Identities = 513/536 (95%), Gaps = 4/536 (0%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 139517 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacct 139458 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 139457 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 139399 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139398 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 139339 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 139338 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 139279 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||| |||| | |||||||||||||| | |||||||||||||||||||||||| || Sbjct: 139278 gaagcggtggagtactgcaccctagatggcgagagtccagtagccgaaagcatcactggc 139219 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139218 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 139159 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139158 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 139099 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||| Sbjct: 139098 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcag 139042 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139041 tgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 138986 Score = 868 bits (438), Expect = 0.0 Identities = 513/536 (95%), Gaps = 4/536 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 110428 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacct 110487 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 110488 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 110546 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110547 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 110606 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 110607 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 110666 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||| |||| | |||||||||||||| | |||||||||||||||||||||||| || Sbjct: 110667 gaagcggtggagtactgcaccctagatggcgagagtccagtagccgaaagcatcactggc 110726 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110727 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 110786 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110787 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 110846 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||| Sbjct: 110847 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcag 110903 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110904 tgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 110959
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 868 bits (438), Expect = 0.0 Identities = 513/536 (95%), Gaps = 4/536 (0%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 127795 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacct 127736 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 127735 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 127677 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 127676 tagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatggga 127617 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 127616 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggc 127557 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||| |||||| |||||||||||||| | |||||||||||||||| |||||||||| Sbjct: 127556 gaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaaacatcactagc 127497 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127496 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 127437 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127436 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 127377 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||| Sbjct: 127376 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcag 127320 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127319 tgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 127264 Score = 868 bits (438), Expect = 0.0 Identities = 513/536 (95%), Gaps = 4/536 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 107127 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacct 107186 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 107187 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 107245 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107246 tagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatggga 107305 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107306 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggc 107365 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||| |||||| |||||||||||||| | |||||||||||||||| |||||||||| Sbjct: 107366 gaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaaacatcactagc 107425 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107426 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 107485 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107486 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 107545 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||| Sbjct: 107546 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcag 107602 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107603 tgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 107658
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 868 bits (438), Expect = 0.0 Identities = 513/536 (95%), Gaps = 4/536 (0%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 134154 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacct 134095 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 134094 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 134036 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134035 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 133976 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 133975 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 133916 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| || || ||| |||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 133915 gaagcagtggaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagc 133856 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133855 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 133796 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133795 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 133736 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 133735 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 133679 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133678 tgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 133623 Score = 868 bits (438), Expect = 0.0 Identities = 513/536 (95%), Gaps = 4/536 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 103817 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacct 103876 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 103877 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 103935 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103936 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 103995 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 103996 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 104055 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| || || ||| |||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 104056 gaagcagtggaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagc 104115 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104116 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 104175 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104176 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 104235 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 104236 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 104292 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104293 tgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 104348
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 852 bits (430), Expect = 0.0 Identities = 511/536 (95%), Gaps = 4/536 (0%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 142039 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatgggtcaacct 141980 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 141979 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 141921 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141920 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 141861 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 141860 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 141801 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||||||||||| | |||||||||||||| | ||||||||| |||||||||||||| || Sbjct: 141800 gaagcggttgagtactgcaccctagatggcgagagtccagtaaccgaaagcatcactggc 141741 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141740 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 141681 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141680 ccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 141621 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||| Sbjct: 141620 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcag 141564 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141563 tgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 141508 Score = 852 bits (430), Expect = 0.0 Identities = 511/536 (95%), Gaps = 4/536 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 111618 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatgggtcaacct 111677 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 111678 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 111736 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111737 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 111796 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 111797 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 111856 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||||||||||| | |||||||||||||| | ||||||||| |||||||||||||| || Sbjct: 111857 gaagcggttgagtactgcaccctagatggcgagagtccagtaaccgaaagcatcactggc 111916 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111917 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 111976 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111977 ccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 112036 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||| Sbjct: 112037 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcag 112093 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112094 tgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 112149
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 850 bits (429), Expect = 0.0 Identities = 511/536 (95%), Gaps = 8/536 (1%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 134912 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacct 134853 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 134852 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 134794 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134793 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 134734 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 134733 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 134674 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| || |||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134673 gaagcagtggagtgctgcaccctagatggctagagtccagtagccgaaagcatcactagc 134614 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134613 ttacgttctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 134554 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134553 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 134494 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||| Sbjct: 134493 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcag 134437 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 134436 tgggaggagaa----atctctgaccgcgtgcctgttgaagaatgagccggcgactc 134385 Score = 850 bits (429), Expect = 0.0 Identities = 511/536 (95%), Gaps = 8/536 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105370 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacct 105429 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 105430 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 105488 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105489 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 105548 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 105549 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 105608 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| || |||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105609 gaagcagtggagtgctgcaccctagatggctagagtccagtagccgaaagcatcactagc 105668 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105669 ttacgttctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 105728 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105729 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 105788 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||| Sbjct: 105789 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcag 105845 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105846 tgggaggagaa----atctctgaccgcgtgcctgttgaagaatgagccggcgactc 105897
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 846 bits (427), Expect = 0.0 Identities = 511/536 (95%), Gaps = 6/536 (1%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 136522 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacct 136463 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 136462 ttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 136404 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136403 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 136344 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 136343 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 136284 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||| |||||| |||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 136283 gaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagc 136224 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136223 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 136164 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 136163 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 136104 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 136103 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 136047 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 136046 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 135993 Score = 846 bits (427), Expect = 0.0 Identities = 511/536 (95%), Gaps = 6/536 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105903 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacct 105962 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 105963 ttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 106021 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106022 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 106081 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 106082 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 106141 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||| |||||| |||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 106142 gaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagc 106201 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106202 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 106261 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106262 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 106321 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 106322 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 106378 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 106379 tgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 106432
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 829 bits (418), Expect = 0.0 Identities = 509/536 (94%), Gaps = 5/536 (0%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 132706 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaacct 132647 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 132646 ttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 132588 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132587 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 132528 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 132527 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 132468 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| || || ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 132467 gaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 132408 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132407 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 132348 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 132347 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 132288 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 132287 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 132231 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 132230 tgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactc 132176 Score = 829 bits (418), Expect = 0.0 Identities = 509/536 (94%), Gaps = 5/536 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 104172 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaacct 104231 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 104232 ttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 104290 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104291 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 104350 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 104351 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 104410 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| || || ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104411 gaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 104470 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104471 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 104530 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 104531 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 104590 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 104591 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 104647 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 104648 tgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactc 104702
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 829 bits (418), Expect = 0.0 Identities = 509/536 (94%), Gaps = 5/536 (0%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||| Sbjct: 132929 gaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaacct 132870 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 132869 tttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 132811 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132810 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 132751 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 132750 gcagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggc 132691 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 132690 gaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagc 132631 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132630 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 132571 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 132570 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 132511 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 132510 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 132454 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | || ||||||||||||||||||||||||||||||||||||||| Sbjct: 132453 tgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactc 132399 Score = 829 bits (418), Expect = 0.0 Identities = 509/536 (94%), Gaps = 5/536 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||| Sbjct: 103835 gaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaacct 103894 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 103895 tttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 103953 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103954 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 104013 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 104014 gcagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggc 104073 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 104074 gaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagc 104133 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104134 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 104193 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 104194 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 104253 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 104254 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 104310 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | || ||||||||||||||||||||||||||||||||||||||| Sbjct: 104311 tgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactc 104365
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 829 bits (418), Expect = 0.0 Identities = 424/426 (99%) Strand = Plus / Plus Query: 24 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 83 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 84 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 144 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 204 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 264 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 323 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 300 Query: 324 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 360 Query: 384 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 420 Query: 444 tagtga 449 |||||| Sbjct: 421 tagtga 426
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 829 bits (418), Expect = 0.0 Identities = 509/536 (94%), Gaps = 5/536 (0%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 132699 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaacct 132640 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 132639 ttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 132581 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132580 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 132521 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 132520 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 132461 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| || || ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 132460 gaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 132401 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132400 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 132341 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 132340 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 132281 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 132280 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 132224 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 132223 tgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactc 132169 Score = 829 bits (418), Expect = 0.0 Identities = 509/536 (94%), Gaps = 5/536 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 104170 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaacct 104229 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 104230 ttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 104288 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104289 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 104348 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 104349 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 104408 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| || || ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104409 gaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 104468 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104469 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 104528 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 104529 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 104588 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 104589 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 104645 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 104646 tgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactc 104700
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 821 bits (414), Expect = 0.0 Identities = 508/536 (94%), Gaps = 5/536 (0%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 131598 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaacct 131539 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 131538 ttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 131480 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131479 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 131420 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 131419 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 131360 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| || || ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 131359 gaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 131300 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131299 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 131240 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 131239 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 131180 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 131179 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 131123 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 131122 tgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactc 131068 Score = 821 bits (414), Expect = 0.0 Identities = 508/536 (94%), Gaps = 5/536 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 103037 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaacct 103096 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 103097 ttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 103155 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103156 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 103215 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 103216 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 103275 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| || || ||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 103276 gaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagc 103335 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103336 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 103395 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 103396 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 103455 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 103456 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 103512 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 103513 tgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactc 103567
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 821 bits (414), Expect = 0.0 Identities = 508/536 (94%), Gaps = 5/536 (0%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||| Sbjct: 133890 gaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaacct 133831 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 133830 tttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 133772 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133771 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 133712 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||| Sbjct: 133711 gcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggc 133652 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 133651 gaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagc 133592 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133591 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 133532 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 133531 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 133472 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 133471 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 133415 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | || ||||||||||||||||||||||||||||||||||||||| Sbjct: 133414 tgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactc 133360 Score = 821 bits (414), Expect = 0.0 Identities = 508/536 (94%), Gaps = 5/536 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||| Sbjct: 104759 gaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaacct 104818 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 104819 tttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 104877 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104878 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 104937 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||| Sbjct: 104938 gcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggc 104997 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 104998 gaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagc 105057 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105058 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 105117 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 105118 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 105177 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 105178 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 105234 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | || ||||||||||||||||||||||||||||||||||||||| Sbjct: 105235 tgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactc 105289
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 813 bits (410), Expect = 0.0 Identities = 507/536 (94%), Gaps = 5/536 (0%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 140291 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacct 140232 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 140231 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 140173 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140172 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 140113 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 140112 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 140053 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||||| || ||| |||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 140052 gaagcggcggaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagc 139993 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139992 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 139933 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 139932 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 139873 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | || |||||||||| Sbjct: 139872 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagttcccaagcag 139816 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 139815 tgggaggag-acgggggctctgaccgcgtgcctgttgaagaatgagccggcgactc 139761 Score = 813 bits (410), Expect = 0.0 Identities = 507/536 (94%), Gaps = 5/536 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 109769 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacct 109828 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 109829 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 109887 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109888 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 109947 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 109948 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 110007 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||||| || ||| |||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 110008 gaagcggcggaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagc 110067 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110068 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 110127 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 110128 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 110187 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | || |||||||||| Sbjct: 110188 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagttcccaagcag 110244 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 110245 tgggaggag-acgggggctctgaccgcgtgcctgttgaagaatgagccggcgactc 110299
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 813 bits (410), Expect = 0.0 Identities = 507/536 (94%), Gaps = 5/536 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||| Sbjct: 68 gaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaacct 127 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 128 tttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 186 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 246 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||| Sbjct: 247 gcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggc 306 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||| ||||||||||||||||||||| | |||||||||||||| |||||||||||| Sbjct: 307 gaagcggtggagtgccgcaccctagatggcgagagtccagtagccgagagcatcactagc 366 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 426 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 427 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 486 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 487 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 543 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | || ||||||||||||||||||||||||||||||||||||||| Sbjct: 544 tgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactc 598
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 813 bits (410), Expect = 0.0 Identities = 507/536 (94%), Gaps = 5/536 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 77 gaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacct 136 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 137 ttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 195 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 tagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 255 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 256 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 315 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| || |||||| |||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 316 gaagcagtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagc 375 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 435 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 436 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 495 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 496 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 552 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 553 tgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactc 607
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 809 bits (408), Expect = 0.0 Identities = 508/537 (94%), Gaps = 7/537 (1%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 136231 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacct 136172 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 136171 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 136113 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136112 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 136053 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 136052 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 135993 Query: 245 gaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| | || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 135992 gaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 135933 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135932 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 135873 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135872 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaggg 135813 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 135812 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 135756 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 135755 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 135701 Score = 809 bits (408), Expect = 0.0 Identities = 508/537 (94%), Gaps = 7/537 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 106399 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacct 106458 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 106459 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 106517 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106518 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 106577 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 106578 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 106637 Query: 245 gaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| | || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 106638 gaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 106697 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106698 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 106757 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106758 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaggg 106817 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 106818 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 106874 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 106875 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 106929
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 809 bits (408), Expect = 0.0 Identities = 508/537 (94%), Gaps = 7/537 (1%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 136869 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacct 136810 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 136809 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 136751 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136750 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 136691 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 136690 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 136631 Query: 245 gaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| | ||| ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 136630 gaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 136571 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136570 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 136511 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 136510 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaggg 136451 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 136450 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 136394 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 136393 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 136339 Score = 809 bits (408), Expect = 0.0 Identities = 508/537 (94%), Gaps = 7/537 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 106688 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacct 106747 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 106748 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 106806 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106807 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 106866 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 106867 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 106926 Query: 245 gaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| | ||| ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 106927 gaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 106986 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106987 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 107046 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 107047 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaggg 107106 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 107107 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 107163 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 107164 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 107218
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 809 bits (408), Expect = 0.0 Identities = 508/537 (94%), Gaps = 7/537 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 1593 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacct 1652 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1653 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 1711 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1712 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 1771 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1772 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 1831 Query: 245 gaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| | || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1832 gaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 1891 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1892 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 1951 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1952 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaggg 2011 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 2012 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 2068 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 2069 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 2123
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 809 bits (408), Expect = 0.0 Identities = 508/537 (94%), Gaps = 7/537 (1%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 135477 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacct 135418 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 135417 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 135359 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135358 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 135299 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 135298 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 135239 Query: 245 gaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| | ||| ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 135238 gaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 135179 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135178 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 135119 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135118 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaggg 135059 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 135058 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 135002 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 135001 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 134947 Score = 809 bits (408), Expect = 0.0 Identities = 508/537 (94%), Gaps = 7/537 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 105559 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacct 105618 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 105619 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 105677 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105678 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 105737 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 105738 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 105797 Query: 245 gaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| | ||| ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 105798 gaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 105857 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105858 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 105917 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 105918 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaggg 105977 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 105978 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 106034 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 106035 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 106089
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 809 bits (408), Expect = 0.0 Identities = 508/537 (94%), Gaps = 7/537 (1%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 135612 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacct 135553 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 135552 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 135494 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135493 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 135434 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 135433 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 135374 Query: 245 gaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| | ||| ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 135373 gaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 135314 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135313 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 135254 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135253 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaggg 135194 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 135193 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 135137 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 135136 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 135082 Score = 809 bits (408), Expect = 0.0 Identities = 508/537 (94%), Gaps = 7/537 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 105731 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacct 105790 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 105791 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 105849 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105850 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 105909 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 105910 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 105969 Query: 245 gaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| | ||| ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 105970 gaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 106029 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106030 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 106089 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106090 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaggg 106149 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 106150 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 106206 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 106207 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 106261
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 809 bits (408), Expect = 0.0 Identities = 508/537 (94%), Gaps = 7/537 (1%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 135610 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacct 135551 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 135550 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 135492 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135491 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 135432 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 135431 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 135372 Query: 245 gaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| | ||| ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 135371 gaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 135312 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135311 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 135252 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135251 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaggg 135192 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 135191 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 135135 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 135134 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 135080 Score = 809 bits (408), Expect = 0.0 Identities = 508/537 (94%), Gaps = 7/537 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 105728 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacct 105787 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 105788 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 105846 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105847 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 105906 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 105907 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 105966 Query: 245 gaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| | ||| ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 105967 gaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 106026 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106027 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 106086 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106087 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaggg 106146 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 106147 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 106203 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 106204 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 106258
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 809 bits (408), Expect = 0.0 Identities = 508/537 (94%), Gaps = 7/537 (1%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 135522 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacct 135463 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 135462 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 135404 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135403 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 135344 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 135343 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 135284 Query: 245 gaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| | ||| ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 135283 gaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 135224 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135223 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 135164 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135163 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaggg 135104 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 135103 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 135047 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 135046 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 134992 Score = 809 bits (408), Expect = 0.0 Identities = 508/537 (94%), Gaps = 7/537 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 105606 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacct 105665 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 105666 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 105724 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105725 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 105784 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 105785 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 105844 Query: 245 gaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| | ||| ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 105845 gaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 105904 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105905 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 105964 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 105965 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaggg 106024 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 106025 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 106081 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 106082 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 106136
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 809 bits (408), Expect = 0.0 Identities = 508/537 (94%), Gaps = 7/537 (1%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 136229 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacct 136170 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 136169 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 136111 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136110 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 136051 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 136050 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 135991 Query: 245 gaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| | || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 135990 gaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 135931 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135930 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 135871 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135870 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaggg 135811 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 135810 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 135754 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 135753 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 135699 Score = 809 bits (408), Expect = 0.0 Identities = 508/537 (94%), Gaps = 7/537 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 106397 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacct 106456 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 106457 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 106515 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106516 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 106575 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 106576 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 106635 Query: 245 gaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| | || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 106636 gaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 106695 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106696 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 106755 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106756 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaggg 106815 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 106816 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 106872 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 106873 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 106927
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 807 bits (407), Expect = 0.0 Identities = 507/536 (94%), Gaps = 7/536 (1%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 135489 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacct 135430 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 135429 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 135371 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135370 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 135311 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 135310 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 135251 Query: 245 gaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| | ||| ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 135250 gaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 135191 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135190 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 135131 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135130 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaggg 135071 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 135070 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 135014 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 135013 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 134960 Score = 807 bits (407), Expect = 0.0 Identities = 507/536 (94%), Gaps = 7/536 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 105573 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacct 105632 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 105633 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 105691 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105692 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 105751 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 105752 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 105811 Query: 245 gaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| | ||| ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 105812 gaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 105871 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105872 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 105931 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 105932 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaggg 105991 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 105992 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 106048 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 106049 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 106102
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 801 bits (404), Expect = 0.0 Identities = 507/537 (94%), Gaps = 7/537 (1%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||| Sbjct: 135960 gaaatgcttcggggagttgaaaataagcatagatccggggattcccgaatagggcaacct 135901 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 135900 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 135842 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135841 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 135782 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 135781 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 135722 Query: 245 gaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| | || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 135721 gaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 135662 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135661 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 135602 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135601 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaggg 135542 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 135541 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 135485 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 135484 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 135430 Score = 801 bits (404), Expect = 0.0 Identities = 507/537 (94%), Gaps = 7/537 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||| Sbjct: 106178 gaaatgcttcggggagttgaaaataagcatagatccggggattcccgaatagggcaacct 106237 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 106238 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 106296 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106297 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 106356 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 106357 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 106416 Query: 245 gaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| | || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 106417 gaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 106476 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106477 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 106536 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106537 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaggg 106596 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 106597 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 106653 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 106654 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 106708
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 797 bits (402), Expect = 0.0 Identities = 505/536 (94%), Gaps = 5/536 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 106074 gaaatgcttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaacct 106133 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 106134 ttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 106192 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106193 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 106252 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 106253 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 106312 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| || ||||| |||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 106313 gaagcagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagc 106372 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106373 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 106432 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 106433 ccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggt 106492 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | |||| |||||||| Sbjct: 106493 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcag 106549 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 106550 tgggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactc 106604 Score = 747 bits (377), Expect = 0.0 Identities = 504/539 (93%), Gaps = 8/539 (1%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 135835 gaaatgcttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaacct 135776 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 135775 ttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 135717 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135716 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 135657 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagc-aatacaagcgttgtgctgctagg 243 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 135656 gcagcctaaaccgtgaaaacggggttgtgggagagcaaatacaagcgtcgtgctgctagg 135597 Query: 244 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 |||||| || ||||| |||||||||||||| | |||||||||||||||||||||||||| Sbjct: 135596 cgaagcagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatcactag 135537 Query: 304 cttatg-ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag-caagga 361 |||| | | |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 135536 cttacgcccctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagccaagga 135477 Query: 362 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 421 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135476 ccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaag 135417 Query: 422 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 481 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||| ||||| Sbjct: 135416 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaag 135360 Query: 482 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||| | | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 135359 cagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactc 135302
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 797 bits (402), Expect = 0.0 Identities = 505/536 (94%), Gaps = 5/536 (0%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 131722 gaaatgcttcggggagttgaaaataagcagagatccggagattcccgaataggtcaacct 131663 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||| | ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 131662 ttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 131604 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131603 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 131544 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 131543 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 131484 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||| | || |||||| | ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 131483 gaatcagtggagtgcggaaccctagatggtgaaagtccagtagccgaaagcatcactagc 131424 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131423 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 131364 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 131363 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 131304 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||| ||||||| Sbjct: 131303 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcag 131247 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 131246 tgggagggggaccaga-ccctgaccgcgtgcctgttgaagaatgagccggcgactc 131192 Score = 797 bits (402), Expect = 0.0 Identities = 505/536 (94%), Gaps = 5/536 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 101723 gaaatgcttcggggagttgaaaataagcagagatccggagattcccgaataggtcaacct 101782 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||| | ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 101783 ttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 101841 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101842 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 101901 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 101902 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 101961 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||| | || |||||| | ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 101962 gaatcagtggagtgcggaaccctagatggtgaaagtccagtagccgaaagcatcactagc 102021 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102022 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 102081 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 102082 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 102141 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||| ||||||| Sbjct: 102142 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcag 102198 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 102199 tgggagggggaccaga-ccctgaccgcgtgcctgttgaagaatgagccggcgactc 102253
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 797 bits (402), Expect = 0.0 Identities = 505/536 (94%), Gaps = 5/536 (0%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 136111 gaaatgcttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaacct 136052 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 136051 ttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 135993 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135992 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 135933 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 135932 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 135873 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| || ||||| |||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 135872 gaagcagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagc 135813 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135812 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 135753 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 135752 ccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggt 135693 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | |||| |||||||| Sbjct: 135692 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcag 135636 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 135635 tgggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactc 135581 Score = 797 bits (402), Expect = 0.0 Identities = 505/536 (94%), Gaps = 5/536 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 106296 gaaatgcttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaacct 106355 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 106356 ttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 106414 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106415 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 106474 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 106475 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 106534 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| || ||||| |||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 106535 gaagcagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagc 106594 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106595 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 106654 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 106655 ccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggt 106714 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | |||| |||||||| Sbjct: 106715 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcag 106771 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 106772 tgggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactc 106826
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 795 bits (401), Expect = 0.0 Identities = 503/535 (94%), Gaps = 4/535 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||| Sbjct: 70 gaaatgcttcggggagctgaaaataagcatagatccggagattcccgaatgggttaacct 129 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||| |||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 130 tttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatct 188 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 248 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 | |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| Sbjct: 249 gtagcctaaaccgtgaaaacggggttgtgggagagcaatataagtgttgtgttgctaggc 308 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||||||||||| |||||||| |||||| | ||||||||||||||||||||||||||| Sbjct: 309 gaagcggttgagtcccgcaccccagatggtgagagtccagtagccgaaagcatcactagc 368 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 ttacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 428 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 488 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 489 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 545 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 tgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgact 600
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 791 bits (399), Expect = 0.0 Identities = 506/537 (94%), Gaps = 6/537 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 69 gaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacct 128 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 129 ttcaaactgc-tgctgaatccatgggcaggcaagagacaacctaacgaactgaaacatct 187 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc-ggcgagcgaaatggg 183 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 188 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcaggcgagcgaaatggg 247 Query: 184 agcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctagg 243 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 248 agcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctagg 307 Query: 244 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 308 cgaagcggtgaagtgccgaaccctagatggctagagtccagtagccgaaagcatcactag 367 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 427 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 428 accttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaggg 487 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 488 tgaaaagaacccccaccggggagtgaaatagaacatgaaaccg---taagctcccaagca 544 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 545 gtgggaggagcctg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactc 600
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 787 bits (397), Expect = 0.0 Identities = 466/487 (95%), Gaps = 4/487 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 46321 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacct 46380 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 46381 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 46439 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46440 tactagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 46499 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 46500 acagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 46559 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 46560 gaagcggtggagtaccgcaccctagatggctagagtccagtagccgaaagcatcactagc 46619 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46620 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 46679 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 46680 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 46739 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||| ||||||| Sbjct: 46740 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcag 46796 Query: 485 tgggagg 491 ||||||| Sbjct: 46797 tgggagg 46803 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 46856
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 787 bits (397), Expect = 0.0 Identities = 466/487 (95%), Gaps = 4/487 (0%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 130466 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacct 130407 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||| | ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 130406 ttcgaactac-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 130348 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130347 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 130288 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 130287 gcagcctaaaccgtgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggc 130228 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 130227 gaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagc 130168 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130167 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 130108 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 130107 ccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggt 130048 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 130047 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 129991 Query: 485 tgggagg 491 ||||||| Sbjct: 129990 tgggagg 129984 Score = 787 bits (397), Expect = 0.0 Identities = 466/487 (95%), Gaps = 4/487 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 101990 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacct 102049 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||| | ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 102050 ttcgaactac-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 102108 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102109 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 102168 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 102169 gcagcctaaaccgtgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggc 102228 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 102229 gaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagc 102288 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102289 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 102348 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 102349 ccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggt 102408 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 102409 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 102465 Query: 485 tgggagg 491 ||||||| Sbjct: 102466 tgggagg 102472 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||||||||||||||||||||||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 129931 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||||||||||||||||||||||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 102525
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 785 bits (396), Expect = 0.0 Identities = 506/537 (94%), Gaps = 8/537 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 44 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacct 103 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 104 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 162 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 222 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 223 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 282 Query: 245 gaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| | ||| ||| |||||| | ||||| |||||||||||||||||||||||||||| Sbjct: 283 gaagcagcctgaatgctgcaccc-atatggcgaaagtccagtagccgaaagcatcactag 341 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 342 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 401 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 402 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaggg 461 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 462 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 518 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 519 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 573
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 783 bits (395), Expect = 0.0 Identities = 398/399 (99%) Strand = Plus / Plus Query: 142 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 202 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 262 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 321 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 322 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 382 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 442 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360 Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 399
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 779 bits (393), Expect = 0.0 Identities = 396/397 (99%) Strand = Plus / Plus Query: 144 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 204 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 264 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 323 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 324 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 384 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 444 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 504 ctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactc 397
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 779 bits (393), Expect = 0.0 Identities = 396/397 (99%) Strand = Plus / Plus Query: 144 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 204 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 264 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 323 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 324 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 384 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 444 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 504 ctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactc 397
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 777 bits (392), Expect = 0.0 Identities = 504/537 (93%), Gaps = 7/537 (1%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 139435 gaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacct 139376 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 139375 ttcgaactgc-tgctgaatccatgggcagacaagagacaacctggcgaactgaaacatct 139317 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139316 tagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 139257 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 139256 gcagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggc 139197 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||| ||||||| |||||||||||| | ||||||||||||||||||||||||||| Sbjct: 139196 gaagcggtgaagtgccgaaccctagatggcgatagtccagtagccgaaagcatcactagc 139137 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139136 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 139077 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 139076 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 139017 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 ||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 139016 gaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 138960 Query: 485 tgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 138959 tgggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 138905 Score = 777 bits (392), Expect = 0.0 Identities = 504/537 (93%), Gaps = 7/537 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 109662 gaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacct 109721 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 109722 ttcgaactgc-tgctgaatccatgggcagacaagagacaacctggcgaactgaaacatct 109780 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109781 tagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 109840 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 109841 gcagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggc 109900 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||| ||||||| |||||||||||| | ||||||||||||||||||||||||||| Sbjct: 109901 gaagcggtgaagtgccgaaccctagatggcgatagtccagtagccgaaagcatcactagc 109960 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109961 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 110020 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 110021 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 110080 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 ||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 110081 gaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 110137 Query: 485 tgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 110138 tgggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 110192
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 777 bits (392), Expect = 0.0 Identities = 395/396 (99%) Strand = Plus / Plus Query: 145 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 205 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 265 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 324 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 325 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 385 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 445 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 505 tgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactc 396
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 777 bits (392), Expect = 0.0 Identities = 395/396 (99%) Strand = Plus / Plus Query: 145 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 205 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 265 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 324 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 325 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 385 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 445 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 505 tgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactc 399
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 773 bits (390), Expect = 0.0 Identities = 393/394 (99%) Strand = Plus / Plus Query: 147 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 207 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 267 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 326 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 327 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 387 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 447 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 507 accgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||| Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactc 394
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 773 bits (390), Expect = 0.0 Identities = 505/539 (93%), Gaps = 7/539 (1%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 139644 gaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacct 139585 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 139584 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 139526 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139525 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 139466 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 139465 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 139406 Query: 245 gaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| || || ||| ||||||||||||| | |||||||||||||||||||||||||| Sbjct: 139405 gaagcagtgcgaatgctgcaccctagatggtgagagtccagtagccgaaagcatcactag 139346 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139345 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 139286 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 139285 accttgcaaggctaaatactcctgggtgacccatagcgaagtagtaccgtgagggaaggg 139226 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 139225 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 139169 Query: 484 gtgggagggga--aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| || | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 139168 gtgggaggagactactaggactctgaccgcgtgcctgttgaagaatgagccggcgactc 139110 Score = 773 bits (390), Expect = 0.0 Identities = 505/539 (93%), Gaps = 7/539 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 109655 gaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacct 109714 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 109715 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 109773 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109774 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 109833 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 109834 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 109893 Query: 245 gaagcggtt-gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| || || ||| ||||||||||||| | |||||||||||||||||||||||||| Sbjct: 109894 gaagcagtgcgaatgctgcaccctagatggtgagagtccagtagccgaaagcatcactag 109953 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109954 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 110013 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 110014 accttgcaaggctaaatactcctgggtgacccatagcgaagtagtaccgtgagggaaggg 110073 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 110074 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 110130 Query: 484 gtgggagggga--aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| || | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 110131 gtgggaggagactactaggactctgaccgcgtgcctgttgaagaatgagccggcgactc 110189
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 771 bits (389), Expect = 0.0 Identities = 464/487 (95%), Gaps = 4/487 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 77 gaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacct 136 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 137 ttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 195 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 tagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 255 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 256 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 315 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||| |||||| |||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 316 gaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagc 375 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 435 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct: 436 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtactaccgtgagggaagggt 495 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||| ||| |||||||| | ||||||||||||| Sbjct: 496 gaaaagaacccccatcggggagtgaaataaaacatgaaaccg---taagctcccaagcag 552 Query: 485 tgggagg 491 ||||||| Sbjct: 553 tgggagg 559
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 771 bits (389), Expect = 0.0 Identities = 464/487 (95%), Gaps = 4/487 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 77 gaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacct 136 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 137 ttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 195 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 tagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 255 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 256 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 315 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||| |||||| |||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 316 gaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagc 375 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 435 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct: 436 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtactaccgtgagggaagggt 495 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| || ||||||||||||| |||||||| | ||||||||||||| Sbjct: 496 gaaaagaacccccatccgggagtgaaatagaacatgaaaccg---taagctcccaagcag 552 Query: 485 tgggagg 491 ||||||| Sbjct: 553 tgggagg 559 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||| ||||||||||||||||||| | |||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactc 619
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 765 bits (386), Expect = 0.0 Identities = 506/539 (93%), Gaps = 9/539 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 1835 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacct 1894 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1895 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaccatct 1953 Query: 125 tagtagccagaggaaaagaaagcaaaag-cgattcccgtagtagcggcgagcgaaatggg 183 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1954 tagtagccagaggaaaagaaagcaaaaggcgattcccgtagtagcggcgagcgaaatggg 2013 Query: 184 agcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagc-gttgtgctgctag 242 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 2014 agcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcggccgtgctgctag 2073 Query: 243 gcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 301 ||||||| | || ||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 2074 gcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcact 2133 Query: 302 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2134 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 2193 Query: 362 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 421 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2194 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 2253 Query: 422 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 481 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 2254 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 2310 Query: 482 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 2311 cagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 2367
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 763 bits (385), Expect = 0.0 Identities = 463/487 (95%), Gaps = 4/487 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 77 gaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacct 136 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 137 ttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 195 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 tagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 255 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 256 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 315 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||| |||||| |||||||||||||| | ||||||||||||||||||||| ||||| Sbjct: 316 gaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatccctagc 375 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 435 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct: 436 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggt 495 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| || ||||||||||||| |||||||| | ||||||||||||| Sbjct: 496 gaaaagaacccccatccgggagtgaaatagaacatgaaaccg---taagctcccaagcag 552 Query: 485 tgggagg 491 ||||||| Sbjct: 553 tgggagg 559 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 502 ctctgaccgcgtgcctgttgaagaatga 529 |||||| ||||||||||||||| ||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatga 608
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 763 bits (385), Expect = 0.0 Identities = 463/487 (95%), Gaps = 4/487 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 77 gaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacct 136 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 137 ttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 195 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 tagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 255 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 256 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 315 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||| |||||| |||||||||||||| | ||||||||||||||||||||| ||||| Sbjct: 316 gaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatccctagc 375 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 435 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct: 436 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggt 495 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||| ||| |||||||| | ||||||||||||| Sbjct: 496 gaaaagaacccccatcggggagtgaaataaaacatgaaaccg---taagctcccaagcag 552 Query: 485 tgggagg 491 ||||||| Sbjct: 553 tgggagg 559 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccg 533 |||||| |||||||||||| || ||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg 612
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 763 bits (385), Expect = 0.0 Identities = 463/487 (95%), Gaps = 4/487 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 77 gaaatgcttcggggggttgaaaataagcgtagatccggagattcccgaataggtcaacct 136 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 137 ttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 195 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 tagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 255 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 256 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 315 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||| |||||| |||||||||||||| | ||||||||||||||||||||| ||||| Sbjct: 316 gaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatccctagc 375 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 435 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct: 436 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggt 495 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 496 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 552 Query: 485 tgggagg 491 ||||||| Sbjct: 553 tgggagg 559 Score = 54.0 bits (27), Expect = 5e-04 Identities = 37/39 (94%), Gaps = 1/39 (2%) Strand = Plus / Plus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||| ||||||||||||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactc 618
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 761 bits (384), Expect = 0.0 Identities = 501/537 (93%), Gaps = 6/537 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||| Sbjct: 86331 gaaatgcttcggggagttgaaaatgagcatagatccggagattcccgaataggttaaccc 86390 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 86391 ttttaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 86449 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 86450 tagtagccagaggaatagaaagcaaaagcgattcccgtagtagtggcgagcgaaatggga 86509 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagc--aatacaagcgttgtgctgctag 242 |||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||| Sbjct: 86510 gcagcctaaaccgtgaaaacggggttgtgggagagcccaatataagctctgtgctgctag 86569 Query: 243 gcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcacta 302 ||||||||||||||| | ||||||||||||| | |||||||||||||||||||||| | Sbjct: 86570 gcgaagcggttgagtcctgcaccctagatggtgagagtccagtagccgaaagcatcattg 86629 Query: 303 gcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 362 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86630 gcttacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 86689 Query: 363 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86690 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 86749 Query: 423 gtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagc 482 |||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||| Sbjct: 86750 gtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagc 86806 Query: 483 agtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 ||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 86807 agtgggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagccggcgact 86863
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 761 bits (384), Expect = 0.0 Identities = 501/537 (93%), Gaps = 6/537 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||| Sbjct: 88417 gaaatgcttcggggagttgaaaattagcatagatccggagattcccgaataggttaacct 88476 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| ||||| ||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 88477 ttttcactgc-tgctgaatccatgggcaggcaagagacaacctggtgaactgaaacatct 88535 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88536 tagtagccagaggaatagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 88595 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagca--atacaagcgttgtgctgctag 242 ||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| Sbjct: 88596 gcagcctaaaccgtgaaaacggggttgtgggagagcacaatataagctctgtgctgctag 88655 Query: 243 gcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcacta 302 ||||||||||||||| | ||||||||||||| | |||||||||||||||||||||| | Sbjct: 88656 gcgaagcggttgagtcctgcaccctagatggtgagagtccagtagccgaaagcatcattg 88715 Query: 303 gcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 362 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88716 gcttacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 88775 Query: 363 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88776 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 88835 Query: 423 gtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagc 482 |||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||| Sbjct: 88836 gtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagc 88892 Query: 483 agtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 ||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 88893 agtgggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagccggcgact 88949
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 755 bits (381), Expect = 0.0 Identities = 501/537 (93%), Gaps = 8/537 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||| Sbjct: 565 gaaatgcttcggggagttgaaaataagccgagatccggagattcccgaatagggcaacct 624 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||| | ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 625 ttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 683 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 684 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 743 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 744 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 803 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||| | || |||||| | ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 804 gaatctgtggagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagc 863 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 864 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 923 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta-ccgtgagggaaagg 423 |||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 924 ccttgcaaggctaaatactcctgggtgaccgatagccaaatagtacccgtgagggaaagg 983 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | ||||| |||||| Sbjct: 984 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaagca 1040 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| || || ||||||||||||||||||||||||||||||||||||||| Sbjct: 1041 gtgggaggagacag---gctctgaccgcgtgcctgttgaagaatgagccggcgactc 1094
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 753 bits (380), Expect = 0.0 Identities = 501/537 (93%), Gaps = 7/537 (1%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||| Sbjct: 142810 gaaatgcttcggggagttgaaaataagcgcagatccggagattcccgaatgggtcaacct 142751 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 142750 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 142692 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142691 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 142632 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 142631 gcagcctaaaccgtgaaaacggggttgtgggagagtcatacaagcgtcgtgctgctaggc 142572 Query: 245 gaagcggttg-agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| | || ||||| ||||||||||||| | |||||||||||||||||||||||||| Sbjct: 142571 gaagcagctggagtgctgcaccctagatggtgagagtccagtagccgaaagcatcactag 142512 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142511 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 142452 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 142451 accttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaggg 142392 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||| Sbjct: 142391 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taggctcccaagca 142335 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 142334 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 142280 Score = 753 bits (380), Expect = 0.0 Identities = 501/537 (93%), Gaps = 7/537 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||| Sbjct: 110518 gaaatgcttcggggagttgaaaataagcgcagatccggagattcccgaatgggtcaacct 110577 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 110578 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 110636 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110637 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 110696 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 110697 gcagcctaaaccgtgaaaacggggttgtgggagagtcatacaagcgtcgtgctgctaggc 110756 Query: 245 gaagcggttg-agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| | || ||||| ||||||||||||| | |||||||||||||||||||||||||| Sbjct: 110757 gaagcagctggagtgctgcaccctagatggtgagagtccagtagccgaaagcatcactag 110816 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110817 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 110876 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 110877 accttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaggg 110936 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||| Sbjct: 110937 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taggctcccaagca 110993 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 110994 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 111048
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 751 bits (379), Expect = 0.0 Identities = 499/536 (93%), Gaps = 6/536 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 4300 gaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggtcaacct 4359 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| |||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 4360 ttcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatct 4418 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4419 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 4478 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 4479 acagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggc 4538 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| | || || ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 4539 gaagcaatcgaatgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagc 4598 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4599 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 4658 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 4659 ccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggt 4718 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 4719 gaaaagaacccctgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 4775 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 4776 tgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 4829
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 751 bits (379), Expect = 0.0 Identities = 499/536 (93%), Gaps = 6/536 (1%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 23625 gaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggtcaacct 23566 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| |||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 23565 ttcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatct 23507 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23506 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 23447 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 23446 acagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggc 23387 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| | || || ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 23386 gaagcaatcgaatgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagc 23327 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23326 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 23267 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 23266 ccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggt 23207 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 23206 gaaaagaacccctgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 23150 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 23149 tgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 23096
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 751 bits (379), Expect = 0.0 Identities = 500/536 (93%), Gaps = 7/536 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 4569 gaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggtcaacct 4628 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| |||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 4629 ttcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatct 4687 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4688 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 4747 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4748 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 4807 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| || || || ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 4808 gaagcagtcgaatgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagc 4867 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| Sbjct: 4868 ttatgctctgacccgagtaacatggggcacgtgaaatcccgtgtgaatcagcaaggacca 4927 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 4928 ccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggt 4987 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||| | ||| ||||||||||||| |||||||| | ||||||||| ||| Sbjct: 4988 gaaaagaacccctggcggggagtgaaatagaacatgaaaccg---taagctcccaa-cag 5043 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 5044 tgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 5097
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 751 bits (379), Expect = 0.0 Identities = 500/536 (93%), Gaps = 7/536 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 4569 gaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggtcaacct 4628 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| |||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 4629 ttcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatct 4687 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4688 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 4747 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4748 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 4807 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| || || || ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 4808 gaagcagtcgaatgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagc 4867 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| Sbjct: 4868 ttatgctctgacccgagtaacatggggcacgtgaaatcccgtgtgaatcagcaaggacca 4927 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 4928 ccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggt 4987 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||| | ||| ||||||||||||| |||||||| | ||||||||| ||| Sbjct: 4988 gaaaagaacccctggcggggagtgaaatagaacatgaaaccg---taagctcccaa-cag 5043 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 5044 tgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 5097
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 749 bits (378), Expect = 0.0 Identities = 492/526 (93%), Gaps = 7/526 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 118 gaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacct 177 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 178 ttcgaactgc-tgctgaatccatgggcagacaagagacaacctggcgaactgaaacatct 236 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 tagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 296 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 297 gcagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggc 356 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||| ||||||| |||||||||||| | ||||||||||||||||||||||||||| Sbjct: 357 gaagcggtgaagtgccgaaccctagatggcgatagtccagtagccgaaagcatcactagc 416 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 476 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 477 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 536 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 ||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 537 gaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 593 Query: 485 tgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatga 529 |||||| | || | |||||||||||||||||||||||||||| Sbjct: 594 ngggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatga 637
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 745 bits (376), Expect = 0.0 Identities = 498/536 (92%), Gaps = 7/536 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||| Sbjct: 77 gaaatgcttcggggagttgaaaataagccgagatccggagattcccgaatagggcaacct 136 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||| | ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 137 ttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 195 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 255 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 256 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 315 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||| | || |||||| | ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 316 gaatctgtggagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagc 375 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 435 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct: 436 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggt 495 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||| ||| |||||||| | ||||| ||||||| Sbjct: 496 gaaaagaacccccatcggggagtgaaataaaacatgaaaccg---taagctctcaagcag 552 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| || || |||||| ||||||||||||||| |||||||||||||||| Sbjct: 553 tgggaggagacag---gctctgaacgcgtgcctgttgaaaaatgagccggcgactc 605
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 737 bits (372), Expect = 0.0 Identities = 499/537 (92%), Gaps = 7/537 (1%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 52617 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacct 52558 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||| Sbjct: 52557 tttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaacatct 52499 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 52498 tagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatggga 52439 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||| |||||||||||||||||||||||||| ||| || |||||||||||| Sbjct: 52438 gcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggc 52379 Query: 245 gaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||| | | |||| ||| |||||||||||||| |||||||||||||||||||||||| ||| Sbjct: 52378 gaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcattag 52319 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 52318 cttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggacc 52259 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| || Sbjct: 52258 accttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaaggg 52199 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| |||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 52198 tgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctcccaagca 52142 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 52141 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 52087 Score = 737 bits (372), Expect = 0.0 Identities = 499/537 (92%), Gaps = 7/537 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 37211 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacct 37270 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||| Sbjct: 37271 tttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaacatct 37329 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 37330 tagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatggga 37389 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||| |||||||||||||||||||||||||| ||| || |||||||||||| Sbjct: 37390 gcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggc 37449 Query: 245 gaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||| | | |||| ||| |||||||||||||| |||||||||||||||||||||||| ||| Sbjct: 37450 gaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcattag 37509 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 37510 cttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggacc 37569 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| || Sbjct: 37570 accttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaaggg 37629 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| |||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 37630 tgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctcccaagca 37686 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 37687 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 37741
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 737 bits (372), Expect = 0.0 Identities = 499/537 (92%), Gaps = 7/537 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 4139 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacct 4198 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||| Sbjct: 4199 tttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaacatct 4257 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 4258 tagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatggga 4317 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||| |||||||||||||||||||||||||| ||| || |||||||||||| Sbjct: 4318 gcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggc 4377 Query: 245 gaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||| | | |||| ||| |||||||||||||| |||||||||||||||||||||||| ||| Sbjct: 4378 gaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcattag 4437 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 4438 cttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggacc 4497 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| || Sbjct: 4498 accttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaaggg 4557 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| |||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 4558 tgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctcccaagca 4614 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 4615 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 4669
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 735 bits (371), Expect = 0.0 Identities = 502/538 (93%), Gaps = 12/538 (2%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 169 gaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacct 228 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 229 ttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 287 Query: 125 tagt-agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 tagtgagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 347 Query: 184 agcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctagg 243 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 348 agcagcctaaaccgtgaaaacggg-ttgtgggagagcaatacaagcgtcgtgctgctagg 406 Query: 244 cgaag-cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcacta 302 ||||| || || ||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 407 cgaagacgcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcacta 466 Query: 303 gcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 362 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 467 gcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcgacaaggac 526 Query: 363 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 527 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagg 586 Query: 423 gtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagc 482 |||||||||| ||||| ||| ||||||||||||| |||||||| | ||||||||||| Sbjct: 587 gtgaaaagaa-ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagc 642 Query: 483 agtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||||| | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 643 agtgggaggcca----gggctctgaccgcgtgcctgttgaagaatgagccggcgactc 696
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 731 bits (369), Expect = 0.0 Identities = 472/502 (94%), Gaps = 7/502 (1%) Strand = Plus / Minus Query: 40 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 99 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 100 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 160 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 220 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 278 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 279 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 214 Query: 339 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 398 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 213 aatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgata 154 Query: 399 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 458 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 153 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 94 Query: 459 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 518 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 93 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 39 Query: 519 ttgaagaatgagccggcgactc 540 |||||||||||||||||||||| Sbjct: 38 ttgaagaatgagccggcgactc 17
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 728 bits (367), Expect = 0.0 Identities = 502/540 (92%), Gaps = 9/540 (1%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaa-ataggtcaacc 63 |||||||||||||||||||||||||||| ||||||||| ||||||| | ||||||||||| Sbjct: 131802 gaaatgcttcggggagttgaaaataagcgtagatccggggattcccgatataggtcaacc 131743 Query: 64 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 123 ||| |||||| ||||||||||| | |||||||||||||||||||| ||||||||||||| Sbjct: 131742 tttcgaactgc-tgctgaatccacgggcaggcaagagacaacctggtgaactgaaacatc 131684 Query: 124 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131683 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 131624 Query: 184 agcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctagg 243 ||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||| Sbjct: 131623 agcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctagg 131564 Query: 244 cgaagcggttgag--tgccgcaccctagatggctaaagtccagtagccgaaagcatcact 301 |||||| | ||| ||| |||||||||||||| | |||||||||||||||||||||||| Sbjct: 131563 cgaagcagcagagaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact 131504 Query: 302 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 361 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131503 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 131444 Query: 362 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 421 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 131443 ccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaag 131384 Query: 422 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 481 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 131383 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 131327 Query: 482 cagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||| || | || ||||||||||||||||||||||||||||||||||||||| Sbjct: 131326 cagtgggaggaggctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcgactc 131268 Score = 728 bits (367), Expect = 0.0 Identities = 502/540 (92%), Gaps = 9/540 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaa-ataggtcaacc 63 |||||||||||||||||||||||||||| ||||||||| ||||||| | ||||||||||| Sbjct: 103592 gaaatgcttcggggagttgaaaataagcgtagatccggggattcccgatataggtcaacc 103651 Query: 64 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 123 ||| |||||| ||||||||||| | |||||||||||||||||||| ||||||||||||| Sbjct: 103652 tttcgaactgc-tgctgaatccacgggcaggcaagagacaacctggtgaactgaaacatc 103710 Query: 124 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103711 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 103770 Query: 184 agcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctagg 243 ||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||| Sbjct: 103771 agcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctagg 103830 Query: 244 cgaagcggttgag--tgccgcaccctagatggctaaagtccagtagccgaaagcatcact 301 |||||| | ||| ||| |||||||||||||| | |||||||||||||||||||||||| Sbjct: 103831 cgaagcagcagagaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact 103890 Query: 302 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 361 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103891 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 103950 Query: 362 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 421 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 103951 ccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaag 104010 Query: 422 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 481 ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||| Sbjct: 104011 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 104067 Query: 482 cagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||| || | || ||||||||||||||||||||||||||||||||||||||| Sbjct: 104068 cagtgggaggaggctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcgactc 104126
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 718 bits (362), Expect = 0.0 Identities = 443/467 (94%), Gaps = 6/467 (1%) Strand = Plus / Plus Query: 75 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 134 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 135 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 195 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 253 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 254 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 313 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 314 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 374 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 433 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 434 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 493 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 377 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 433 Query: 494 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 478
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 716 bits (361), Expect = 0.0 Identities = 498/542 (91%), Gaps = 10/542 (1%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| |||||| |||||||||||||||||||||| ||||||| ||||| Sbjct: 128377 gaaatgcttcggggagctgaaaacaagcatagatccggagattcccgaataggttaacct 128318 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||| |||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 128317 tttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatct 128259 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 128258 tagtagccagaggaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtggga 128199 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagc------aatacaagcgttgtgctg 238 | ||||||||||||||||||||||||||||| |||| ||||||||| |||||||| Sbjct: 128198 gtagcctaaaccgtgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctg 128139 Query: 239 ctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatc 298 ||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||| Sbjct: 128138 ctaggcgaagcggttgagtcccgcaccctagatggcaagagtccagtagccgaaagcatc 128079 Query: 299 actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 358 ||||||| | ||||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 128078 actagctcacgctctaacccaagtagcatggggcacgtggaatcccgtgtgaatcagcaa 128019 Query: 359 ggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 418 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 128018 ggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagcagtaccgtgaggg 127959 Query: 419 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 478 || ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||| Sbjct: 127958 aagggtgaaaagaacccccataggggagtgaaatagaacatgaaaccg---taagctccc 127902 Query: 479 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 538 ||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||||||| Sbjct: 127901 aagcagtgggaggagaattggatctctgaccgcatgcctgttgaggaatgagccggcgac 127842 Query: 539 tc 540 || Sbjct: 127841 tc 127840 Score = 716 bits (361), Expect = 0.0 Identities = 498/542 (91%), Gaps = 10/542 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| |||||| |||||||||||||||||||||| ||||||| ||||| Sbjct: 95070 gaaatgcttcggggagctgaaaacaagcatagatccggagattcccgaataggttaacct 95129 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||| |||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 95130 tttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatct 95188 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 95189 tagtagccagaggaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtggga 95248 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagc------aatacaagcgttgtgctg 238 | ||||||||||||||||||||||||||||| |||| ||||||||| |||||||| Sbjct: 95249 gtagcctaaaccgtgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctg 95308 Query: 239 ctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatc 298 ||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||| Sbjct: 95309 ctaggcgaagcggttgagtcccgcaccctagatggcaagagtccagtagccgaaagcatc 95368 Query: 299 actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 358 ||||||| | ||||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 95369 actagctcacgctctaacccaagtagcatggggcacgtggaatcccgtgtgaatcagcaa 95428 Query: 359 ggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 418 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 95429 ggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagcagtaccgtgaggg 95488 Query: 419 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 478 || ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||| Sbjct: 95489 aagggtgaaaagaacccccataggggagtgaaatagaacatgaaaccg---taagctccc 95545 Query: 479 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 538 ||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||||||| Sbjct: 95546 aagcagtgggaggagaattggatctctgaccgcatgcctgttgaggaatgagccggcgac 95605 Query: 539 tc 540 || Sbjct: 95606 tc 95607
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 712 bits (359), Expect = 0.0 Identities = 462/493 (93%), Gaps = 5/493 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||| Sbjct: 77 gaaatgcttcggggagttgaaaataagccgagatccggagattcccgaatagggcaacct 136 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||| | ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 137 ttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 195 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 255 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 256 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 315 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||| | || |||||| | ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 316 gaatctgtggagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagc 375 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 435 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 436 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 495 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||| ||||| ||| ||||||||| ||| |||||||| | ||||| ||||||| Sbjct: 496 gaaaagaa-ccccatcggggagtgaaataaaacatgaaaccg---taagctctcaagcag 551 Query: 485 tgggaggggaaag 497 ||||||| ||||| Sbjct: 552 tgggaggagaaag 564
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 710 bits (358), Expect = 0.0 Identities = 364/366 (99%) Strand = Plus / Plus Query: 33 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 92 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 93 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 153 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 213 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 273 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 332 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 300 Query: 333 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 360 Query: 393 ccgata 398 |||||| Sbjct: 361 ccgata 366
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 708 bits (357), Expect = 0.0 Identities = 493/535 (92%), Gaps = 5/535 (0%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| |||||||||| |||||||||||||||||| ||||||| ||||| Sbjct: 116140 gaaatgcttcggggagctgaaaataagtatagatccggagattcccgaataggttaacct 116081 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||||||| |||||||| ||| |||| |||||||||||||||||||||||||||||| Sbjct: 116080 ttgaaactgc-tgctgaattcataggcagacaagagacaacctggcgaactgaaacatct 116022 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 116021 tagtagccagaggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatggga 115962 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||| ||||||| |||| | | ||| |||||| |||||||| Sbjct: 115961 acagcctaaaccgtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgctaggc 115903 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| ||||||| | ||||||||||||| ||||||||||| ||||||||| ||||||| Sbjct: 115902 gaagcagttgagtcctgcaccctagatggtgaaagtccagtaaccgaaagcagcactagc 115843 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115842 ttaggctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 115783 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115782 ccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 115723 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 115722 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 115666 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 ||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 115665 tgggaggagaattgaatctctgaccgcgtgcctgttgaagaatgagccggcgact 115611 Score = 708 bits (357), Expect = 0.0 Identities = 493/535 (92%), Gaps = 5/535 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| |||||||||| |||||||||||||||||| ||||||| ||||| Sbjct: 85980 gaaatgcttcggggagctgaaaataagtatagatccggagattcccgaataggttaacct 86039 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||||||| |||||||| ||| |||| |||||||||||||||||||||||||||||| Sbjct: 86040 ttgaaactgc-tgctgaattcataggcagacaagagacaacctggcgaactgaaacatct 86098 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 86099 tagtagccagaggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatggga 86158 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||| ||||||| |||| | | ||| |||||| |||||||| Sbjct: 86159 acagcctaaaccgtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgctaggc 86217 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| ||||||| | ||||||||||||| ||||||||||| ||||||||| ||||||| Sbjct: 86218 gaagcagttgagtcctgcaccctagatggtgaaagtccagtaaccgaaagcagcactagc 86277 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86278 ttaggctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 86337 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86338 ccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 86397 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 86398 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcag 86454 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 ||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 86455 tgggaggagaattgaatctctgaccgcgtgcctgttgaagaatgagccggcgact 86509
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 708 bits (357), Expect = 0.0 Identities = 492/535 (91%), Gaps = 4/535 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| ||||| Sbjct: 70 gaaatgcttcggggagctgaaaataagcatggatccggagattcccgaataggttaacct 129 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||| |||||||| ||| |||| |||||||||||||||||||||||||||||| Sbjct: 130 tttgaactgc-tgctgaattcataggcagacaagagacaacctggcgaactgaaacatct 188 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 189 tagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatggga 248 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 | ||||||||||||||||||||||||||||| |||||| | |||||||| ||||||| Sbjct: 249 gtagcctaaaccgtgaaaacggggttgtgggggagcaaagtaggcgttgtgtcgctaggc 308 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| ||||| | | ||||| ||||||| | |||||||||||||||||||||||||| Sbjct: 309 gaagcagttgaatcctgcaccatagatggtgagagtccagtagccgaaagcatcactagt 368 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 ttatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 428 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 ccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 488 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||||| Sbjct: 489 gaaaagaacccccataggggagtgaaatagaacatgaaaccg---taagctcccaagcag 545 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 ||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 546 tgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgact 600
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 702 bits (354), Expect = 0.0 Identities = 493/536 (91%), Gaps = 5/536 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 2113 gaaatgcttcggggagctgaaaataagcatagatccggagattcccgaataggttaacct 2172 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||| |||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 2173 tttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatct 2231 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2232 tagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatggga 2291 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||| | ||| ||||| |||||||| Sbjct: 2292 ctagcctaaaccgtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggc 2351 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-g 303 ||||| ||||||| | ||||||||||||| | |||||||||||||||||||| || | Sbjct: 2352 gaagcagttgagtcctgcaccctagatggtgagagtccagtagccgaaagcataacaaca 2411 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2412 ctcatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 2471 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2472 accttgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaagg 2531 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 2532 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 2588 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2589 gtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgact 2644
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 702 bits (354), Expect = 0.0 Identities = 493/536 (91%), Gaps = 5/536 (0%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 118080 gaaatgcttcggggagctgaaaataagcatagatccggagattcccgaataggttaacct 118021 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||| |||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 118020 tttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatct 117962 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 117961 tagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatggga 117902 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||| | ||| ||||| |||||||| Sbjct: 117901 ctagcctaaaccgtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggc 117842 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-g 303 ||||| ||||||| | ||||||||||||| | |||||||||||||||||||| || | Sbjct: 117841 gaagcagttgagtcctgcaccctagatggtgagagtccagtagccgaaagcataacaaca 117782 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117781 ctcatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 117722 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 117721 accttgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaagg 117662 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 117661 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 117605 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 117604 gtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgact 117549 Score = 702 bits (354), Expect = 0.0 Identities = 493/536 (91%), Gaps = 5/536 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 90022 gaaatgcttcggggagctgaaaataagcatagatccggagattcccgaataggttaacct 90081 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||| |||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 90082 tttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatct 90140 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 90141 tagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatggga 90200 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||| | ||| ||||| |||||||| Sbjct: 90201 ctagcctaaaccgtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggc 90260 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-g 303 ||||| ||||||| | ||||||||||||| | |||||||||||||||||||| || | Sbjct: 90261 gaagcagttgagtcctgcaccctagatggtgagagtccagtagccgaaagcataacaaca 90320 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90321 ctcatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 90380 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 90381 accttgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaagg 90440 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 90441 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 90497 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 90498 gtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgact 90553
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 692 bits (349), Expect = 0.0 Identities = 490/535 (91%), Gaps = 4/535 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| |||||| |||||||||||||||||||||| ||||||| ||||| Sbjct: 3959 gaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaacct 4018 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||| |||||||| || || | |||||||||||| |||||||||||||||||| Sbjct: 4019 tttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatct 4077 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4078 tagtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 4137 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 4138 gtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggt 4197 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| ||||||| | |||||| |||||| | ||||||||||||||||||| |||| | Sbjct: 4198 gaagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtc 4257 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| || | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4258 ttacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 4317 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4318 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 4377 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| ||||| || | |||| |||||||| Sbjct: 4378 gaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcag 4434 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 || |||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4435 tgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgact 4489
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 692 bits (349), Expect = 0.0 Identities = 490/535 (91%), Gaps = 4/535 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| |||||||||| |||||||||||||||||| ||||||| ||||| Sbjct: 53 gaaatgcttcggggagctgaaaataagtatagatccggagattcccgaataggttaacct 112 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 113 tttaaactgc-tgctgaatccataggcgggcaagagacaacctggcgaactgaaacatct 171 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||| |||||| |||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 172 tagtagccggaggaagagaaagcaaaagcgattctcgtagtagcggcgagcgaaacggga 231 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||| |||| | | |||| |||| |||||||| Sbjct: 232 gcagcctaaaccgtgaaaacggggttgtgggggagctaaagaagcattgtattgctaggc 291 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| ||||||| | ||||||||||||| | ||||||||| |||||||||| || ||| Sbjct: 292 gaagcagttgagtcctgcaccctagatggtgagagtccagtaaccgaaagcattacaagc 351 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 || ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 352 ttgggctctaacccgagtaacatggggcacgtggaatcccgtgtgaatcagcaaggacca 411 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 412 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 471 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| |||||||| | |||| |||||||| Sbjct: 472 gaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcag 528 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 529 tgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgact 583
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 692 bits (349), Expect = 0.0 Identities = 490/535 (91%), Gaps = 4/535 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| |||||| |||||||||||||||||||||| ||||||| ||||| Sbjct: 69 gaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaacct 128 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||| |||||||| || || | |||||||||||| |||||||||||||||||| Sbjct: 129 tttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatct 187 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 tagtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 247 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 248 gtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggt 307 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| ||||||| | |||||| |||||| | ||||||||||||||||||| |||| | Sbjct: 308 gaagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtc 367 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| || | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 ttacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 427 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 487 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| ||||| || | |||| |||||||| Sbjct: 488 gaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcag 544 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 || |||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 tgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgact 599
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 692 bits (349), Expect = 0.0 Identities = 490/535 (91%), Gaps = 4/535 (0%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| |||||| |||||||||||||||||||||| ||||||| ||||| Sbjct: 151176 gaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaacct 151117 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||| |||||||| || || | |||||||||||| |||||||||||||||||| Sbjct: 151116 tttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatct 151058 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151057 tagtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 150998 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 150997 gtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggt 150938 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| ||||||| | |||||| |||||| | ||||||||||||||||||| |||| | Sbjct: 150937 gaagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtc 150878 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| || | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150877 ttacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 150818 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150817 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 150758 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| ||||| || | |||| |||||||| Sbjct: 150757 gaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcag 150701 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 || |||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 150700 tgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgact 150646 Score = 692 bits (349), Expect = 0.0 Identities = 490/535 (91%), Gaps = 4/535 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| |||||| |||||||||||||||||||||| ||||||| ||||| Sbjct: 117490 gaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaacct 117549 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||| |||||||| || || | |||||||||||| |||||||||||||||||| Sbjct: 117550 tttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatct 117608 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117609 tagtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 117668 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 117669 gtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggt 117728 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| ||||||| | |||||| |||||| | ||||||||||||||||||| |||| | Sbjct: 117729 gaagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtc 117788 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| || | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117789 ttacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 117848 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117849 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 117908 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| ||||| || | |||| |||||||| Sbjct: 117909 gaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcag 117965 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 || |||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 117966 tgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgact 118020
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 692 bits (349), Expect = 0.0 Identities = 490/535 (91%), Gaps = 4/535 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| |||||| |||||||||||||||||||||| ||||||| ||||| Sbjct: 69 gaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaacct 128 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||| |||||||| || || | |||||||||||| |||||||||||||||||| Sbjct: 129 tttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatct 187 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 tagtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 247 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 248 gtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggt 307 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| ||||||| | |||||| |||||| | ||||||||||||||||||| |||| | Sbjct: 308 gaagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtc 367 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| || | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 ttacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 427 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 487 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 |||||||||||||| ||| ||||||||||||| ||||| || | |||| |||||||| Sbjct: 488 gaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcag 544 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 || |||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 tgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgact 599
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 690 bits (348), Expect = 0.0 Identities = 493/539 (91%), Gaps = 8/539 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| |||||||||| || ||||||||||||||| ||||||| ||||| Sbjct: 70 gaaatgcttcggggagctgaaaataagtatggatccggagattcccgaataggttaacct 129 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 |||||||||| |||||||| ||| || |||||||||||||| ||||||||||||||||| Sbjct: 130 tttaaactgc-tgctgaattcataggcgggcaagagacaacccggcgaactgaaacatct 188 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 189 tagtagccggaggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatggga 248 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaa----gcgttgtgctgct 240 || |||||||||||||||||||||||||||| |||| |||||| || ||| |||||| Sbjct: 249 gcggcctaaaccgtgaaaacggggttgtgggggagctatacaaataagcattgcgctgct 308 Query: 241 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 300 ||||||||| ||||||| | |||||| |||||| | ||||||||| |||||||||| || Sbjct: 309 aggcgaagcagttgagtcctgcaccccagatggtgagagtccagtaaccgaaagcataac 368 Query: 301 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 360 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 aatcttatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 428 Query: 361 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 488 Query: 421 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 480 |||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||| Sbjct: 489 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 545 Query: 481 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 gcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgact 604
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 686 bits (346), Expect = 0.0 Identities = 414/433 (95%), Gaps = 4/433 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 66 gaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacct 125 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 126 ttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 184 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 244 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 245 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 304 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||| || | | |||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 305 gaagcggtggaatactgcaccctagatggcgatagtccagtagccgaaagcatcactagc 364 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 424 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 ||||||||||||||||||| | |||||||||||| |||||||||||||||||||| ||| Sbjct: 425 ccttgcaaggctaaatactac--ggtgaccgatagtgaagtagtaccgtgagggaagggt 482 Query: 425 gaaaagaaccccc 437 | ||||||||||| Sbjct: 483 g-aaagaaccccc 494
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 680 bits (343), Expect = 0.0 Identities = 404/423 (95%), Gaps = 1/423 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 46 gaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacct 105 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 106 ttcaaactgc-tgccgaatccatgggcaggcaagagacaacctggcgaactgaaacatct 164 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 165 tagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 224 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 225 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggc 284 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||||| || ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 285 gaagcggccgaacaccgcaccctagatggtgggagtccagtagccgaaagcatcactagc 344 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 345 ttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 404 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 405 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggt 464 Query: 425 gaa 427 ||| Sbjct: 465 gaa 467
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 678 bits (342), Expect = 0.0 Identities = 490/536 (91%), Gaps = 5/536 (0%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| ||||||| ||||| ||||||||||||||| ||||||| ||||| Sbjct: 146490 gaaatgcttcggggagctgaaaatgagcatggatccggagattcccgaataggttaacct 146431 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||| | |||||||| ||| |||||| |||||||||||||||||||||||||||| Sbjct: 146430 tttgaactac-tgctgaattcataggcaggcgagagacaacctggcgaactgaaacatct 146372 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146371 tagtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 146312 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 | |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 146311 gtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggc 146252 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| ||||||| | | ||||||||||| | |||||||||||||||||||||||| || Sbjct: 146251 gaagcagttgagtcctgtaccctagatggtgagagtccagtagccgaaagcatcactggc 146192 Query: 305 -ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 146191 tttatgctccaacccgagtagcatggggcacgcagaatcccgtgtgaatcagcaaggacc 146132 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 146131 accttgtaaggctaaatactcctgggtgaccgatagcaaagtagtaccgtgagggaaagg 146072 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||| Sbjct: 146071 tgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taggctcccaagca 146015 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||| ||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 146014 gtgggaggagaatcggatccctgaccgcgtgcctgttgaagaatgagccggcgact 145959 Score = 678 bits (342), Expect = 0.0 Identities = 490/536 (91%), Gaps = 5/536 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| ||||||| ||||| ||||||||||||||| ||||||| ||||| Sbjct: 111972 gaaatgcttcggggagctgaaaatgagcatggatccggagattcccgaataggttaacct 112031 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||| | |||||||| ||| |||||| |||||||||||||||||||||||||||| Sbjct: 112032 tttgaactac-tgctgaattcataggcaggcgagagacaacctggcgaactgaaacatct 112090 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112091 tagtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 112150 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 | |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 112151 gtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggc 112210 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| ||||||| | | ||||||||||| | |||||||||||||||||||||||| || Sbjct: 112211 gaagcagttgagtcctgtaccctagatggtgagagtccagtagccgaaagcatcactggc 112270 Query: 305 -ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 112271 tttatgctccaacccgagtagcatggggcacgcagaatcccgtgtgaatcagcaaggacc 112330 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 112331 accttgtaaggctaaatactcctgggtgaccgatagcaaagtagtaccgtgagggaaagg 112390 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 |||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||| Sbjct: 112391 tgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taggctcccaagca 112447 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||| ||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 112448 gtgggaggagaatcggatccctgaccgcgtgcctgttgaagaatgagccggcgact 112503
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 674 bits (340), Expect = 0.0 Identities = 497/537 (92%), Gaps = 18/537 (3%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| || Sbjct: 664 gaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtca--ct 607 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 | |||| |||||||||||||| |||||||||||||| || |||| ||| |||||| Sbjct: 606 t---gactg-ctgctgaatccatg-gcaggcaagagaca--ct-gcga--tga-acatct 558 Query: 125 tagtagccagaggaaaagaaa-gcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 557 tagtagccagaggaaaagaaaggcaaaagcgattcccgtagtagcggcgagcgaaatggg 498 Query: 184 agcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctagg 243 ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 497 agcagcctaaaccgtgaaaacggggttgtgggagagcgatacaagcgtcgtgctgctagg 438 Query: 244 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||||||| |||||| |||||||||||||| | |||||||||||||||||||||||||| Sbjct: 437 cgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcactag 378 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 318 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 317 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaggg 258 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||| Sbjct: 257 tgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagca 201 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | | | ||||||||||||||||||||||||||||||||||||||| Sbjct: 200 gtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactc 145
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 662 bits (334), Expect = 0.0 Identities = 373/387 (96%), Gaps = 13/387 (3%) Strand = Plus / Minus Query: 159 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 218 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 219 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 278 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 279 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 338 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 339 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 393 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 394 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 454 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 513 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 514 gcctgttgaagaatgagccggcgactc 540 ||||||||||||||||||||||||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactc 75100 Score = 307 bits (155), Expect = 2e-80 Identities = 158/159 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75643 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 75584 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75583 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 75524 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgta 163 ||||||||||||||||||||||||||||||||||||||| Sbjct: 75523 tagtagccagaggaaaagaaagcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 90 gcaggcaagagacaacctggcgaactgaaacatcttagta 129 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 390 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 436 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 662 bits (334), Expect = 0.0 Identities = 373/387 (96%), Gaps = 13/387 (3%) Strand = Plus / Plus Query: 159 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 218 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 219 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 278 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 279 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 338 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 339 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 393 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 394 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 454 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 513 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 514 gcctgttgaagaatgagccggcgactc 540 ||||||||||||||||||||||||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactc 382438 Score = 307 bits (155), Expect = 2e-80 Identities = 158/159 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381895 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 381954 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381955 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 382014 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgta 163 ||||||||||||||||||||||||||||||||||||||| Sbjct: 382015 tagtagccagaggaaaagaaagcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 90 gcaggcaagagacaacctggcgaactgaaacatcttagta 129 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 90 gcaggcaagagacaacctggcgaactgaaacatcttagta 129 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 390 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 436 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 390 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 436 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 662 bits (334), Expect = 0.0 Identities = 373/387 (96%), Gaps = 13/387 (3%) Strand = Plus / Minus Query: 159 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 218 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 219 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 278 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 279 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 338 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 339 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 393 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 394 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 454 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 513 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 514 gcctgttgaagaatgagccggcgactc 540 ||||||||||||||||||||||||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactc 113191 Score = 307 bits (155), Expect = 2e-80 Identities = 158/159 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113734 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 113675 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113674 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 113615 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgta 163 ||||||||||||||||||||||||||||||||||||||| Sbjct: 113614 tagtagccagaggaaaagaaagcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 90 gcaggcaagagacaacctggcgaactgaaacatcttagta 129 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 390 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 436 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 662 bits (334), Expect = 0.0 Identities = 373/387 (96%), Gaps = 13/387 (3%) Strand = Plus / Minus Query: 159 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 218 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 219 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 278 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 279 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 338 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 339 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 393 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 394 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 454 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 513 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 514 gcctgttgaagaatgagccggcgactc 540 ||||||||||||||||||||||||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactc 367873 Score = 662 bits (334), Expect = 0.0 Identities = 373/387 (96%), Gaps = 13/387 (3%) Strand = Plus / Minus Query: 159 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 218 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 219 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 278 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 279 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 338 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 339 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 393 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 394 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 454 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 513 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 514 gcctgttgaagaatgagccggcgactc 540 ||||||||||||||||||||||||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactc 184478 Score = 307 bits (155), Expect = 2e-80 Identities = 158/159 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368416 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 368357 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368356 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 368297 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgta 163 ||||||||||||||||||||||||||||||||||||||| Sbjct: 368296 tagtagccagaggaaaagaaagcaaaagcgattcccgta 368258 Score = 307 bits (155), Expect = 2e-80 Identities = 158/159 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185021 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 184962 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184961 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 184902 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgta 163 ||||||||||||||||||||||||||||||||||||||| Sbjct: 184901 tagtagccagaggaaaagaaagcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 90 gcaggcaagagacaacctggcgaactgaaacatcttagta 129 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 390 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 436 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 638 bits (322), Expect = e-180 Identities = 334/338 (98%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 123401 gaaatgcttcggggagttgaaattaagcatagatccggagattcccaaataggtcaacct 123342 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123341 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 123282 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123281 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 123222 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123221 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 123162 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123161 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 123102 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatc 342 ||| |||||| ||||||||||||||||||||||||||| Sbjct: 123101 ttacgctctgccccgagtagcatggggcacgtggaatc 123064 Score = 402 bits (203), Expect = e-109 Identities = 206/207 (99%) Strand = Plus / Minus Query: 334 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 394 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 454 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 514 gcctgttgaagaatgagccggcgactc 540 ||||||||||||||||||||| ||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactc 122614
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 638 bits (322), Expect = e-180 Identities = 334/338 (98%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 12825942 gaaatgcttcggggagttgaaattaagcatagatccggagattcccaaataggtcaacct 12825883 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825882 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 12825823 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825822 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 12825763 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825762 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 12825703 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825702 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 12825643 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatc 342 ||| |||||| ||||||||||||||||||||||||||| Sbjct: 12825642 ttacgctctgccccgagtagcatggggcacgtggaatc 12825605 Score = 402 bits (203), Expect = e-109 Identities = 206/207 (99%) Strand = Plus / Minus Query: 334 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 394 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 454 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 514 gcctgttgaagaatgagccggcgactc 540 ||||||||||||||||||||| ||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactc 12825155 Score = 87.7 bits (44), Expect = 3e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 279 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 338 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 618 bits (312), Expect = e-174 Identities = 485/537 (90%), Gaps = 8/537 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 ||||||||||||||||||||||||||||||||||||| |||||||| ||| || ||||| Sbjct: 69 gaaatgcttcggggagttgaaaataagcatagatccgtagattcccgaatggggtaacct 128 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || | ||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 129 ttcacactgc-tgctcaatccatgggcaggaaagagacaacctggcgaactgaaacatct 187 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 188 tagtagccagaggaaaataaagcaaaagcgattcccatagtagcggcgagcgaaatggga 247 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 |||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 248 tcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggc 307 Query: 245 gaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| | || | || |||||||||||||| |||||||||||| | |||||||||||| Sbjct: 308 gaagcagcttaaatgatgcaccctagatggcgaaagtccagtagtcaaaagcatcactac 367 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 || |||||||||||||||||||||| |||||| ||||||||||||||||||||||||| Sbjct: 368 gttgcgctctgacccgagtagcatgggacacgtgtaatcccgtgtgaatcagcaaggacc 427 Query: 364 accttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaagg 423 ||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||| || Sbjct: 428 accttgcaaggctaaatactcctgggtaaccaatagtaaagtagtaccgtgagggaaggg 487 Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||| ||||| |||| ||||||||||||| |||||||| | |||| ||||||| Sbjct: 488 tgaaaagaa-ccccattggggagtgaaatagaacatgaaaccg---taagctaccaagca 543 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| | || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 544 gtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 598
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 60 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 119 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 120 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 180 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 239 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 240 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 299 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 300 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 359 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 360 gaccaccttgcaaggctaaatactcctgggtg 391 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 523 bits (264), Expect = e-145 Identities = 267/268 (99%) Strand = Plus / Plus Query: 273 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 332 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 333 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 393 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 453 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 513 tgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactc 268
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 486 bits (245), Expect = e-134 Identities = 463/535 (86%), Gaps = 3/535 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| ||||||| | |||||||||||||||||| ||||||| ||||| Sbjct: 143988 gaaatgcttcggggagccgaaaataggtatagatccggagattcccgaataggttaacct 144047 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 | |||||||||||||||| || ||||| |||||||||||| ||||||||||||||||| Sbjct: 144048 tccaaactgcctgctgaattcagaagcagacaagagacaacccggcgaactgaaacatct 144107 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||| ||||| | |||||||||||||||||| ||||| ||||||| |||| |||| Sbjct: 144108 tagtagccggaggaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacggga 144167 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||| ||||||||||||||||| || || | || | |||||| Sbjct: 144168 agagcctaaaccgtgaagacggggttgtgggagagtgatgagggcttcgttttactaggc 144227 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| ||||||||| |||||| |||||| | ||||||||||||| ||| | ||||| Sbjct: 144228 gaagcagttgagtgctgcaccccagatggtgatagtccagtagccggaagtacagctagc 144287 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 | | |||| |||| |||||||||||||||| |||||||||||||||||| ||||||| Sbjct: 144288 tcacgctccaacccaagtagcatggggcacgcaaaatcccgtgtgaatcagcgaggacca 144347 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 ||||| ||||||||||| ||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 144348 ccttgtaaggctaaatattcctgagtgaccgatagcgaagcagtaccgtgagggaaaggt 144407 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 ||||||||||||| ||| ||||||||||||| |||||||| |||||||||||||| Sbjct: 144408 gaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---cgagctcccaagcag 144464 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 ||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 144465 tgggaggagaatgagatctctaaccgcgtgcctgttgaagaatgagccggcgact 144519 Score = 486 bits (245), Expect = e-134 Identities = 463/535 (86%), Gaps = 3/535 (0%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| ||||||| | |||||||||||||||||| ||||||| ||||| Sbjct: 88863 gaaatgcttcggggagccgaaaataggtatagatccggagattcccgaataggttaacct 88804 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 | |||||||||||||||| || ||||| |||||||||||| ||||||||||||||||| Sbjct: 88803 tccaaactgcctgctgaattcagaagcagacaagagacaacccggcgaactgaaacatct 88744 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||| ||||| | |||||||||||||||||| ||||| ||||||| |||| |||| Sbjct: 88743 tagtagccggaggaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacggga 88684 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 ||||||||||||||| ||||||||||||||||| || || | || | |||||| Sbjct: 88683 agagcctaaaccgtgaagacggggttgtgggagagtgatgagggcttcgttttactaggc 88624 Query: 245 gaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc 304 ||||| ||||||||| |||||| |||||| | ||||||||||||| ||| | ||||| Sbjct: 88623 gaagcagttgagtgctgcaccccagatggtgatagtccagtagccggaagtacagctagc 88564 Query: 305 ttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacca 364 | | |||| |||| |||||||||||||||| |||||||||||||||||| ||||||| Sbjct: 88563 tcacgctccaacccaagtagcatggggcacgcaaaatcccgtgtgaatcagcgaggacca 88504 Query: 365 ccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggt 424 ||||| ||||||||||| ||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 88503 ccttgtaaggctaaatattcctgagtgaccgatagcgaagcagtaccgtgagggaaaggt 88444 Query: 425 gaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcag 484 ||||||||||||| ||| ||||||||||||| |||||||| |||||||||||||| Sbjct: 88443 gaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---cgagctcccaagcag 88387 Query: 485 tgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 ||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 88386 tgggaggagaatgagatctctaaccgcgtgcctgttgaagaatgagccggcgact 88332
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 480 bits (242), Expect = e-132 Identities = 332/357 (92%), Gaps = 5/357 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaa-ataggtcaacc 63 |||||||||||||||||||||||||||| ||||||||| ||||||| | ||||||||||| Sbjct: 2668 gaaatgcttcggggagttgaaaataagcgtagatccggggattcccgatataggtcaacc 2727 Query: 64 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 123 ||| |||||| ||||||||||| | |||||||||||||||| ||| ||||||||||||| Sbjct: 2728 tttcgaactgc-tgctgaatccacgggcaggcaagagacaacttggtgaactgaaacatc 2786 Query: 124 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2787 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 2846 Query: 184 agcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctagg 243 ||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||| Sbjct: 2847 agcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctagg 2906 Query: 244 cgaagcggttgag--tgccgcaccctagatggctaaagtccagtagccgaaagcatcact 301 |||||| | ||| ||| |||||||||||||| | |||||||||||||||||||||||| Sbjct: 2907 cgaagcagcagagaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact 2966 Query: 302 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 358 ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2967 -gcttacgctctgacccgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 480 bits (242), Expect = e-132 Identities = 332/357 (92%), Gaps = 5/357 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaa-ataggtcaacc 63 |||||||||||||||||||||||||||| ||||||||| ||||||| | ||||||||||| Sbjct: 923 gaaatgcttcggggagttgaaaataagcgtagatccggggattcccgatataggtcaacc 982 Query: 64 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 123 ||| |||||| ||||||||||| | |||||||||||||||| ||| ||||||||||||| Sbjct: 983 tttcgaactgc-tgctgaatccacgggcaggcaagagacaacttggtgaactgaaacatc 1041 Query: 124 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1042 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 1101 Query: 184 agcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctagg 243 ||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||| Sbjct: 1102 agcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctagg 1161 Query: 244 cgaagcggttgag--tgccgcaccctagatggctaaagtccagtagccgaaagcatcact 301 |||||| | ||| ||| |||||||||||||| | |||||||||||||||||||||||| Sbjct: 1162 cgaagcagcagagaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact 1221 Query: 302 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 358 ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1222 -gcttacgctctgacccgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 1277
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 186 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 246 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 231 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 186 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 246 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 231 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 432 bits (218), Expect = e-118 Identities = 292/314 (92%), Gaps = 2/314 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||| Sbjct: 177100 gaaatgcttcggggagttgaaaatcagcatagatccggagattcccgaatagggcaacct 177159 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||||| |||||||||||| |||| |||||||||||| |||| Sbjct: 177160 ttcgaactgc-tgctgaatccatgggcaggcaagagagaaccaggcgaactgaaagatct 177218 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 177219 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgggcgaaatggga 177278 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggc 244 || |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 177279 gctgcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgcagctaggc 177338 Query: 245 gaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 ||||| | || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 177339 gaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 177398 Query: 304 cttatgctctgacc 317 |||| ||||||||| Sbjct: 177399 cttaggctctgacc 177412 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 177443 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 390 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 390 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 109 gcgaactgaaacatcttagtagc 131 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 109 gcgaactgaaacatcttagtagc 131 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 428 bits (216), Expect = e-117 Identities = 394/451 (87%), Gaps = 8/451 (1%) Strand = Plus / Minus Query: 93 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 152 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 139114 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 139055 Query: 153 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 212 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 139054 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 138995 Query: 213 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 268 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 138994 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 138936 Query: 269 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 328 || || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 138935 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 138876 Query: 329 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 388 ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||| Sbjct: 138875 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 138816 Query: 389 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 448 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 138815 gtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 138756 Query: 449 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 508 ||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||||| Sbjct: 138755 aaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgac 138699 Query: 509 cgcgtgcctgttgaagaatgagccggcgact 539 ||||||||||||||||||||||||||||||| Sbjct: 138698 cgcgtgcctgttgaagaatgagccggcgact 138668 Score = 428 bits (216), Expect = e-117 Identities = 394/451 (87%), Gaps = 8/451 (1%) Strand = Plus / Plus Query: 93 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 152 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 82763 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 82822 Query: 153 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 212 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 82823 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 82882 Query: 213 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 268 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 82883 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 82941 Query: 269 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 328 || || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 82942 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 83001 Query: 329 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 388 ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||| Sbjct: 83002 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 83061 Query: 389 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 448 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 83062 gtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 83121 Query: 449 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 508 ||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||||| Sbjct: 83122 aaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgac 83178 Query: 509 cgcgtgcctgttgaagaatgagccggcgact 539 ||||||||||||||||||||||||||||||| Sbjct: 83179 cgcgtgcctgttgaagaatgagccggcgact 83209
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 424 bits (214), Expect = e-115 Identities = 217/218 (99%) Strand = Plus / Plus Query: 323 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 383 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 443 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 502 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 503 tctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactc 218
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 55 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 114 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 115 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 174 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 175 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 234 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 235 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 294 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 295 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 354 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 355 gcaaggaccaccttgcaag 373 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 382 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 441 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 442 ggtagtgaaatagaacgtgaaacc 465 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||| ||| ||||||||||||||| |||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactc 3211
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 408 bits (206), Expect = e-111 Identities = 307/340 (90%), Gaps = 3/340 (0%) Strand = Plus / Minus Query: 200 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 259 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 260 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 319 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 320 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 380 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 439 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 440 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 499 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 500 atctctgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgact 5948 Score = 250 bits (126), Expect = 4e-63 Identities = 179/194 (92%), Gaps = 2/194 (1%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 ||||||||||||||||||| || | |||||||||||||||||||| ||||||| ||||| Sbjct: 6506 gaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggttaacct 6448 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 ||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||||||||| Sbjct: 6447 tttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaaacatct 6389 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6388 tagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 6329 Query: 185 gcagcctaaaccgt 198 |||||||||||||| Sbjct: 6328 gcagcctaaaccgt 6315
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 152 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 211 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 212 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 270 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 271 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 330 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 331 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 390 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 391 gaccgata 398 |||||||| Sbjct: 241 gaccgata 248
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 400 bits (202), Expect = e-108 Identities = 202/202 (100%) Strand = Plus / Plus Query: 339 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 399 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 459 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 519 ttgaagaatgagccggcgactc 540 |||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactc 202
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 387 bits (195), Expect = e-104 Identities = 249/265 (93%), Gaps = 4/265 (1%) Strand = Plus / Plus Query: 276 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 335 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 336 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 396 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 455 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 456 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 515 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 516 ctgttgaagaatgagccggcgactc 540 ||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactc 263
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 261 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 320 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 321 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 380 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 381 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 440 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 441 gggtagtgaaatagaacgtgaaaccgt 467 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 337 bits (170), Expect = 2e-89 Identities = 201/210 (95%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 79701 gaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggtcaacct 79642 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| |||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 79641 ttcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatct 79583 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79582 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 79523 Query: 185 gcagcctaaaccgtgaaaacggggttgtgg 214 ||||||||||||||||||||||||||||| Sbjct: 79522 acagcctaaaccgtgaaaacggggttgtgg 79493
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 333 bits (168), Expect = 4e-88 Identities = 453/538 (84%), Gaps = 15/538 (2%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 63 ||||||||| |||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgctttggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 64 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 123 ||| |||||| |||| | |||||| |||| ||||||| ||||||| ||||||||||||| Sbjct: 128 ttt--aactgc-tgcttattccatg-gcagacaagaga-aacctggtgaactgaaacatc 182 Query: 124 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 |||||||||||||||||| |||||||||| |||||| |||||| ||| | |||| ||| Sbjct: 183 ttagtagccagaggaaaataaagcaaaagttattcccatagtagtggcaaatgaaaaggg 242 Query: 184 agcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctagg 243 | ||||||||| || |||| ||||||| || ||||||| ||| || || |||||| Sbjct: 243 aacagcctaaatcgctaaaatggggttgggg---agcaataaaagtattttgttgctaga 299 Query: 244 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 || || || |||| | | ||||||||||| | |||||||||| |||| |||| ||| Sbjct: 300 cggagtagtggagttctgaaccctagatggtgagagtccagtagtataaagtatcattag 359 Query: 304 cttatgctctga-cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 362 |||||||| | | ||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 360 cttatgcttttaacccgagtagcatgggacatatggaatcccgtgtgaatcagcaaggac 419 Query: 363 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 422 ||||||| |||||||||||||| ||||||||| |||| |||||||||||||||||||| | Sbjct: 420 caccttgaaaggctaaatactcttgggtgaccaatagtgaagtagtaccgtgagggaagg 479 Query: 423 gtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagc 482 |||||||||||||||| |||| |||||| |||||| ||||| | | ||| |||||| Sbjct: 480 gtgaaaagaacccccattggggagtgaactagaacatgaaaac---atatgctaccaagc 536 Query: 483 agtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||||| || || | |||||||| |||||| ||||||||||||| ||||||||| Sbjct: 537 agtgggaggagacaggg--ctctgaccacgtgcccgttgaagaatgagtcggcgactc 592
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 319 bits (161), Expect = 5e-84 Identities = 164/165 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75835 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 75894 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75895 tttaaactgcctgcggaatccatgagcaggcaagagacaacctggcgaactgaaacatct 75954 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 169 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75955 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 75999 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 390 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 436 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 390 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 436 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 ggcgaactgaaacatcttag 127 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 291 bits (147), Expect = 1e-75 Identities = 206/225 (91%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 315 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 374 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 375 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 434 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 435 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 494 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 495 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgact 599 Score = 226 bits (114), Expect = 6e-56 Identities = 174/194 (89%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| ||| || |||||| ||||||||||| ||| |||||| ||||| Sbjct: 57 gaaatgcttcggggagctgagaacaagcattgatccggagatgcccgaataggggaacct 116 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||||||||||| || | ||||||||||||||||||||||||||||||||| Sbjct: 117 atttgactgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatct 176 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 177 tagtagccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatggga 236 Query: 185 gcagcctaaaccgt 198 ||||||||||||| Sbjct: 237 acagcctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 291 bits (147), Expect = 1e-75 Identities = 206/225 (91%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 315 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 374 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 375 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 434 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 435 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 494 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 495 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgact 612 Score = 226 bits (114), Expect = 6e-56 Identities = 174/194 (89%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| ||| || |||||| ||||||||||| ||| |||||| ||||| Sbjct: 70 gaaatgcttcggggagctgagaacaagcattgatccggagatgcccgaataggggaacct 129 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||||||||||| || | ||||||||||||||||||||||||||||||||| Sbjct: 130 atttgactgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatct 189 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 190 tagtagccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatggga 249 Query: 185 gcagcctaaaccgt 198 ||||||||||||| Sbjct: 250 acagcctaaaccgt 263
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 289 bits (146), Expect = 5e-75 Identities = 205/224 (91%), Gaps = 3/224 (1%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 495 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 496 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 | |||||||||||||||||||||||||||||||||||||||| Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgact 716 Score = 216 bits (109), Expect = 6e-53 Identities = 172/193 (89%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 ||||||||||||| || ||| || |||||| ||||||||||| ||| |||||| ||||| Sbjct: 174 gaaatgcttcgggaagctgagaacaagcattgatccggagatgcccgaataggggaacct 233 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||||||||||| || | ||||||||||||||||||||||||||||||||| Sbjct: 234 atttgactgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatct 293 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 294 tagtagccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatggga 353 Query: 185 gcagcctaaaccg 197 |||||||||||| Sbjct: 354 acagcctaaaccg 366
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 269 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 327 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 328 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 387 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 388 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 447 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 448 gaaatagaacgtgaaaccgtgctgagctcc 477 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 269 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 327 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 328 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 387 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 388 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 447 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 448 gaaatagaacgtgaaaccgtgctgagctcc 477 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 269 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 327 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 328 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 387 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 388 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 447 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 448 gaaatagaacgtgaaaccgtgctgagctcc 477 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 470 tgagctcccaagcagtgggaggggaaagtgatc 502 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 269 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 327 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 328 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 387 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 388 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 447 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 448 gaaatagaacgtgaaaccgtgctgagctcc 477 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 470 tgagctcccaagcagtgggaggggaaagtgatc 502 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 280 bits (141), Expect = 5e-72 Identities = 224/250 (89%), Gaps = 5/250 (2%) Strand = Plus / Plus Query: 291 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 350 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 351 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 410 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 411 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 470 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 471 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 530 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 531 ccggcgactc 540 |||||||||| Sbjct: 608 ccggcgactc 617 Score = 133 bits (67), Expect = 7e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 90 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 149 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 150 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 209 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 210 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 269 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 270 a 270 | Sbjct: 325 a 325
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 276 bits (139), Expect = 7e-71 Identities = 204/225 (90%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 315 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 374 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 375 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 434 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 435 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 494 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 495 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 | |||||||||||||||||||||||||||||||||||||||| Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 Score = 168 bits (85), Expect = 1e-38 Identities = 143/161 (88%), Gaps = 1/161 (0%) Strand = Plus / Plus Query: 36 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 95 ||||||||||| ||| |||||| ||||| |||||||| |||||||| || |||| | Sbjct: 56 gatccggagatccccgaatagggtaacctaataaactgc-tgctgaatatataggcagac 114 Query: 96 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 155 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115 gagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 174 Query: 156 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 196 ||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 175 ttccctcagtagtggcgagcgaaatgggaacagcctaaacc 215
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 264 bits (133), Expect = 3e-67 Identities = 261/303 (86%), Gaps = 3/303 (0%) Strand = Plus / Plus Query: 237 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 296 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 297 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 356 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 357 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 416 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 417 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 476 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 477 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 536 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 537 act 539 ||| Sbjct: 599 act 601 Score = 230 bits (116), Expect = 4e-57 Identities = 191/216 (88%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| || || ||||||||||||| ||| ||| |||||| |||||| Sbjct: 70 gaaatgcttcggggagctgcgaacaagcatagatccgaagacccccgaatagggcaacct 129 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||| | |||||||||||| ||| | |||||| |||||||||||||||||||||| Sbjct: 130 cttgtactacttgctgaatccataggcaagaaagagataacctggcgaactgaaacatct 189 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 190 tagtagccagaggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacggga 249 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagc 220 |||||||||||| |||| ||||||||||||||||| Sbjct: 250 tcagcctaaaccgcgaaagcggggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 264 bits (133), Expect = 3e-67 Identities = 261/303 (86%), Gaps = 3/303 (0%) Strand = Plus / Minus Query: 237 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 296 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 297 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 356 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 357 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 416 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 417 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 476 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 477 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 536 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 537 act 539 ||| Sbjct: 124666 act 124664 Score = 264 bits (133), Expect = 3e-67 Identities = 261/303 (86%), Gaps = 3/303 (0%) Strand = Plus / Plus Query: 237 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 296 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 297 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 356 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 357 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 416 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 417 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 476 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 477 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 536 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 537 act 539 ||| Sbjct: 95200 act 95202 Score = 230 bits (116), Expect = 4e-57 Identities = 191/216 (88%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| || || ||||||||||||| ||| ||| |||||| |||||| Sbjct: 125195 gaaatgcttcggggagctgcgaacaagcatagatccgaagacccccgaatagggcaacct 125136 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||| | |||||||||||| ||| | |||||| |||||||||||||||||||||| Sbjct: 125135 cttgtactacttgctgaatccataggcaagaaagagataacctggcgaactgaaacatct 125076 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 125075 tagtagccagaggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacggga 125016 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagc 220 |||||||||||| |||| ||||||||||||||||| Sbjct: 125015 tcagcctaaaccgcgaaagcggggttgtgggagagc 124980 Score = 230 bits (116), Expect = 4e-57 Identities = 191/216 (88%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| || || ||||||||||||| ||| ||| |||||| |||||| Sbjct: 94671 gaaatgcttcggggagctgcgaacaagcatagatccgaagacccccgaatagggcaacct 94730 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||| | |||||||||||| ||| | |||||| |||||||||||||||||||||| Sbjct: 94731 cttgtactacttgctgaatccataggcaagaaagagataacctggcgaactgaaacatct 94790 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 94791 tagtagccagaggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacggga 94850 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggagagc 220 |||||||||||| |||| ||||||||||||||||| Sbjct: 94851 tcagcctaaaccgcgaaagcggggttgtgggagagc 94886
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 258 bits (130), Expect = 2e-65 Identities = 201/224 (89%), Gaps = 3/224 (1%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 495 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 496 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgact 598 Score = 151 bits (76), Expect = 3e-33 Identities = 145/168 (86%) Strand = Plus / Plus Query: 29 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 88 |||||| ||||||||||| ||| |||||| |||||| || |||| | ||||||| || Sbjct: 81 aagcattgatccggagatccccgaatagggcaacctcttgaactctccgctgaataaata 140 Query: 89 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 148 || | ||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 141 ggcggagcagagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagca 200 Query: 149 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 196 |||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 201 aaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 258 bits (130), Expect = 2e-65 Identities = 201/224 (89%), Gaps = 3/224 (1%) Strand = Plus / Minus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 495 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 496 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgact 115064 Score = 258 bits (130), Expect = 2e-65 Identities = 201/224 (89%), Gaps = 3/224 (1%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 495 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 496 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgact 86924 Score = 151 bits (76), Expect = 3e-33 Identities = 145/168 (86%) Strand = Plus / Minus Query: 29 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 88 |||||| ||||||||||| ||| |||||| |||||| || |||| | ||||||| || Sbjct: 115582 aagcattgatccggagatccccgaatagggcaacctcttgaactctccgctgaataaata 115523 Query: 89 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 148 || | ||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 115522 ggcggagcagagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagca 115463 Query: 149 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 196 |||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 115462 aaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 151 bits (76), Expect = 3e-33 Identities = 145/168 (86%) Strand = Plus / Plus Query: 29 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 88 |||||| ||||||||||| ||| |||||| |||||| || |||| | ||||||| || Sbjct: 86406 aagcattgatccggagatccccgaatagggcaacctcttgaactctccgctgaataaata 86465 Query: 89 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 148 || | ||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 86466 ggcggagcagagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagca 86525 Query: 149 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 196 |||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 86526 aaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 244 bits (123), Expect = 3e-61 Identities = 201/224 (89%), Gaps = 6/224 (2%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 495 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 496 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 | ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgact 627 Score = 95.6 bits (48), Expect = 1e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 96 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 155 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 156 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 195 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 244 bits (123), Expect = 3e-61 Identities = 201/224 (89%), Gaps = 6/224 (2%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 495 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 496 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgact 588 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 96 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 155 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 156 ttcccgtagtagcggcgagcgaa 178 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 244 bits (123), Expect = 3e-61 Identities = 129/131 (98%) Strand = Plus / Minus Query: 410 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 469 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 470 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 529 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 530 gccggcgactc 540 ||||||||||| Sbjct: 107930 gccggcgactc 107920
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 4e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 244 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 303 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 304 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 363 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 364 accttgcaaggctaaatactcctgggtgaccga 396 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 263 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 322 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 323 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 382 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 383 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 442 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 443 gtagtgaaatagaacgtgaaa 463 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 172 bits (87), Expect = 8e-40 Identities = 180/207 (86%), Gaps = 3/207 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||| Sbjct: 68 gaaatgcttcggggagttaaaaataaacatagatccggagattcccgaataggtaaacct 127 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||| | |||||| |||| ||| ||| ||||||| |||||||| ||||| Sbjct: 128 ttaaaactg-ctgcttattccatg-gcagacaaaaga-aacctggtgaactgaatcatct 184 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 |||||| |||||||||| |||||||||| ||| || |||||| |||||| |||| |||| Sbjct: 185 tagtagacagaggaaaataaagcaaaagttattaccatagtagtggcgagtgaaaaggga 244 Query: 185 gcagcctaaaccgtgaaaacggggttg 211 |||||||||||| |||| ||||||| Sbjct: 245 acagcctaaaccgctaaaatggggttg 271 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||| |||| |||||||||||||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactc 604
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 6/224 (2%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 495 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 496 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 | | | |||||||||||||||||||||||||||||||||||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgact 615 Score = 121 bits (61), Expect = 2e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 97 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 156 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 157 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 197 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 48.1 bits (24), Expect = 0.030 Identities = 51/60 (85%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||| ||||||||||| || ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 57 gaaacgcttcggggagctggaaacaagctttgatccgtagattcccgaatagggcaacct 116
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 6/224 (2%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 495 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 496 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 | | | |||||||||||||||||||||||||||||||||||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgact 2384 Score = 121 bits (61), Expect = 2e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 97 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 156 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 157 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 197 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 48.1 bits (24), Expect = 0.030 Identities = 51/60 (85%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||| ||||||||||| || ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 1823 gaaacgcttcggggagctggaaacaagctttgatccgtagattcccgaatagggcaacct 1882
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 230 bits (116), Expect = 4e-57 Identities = 202/230 (87%), Gaps = 3/230 (1%) Strand = Plus / Plus Query: 310 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 369 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 370 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 429 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 430 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 489 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 490 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 || || | || ||||||||||||||||||||||||||||||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgact 564 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 103 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 162 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 163 agtagcggcgagcgaaatgggagcagcctaaacc 196 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 228 bits (115), Expect = 1e-56 Identities = 198/224 (88%), Gaps = 5/224 (2%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 495 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 496 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgact 594 Score = 143 bits (72), Expect = 7e-31 Identities = 156/184 (84%) Strand = Plus / Plus Query: 14 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 73 ||||||| || || ||||| | ||||||||||||||| ||| || |||||| ||| Sbjct: 66 cggggagctggaagtaagcttcgatccggagattcccgaatggggcaacctcaaggactc 125 Query: 74 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 133 |||||||||| ||| ||||| |||| |||| || |||||||||||||||||||||| Sbjct: 126 cctgctgaattcataggcagggtagaggaaacccggtgaactgaaacatcttagtagccg 185 Query: 134 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 193 ||||||||||||||||| ||||||||| |||||||||||||||||| |||| |||||||| Sbjct: 186 gaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaacgggaccagcctaa 245 Query: 194 accg 197 |||| Sbjct: 246 accg 249
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 226 bits (114), Expect = 6e-56 Identities = 117/118 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434037 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 19433978 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 122 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19433977 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 19433920 Score = 83.8 bits (42), Expect = 5e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 490 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 531 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12182494 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 12182453 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 408 taccgtgagggaaaggtgaaaagaacc 434 |||||||||||||||||||||| |||| Sbjct: 14553517 taccgtgagggaaaggtgaaaataacc 14553543
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 226 bits (114), Expect = 6e-56 Identities = 203/232 (87%), Gaps = 3/232 (1%) Strand = Plus / Plus Query: 309 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 368 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 369 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 428 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 429 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 488 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 489 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 || ||| | |||| |||||||||||||||||||||||||||||||||||| Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactc 608 Score = 157 bits (79), Expect = 5e-35 Identities = 165/191 (86%), Gaps = 2/191 (1%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||| |||||||||||| ||||| | | ||||||||||||||||| ||| || |||| Sbjct: 70 gaaacgcttcggggagtcgaaaacagacgtagatccggagattcccgaatggggtaaccc 129 Query: 65 -tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 123 ||| |||||| ||||||| ||| ||| | |||||||||||||| ||||||||||||| Sbjct: 130 ctttgtactgcc-gctgaattcataagcggataagagacaacctggtgaactgaaacatc 188 Query: 124 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 |||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 189 ttagtaaccagaggaaaagaaagcaaaagcgatttcctgagtagcggcgagcgaaatggg 248 Query: 184 agcagcctaaa 194 || |||||||| Sbjct: 249 agaagcctaaa 259
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 226 bits (114), Expect = 6e-56 Identities = 239/280 (85%), Gaps = 3/280 (1%) Strand = Plus / Plus Query: 261 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 320 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 321 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 380 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 381 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 440 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 441 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 500 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606 Query: 501 tctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||| |||||||||||||||||||||||||||||||||||| Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactc 4646 Score = 186 bits (94), Expect = 5e-44 Identities = 167/190 (87%), Gaps = 1/190 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 ||||||||||||||||| ||||| | |||||||||||||||||||| ||| || |||| Sbjct: 4103 gaaatgcttcggggagtcgaaaacaggcatagatccggagattcccgaatggggtaaccc 4162 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||| || | |||||| ||||||| |||||||||||||| Sbjct: 4163 cttgtactgcc-gctgaatccataggcggataagagagaacctggtgaactgaaacatct 4221 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 4222 tagtagccagaggaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatggga 4281 Query: 185 gcagcctaaa 194 | |||||||| Sbjct: 4282 gaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 226 bits (114), Expect = 6e-56 Identities = 239/280 (85%), Gaps = 3/280 (1%) Strand = Plus / Plus Query: 261 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 320 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 321 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 380 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 381 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 440 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 441 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 500 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 501 tctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||| |||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactc 613 Score = 178 bits (90), Expect = 1e-41 Identities = 166/190 (87%), Gaps = 1/190 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 ||||||||||||||||| ||||| | |||||||||||||||||||| ||| || |||| Sbjct: 70 gaaatgcttcggggagtcgaaaacaggcatagatccggagattcccgaatggggtaaccc 129 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||| ||| || | |||||| ||||||| |||||||||||||| Sbjct: 130 cttgtactgcc-gctgaatacataggcggataagagagaacctggtgaactgaaacatct 188 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 189 tagtagccagaggaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatggga 248 Query: 185 gcagcctaaa 194 | |||||||| Sbjct: 249 gaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 226 bits (114), Expect = 6e-56 Identities = 239/280 (85%), Gaps = 3/280 (1%) Strand = Plus / Plus Query: 261 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 320 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 321 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 380 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 381 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 440 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 441 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 500 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 501 tctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||| |||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactc 613 Score = 186 bits (94), Expect = 5e-44 Identities = 167/190 (87%), Gaps = 1/190 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 ||||||||||||||||| ||||| | |||||||||||||||||||| ||| || |||| Sbjct: 70 gaaatgcttcggggagtcgaaaacaggcatagatccggagattcccgaatggggtaaccc 129 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || |||||| ||||||||||| || | |||||| ||||||| |||||||||||||| Sbjct: 130 cttgtactgcc-gctgaatccataggcggataagagagaacctggtgaactgaaacatct 188 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 189 tagtagccagaggaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatggga 248 Query: 185 gcagcctaaa 194 | |||||||| Sbjct: 249 gaagcctaaa 258
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 226 bits (114), Expect = 6e-56 Identities = 117/118 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51564 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 51505 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 122 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51504 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 226 bits (114), Expect = 6e-56 Identities = 117/118 (99%) Strand = Plus / Minus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119528 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119469 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 122 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119468 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 226 bits (114), Expect = 6e-56 Identities = 117/118 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6094 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 6153 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 122 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6154 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 6211
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 222 bits (112), Expect = 9e-55 Identities = 115/116 (99%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1614 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 1673 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 120 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1674 tttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 1729
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 278 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 337 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 338 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 397 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 398 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 457 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 458 gtgaaa 463 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 63 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 64 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 123 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 124 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 184 agcagcctaa 193 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||| || |||||||||||||||| |||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactc 580
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 278 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 337 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 338 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 397 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 398 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 457 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 458 gtgaaa 463 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 63 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 64 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 123 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 124 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 184 agcagcctaa 193 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||| || |||||||||||||||| |||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactc 579
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 278 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 337 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 338 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 397 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 398 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 457 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 458 gtgaaa 463 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 63 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 64 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 123 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 124 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 184 agcagcctaa 193 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||| || |||||||||||||||| |||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactc 580
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 278 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 337 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 338 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 397 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 398 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 457 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 458 gtgaaa 463 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 63 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 64 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 123 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 124 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 184 agcagcctaa 193 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||| ||||| || |||||||||||||||| |||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactc 580
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 278 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 337 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 338 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 397 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 398 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 457 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 458 gtgaaa 463 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 63 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 64 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 123 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 124 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 184 agcagcctaa 193 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||| || |||||||||||||||| |||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactc 580
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 278 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 337 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 338 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 397 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 398 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 457 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 458 gtgaaa 463 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 4e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 63 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 64 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 123 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 124 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 184 ag 185 || Sbjct: 245 ag 246 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||| || |||||||||||||||| |||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactc 580
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 278 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 337 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 338 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 397 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 398 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 457 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 458 gtgaaa 463 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 63 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 64 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 123 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 124 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 184 agcagcctaa 193 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||| || |||||||||||||||| |||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactc 579
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 278 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 337 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 338 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 397 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 398 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 457 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 458 gtgaaa 463 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 63 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 64 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 123 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 124 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 184 agcagcctaa 193 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||| || |||||||||||||||| |||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactc 580
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 278 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 337 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 338 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 397 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 398 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 457 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 458 gtgaaa 463 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 63 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 64 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 123 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 124 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 184 agcagcctaa 193 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||| || |||||||||||||||| |||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactc 580
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 278 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 337 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 338 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 397 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 398 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 457 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 458 gtgaaa 463 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 63 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 64 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 123 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 124 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 184 agcagcctaa 193 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||| || |||||||||||||||| |||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactc 580
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 278 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 337 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 338 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 397 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 398 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 457 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 458 gtgaaa 463 ||||| Sbjct: 504 atgaaa 509 Score = 155 bits (78), Expect = 2e-34 Identities = 166/190 (87%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 63 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 64 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 123 ||| ||||||| |||| | |||||| | || ||||||| |||| |||||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggcgaactgaaacatc 184 Query: 124 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 184 agcagcctaa 193 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||| || |||||||||||||||| |||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactc 580
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 278 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 337 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 338 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 397 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 398 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 457 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 458 gtgaaa 463 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 63 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 64 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 123 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 124 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 184 agcagcctaa 193 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||| || |||||||||||||||| |||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactc 580
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 278 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 337 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 338 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 397 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 398 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 457 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 458 gtgaaa 463 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 63 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 64 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 123 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 124 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 184 agcagcctaa 193 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||| || |||||||||||||||| |||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactc 580
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 278 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 337 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 338 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 397 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 398 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 457 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 458 gtgaaa 463 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 63 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 64 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 123 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 124 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 184 agcagcctaa 193 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||| || |||||||||||||||| |||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactc 580
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 278 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 337 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 338 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 397 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 398 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 457 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 458 gtgaaa 463 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 63 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 64 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 123 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 124 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 184 agcagcctaa 193 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||| || |||||||||||||||| |||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactc 580
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 216 bits (109), Expect = 6e-53 Identities = 199/226 (88%), Gaps = 6/226 (2%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 434 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 435 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 494 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 495 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 | | |||||||||||||||||||||||||||||||||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactc 575 Score = 123 bits (62), Expect = 6e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 102 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 161 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 162 tagtagcggcgagcgaaatgggagcagcctaaac 195 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 216 bits (109), Expect = 6e-53 Identities = 137/145 (94%), Gaps = 1/145 (0%) Strand = Plus / Minus Query: 6 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 65 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||| Sbjct: 89811 aaatgcttcggggagttgaaaataagcgtagatccggagattccggaataggttaacctt 89752 Query: 66 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 125 || |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 89751 ttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 89693 Query: 126 agtagccagaggaaaagaaagcaaa 150 | ||||||||||||||||||||||| Sbjct: 89692 actagccagaggaaaagaaagcaaa 89668 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 390 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 120438 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 120483
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 216 bits (109), Expect = 6e-53 Identities = 137/145 (94%), Gaps = 1/145 (0%) Strand = Plus / Plus Query: 6 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 65 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||| Sbjct: 459 aaatgcttcggggagttgaaaataagcgtagatccggagattccggaataggttaacctt 518 Query: 66 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 125 || |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 519 ttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 577 Query: 126 agtagccagaggaaaagaaagcaaa 150 | ||||||||||||||||||||||| Sbjct: 578 actagccagaggaaaagaaagcaaa 602 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 390 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 42056 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 42101
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 212 bits (107), Expect = 9e-52 Identities = 196/225 (87%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 315 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 374 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 375 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 434 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 435 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 494 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 495 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 | | |||| ||||||||||||||||||||||||||||||||||| Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgact 1005 Score = 167 bits (84), Expect = 5e-38 Identities = 142/160 (88%), Gaps = 1/160 (0%) Strand = Plus / Plus Query: 39 ccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaag 98 |||||||||||| |||||| |||||| | ||||||| |||||||| ||| || | ||| Sbjct: 505 ccggagattcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaag 563 Query: 99 agacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattc 158 ||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 564 agacaacctggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattc 623 Query: 159 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 198 || |||||| ||||||||||| |||| ||||||||||||| Sbjct: 624 ccttagtagtggcgagcgaaacgggaacagcctaaaccgt 663
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 212 bits (107), Expect = 9e-52 Identities = 196/224 (87%), Gaps = 5/224 (2%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 495 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 496 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgact 735 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 96 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 155 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 156 ttcccgtagtagcggcgagcgaaatggga 184 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 9e-52 Identities = 140/151 (92%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccg 466 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 143 bits (72), Expect = 7e-31 Identities = 162/192 (84%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| |||||| Sbjct: 49 gaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggcaacct 108 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 |||| ||| | ||| ||| || |||||||||| |||| || |||||||||||||| Sbjct: 109 caagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaacatct 168 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 169 aagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaaggga 228 Query: 185 gcagcctaaacc 196 ||||||||||| Sbjct: 229 acagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 504 ctgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 3e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 278 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 337 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 338 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 397 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 398 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 457 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 458 gtgaaa 463 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 4e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 63 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 64 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 123 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 124 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 184 ag 185 || Sbjct: 245 ag 246 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 502 ctctgaccgcgtgcctgttgaagaatgagccggcgactc 540 |||||||||||||| || |||||||||||||||| |||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactc 580
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 5e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgt 467 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 92 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 151 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 152 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 196 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 504 ctgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 5e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgt 467 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 6e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 115 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 174 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 175 cgaaatgggagcagcctaaacc 196 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 503 tctgaccgcgtgcctgttgaagaatgagccggcgact 539 ||||||||||||||||||||||||||||||||||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgact 621
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 9e-49 Identities = 117/122 (95%) Strand = Plus / Plus Query: 315 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 374 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 375 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 434 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 435 cc 436 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 94 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 153 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 154 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 197 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 506 gaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||||||||||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgact 595 Score = 44.1 bits (22), Expect = 0.47 Identities = 37/42 (88%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagat 46 ||||||||||||||||||| ||| | || |||||||||||| Sbjct: 70 gaaatgcttcggggagttggaaagaggctgagatccggagat 111
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 9e-49 Identities = 135/146 (92%) Strand = Plus / Plus Query: 320 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 379 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 380 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 439 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 440 tgggtagtgaaatagaacgtgaaacc 465 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 143 bits (72), Expect = 7e-31 Identities = 177/212 (83%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| || || ||| ||| ||||| |||||||| |||||| ||||| Sbjct: 1837 gaaatgcttcggggagctgcgaacaagtataaatccgaagattcccgaatagggtaacct 1896 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||| |||| |||| || | |||| ||||| ||||| | |||||||||||||| Sbjct: 1897 cttgtactacctgtataatcaataatcaggttagagaaaacctagtgaactgaaacatct 1956 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||||| ||||||| | |||||||||||||||||| |||||| ||||||||||| |||| Sbjct: 1957 tagtagctagaggaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacggga 2016 Query: 185 gcagcctaaaccgtgaaaacggggttgtggga 216 | ||||||||||| ||| ||||||||||||| Sbjct: 2017 accgcctaaaccgttaaagcggggttgtggga 2048
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgt 467 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 115 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 174 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 175 cgaaatgggagcagcctaaacc 196 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 504 ctgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||||||||||||||||||||||||||||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgact 780
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgt 467 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 6e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 111 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 170 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 171 cgagcgaaatgggagcagcctaaac 195 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 505 tgaccgcgtgcctgttgaagaatgagccggcgact 539 ||||||||||||||||||||||||||||||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgact 615 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 10 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgt 467 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 111 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 170 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 171 cgagcgaaatgggagcagcctaaacc 196 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 505 tgaccgcgtgcctgttgaagaatgagccggcgact 539 ||||||||||||||||||||||||||||||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgact 669 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 10 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 1e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgt 467 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 6e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 115 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 174 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 175 cgaaatgggagcagcctaaacc 196 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 504 ctgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||||||||||||||||||||||||||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgact 628
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 198 bits (100), Expect = 1e-47 Identities = 197/226 (87%), Gaps = 10/226 (4%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 493 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 494 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 | | || | |||||||||||||||||||||||||||||||||||| Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgact 653 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 111 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 170 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 171 cgagcgaaatgggagcagcctaaacc 196 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgt 467 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgt 467 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 111 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 170 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 171 cgagcgaaatgggagcagcctaaacc 196 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 111 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 170 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 171 cgagcgaaatgggagcagcctaaacc 196 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 505 tgaccgcgtgcctgttgaagaatgagccggcgact 539 ||||||||||||||||||||||||||||||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgact 151772 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 505 tgaccgcgtgcctgttgaagaatgagccggcgact 539 ||||||||||||||||||||||||||||||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgact 42431
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgt 467 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 111 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 170 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 171 cgagcgaaatgggagcagcctaaacc 196 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 505 tgaccgcgtgcctgttgaagaatgagccggcgact 539 ||||||||||||||||||||||||||||||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgact 669 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 10 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgt 467 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 6e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 111 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 170 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 171 cgagcgaaatgggagcagcctaaac 195 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 505 tgaccgcgtgcctgttgaagaatgagccggcgact 539 ||||||||||||||||||||||||||||||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgact 615 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 10 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgt 467 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 111 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 170 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 171 cgagcgaaatgggagcagcctaaacc 196 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 505 tgaccgcgtgcctgttgaagaatgagccggcgact 539 ||||||||||||||||||||||||||||||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgact 603
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgt 467 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 111 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 170 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 171 cgagcgaaatgggagcagcctaaacc 196 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 505 tgaccgcgtgcctgttgaagaatgagccggcgact 539 ||||||||||||||||||||||||||||||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgact 688
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 196 bits (99), Expect = 5e-47 Identities = 199/225 (88%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 434 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 435 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 494 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 495 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgact 659 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 96 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 155 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 156 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 197 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 436 ccagtgggtagtgaaatagaacgtgaaacc 465 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 9e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 111 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 170 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 171 cgagcgaaatgggagcagcctaaacc 196 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 504 ctgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||| ||||||||||| || ||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 49 gaaacgcttcggggagctggaaacaagcaatgatccggagattcccgaatagggcaacct 108
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 424 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 483 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 484 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 533 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 320 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 379 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 380 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 439 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 440 tgggtagtgaaatagaacgtgaaacc 465 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 178 bits (90), Expect = 1e-41 Identities = 183/214 (85%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| || || ||| ||||||||| |||||||| |||||| |||||| Sbjct: 70 gaaatgcttcggggagctgcgaacaagtatagatccgaagattcccgaatagggcaacct 129 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||| |||| ||| ||| | |||| ||||| ||||| | |||||||||||||| Sbjct: 130 cttgtactacctgtaaaatacataatcaggttagagaaaacctagtgaactgaaacatct 189 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||||| ||||||| | |||||||||||||||||| |||||| ||||||||||| |||| Sbjct: 190 tagtagctagaggaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacggga 249 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggaga 218 ||||||||||||||||| ||||||||||||||| Sbjct: 250 acagcctaaaccgtgaaagcggggttgtgggaga 283 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 505 tgaccgcgtgcctgttgaagaatgagccggcgact 539 ||||||||||||||||||||||||||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 320 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 379 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 380 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 439 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 440 tgggtagtgaaatagaacgtgaaacc 465 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 163 bits (82), Expect = 7e-37 Identities = 181/214 (84%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 ||||||||| |||||| || || ||| ||||||||| |||||||| |||||| |||||| Sbjct: 3104 gaaatgctttggggagctgcgaacaagtatagatccgaagattcccgaatagggcaacct 3163 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||| |||| ||| ||| |||| ||||| ||||| | |||||||||||||| Sbjct: 3164 cttgtactacctgtaaaatacatagtcaggttagagaaaacctagtgaactgaaacatct 3223 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||||| ||||||| | |||||||||||||||||| |||||| ||||||||||| |||| Sbjct: 3224 tagtagctagaggaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacggga 3283 Query: 185 gcagcctaaaccgtgaaaacggggttgtgggaga 218 ||||||||||||||||| ||||||||||||||| Sbjct: 3284 acagcctaaaccgtgaaagcggggttgtgggaga 3317 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 505 tgaccgcgtgcctgttgaagaatgagccggcgact 539 ||||||||||||||||||||||||||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgact 3635
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 194 bits (98), Expect = 2e-46 Identities = 190/220 (86%), Gaps = 3/220 (1%) Strand = Plus / Plus Query: 320 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 379 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 380 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 439 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 440 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 499 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattga 561 Query: 500 atctctgaccgcgtgcctgttgaagaatgagccggcgact 539 | || ||||||||||||||||||||||||||||||||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgact 601 Score = 167 bits (84), Expect = 5e-38 Identities = 180/212 (84%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||||||||||||||| || || ||||||| ||||| |||||||| |||||| ||||| Sbjct: 70 gaaatgcttcggggagctgcgaacaagcataaatccgaagattcccgaatagggtaacct 129 Query: 65 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 124 || ||| |||| |||| || | |||| ||||| ||||| | |||||||||||||| Sbjct: 130 cttgtactacctgtagaattaataatcaggttagagaaaacctagtgaactgaaacatct 189 Query: 125 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 184 ||||||| |||||||||||||||||||||||||||| ||||| ||||||||||| |||| Sbjct: 190 tagtagctagaggaaaagaaagcaaaagcgattccctcagtagtggcgagcgaaacggga 249 Query: 185 gcagcctaaaccgtgaaaacggggttgtggga 216 |||||||||||| |||| ||||||||||||| Sbjct: 250 acagcctaaaccgcgaaagcggggttgtggga 281
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 436 ccagtgggtagtgaaatagaacgtgaaacc 465 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 111 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 170 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 171 cgagcgaaatgggagcagcctaaacc 196 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 504 ctgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||| ||||||||||| || ||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 24858 gaaacgcttcggggagctggaaacaagcaatgatccggagattcccgaatagggcaacct 24917
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 8e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 319 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 378 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 379 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 438 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 439 gtgggtagtgaaatagaacgtgaaaccgt 467 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 512 gtgcctgttgaagaatgagccggcgact 539 |||||||||||||||||||||||||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgact 218
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 192 bits (97), Expect = 8e-46 Identities = 197/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 376 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 434 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 435 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 492 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 493 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgact 622 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 115 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 174 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 175 cgaa 178 |||| Sbjct: 238 cgaa 241
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 192 bits (97), Expect = 8e-46 Identities = 197/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 376 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 434 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 435 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 492 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 493 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgact 603 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 115 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 174 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 175 cgaa 178 |||| Sbjct: 219 cgaa 222
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 8e-46 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 434 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 435 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 494 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 495 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 96 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 155 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 156 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 197 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 192 bits (97), Expect = 8e-46 Identities = 197/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 376 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 434 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 435 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 492 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 493 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgact 622 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 115 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 174 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 175 cgaa 178 |||| Sbjct: 238 cgaa 241
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 3e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgt 467 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 111 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 170 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 171 cgagcgaaatgggagcagcctaaacc 196 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 505 tgaccgcgtgcctgttgaagaatgagccggcgact 539 ||||||||||||||||||||||||||||||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgact 612 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 10 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 55 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 109
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 3e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgt 467 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 111 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 170 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 171 cgagcgaaatgggagcagcctaaacc 196 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 505 tgaccgcgtgcctgttgaagaatgagccggcgact 539 |||| |||||||||||||||||||||||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgact 620
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 188 bits (95), Expect = 1e-44 Identities = 190/221 (85%), Gaps = 3/221 (1%) Strand = Plus / Plus Query: 319 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 378 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 379 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 438 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 439 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 498 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 499 gatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 | ||||||||||||||||||||||||||||||||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgact 218
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 188 bits (95), Expect = 1e-44 Identities = 195/226 (86%), Gaps = 8/226 (3%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 493 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 494 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 ||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgact 606 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 111 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 170 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 171 cgagcgaaatgggagcagcctaaacc 196 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 188 bits (95), Expect = 1e-44 Identities = 195/226 (86%), Gaps = 8/226 (3%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 493 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 494 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 ||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgact 606 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 111 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 170 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 171 cgagcgaaatgggagcagcctaaacc 196 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 491 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 491 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 2e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 97 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 156 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 157 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 197 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 2e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 97 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 156 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 157 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 197 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Minus Query: 504 ctgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||||||||||||||||||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgact 170906 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 504 ctgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||||||||||||||||||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgact 122020 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 36 gatccggagattcccaaataggtcaacct 64 ||||||||||||||| |||||| |||||| Sbjct: 171418 gatccggagattcccgaatagggcaacct 171390 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 36 gatccggagattcccaaataggtcaacct 64 ||||||||||||||| |||||| |||||| Sbjct: 121508 gatccggagattcccgaatagggcaacct 121536
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 186 bits (94), Expect = 5e-44 Identities = 195/226 (86%), Gaps = 12/226 (5%) Strand = Plus / Minus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 434 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 435 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 493 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 494 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 || ||||||||||||||||||||||||||||||||||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgact 155618 Score = 186 bits (94), Expect = 5e-44 Identities = 195/226 (86%), Gaps = 12/226 (5%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 434 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 435 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 493 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 494 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 || ||||||||||||||||||||||||||||||||||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgact 78274 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 96 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 155 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 156 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 196 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 96 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 155 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 156 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 196 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 42.1 bits (21), Expect = 1.9 Identities = 51/61 (83%) Strand = Plus / Minus Query: 10 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 69 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| |||| Sbjct: 156227 gcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaa 156168 Query: 70 a 70 | Sbjct: 156167 a 156167 Score = 42.1 bits (21), Expect = 1.9 Identities = 51/61 (83%) Strand = Plus / Plus Query: 10 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 69 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| |||| Sbjct: 77665 gcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaa 77724 Query: 70 a 70 | Sbjct: 77725 a 77725
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 491 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 2e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 97 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 156 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 157 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 197 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 504 ctgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||||||||||||||||||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgact 611 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 36 gatccggagattcccaaataggtcaacct 64 ||||||||||||||| |||||| |||||| Sbjct: 99 gatccggagattcccgaatagggcaacct 127
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 434 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 435 cccagtgggtagtgaaatagaacgtgaaaccgt 467 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 131 bits (66), Expect = 3e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 96 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 155 |||||| |||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagagataacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 156 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 197 ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatgggaacagcctaaaccg 249 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 504 ctgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||||||||||||||||||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgact 664
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 8e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgt 467 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 151 bits (76), Expect = 3e-33 Identities = 160/188 (85%) Strand = Plus / Plus Query: 10 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 69 ||||||||||| || || |||| | |||||| |||||||| |||||| ||||||| || Sbjct: 62 gcttcggggagctggaatcaagctttgatccgaagattcccgaatagggcaaccttatat 121 Query: 70 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 129 ||| |||| ||||| ||| |||| ||||||||||| |||||| ||||||||||||||| Sbjct: 122 acttcctgttgaattcatagacaggtaagagacaacccggcgaattgaaacatcttagta 181 Query: 130 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 189 ||| | ||||||||||||||| ||||||||| |||||| ||||||||||| |||| ||| Sbjct: 182 gccggtggaaaagaaagcaaacgcgattcccttagtagtggcgagcgaaaagggatcagt 241 Query: 190 ctaaaccg 197 |||||||| Sbjct: 242 ctaaaccg 249 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 503 tctgaccgcgtgcctgttgaagaatgagccggcgact 539 ||||||||||||||||||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgact 592
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 178 bits (90), Expect = 1e-41 Identities = 198/228 (86%), Gaps = 12/228 (5%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 434 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 435 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 491 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 492 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 539 | ||| || |||||||||||||||||||||||||||||||||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgact 602 Score = 111 bits (56), Expect = 2e-21 Identities = 159/192 (82%), Gaps = 1/192 (0%) Strand = Plus / Plus Query: 5 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 64 |||| ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| Sbjct: 50 gaaacgcttcggggagctggcaacaagcatcgatccgaagatccccgaatagggcaacct 109 Query: 65 ttta-aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 123 ||| ||||||| |||||| ||| | || |||| |||| ||||| ||||||||| Sbjct: 110 cttagaactgcccactgaattcataggtgggtcagaggcaactcagcgaattgaaacatc 169 Query: 124 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 183 |||||||| |||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 170 ttagtagctgaaggaaaagaaagcaaaagcgattcccaaagtagcggcgagcggaatggg 229 Query: 184 agcagcctaaac 195 | |||||||||| Sbjct: 230 aacagcctaaac 241
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 436 ccagtgggtagtgaaatagaacgtgaaacc 465 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 10 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 69 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 70 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 129 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 130 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 189 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 190 ctaaacc 196 ||||||| Sbjct: 253 ctaaacc 259 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 504 ctgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||||||||||||||||||||||||||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgact 617
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 436 ccagtgggtagtgaaatagaacgtgaaacc 465 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 111 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 170 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 171 cgagcgaaatgggagcagcctaaacc 196 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 504 ctgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 436 ccagtgggtagtgaaatagaacgtgaaacc 465 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 10 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 69 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 70 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 129 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 130 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 189 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 190 ctaaacc 196 ||||||| Sbjct: 253 ctaaacc 259 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 504 ctgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||||||||||||||||||||||||||||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgact 617
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 319 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 378 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 379 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 438 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 439 gtgggtagtgaaatagaacgtgaaaccgt 467 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 503 tctgaccgcgtgcctgttgaagaatgagccggcga 537 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 5e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 436 ccagt-gggtagtgaaatagaacgtgaaaccgt 467 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 4e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 96 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 155 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 156 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 197 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 505 tgaccgcgtgcctgttgaagaatgagccggcgact 539 ||||||| ||||||||||||||||||||||||||| Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgact 748
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgtg 468 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 8e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 109 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 168 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 169 ggcgagcgaaatgggagcagcctaaacc 196 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 505 tgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||| |||||||||||||||||||||||||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgact 439
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgtg 468 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 8e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 109 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 168 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 169 ggcgagcgaaatgggagcagcctaaacc 196 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 505 tgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||| |||||||||||||||||||||||||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgact 439
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgtg 468 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 73.8 bits (37), Expect = 5e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 112 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 171 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 172 gagcgaaatgggagcagcctaaacc 196 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 505 tgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgtg 468 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 8e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 109 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 168 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 169 ggcgagcgaaatgggagcagcctaaacc 196 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 505 tgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgtg 468 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 8e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 109 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 168 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 169 ggcgagcgaaatgggagcagcctaaacc 196 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 505 tgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||| |||||||||||||||||||||||||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgact 439
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgtg 468 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 8e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 109 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 168 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 169 ggcgagcgaaatgggagcagcctaaacc 196 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 505 tgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgtg 468 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 8e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 109 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 168 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 169 ggcgagcgaaatgggagcagcctaaacc 196 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 505 tgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgtg 468 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 8e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 109 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 168 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 169 ggcgagcgaaatgggagcagcctaaacc 196 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 505 tgaccgcgtgcctgttgaagaatgagccggcgact 539 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 176 bits (89), Expect = 5e-41 Identities = 194/225 (86%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 316 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 375 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 376 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 435 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 436 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 495 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 496 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgact 539 ||| | || ||||||||||||||||||||||||||||||||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgact 784 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 97 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 156 |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 199 Query: 157 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 196 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 200 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 315 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 374 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 365 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 424 Query: 375 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 434 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 425 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 484 Query: 435 c 435 | Sbjct: 485 c 485 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 102 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 161 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 162 tagtagcggcgagcgaaatgggagcagcctaaaccg 197 |||||||||||||||| |||| |||||||||||| Sbjct: 210 cagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 504 ctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||||||||||||||||||||||||||||||||| Sbjct: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactc 587 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Plus Query: 238 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 287 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 287 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 336
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 315 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 374 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 437 Query: 375 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 434 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 438 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 497 Query: 435 c 435 | Sbjct: 498 c 498 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 102 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 161 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 163 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 222 Query: 162 tagtagcggcgagcgaaatgggagcagcctaaaccg 197 |||||||||||||||| |||| |||||||||||| Sbjct: 223 cagtagcggcgagcgaagagggaacagcctaaaccg 258 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 504 ctgaccgcgtgcctgttgaagaatgagccggcgactc 540 ||||||||||||||||||||||||||||||||||||| Sbjct: 564 ctgaccgcgtgcctgttgaagaatgagccggcgactc 600 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Plus Query: 238 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 287 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 300 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 349 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,952,392 Number of Sequences: 3902068 Number of extensions: 3952392 Number of successful extensions: 118505 Number of sequences better than 10.0: 26604 Number of HSP's better than 10.0 without gapping: 26432 Number of HSP's successfully gapped in prelim test: 207 Number of HSP's that attempted gapping in prelim test: 74723 Number of HSP's gapped (non-prelim): 41836 length of query: 540 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 517 effective length of database: 17,143,297,704 effective search space: 8863084912968 effective search space used: 8863084912968 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
