ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd26p18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464755.1| Oryza sativa (japonica cultivar-group), mRNA 226 7e-56
2dbj|AK066722.1| Oryza sativa (japonica cultivar-group) cDNA clon... 226 7e-56
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 210 4e-51
4dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic D... 210 4e-51
5dbj|AP005394.3| Oryza sativa (japonica cultivar-group) genomic D... 210 4e-51
6dbj|AK068719.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 1e-17
7dbj|AK068350.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 1e-17
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
9dbj|AP004739.3| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
10dbj|AP003713.3| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
11gb|AY078275.1| Uncultured bacterium clone nirSAK2 putative dissi... 42 2.1
12gb|DQ232371.1| Bacterium CYCU-0207 NirS (nirS) gene, partial cds 42 2.1
13gb|AY752342.1| Nesocichla eremita NADH dehydrogenase subunit 2 (... 42 2.1
14gb|AY739093.1| Takifugu rubripes frMUT, frGPR136L1, and frGPR136... 40 8.1
15ref|XM_478829.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
16gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 8.1
17ref|XM_382320.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 8.1
18ref|XM_447173.1| Candida glabrata CBS138, CAGL0H08580g partial mRNA 40 8.1
19gb|AC124259.6| Homo sapiens chromosome 11, clone RP11-21N2, comp... 40 8.1
20ref|XM_662608.1| Cryptosporidium hominis TU502 protease (Chro.60... 40 8.1
21gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 8.1
22emb|CR380954.1| Candida glabrata strain CBS138 chromosome H comp... 40 8.1
23emb|BX538350.1| Cryptosporidium parvum chromosome 6, complete se... 40 8.1
24emb|AL031745.8|PFMAL1P2 Plasmodium falciparum DNA from MAL1P2 40 8.1
25gb|AY821914.1| Didelphis virginiana blcap (Blcap) gene, complete... 40 8.1
26gb|AC152833.3| Ornithorhynchus anatinus BAC clone OABb-6A1 from ... 40 8.1
27gb|AC099329.2| Homo sapiens chromosome 3 clone RP11-70C1, comple... 40 8.1
28gb|AC044810.7| Homo sapiens chromosome 11, clone RP11-494M8, com... 40 8.1
29ref|XM_625346.1| Cryptosporidium parvum Iowa II hypothetical pro... 40 8.1
30gb|AC092043.3| Homo sapiens chromosome 3 clone RP11-141M3, compl... 40 8.1
31ref|XM_395197.2| PREDICTED: Apis mellifera similar to ENSANGP000... 40 8.1
32dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
33dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
34gb|AC007012.1|AC007012 Homo sapiens chromosome 16, clone 185J20,... 40 8.1
35dbj|AP000926.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.1
36emb|AL731554.13| Mouse DNA sequence from clone RP23-337H1 on chr... 40 8.1 
>ref|XM_464755.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 808

 Score =  226 bits (114), Expect = 7e-56
 Identities = 243/286 (84%)
 Strand = Plus / Plus

                                                                       
Query: 292 tagcccagcttcctgccaggacagggctgtccaagtactaccaagggaagtcccaatcat 351
           ||||||||||||||  ||||| |||||||||||| || |||||||| || ||||||||||
Sbjct: 342 tagcccagcttcctatcaggagagggctgtccaactattaccaaggaaaatcccaatcat 401

                                                                       
Query: 352 tcacatcgatatcttatgctacatgtcttcaagaccttggaaaggaagttacctacagca 411
           |||||||||||||| ||||||||||| |||| ||||||| |||| || |||||||||  |
Sbjct: 402 tcacatcgatatctgatgctacatgtgttcaggaccttgcaaagaaaattacctacaata 461

                                                                       
Query: 412 agaggatgaagacatgcaagagctatacatcaggattaggcatgaagcagcggtcaaatc 471
           ||||||||||| | ||||| |||||| || ||||| ||| |||||| || || |||||||
Sbjct: 462 agaggatgaaggcgtgcaaaagctatgcagcaggactagacatgaatcaacgatcaaatc 521

                                                                       
Query: 472 acttaccaaggacatgcaacaagatgataacaaagaggtcctcaaaaggttcatttgctt 531
           |||| |||| | ||||||||||||||||| | |||||| |||| ||||| |||||| | |
Sbjct: 522 acttgccaaagccatgcaacaagatgatagcgaagaggccctcgaaaggatcatttacct 581

                                                         
Query: 532 gtcaaatgtccagagcaagcagcaccaacctcttgtacagcagtgc 577
           |||   |||| ||| |||||||||||| |||| ||| |||||||||
Sbjct: 582 gtctgctgtcaagaccaagcagcaccagcctcctgtgcagcagtgc 627



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 222 tcagcatcgtcgagcaccttgcagctgga 250
           |||||||| |||||||| |||||||||||
Sbjct: 278 tcagcatcttcgagcacattgcagctgga 306
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>dbj|AK066722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087K21, full
           insert sequence
          Length = 808

 Score =  226 bits (114), Expect = 7e-56
 Identities = 243/286 (84%)
 Strand = Plus / Plus

                                                                       
Query: 292 tagcccagcttcctgccaggacagggctgtccaagtactaccaagggaagtcccaatcat 351
           ||||||||||||||  ||||| |||||||||||| || |||||||| || ||||||||||
Sbjct: 342 tagcccagcttcctatcaggagagggctgtccaactattaccaaggaaaatcccaatcat 401

                                                                       
Query: 352 tcacatcgatatcttatgctacatgtcttcaagaccttggaaaggaagttacctacagca 411
           |||||||||||||| ||||||||||| |||| ||||||| |||| || |||||||||  |
Sbjct: 402 tcacatcgatatctgatgctacatgtgttcaggaccttgcaaagaaaattacctacaata 461

                                                                       
Query: 412 agaggatgaagacatgcaagagctatacatcaggattaggcatgaagcagcggtcaaatc 471
           ||||||||||| | ||||| |||||| || ||||| ||| |||||| || || |||||||
Sbjct: 462 agaggatgaaggcgtgcaaaagctatgcagcaggactagacatgaatcaacgatcaaatc 521

                                                                       
Query: 472 acttaccaaggacatgcaacaagatgataacaaagaggtcctcaaaaggttcatttgctt 531
           |||| |||| | ||||||||||||||||| | |||||| |||| ||||| |||||| | |
Sbjct: 522 acttgccaaagccatgcaacaagatgatagcgaagaggccctcgaaaggatcatttacct 581

                                                         
Query: 532 gtcaaatgtccagagcaagcagcaccaacctcttgtacagcagtgc 577
           |||   |||| ||| |||||||||||| |||| ||| |||||||||
Sbjct: 582 gtctgctgtcaagaccaagcagcaccagcctcctgtgcagcagtgc 627



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 222 tcagcatcgtcgagcaccttgcagctgga 250
           |||||||| |||||||| |||||||||||
Sbjct: 278 tcagcatcttcgagcacattgcagctgga 306
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  210 bits (106), Expect = 4e-51
 Identities = 229/270 (84%)
 Strand = Plus / Minus

                                                                           
Query: 308     caggacagggctgtccaagtactaccaagggaagtcccaatcattcacatcgatatctta 367
               ||||| |||||||||||| || |||||||| || |||||||||||||||||||||||| |
Sbjct: 7131584 caggagagggctgtccaactattaccaaggaaaatcccaatcattcacatcgatatctga 7131525

                                                                           
Query: 368     tgctacatgtcttcaagaccttggaaaggaagttacctacagcaagaggatgaagacatg 427
               |||||||||| |||| ||||||| |||| || |||||||||  |||||||||||| | ||
Sbjct: 7131524 tgctacatgtgttcaggaccttgcaaagaaaattacctacaataagaggatgaaggcgtg 7131465

                                                                           
Query: 428     caagagctatacatcaggattaggcatgaagcagcggtcaaatcacttaccaaggacatg 487
               ||| |||||| || ||||| ||| |||||| || || ||||||||||| |||| | ||||
Sbjct: 7131464 caaaagctatgcagcaggactagacatgaatcaacgatcaaatcacttgccaaagccatg 7131405

                                                                           
Query: 488     caacaagatgataacaaagaggtcctcaaaaggttcatttgcttgtcaaatgtccagagc 547
               ||||||||||||| | |||||| |||| ||||| |||||| | ||||   |||| ||| |
Sbjct: 7131404 caacaagatgatagcgaagaggccctcgaaaggatcatttacctgtctgctgtcaagacc 7131345

                                             
Query: 548     aagcagcaccaacctcttgtacagcagtgc 577
               ||||||||||| |||| ||| |||||||||
Sbjct: 7131344 aagcagcaccagcctcctgtgcagcagtgc 7131315



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 222     tcagcatcgtcgagcaccttgcagctgga 250
               |||||||| |||||||| |||||||||||
Sbjct: 7132206 tcagcatcttcgagcacattgcagctgga 7132178
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>dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0495C02
          Length = 151467

 Score =  210 bits (106), Expect = 4e-51
 Identities = 229/270 (84%)
 Strand = Plus / Minus

                                                                          
Query: 308    caggacagggctgtccaagtactaccaagggaagtcccaatcattcacatcgatatctta 367
              ||||| |||||||||||| || |||||||| || |||||||||||||||||||||||| |
Sbjct: 135003 caggagagggctgtccaactattaccaaggaaaatcccaatcattcacatcgatatctga 134944

                                                                          
Query: 368    tgctacatgtcttcaagaccttggaaaggaagttacctacagcaagaggatgaagacatg 427
              |||||||||| |||| ||||||| |||| || |||||||||  |||||||||||| | ||
Sbjct: 134943 tgctacatgtgttcaggaccttgcaaagaaaattacctacaataagaggatgaaggcgtg 134884

                                                                          
Query: 428    caagagctatacatcaggattaggcatgaagcagcggtcaaatcacttaccaaggacatg 487
              ||| |||||| || ||||| ||| |||||| || || ||||||||||| |||| | ||||
Sbjct: 134883 caaaagctatgcagcaggactagacatgaatcaacgatcaaatcacttgccaaagccatg 134824

                                                                          
Query: 488    caacaagatgataacaaagaggtcctcaaaaggttcatttgcttgtcaaatgtccagagc 547
              ||||||||||||| | |||||| |||| ||||| |||||| | ||||   |||| ||| |
Sbjct: 134823 caacaagatgatagcgaagaggccctcgaaaggatcatttacctgtctgctgtcaagacc 134764

                                            
Query: 548    aagcagcaccaacctcttgtacagcagtgc 577
              ||||||||||| |||| ||| |||||||||
Sbjct: 134763 aagcagcaccagcctcctgtgcagcagtgc 134734



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 222    tcagcatcgtcgagcaccttgcagctgga 250
              |||||||| |||||||| |||||||||||
Sbjct: 135625 tcagcatcttcgagcacattgcagctgga 135597
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>dbj|AP005394.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0620H05
          Length = 161808

 Score =  210 bits (106), Expect = 4e-51
 Identities = 229/270 (84%)
 Strand = Plus / Minus

                                                                         
Query: 308   caggacagggctgtccaagtactaccaagggaagtcccaatcattcacatcgatatctta 367
             ||||| |||||||||||| || |||||||| || |||||||||||||||||||||||| |
Sbjct: 31521 caggagagggctgtccaactattaccaaggaaaatcccaatcattcacatcgatatctga 31462

                                                                         
Query: 368   tgctacatgtcttcaagaccttggaaaggaagttacctacagcaagaggatgaagacatg 427
             |||||||||| |||| ||||||| |||| || |||||||||  |||||||||||| | ||
Sbjct: 31461 tgctacatgtgttcaggaccttgcaaagaaaattacctacaataagaggatgaaggcgtg 31402

                                                                         
Query: 428   caagagctatacatcaggattaggcatgaagcagcggtcaaatcacttaccaaggacatg 487
             ||| |||||| || ||||| ||| |||||| || || ||||||||||| |||| | ||||
Sbjct: 31401 caaaagctatgcagcaggactagacatgaatcaacgatcaaatcacttgccaaagccatg 31342

                                                                         
Query: 488   caacaagatgataacaaagaggtcctcaaaaggttcatttgcttgtcaaatgtccagagc 547
             ||||||||||||| | |||||| |||| ||||| |||||| | ||||   |||| ||| |
Sbjct: 31341 caacaagatgatagcgaagaggccctcgaaaggatcatttacctgtctgctgtcaagacc 31282

                                           
Query: 548   aagcagcaccaacctcttgtacagcagtgc 577
             ||||||||||| |||| ||| |||||||||
Sbjct: 31281 aagcagcaccagcctcctgtgcagcagtgc 31252



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 222   tcagcatcgtcgagcaccttgcagctgga 250
             |||||||| |||||||| |||||||||||
Sbjct: 32143 tcagcatcttcgagcacattgcagctgga 32115
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>dbj|AK068719.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162F05, full
           insert sequence
          Length = 1104

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                       
Query: 286 cgctgctagcccagcttcctgccaggacagggctgtccaagtactaccaagggaagtccc 345
           ||||||| || |||||||||  |||||||||||| |||||||||||||||||||||||||
Sbjct: 421 cgctgctggcgcagcttcctctcaggacagggctatccaagtactaccaagggaagtccc 480

                         
Query: 346 aatcattcacatcg 359
           |||| |||||||||
Sbjct: 481 aatccttcacatcg 494
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>dbj|AK068350.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013142H05, full
           insert sequence
          Length = 1176

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                       
Query: 286 cgctgctagcccagcttcctgccaggacagggctgtccaagtactaccaagggaagtccc 345
           ||||||| || |||||||||  |||||||||||| |||||||||||||||||||||||||
Sbjct: 500 cgctgctggcgcagcttcctctcaggacagggctatccaagtactaccaagggaagtccc 559

                         
Query: 346 aatcattcacatcg 359
           |||| |||||||||
Sbjct: 560 aatccttcacatcg 573
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                                    
Query: 308      caggacagggctgtccaagtactaccaagggaagtcccaatcattcacatcg 359
                |||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 21025596 caggacagggctatccaagtactaccaagggaagtcccaatccttcacatcg 21025647
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>dbj|AP004739.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0090E14
          Length = 161119

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                                  
Query: 308    caggacagggctgtccaagtactaccaagggaagtcccaatcattcacatcg 359
              |||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 152520 caggacagggctatccaagtactaccaagggaagtcccaatccttcacatcg 152571
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>dbj|AP003713.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0528E12
          Length = 139750

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                                 
Query: 308   caggacagggctgtccaagtactaccaagggaagtcccaatcattcacatcg 359
             |||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 22597 caggacagggctatccaagtactaccaagggaagtcccaatccttcacatcg 22648
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>gb|AY078275.1| Uncultured bacterium clone nirSAK2 putative dissimilatory nitrite
           reductase gene, partial cds
          Length = 873

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 76  gcgcttggcaagaagaagatcaccctgat 104
           |||||||||||  ||||||||||||||||
Sbjct: 435 gcgcttggcaacgagaagatcaccctgat 463
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>gb|DQ232371.1| Bacterium CYCU-0207 NirS (nirS) gene, partial cds
          Length = 848

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 76  gcgcttggcaagaagaagatcaccctgat 104
           |||||||||||  ||||||||||||||||
Sbjct: 407 gcgcttggcaacgagaagatcaccctgat 435
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>gb|AY752342.1| Nesocichla eremita NADH dehydrogenase subunit 2 (ND2) gene,
           complete cds; mitochondrial
          Length = 1041

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 441 tcaggattaggcatgaagcag 461
           |||||||||||||||||||||
Sbjct: 295 tcaggattaggcatgaagcag 275
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>gb|AY739093.1| Takifugu rubripes frMUT, frGPR136L1, and frGPR136L2 genes, complete
              sequence; frRUNX2 (frRUNX2) gene, complete cds; and
              frCLIC5, frENPP5, frPHIP, frIRAK1BP1, and frTBX18 genes,
              complete sequence
          Length = 235024

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 390    ggaaaggaagttacctacag 409
              ||||||||||||||||||||
Sbjct: 227843 ggaaaggaagttacctacag 227824
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>ref|XM_478829.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1437

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 57  ctgcgccgtgaggccgcctg 76
           ||||||||||||||||||||
Sbjct: 540 ctgcgccgtgaggccgcctg 521
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 445     gattaggcatgaagcagcggtcaaatca 472
               |||| ||||||||| |||||||||||||
Sbjct: 2707377 gattgggcatgaaggagcggtcaaatca 2707404
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>ref|XM_382320.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02144.1)
           partial mRNA
          Length = 819

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 205 gttcttcagggtcatcttca 224
           ||||||||||||||||||||
Sbjct: 298 gttcttcagggtcatcttca 279
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>ref|XM_447173.1| Candida glabrata CBS138, CAGL0H08580g partial mRNA
          Length = 1866

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 416  gatgaagacatgcaagagctatac 439
            |||||||| |||||||||||||||
Sbjct: 1099 gatgaagatatgcaagagctatac 1122
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>gb|AC124259.6| Homo sapiens chromosome 11, clone RP11-21N2, complete sequence
          Length = 99973

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 408   agcaagaggatgaagacatg 427
             ||||||||||||||||||||
Sbjct: 48266 agcaagaggatgaagacatg 48285
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>ref|XM_662608.1| Cryptosporidium hominis TU502 protease (Chro.60016) partial mRNA
          Length = 4710

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 205  gttcttcagggtcatcttca 224
            ||||||||||||||||||||
Sbjct: 4259 gttcttcagggtcatcttca 4278
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 137     cgggtcgtcgttgtgctcattggcgtcg 164
               ||||||||||||| |||||||| |||||
Sbjct: 2205222 cgggtcgtcgttgcgctcattgccgtcg 2205195
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>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence
          Length = 1050361

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 416    gatgaagacatgcaagagctatac 439
              |||||||| |||||||||||||||
Sbjct: 841805 gatgaagatatgcaagagctatac 841782
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>emb|BX538350.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 1/4
          Length = 287050

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   gttcttcagggtcatcttca 224
             ||||||||||||||||||||
Sbjct: 16664 gttcttcagggtcatcttca 16683
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>emb|AL031745.8|PFMAL1P2 Plasmodium falciparum DNA from MAL1P2
          Length = 384550

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 478    caaggacatgcaacaagatgataa 501
              |||||| |||||||||||||||||
Sbjct: 258364 caaggaaatgcaacaagatgataa 258387
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>gb|AY821914.1| Didelphis virginiana blcap (Blcap) gene, complete cds
          Length = 14520

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 503  aaagaggtcctcaaaaggtt 522
            ||||||||||||||||||||
Sbjct: 3794 aaagaggtcctcaaaaggtt 3813
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>gb|AC152833.3| Ornithorhynchus anatinus BAC clone OABb-6A1 from chromosome unknown,
             complete sequence
          Length = 141309

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    ttggcaagaagaagatcacc 99
             ||||||||||||||||||||
Sbjct: 50056 ttggcaagaagaagatcacc 50037
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>gb|AC099329.2| Homo sapiens chromosome 3 clone RP11-70C1, complete sequence
          Length = 167667

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 572    cagtgccaatttacctgcacacca 595
              ||||||||||||||| ||||||||
Sbjct: 160844 cagtgccaatttaccagcacacca 160821
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>gb|AC044810.7| Homo sapiens chromosome 11, clone RP11-494M8, complete sequence
          Length = 194297

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 408    agcaagaggatgaagacatg 427
              ||||||||||||||||||||
Sbjct: 189063 agcaagaggatgaagacatg 189044
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>ref|XM_625346.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd6_60),
            partial mRNA
          Length = 4689

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 205  gttcttcagggtcatcttca 224
            ||||||||||||||||||||
Sbjct: 4259 gttcttcagggtcatcttca 4278
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>gb|AC092043.3| Homo sapiens chromosome 3 clone RP11-141M3, complete sequence
          Length = 176140

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 572   cagtgccaatttacctgcacacca 595
             ||||||||||||||| ||||||||
Sbjct: 88207 cagtgccaatttaccagcacacca 88184
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>ref|XM_395197.2| PREDICTED: Apis mellifera similar to ENSANGP00000021370 (LOC411729),
            mRNA
          Length = 3004

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 215  gtcatcttcagcatcgtcga 234
            ||||||||||||||||||||
Sbjct: 1201 gtcatcttcagcatcgtcga 1182
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 57       ctgcgccgtgaggccgcctg 76
                ||||||||||||||||||||
Sbjct: 23264619 ctgcgccgtgaggccgcctg 23264600
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>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1065_B06
          Length = 113170

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    ctgcgccgtgaggccgcctg 76
             ||||||||||||||||||||
Sbjct: 19877 ctgcgccgtgaggccgcctg 19858
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>gb|AC007012.1|AC007012 Homo sapiens chromosome 16, clone 185J20, complete sequence
          Length = 168731

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 503   aaagaggtcctcaaaaggtt 522
             ||||||||||||||||||||
Sbjct: 90719 aaagaggtcctcaaaaggtt 90700
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>dbj|AP000926.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-762B21, complete
              sequence
          Length = 196972

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 503    aaagaggtcctcaaaaggtt 522
              ||||||||||||||||||||
Sbjct: 127660 aaagaggtcctcaaaaggtt 127679
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>emb|AL731554.13| Mouse DNA sequence from clone RP23-337H1 on chromosome 5, complete
              sequence
          Length = 159200

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 543    agagcaagcagcaccaacct 562
              ||||||||||||||||||||
Sbjct: 111216 agagcaagcagcaccaacct 111235


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,731,448
Number of Sequences: 3902068
Number of extensions: 4731448
Number of successful extensions: 91812
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91609
Number of HSP's gapped (non-prelim): 203
length of query: 598
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 575
effective length of database: 17,143,297,704
effective search space: 9857396179800
effective search space used: 9857396179800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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