ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26p17 |
|---|---|
| Clone Library Name | barley_pub |
>PPE01_MYCTU (Q10892) Hypothetical PPE-family protein PPE1| Length = 463 Score = 32.3 bits (72), Expect = 0.30 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = -3 Query: 255 PGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGV 133 PG +PPTS+P +++ V A PG VPG+ GV Sbjct: 304 PGGSPPTSNPAPAAPSSNSVGSASAAPGISYAVPGLAPPGV 344
>EFTS_ZYMMO (Q9X5E8) Elongation factor Ts (EF-Ts)| Length = 307 Score = 31.2 bits (69), Expect = 0.67 Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 10/84 (11%) Frame = -3 Query: 258 TPGVAPPTSHPVLTVVAASDVHEAVVLPG-HLDVVPGVGVNGVL-TVELQLP------VG 103 T +A + L A +V VV+P H V PGVG GVL +E + P +G Sbjct: 126 TANIATIGENQALRRAALLEVENGVVVPYIHNQVAPGVGKIGVLVALESEAPSDFLESLG 185 Query: 102 LXVLVHIAQVAAIALRPQS--DAA 37 + +H+A +AL S DAA Sbjct: 186 KQIAMHVAAATPLALDEDSLDDAA 209
>AL1A1_RAT (P51647) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)| (Aldehyde dehydrogenase family 1 member A1) (Aldehyde dehydrogenase, cytosolic) (ALHDII) (ALDH-E1) Length = 500 Score = 31.2 bits (69), Expect = 0.67 Identities = 22/78 (28%), Positives = 33/78 (42%) Frame = -3 Query: 264 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLXVLVH 85 G+T V P P+ + AS + EA PG +++VPG G + + V Sbjct: 186 GNTVVVKPAEQTPLTALHMASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTG 245 Query: 84 IAQVAAIALRPQSDAAGK 31 QV + +AAGK Sbjct: 246 STQVGKLI----KEAAGK 259
>AL1A1_MOUSE (P24549) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)| (Aldehyde dehydrogenase family 1 member A1) (Aldehyde dehydrogenase, cytosolic) (ALHDII) (ALDH-E1) Length = 500 Score = 31.2 bits (69), Expect = 0.67 Identities = 22/78 (28%), Positives = 33/78 (42%) Frame = -3 Query: 264 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLXVLVH 85 G+T V P P+ + AS + EA PG +++VPG G + + V Sbjct: 186 GNTVVVKPAEQTPLTALHLASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTG 245 Query: 84 IAQVAAIALRPQSDAAGK 31 QV + +AAGK Sbjct: 246 STQVGKLI----KEAAGK 259
>CHEB3_PSEAE (Q9HXT8) Chemotaxis response regulator protein-glutamate| methylesterase of group 3 operon (EC 3.1.1.61) Length = 335 Score = 30.8 bits (68), Expect = 0.87 Identities = 23/61 (37%), Positives = 29/61 (47%) Frame = -3 Query: 282 RLVCVGGDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVG 103 RLV +G G P S VL + + AVVL H+D V G+ L E +LPV Sbjct: 152 RLVAIGASAGG---PASLAVLLKQLPASFNAAVVLVQHVDEVFAAGMAEWLASESKLPVR 208 Query: 102 L 100 L Sbjct: 209 L 209
>CHB1_LYMDI (P43515) Chorion class B protein Ld10 precursor| Length = 191 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = -3 Query: 270 VGGDTPGVAPPTSHPVLTVVAASDVHEAVV-LPGHLDVVPGVGVNGVL 130 +GG P + PV VVA+ +V+E ++ G L V VGV GVL Sbjct: 78 IGGGLPVSSASAIAPVGLVVASENVYEGILAAAGELPFVGTVGVEGVL 125
>VNS1_AHSV6 (P87505) Nonstructural protein NS1| Length = 548 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/58 (31%), Positives = 29/58 (50%) Frame = -3 Query: 183 VLPGHLDVVPGVGVNGVLTVELQLPVGLXVLVHIAQVAAIALRPQSDAAGKFYFFYHS 10 ++ G L V P G NG + L LP+ + V++ + + A +R AA F F H+ Sbjct: 196 LIEGRLPVCPYTGANGRINAVLHLPLEMEVIMAVQENATQLMR---RAAQDFKFITHA 250
>VNS1_AHSV4 (Q03068) Nonstructural protein NS1 (Hydrophobic tubular protein)| Length = 548 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/58 (31%), Positives = 29/58 (50%) Frame = -3 Query: 183 VLPGHLDVVPGVGVNGVLTVELQLPVGLXVLVHIAQVAAIALRPQSDAAGKFYFFYHS 10 ++ G L V P G NG + L LP+ + V++ + + A +R AA F F H+ Sbjct: 196 LIEGRLPVCPYTGANGRINAVLHLPLEMEVIMAVQENATQLMR---RAAQDFKFITHA 250
>CXI_CONCE (P69494) I-superfamily conotoxin precursor| Length = 67 Score = 30.0 bits (66), Expect = 1.5 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = -2 Query: 232 PPSTYGCSGIGCARGRCASGTLGRRTWCR 146 PP Y + C RGRC SG WCR Sbjct: 31 PPGVYCTRHLPCCRGRCCSG------WCR 53
>AL1A1_MACFA (Q8HYE4) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)| (Aldehyde dehydrogenase family 1 member A1) (Aldehyde dehydrogenase, cytosolic) (ALHDII) (ALDH-E1) Length = 500 Score = 30.0 bits (66), Expect = 1.5 Identities = 20/78 (25%), Positives = 33/78 (42%) Frame = -3 Query: 264 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLXVLVH 85 G+T V P P+ + AS + EA PG +++VPG G + + + Sbjct: 186 GNTVVVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTG 245 Query: 84 IAQVAAIALRPQSDAAGK 31 +V + +AAGK Sbjct: 246 STEVGKLI----KEAAGK 259
>AL1A1_HUMAN (P00352) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)| (Aldehyde dehydrogenase family 1 member A1) (Aldehyde dehydrogenase, cytosolic) (ALHDII) (ALDH-E1) Length = 500 Score = 30.0 bits (66), Expect = 1.5 Identities = 20/78 (25%), Positives = 33/78 (42%) Frame = -3 Query: 264 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLXVLVH 85 G+T V P P+ + AS + EA PG +++VPG G + + + Sbjct: 186 GNTVVVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTG 245 Query: 84 IAQVAAIALRPQSDAAGK 31 +V + +AAGK Sbjct: 246 STEVGKLI----KEAAGK 259
>AL1A1_RABIT (Q8MI17) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)| (Aldehyde dehydrogenase family 1 member A1) (Aldehyde dehydrogenase, cytosolic) (ALHDII) (ALDH-E1) Length = 496 Score = 29.6 bits (65), Expect = 1.9 Identities = 20/78 (25%), Positives = 33/78 (42%) Frame = -3 Query: 264 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLXVLVH 85 G+T V P P+ + AS + EA PG +++VPG G + + + Sbjct: 182 GNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTG 241 Query: 84 IAQVAAIALRPQSDAAGK 31 +V + +AAGK Sbjct: 242 STEVGKLI----KEAAGK 255
>AL1A4_RAT (P13601) Aldehyde dehydrogenase, cytosolic 1 (EC 1.2.1.3) (ALDH| class 1) (ALHDII) (ALDH-E1) (Aldehyde dehydrogenase family 1 member A4) Length = 500 Score = 29.6 bits (65), Expect = 1.9 Identities = 21/78 (26%), Positives = 33/78 (42%) Frame = -3 Query: 264 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLXVLVH 85 G+T V P P+ + AS + EA PG ++VVPG G + + + Sbjct: 186 GNTVIVKPAEQTPLTALYMASLIKEAGFPPGVVNVVPGYGSTAGAAISSHMDIDKVSFTG 245 Query: 84 IAQVAAIALRPQSDAAGK 31 +V + +AAGK Sbjct: 246 STEVGKLI----KEAAGK 259
>VNS1_AHSV9 (Q85967) Nonstructural protein NS1| Length = 548 Score = 29.6 bits (65), Expect = 1.9 Identities = 18/58 (31%), Positives = 29/58 (50%) Frame = -3 Query: 183 VLPGHLDVVPGVGVNGVLTVELQLPVGLXVLVHIAQVAAIALRPQSDAAGKFYFFYHS 10 ++ G L V P GVN + L LP+ + V++ + + A +R AA F F H+ Sbjct: 196 LIEGRLPVCPYTGVNSRINAVLHLPLEMEVIMAVQENATQLMR---RAAQDFKFITHA 250
>KRA55_HUMAN (Q701N2) Keratin-associated protein 5-5 (Keratin-associated protein| 5.5) (Ultrahigh sulfur keratin-associated protein 5.5) (Keratin-associated protein 5-11) (Keratin-associated protein 5.11) Length = 221 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = -2 Query: 217 GCSGIGCARGRCASGTLGRRTWCRG 143 GC G+G G C SG GR + C G Sbjct: 13 GCGGLGSGCGGCGSGCGGRGSGCGG 37
>SYH_STRCO (Q9KXP2) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 425 Score = 29.3 bits (64), Expect = 2.5 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = -3 Query: 324 GLNQGTVGVGQVFFRLVCVGGDTPGVAPPTSHPVLTVVAASDVHEAVVLP 175 G+ + T V + + GGD + P T+ PVL V +++H+A LP Sbjct: 59 GVGESTDIVTKEMYVFETKGGDRLALRPETTAPVLRAVLEANLHKAGNLP 108
>ZF64B_HUMAN (Q9NTW7) Zinc finger protein 64, isoforms 3 and 4 (Zinc finger| protein 338) Length = 645 Score = 28.9 bits (63), Expect = 3.3 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = +1 Query: 67 GCYLRYVHEHGETYRQLQLNGKDTINPYTRYDVQVSRKHNGLVHIRCRYNRK 222 GC+ + VH + R L+++ D + D SRK N +H+RC + K Sbjct: 305 GCHFKTVHGMKDLDRHLRIHTGDKPHKCEFCDKCFSRKDNLTMHMRCHTSVK 356
>ZFP64_MOUSE (Q99KE8) Zinc finger protein 64 (Zfp-64)| Length = 643 Score = 28.9 bits (63), Expect = 3.3 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = +1 Query: 67 GCYLRYVHEHGETYRQLQLNGKDTINPYTRYDVQVSRKHNGLVHIRCRYNRK 222 GC+ + VH + R L+++ D + D SRK N +H+RC + K Sbjct: 303 GCHFKTVHGMKDLDRHLRIHTGDKPHKCEFCDKCFSRKDNLTMHMRCHTSVK 354
>ALDH1_MACPR (Q29490) Aldehyde dehydrogenase, cytosolic 1 (EC 1.2.1.3) (ALDH| class 1) (ETA-crystallin) Length = 501 Score = 28.5 bits (62), Expect = 4.3 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = -3 Query: 264 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVG 145 G+T V P P+ + AS + EA PG +++VPG G Sbjct: 187 GNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYG 226
>ALDH1_ELEED (Q28399) Aldehyde dehydrogenase, cytosolic 1 (EC 1.2.1.3) (ALDH| class 1) (ETA-crystallin) Length = 501 Score = 28.5 bits (62), Expect = 4.3 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = -3 Query: 264 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVG 145 G+T V P P+ + AS + EA PG +++VPG G Sbjct: 187 GNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYG 226
>AL1A1_SHEEP (P51977) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)| (Aldehyde dehydrogenase family 1 member A1) (Aldehyde dehydrogenase, cytosolic) (ALHDII) (ALDH-E1) Length = 500 Score = 28.5 bits (62), Expect = 4.3 Identities = 20/78 (25%), Positives = 32/78 (41%) Frame = -3 Query: 264 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLXVLVH 85 G+T V P P+ + S + EA PG +++VPG G + + V Sbjct: 186 GNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTG 245 Query: 84 IAQVAAIALRPQSDAAGK 31 +V + +AAGK Sbjct: 246 STEVGKLI----KEAAGK 259
>AL1A1_HORSE (P15437) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)| (Aldehyde dehydrogenase family 1 member A1) (Aldehyde dehydrogenase, cytosolic) (ALHDII) (ALDH-E1) Length = 500 Score = 28.5 bits (62), Expect = 4.3 Identities = 19/78 (24%), Positives = 33/78 (42%) Frame = -3 Query: 264 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLXVLVH 85 G+T V P P+ + A+ + EA PG +++VPG G + + + Sbjct: 186 GNTVVVKPAEQTPLSALHVATLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTG 245 Query: 84 IAQVAAIALRPQSDAAGK 31 +V + +AAGK Sbjct: 246 STEVGKLI----KEAAGK 259
>AL1A1_BOVIN (P48644) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)| (Aldehyde dehydrogenase family 1 member A1) (Aldehyde dehydrogenase, cytosolic) (ALHDII) (ALDH-E1) Length = 500 Score = 28.5 bits (62), Expect = 4.3 Identities = 20/78 (25%), Positives = 32/78 (41%) Frame = -3 Query: 264 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVNGVLTVELQLPVGLXVLVH 85 G+T V P P+ + S + EA PG +++VPG G + + V Sbjct: 186 GNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTG 245 Query: 84 IAQVAAIALRPQSDAAGK 31 +V + +AAGK Sbjct: 246 STEVGKLI----KEAAGK 259
>FBX46_MOUSE (Q8BG80) F-box only protein 46 (F-box only protein 34-like)| Length = 603 Score = 28.1 bits (61), Expect = 5.6 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = +1 Query: 148 YTRYDVQVSRKHNGLVHIRCRYNRKYWVARRRGD 249 Y + DV + R H H Y R YW+ RR D Sbjct: 537 YEKGDVSLCRWHPKPYHHDLPYGRSYWMCCRRAD 570
>FBPC_ACTPL (Q57293) Ferric cations import ATP-binding protein fbpC (EC| 3.6.3.30) Length = 348 Score = 28.1 bits (61), Expect = 5.6 Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 9/68 (13%) Frame = -3 Query: 333 CDDGLNQGTVGVGQVFFRL-------VCVGGDTPGVAPPTSHPVLTVVAAS--DVHEAVV 181 CD LNQGTV +G F L V G GV P T + + AV Sbjct: 242 CDGNLNQGTVSIGDYRFPLHNAADFSVADGACLVGVRPEAIRLTATGETSQRCQIKSAVY 301 Query: 180 LPGHLDVV 157 + H ++V Sbjct: 302 MGNHWEIV 309
>SYFA_FUSNN (Q8RHB4) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 338 Score = 28.1 bits (61), Expect = 5.6 Identities = 12/39 (30%), Positives = 22/39 (56%) Frame = +1 Query: 1 PAAAVVEEVELPSCIALRSQSNGCYLRYVHEHGETYRQL 117 P+ + + L I LR+Q++ +RY+ EHG +R + Sbjct: 151 PSRDLTDTFYLNDSIVLRTQTSPVQIRYMLEHGTPFRMI 189
>SHAN2_RAT (Q9QX74) SH3 and multiple ankyrin repeat domains protein 2 (Shank2)| (Proline-rich synapse-associated protein 1) (ProSAP1) (Cortactin-binding protein 1) (CortBP1) (GKAP/SAPAP-interacting protein) (SPANK-3) Length = 1474 Score = 28.1 bits (61), Expect = 5.6 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -3 Query: 240 PTSHPVLTVVAASDVHEAVVLPGHLDVVPGVGVN 139 P + P T+VAA V EAV+LP + P V+ Sbjct: 992 PAAAPGRTIVAAGSVEEAVILPFRIPPPPLASVD 1025
>FBX46_HUMAN (Q6PJ61) F-box only protein 46 (F-box only protein 34-like)| Length = 646 Score = 28.1 bits (61), Expect = 5.6 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = +1 Query: 148 YTRYDVQVSRKHNGLVHIRCRYNRKYWVARRRGD 249 Y + DV + R H H Y R YW+ RR D Sbjct: 537 YEKGDVSLCRWHPKPYHHDLPYGRSYWMCCRRAD 570
>SMD3_SCHPO (Q9UUC6) Probable small nuclear ribonucleoprotein Sm D3 (snRNP core| protein D3) (Sm-D3) Length = 97 Score = 28.1 bits (61), Expect = 5.6 Identities = 17/60 (28%), Positives = 29/60 (48%) Frame = +1 Query: 40 CIALRSQSNGCYLRYVHEHGETYRQLQLNGKDTINPYTRYDVQVSRKHNGLVHIRCRYNR 219 CI L ++ G + E+G TYR + +D +N R D+ V+ + + H+ Y R Sbjct: 4 CIKLLHETQGHIVTMELENGSTYRGKLIEAEDNMNCQMR-DISVTARDGRVSHLDQVYIR 62
>KRA52_HUMAN (Q701N4) Keratin-associated protein 5-2 (Keratin-associated protein| 5.2) (Ultrahigh sulfur keratin-associated protein 5.2) (Keratin-associated protein 5-8) (Keratin-associated protein 5.8) Length = 177 Score = 28.1 bits (61), Expect = 5.6 Identities = 12/25 (48%), Positives = 13/25 (52%) Frame = -2 Query: 217 GCSGIGCARGRCASGTLGRRTWCRG 143 GC G G RG C SG G + C G Sbjct: 27 GCGGCGSGRGGCGSGCGGCSSSCGG 51
>CHHA2_BOMMO (P05687) Chorion class high-cysteine HCA protein 12 precursor| (HC-A.12) Length = 124 Score = 28.1 bits (61), Expect = 5.6 Identities = 11/23 (47%), Positives = 11/23 (47%) Frame = -2 Query: 217 GCSGIGCARGRCASGTLGRRTWC 149 GC G GC G C GRR C Sbjct: 101 GCGGCGCGCGGCGGCGCGRRCCC 123
>PROC_RABIT (Q28661) Vitamin K-dependent protein C precursor (EC 3.4.21.69)| (Autoprothrombin IIA) (Anticoagulant protein C) (Blood coagulation factor XIV) [Contains: Vitamin K-dependent protein C light chain; Vitamin K-dependent protein C heavy chain; Act Length = 458 Score = 27.7 bits (60), Expect = 7.4 Identities = 12/31 (38%), Positives = 13/31 (41%) Frame = -2 Query: 229 PSTYGCSGIGCARGRCASGTLGRRTWCRG*W 137 PS + CS C G CA G C G W Sbjct: 90 PSEHPCSSQCCGHGTCADSIGGFSCQCHGGW 120
>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor| Length = 1161 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/28 (50%), Positives = 15/28 (53%) Frame = +2 Query: 92 STXRPTGSCSSTVRTPLTPTPGTTSKCP 175 ST T S S+T T TPT TTS P Sbjct: 246 STTPTTSSTSTTPTTSTTPTTSTTSTAP 273
>BMX_HUMAN (P51813) Cytoplasmic tyrosine-protein kinase BMX (EC 2.7.10.2)| (Bone marrow tyrosine kinase gene in chromosome X protein) (Epithelial and endothelial tyrosine kinase) (ETK) (NTK38) Length = 675 Score = 27.3 bits (59), Expect = 9.6 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = +1 Query: 28 ELPSCIALRSQSNGCYLRYVHEHGETYRQLQL 123 E P I SNGC L Y+ HG+ QL Sbjct: 482 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQL 513
>DPO3_OCEIH (Q8EQU6) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)| Length = 1428 Score = 27.3 bits (59), Expect = 9.6 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +1 Query: 76 LRYVHEHGETYRQLQLNGKDTINPYTRY 159 + Y+HEH + YRQ+ L G NP +R+ Sbjct: 729 VHYLHEHDKQYRQI-LIGSQAGNPLSRH 755
>CARB_THEMA (Q9WZ27) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1099 Score = 27.3 bits (59), Expect = 9.6 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = -3 Query: 306 VGVGQVFFRLVCVGGDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHL 166 +G+G+ F G PT+ +L VA D EAV L HL Sbjct: 926 MGIGEDFAEAFAKAQIAAGNPLPTTGAILATVADKDKREAVPLLAHL 972
>AL1A1_CHICK (P27463) Retinal dehydrogenase 1 (EC 1.2.1.36) (RalDH1) (RALDH 1)| (Aldehyde dehydrogenase family 1 member A1) (Aldehyde dehydrogenase, cytosolic) (ALHDII) (ALDH-E1) Length = 509 Score = 27.3 bits (59), Expect = 9.6 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -3 Query: 264 GDTPGVAPPTSHPVLTVVAASDVHEAVVLPGHLDVVPGVG 145 G+T V P P+ + S + EA PG +++VPG G Sbjct: 195 GNTVVVKPAEQTPLSALYMGSLIKEAGFPPGVVNIVPGFG 234 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,685,310 Number of Sequences: 219361 Number of extensions: 846210 Number of successful extensions: 3391 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 3259 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3389 length of database: 80,573,946 effective HSP length: 89 effective length of database: 61,050,817 effective search space used: 1465219608 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
