ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd27e16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ADEN_ADEB4 (O71150) Adenain (EC 3.4.22.39) (Endoprotease) (Late ... 30 1.4
2KCNA2_XENLA (P22739) Potassium voltage-gated channel subfamily A... 28 5.5

>ADEN_ADEB4 (O71150) Adenain (EC 3.4.22.39) (Endoprotease) (Late L3 23 kDa|
           protein)
          Length = 201

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -3

Query: 258 RNLNDASPAQRPCDPSSYHESSD 190
           ++LN ASP+  P DPSS H++ D
Sbjct: 147 QSLNGASPSLTPSDPSSLHKNQD 169



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>KCNA2_XENLA (P22739) Potassium voltage-gated channel subfamily A member 2|
           (Voltage-gated potassium channel subunit Kv1.2) (xSHA2)
          Length = 499

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 105 NYYGYPSSTYHQTNYN*FNEPFAV 34
           NYY YP+ST      N F +PF +
Sbjct: 201 NYYSYPNSTVRFQKSNTFTDPFFI 224


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,651,947
Number of Sequences: 219361
Number of extensions: 913925
Number of successful extensions: 1819
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1819
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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