ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd26p05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1WBS22_MOUSE (Q9CY21) Putative methyltransferase WBSCR22 (EC 2.1.... 133 1e-31
2WBS22_HUMAN (O43709) Putative methyltransferase WBSCR22 (EC 2.1.... 130 6e-31
3YAU6_SCHPO (Q10162) Hypothetical methyltransferase C26A3.06 in c... 84 9e-17
4BUD23_YEAST (P25627) Putative methyltransferase BUD23 (EC 2.1.1.... 78 5e-15
5BIOC_SERMA (P36571) Biotin synthesis protein bioC 29 3.5
6VE1_HPV19 (Q02048) Replication protein E1 (EC 3.6.1.-) (ATP-depe... 28 5.9
7CI010_HUMAN (Q9NZB2) Protein C9orf10 28 5.9

>WBS22_MOUSE (Q9CY21) Putative methyltransferase WBSCR22 (EC 2.1.1.-)|
           (Williams-Beuren syndrome chromosome region 22 protein
           homolog)
          Length = 281

 Score =  133 bits (335), Expect = 1e-31
 Identities = 64/100 (64%), Positives = 75/100 (75%)
 Frame = +2

Query: 2   KYTQNSRMIEIXTQMSERAEELLSLPEDQPCFXXXXXXXXXXXXXYISEEGHHWVGIXXS 181
           KY +NSRMI+I T+M+ERA ELL LPE QP +             YISEEGH+WVGI  S
Sbjct: 25  KYVRNSRMIDIQTKMTERALELLCLPEGQPSYLLDIGCGSGLSGDYISEEGHYWVGIDIS 84

Query: 182 SAMLDVALEREAEGDLIXGDMGQGIPFRPGTFDGCISISA 301
            AMLD AL+R+ EGDL+ GDMGQG+PFRPG+FDGCISISA
Sbjct: 85  PAMLDAALDRDTEGDLLLGDMGQGVPFRPGSFDGCISISA 124



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>WBS22_HUMAN (O43709) Putative methyltransferase WBSCR22 (EC 2.1.1.-)|
           (Williams-Beuren syndrome chromosome region 22 protein)
          Length = 281

 Score =  130 bits (328), Expect = 6e-31
 Identities = 61/100 (61%), Positives = 76/100 (76%)
 Frame = +2

Query: 2   KYTQNSRMIEIXTQMSERAEELLSLPEDQPCFXXXXXXXXXXXXXYISEEGHHWVGIXXS 181
           KY +NSRMI+I T+M+ RA ELL LPE++PC+             Y+S+EGH+WVG+  S
Sbjct: 25  KYVRNSRMIDIQTRMAGRALELLYLPENKPCYLLDIGCGTGLSGSYLSDEGHYWVGLDIS 84

Query: 182 SAMLDVALEREAEGDLIXGDMGQGIPFRPGTFDGCISISA 301
            AMLD A++RE EGDL+ GDMGQGIPF+PGTFDGCISISA
Sbjct: 85  PAMLDEAVDREIEGDLLLGDMGQGIPFKPGTFDGCISISA 124



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>YAU6_SCHPO (Q10162) Hypothetical methyltransferase C26A3.06 in chromosome I|
          Length = 268

 Score = 84.0 bits (206), Expect = 9e-17
 Identities = 50/101 (49%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   KYTQNSRMIEIXTQMSERAEELLSLPEDQPCFXXXXXXXXXXXXXYISEEGHHWVGIXXS 181
           KY+ N+R+  I T+MSERA ELL    + P F                 +GH  VG+  S
Sbjct: 21  KYSTNTRIQSIQTEMSERALELLDA--EGPSFILDIGCGSGISTQIGESQGHVVVGMDIS 78

Query: 182 SAMLDVALE-REAEGDLIXGDMGQGIPFRPGTFDGCISISA 301
            +ML VALE +E EGDL+  DMG G+PFRPGTFDG ISISA
Sbjct: 79  PSMLSVALESQEIEGDLLLCDMGTGVPFRPGTFDGVISISA 119



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>BUD23_YEAST (P25627) Putative methyltransferase BUD23 (EC 2.1.1.-) (Bud site|
           selection protein 23)
          Length = 275

 Score = 78.2 bits (191), Expect = 5e-15
 Identities = 47/102 (46%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
 Frame = +2

Query: 2   KYTQNSRMIEIXTQMSERAEELLSLPEDQPC-FXXXXXXXXXXXXXYISEEGHH-WVGIX 175
           KYT ++R+  I  +M+ RA ELL+L   QPC F              +++EG H W G+ 
Sbjct: 21  KYTGSTRVQHIQAKMTLRALELLNL---QPCSFILDIGCGSGLSGEILTQEGDHVWCGLD 77

Query: 176 XSSAMLDVALEREAEGDLIXGDMGQGIPFRPGTFDGCISISA 301
            S +ML   L RE EGDL+  DMG GIPFR G+FD  ISISA
Sbjct: 78  ISPSMLATGLSRELEGDLMLQDMGTGIPFRAGSFDAAISISA 119



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>BIOC_SERMA (P36571) Biotin synthesis protein bioC|
          Length = 255

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +2

Query: 146 EEGHHWVGIXXSSAMLDVALEREAEGDLIXGDMGQGIPFRPGTFDGCIS 292
           E G     +  +  MLDVA +R+A    + GD+ Q +P      D C S
Sbjct: 66  ERGKRVTALDLAPGMLDVARQRQAAHHYLLGDIEQ-VPLPDAAMDICFS 113



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>VE1_HPV19 (Q02048) Replication protein E1 (EC 3.6.1.-) (ATP-dependent|
           helicase E1)
          Length = 604

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -3

Query: 299 LRY*YSHQKFQGGREFPGPYPXKLNLLPLHVLMPHLTWQSXY 174
           + Y Y H + QG  EFP P+P K +  P   L    +W+S +
Sbjct: 529 VNYRYLHSRIQGF-EFPNPFPMKADNTPQFELTDQ-SWKSFF 568



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>CI010_HUMAN (Q9NZB2) Protein C9orf10|
          Length = 1069

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
 Frame = -3

Query: 266 GGREFPGPYPXKLNL---LPLHVLMPHLTWQSXYXFQPSDVPLQRCNXHSXQIHIPHPEE 96
           GG    GPYP  L+    L L     +LT Q+ Y    S++P      H  + H P  E 
Sbjct: 385 GGAPGQGPYPYSLSEPAPLTLDTSGKNLTEQNSY----SNIP------HEGK-HTPLYER 433

Query: 95  SKADLQVNSGVPLHVQTSVXEFQSXGSSA 9
           S       SG P HV ++     S  SS+
Sbjct: 434 SSPINPAQSGSPNHVDSAYFPGSSTSSSS 462


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,725,456
Number of Sequences: 219361
Number of extensions: 587657
Number of successful extensions: 1121
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1118
length of database: 80,573,946
effective HSP length: 75
effective length of database: 64,121,871
effective search space used: 1538924904
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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