>DLGP3_RAT (P97838) Disks large-associated protein 3 (DAP-3)|
           (SAP90/PSD-95-associated protein 3) (SAPAP3)
           (PSD-95/SAP90-binding protein 3)
          Length = 977

 Score = 32.7 bits (73), Expect = 0.64
 Identities = 21/55 (38%), Positives = 31/55 (56%)
 Frame = -1

Query: 329 RESLDSVARKRTMMLEKMKRHLGVAIAEAAEGSDTKRKALRQEQACGTQVTMDKR 165
           RE L S+AR+R     K +  +GV + E    SDT+ ++ R+  + G QV  DKR
Sbjct: 617 REELRSLARQR-----KWRPSIGVQV-ETISDSDTENRSRREFHSIGVQVEEDKR 665

>DLGP3_MOUSE (Q6PFD5) Disks large-associated protein 3 (DAP-3)|
           (SAP90/PSD-95-associated protein 3) (SAPAP3)
           (PSD-95/SAP90-binding protein 3)
          Length = 977

 Score = 32.7 bits (73), Expect = 0.64
 Identities = 21/55 (38%), Positives = 31/55 (56%)
 Frame = -1

Query: 329 RESLDSVARKRTMMLEKMKRHLGVAIAEAAEGSDTKRKALRQEQACGTQVTMDKR 165
           RE L S+AR+R     K +  +GV + E    SDT+ ++ R+  + G QV  DKR
Sbjct: 617 REELRSLARQR-----KWRPSIGVQV-ETISDSDTENRSRREFHSIGVQVEEDKR 665

>DLGP3_HUMAN (O95886) Disks large-associated protein 3 (DAP-3)|
           (SAP90/PSD-95-associated protein 3) (SAPAP3)
           (PSD-95/SAP90-binding protein 3)
          Length = 979

 Score = 32.7 bits (73), Expect = 0.64
 Identities = 21/55 (38%), Positives = 31/55 (56%)
 Frame = -1

Query: 329 RESLDSVARKRTMMLEKMKRHLGVAIAEAAEGSDTKRKALRQEQACGTQVTMDKR 165
           RE L S+AR+R     K +  +GV + E    SDT+ ++ R+  + G QV  DKR
Sbjct: 619 REELRSLARQR-----KWRPSIGVQV-ETISDSDTENRSRREFHSIGVQVEEDKR 667

>LTBP4_MOUSE (Q8K4G1) Latent transforming growth factor beta-binding protein 4|
           precursor (LTBP-4)
          Length = 1666

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
 Frame = +2

Query: 56  KPRAQPNSAPLPRKPPWPE-----ATQAGSRAYPKPLFLAWPSYP 175
           +PR +P S P P   P PE      +Q    + P+P    WP +P
Sbjct: 526 EPRPRPESRPRPEPRPRPEPRPQPESQPRPESRPRPESQPWPEFP 570

>PKNH_MYCTU (Q11053) Probable serine/threonine-protein kinase pknH (EC|
           2.7.11.1)
          Length = 626

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +2

Query: 59  PRAQPNSAPLPRKPPWPEATQAGSRAYPKPLFLAWPSYPW*PGCR 193
           P   P +A  PR+PP P  T  G +  PKP +   P+ P   G R
Sbjct: 305 PPTMPATAMAPRQPPAPPVTPPGVQPAPKPSYTP-PAQPGPAGQR 348

>BCTN7_SHEEP (P50415) Bactenecin-7 precursor (Bac7) (Cathelicidin-3) (PR-59)|
          Length = 190

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +2

Query: 56  KPRAQPNSAPLPRKPPWPEATQAGSRAYPKPLFLAW 163
           +PR +P S PLPR  P         R  P+P+ L W
Sbjct: 146 RPRPRPRSLPLPRPQP---------RRIPRPILLPW 172

>XG_HUMAN (P55808) Glycoprotein Xg precursor (Protein PBDX)|
          Length = 180

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 11/58 (18%)
 Frame = +2

Query: 8   FLVFFMHM-------LAVLFAIAKPRAQPNSAPLPR-KPPW---PEATQAGSRAYPKP 148
           FL F MH        LA      +P  +PNS   P+ KPP+   PE   +G   YP+P
Sbjct: 12  FLCFLMHARGQRDFDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPDSGGNIYPRP 69

>GPMB_SALTY (Q8ZJU8) Probable phosphoglycerate mutase gpmB (EC 5.4.2.1)|
           (Phosphoglyceromutase) (PGAM)
          Length = 215

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -1

Query: 320 LDSVARKRTMMLEKMKRHLGVAIAEAAEGSDTKRKALRQEQACGTQVTMDKRAK 159
           L +   ++ M + +  R LG+    +++   TKR A    QACG  +T D R +
Sbjct: 28  LTAKGEQQAMQVGERARSLGITHIISSDLGRTKRTAEIIAQACGCDITFDSRLR 81

>NU214_DROME (Q9W1X4) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)|
            (214 kDa nucleoporin) (DNup214)
          Length = 1711

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +2

Query: 47   AIAKPRAQPNSAPLPRKPPWPEATQAGSRAYPKPLFLAWPSYP 175
            A   P + P+ AP P   P P+AT   +   PKP+    PS P
Sbjct: 896  AAVAPPSPPDVAPTPAVAPMPQATVTVAPPLPKPM----PSIP 934

>PTPA1_NEUCR (Q7S6M5) Serine/threonine-protein phosphatase 2A activator 1 (EC|
           5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-1)
           (PPIase PTPA-1) (Rotamase PTPA-1) (Phosphotyrosyl
           phosphatase activator 1)
          Length = 617

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
 Frame = -2

Query: 217 RPSGKNRHAAPRLPWIRGPSQEERLWISPGAGLC---SLWPWRFSWQRGA 77
           RPSG         PW + P+Q     I  GAG+    +  PW  S   GA
Sbjct: 512 RPSGPGGVTGTAAPWAQAPAQAPAAGIGAGAGMAPPMTAAPWARSTGAGA 561

>RRP3_YARLI (Q6CH58) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)|
          Length = 480

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 19/66 (28%), Positives = 34/66 (51%)
 Frame = +1

Query: 307 ATESRLSRNSARSTSTSEDDIDAVVRELVAFTHAIKETHAAEEIVKAEQEVSVRMTTQQL 486
           ATE R+ R     + +  +D DA+ +E++  T   K  +  EE  K+    S   T+ ++
Sbjct: 4   ATEKRVKRAKKEESGSESEDNDAIAQEILDTT---KSDNEEEEPKKS----SKNYTSVEV 56

Query: 487 DQCEEE 504
           D+ EE+
Sbjct: 57  DESEEQ 62

>POL_COYMV (P19199) Putative polyprotein [Contains: Coat protein; Protease (EC|
           3.4.23.-); Reverse transcriptase (EC 2.7.7.49);
           Ribonuclease H (EC 3.1.26.4)]
          Length = 1886

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 18/69 (26%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
 Frame = +1

Query: 304 LATESRLSRNSARSTSTSEDDIDAVVRELVAFTHAIKETHAAEEIV--KAEQEVSVRMTT 477
           L  ESR SR+S+ S+++ +DD++ +VR +       ++   A++ +  +A++E  +    
Sbjct: 447 LDNESR-SRSSSASSTSMQDDVEEIVRLMKEMRMKKQKKKKAQQALSSQAQEEPIIEENI 505

Query: 478 QQLDQCEEE 504
           ++  Q +EE
Sbjct: 506 EENKQAQEE 514

>PDCD7_HUMAN (Q8N8D1) Programmed cell death protein 7 (ES18) (HES18)|
          Length = 485

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = -1

Query: 329 RESLDSVARKRTMMLEKMKRHLGVAIAEAAEGSDTKRKALRQEQACGTQVTMDKRAKPRR 150
           R  L+ V R+R  + E+ +       AEAA   + +++  R    C  +V   KR +  +
Sbjct: 236 RRRLERVRRRRLRLRERAREREAEREAEAARAVEREQEIDRWRVKCVQEVEEKKREQELK 295

Query: 149 AALD 138
           AA D
Sbjct: 296 AAAD 299

>MILK1_HUMAN (Q8N3F8) Molecule interacting with Rab13 (MIRab13) (MICAL-like|
           protein 1)
          Length = 863

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = +2

Query: 50  IAKPRAQPNSA---PLPRK-PPWPEATQAGSRAYPKPL 151
           + KPR  P  +   P PRK PPW    QA  +  P PL
Sbjct: 349 VPKPRGTPKPSEGTPAPRKDPPWITLVQAEPKKKPAPL 386

>LWA_ANTEL (Q16992) LWamide neuropeptides precursor [Contains: LWamide I;|
           Metamorphosin A (LWamide II) (MMA); LWamide III; LWamide
           IV; LWamide V; LWamide VI; LWamide VII; LWamide VIII;
           LWamide IX]
          Length = 514

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
 Frame = -2

Query: 232 ATQRGRPSGKNRHAAPRLPWIRGPSQEERLW-ISPGAGLCSLWPWRFS---WQRGA 77
           A +  +   K R AAP+ P + G  Q+  LW  S  AG   LW  R S   W R A
Sbjct: 60  AEEESKEEDKKRSAAPQQPGLWGKRQKIGLWGRSADAGQPGLWGKRQSPGLWGRSA 115

>NEDD4_HUMAN (P46934) E3 ubiquitin-protein ligase NEDD4 (EC 6.3.2.-)|
          Length = 1000

 Score = 24.6 bits (52), Expect(2) = 8.4
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
 Frame = +2

Query: 62  RAQPNSAPLPRKPPW---PEATQAGSRAYPKPL 151
           RA P++ P PR PP    P    A  R +P  L
Sbjct: 11  RAPPHALPTPRAPPRAPPPSPRSARRRPFPAAL 43



 Score = 22.7 bits (47), Expect(2) = 8.4
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 229 SLPSAASAIATPKCLFIFSNIIVLFLATESRLSRNSARSTSTS 357
           +LP AASA +  + L      ++LFL      SR S+ S++ +
Sbjct: 42  ALPGAASARSPREALLSLRERLLLFLQLFPASSRFSSSSSTVA 84

>PRP_PIG (Q95JC9) Basic proline-rich protein precursor [Contains:|
           Proline-rich peptide SP-A (PRP-SP-A); Proline-rich
           peptide SP-B (PRP-SP-B); Parotid hormone (PH-Ab)]
          Length = 676

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = +2

Query: 53  AKPRAQPNSAPLPRKPPWPEATQAGSRAYPKPLFLA-WPSYPW*PGCRMP 199
           A P A+P   P P  PP P     G+R  P P  L   P  P  PG R P
Sbjct: 220 APPGARPPPGPPPPGPPPPGPAPPGARPPPGPPPLGPPPPGPAPPGARPP 269

>GPMB_SALTI (Q8Z0T4) Probable phosphoglycerate mutase gpmB (EC 5.4.2.1)|
           (Phosphoglyceromutase) (PGAM)
          Length = 215

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -1

Query: 320 LDSVARKRTMMLEKMKRHLGVAIAEAAEGSDTKRKALRQEQACGTQVTMDKRAK 159
           L +   ++ M + +  R LG+    +++   TKR A    QACG  +T D R +
Sbjct: 28  LTAKGEQQAMQVGERARSLGITHIISSDLGRTKRTAEIIAQACGCDITFDFRLR 81

>FILA_HUMAN (P20930) Filaggrin|
          Length = 4061

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 246  SGRRKRHKEEGPQARTGMRHPGYH 175
            S  R  H     Q+R G RHPG+H
Sbjct: 1289 SASRNHHGSSREQSRDGSRHPGFH 1312


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,760,639
Number of Sequences: 219361
Number of extensions: 1439989
Number of successful extensions: 5715
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5669
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4085413911
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)