| Clone Name | basd27e08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | PRP2_MOUSE (P05142) Proline-rich protein MP-2 precursor | 30 | 1.9 | 2 | SYNP2_MOUSE (Q91YE8) Synaptopodin-2 (Myopodin) | 30 | 1.9 | 3 | SYNP2_HUMAN (Q9UMS6) Synaptopodin-2 (Myopodin) (Genethonin 2) | 29 | 2.5 | 4 | 5E5_RAT (Q63003) 5E5 antigen | 28 | 4.2 | 5 | K1683_HUMAN (Q9H0B3) Protein KIAA1683 | 28 | 5.5 | 6 | PKHA4_MOUSE (Q8VC98) Pleckstrin homology domain-containing famil... | 28 | 7.2 | 7 | MOK13_SCHPO (Q9Y719) Cell wall alpha-1,3-glucan synthase mok13 (... | 27 | 9.4 |
|---|
>PRP2_MOUSE (P05142) Proline-rich protein MP-2 precursor| Length = 261 Score = 29.6 bits (65), Expect = 1.9 Identities = 16/28 (57%), Positives = 16/28 (57%) Frame = -2 Query: 163 PQLVFPQGPPWVEVNIPRPASGPCLPPP 80 PQL PQGPP PRP GP PPP Sbjct: 142 PQLRPPQGPPPPAGPQPRPPQGP--PPP 167
>SYNP2_MOUSE (Q91YE8) Synaptopodin-2 (Myopodin)| Length = 1087 Score = 29.6 bits (65), Expect = 1.9 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 9/39 (23%) Frame = -2 Query: 166 SPQLVFPQGPPWVEVNIP---------RPASGPCLPPPW 77 SP FP PP+ V+ P P +GP PPPW Sbjct: 603 SPISDFPAPPPYSAVSPPPEAFSRGVSSPVAGPAQPPPW 641
>SYNP2_HUMAN (Q9UMS6) Synaptopodin-2 (Myopodin) (Genethonin 2)| Length = 1093 Score = 29.3 bits (64), Expect = 2.5 Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 9/39 (23%) Frame = -2 Query: 166 SPQLVFPQGPPWVEVNIP---------RPASGPCLPPPW 77 SP FP PP+ V P P +GP PPPW Sbjct: 611 SPIADFPAPPPYSAVTPPPDAFSRGVSSPIAGPAQPPPW 649
>5E5_RAT (Q63003) 5E5 antigen| Length = 825 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -2 Query: 166 SPQLVFPQGPPWVEVNIPRPASGPCLPPP 80 SP+ FP G P E +PRP + P P P Sbjct: 138 SPEGAFPGGGPAEEEGVPRPRAPPEPPDP 166
>K1683_HUMAN (Q9H0B3) Protein KIAA1683| Length = 1180 Score = 28.1 bits (61), Expect = 5.5 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Frame = -2 Query: 229 QLVRFQYPSEEQLRPQCS**ISPQLVF---PQGPPWVEVNIPRPASGPCLPPP 80 Q VRFQ+P E +L +SP ++ Q P + + RP S P L PP Sbjct: 169 QQVRFQHPEENRL-------LSPPIMVNKETQFPSCDNLVLCRPQSSPLLQPP 214
>PKHA4_MOUSE (Q8VC98) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 588 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -2 Query: 166 SPQLVFPQGPPWVEVNIPRPASGPCLPPP 80 SP+L P P +++PRP S P PP Sbjct: 229 SPELFSPLSRPPSPLSLPRPRSAPARRPP 257
>MOK13_SCHPO (Q9Y719) Cell wall alpha-1,3-glucan synthase mok13 (EC 2.4.1.183)| Length = 2358 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/63 (28%), Positives = 30/63 (47%) Frame = -3 Query: 342 SFLRSLIAFLCGRNGFFRFWLFHLRSFTFFLNRSSGLISW*GFSILLRNNFGHSARSRFL 163 SFL I+ N + R W+ H+ S+ + + +SG S+ NFG A + + Sbjct: 2001 SFLLIGISSFINENMYLRLWISHIASWIYAVASASG-------SLYFSLNFGDEAGAG-V 2052 Query: 162 LSW 154 +SW Sbjct: 2053 VSW 2055 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.310 0.123 0.325 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,906,335 Number of Sequences: 219361 Number of extensions: 618646 Number of successful extensions: 1334 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1259 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1332 length of database: 80,573,946 effective HSP length: 94 effective length of database: 59,954,012 effective search space used: 1438896288 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)