ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd27d22 |
|---|---|
| Clone Library Name | barley_pub |
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 255 bits (651), Expect = 9e-68 Identities = 132/207 (63%), Positives = 161/207 (77%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKAVAGEAG+PFFS+S SEFVEMFVG GA+RVRDLF++AK AP Sbjct: 196 GVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKANAPC 255 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+FIDE+DAVG RG NDER+QTLNQLLTEMDGF+ + +I++AATNRP LDSA Sbjct: 256 IVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNTGIIIVAATNRPDVLDSA 315 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R+V V PD GRR+IL VH R L +D ++ D +A TPG GADL+N+ Sbjct: 316 LMRPGRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDL--DKIARRTPGFTGADLSNL 373 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 +NEAA+LAARR ++ +++ DAI+R Sbjct: 374 LNEAAILAARRNLTEISMDEVNDAIDR 400
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 254 bits (650), Expect = 1e-67 Identities = 135/207 (65%), Positives = 160/207 (77%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKAVAGEAG+PFFS+S S+FVEMFVG GA+RVR LF++AK+AAP+ Sbjct: 222 GVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPA 281 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DAVG RG NDER+QTLNQLL EMDGF+ + +IV+AATNR LD A Sbjct: 282 IIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPA 341 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF RKV VG PD++GR IL VH + PL ED ++ LVA TPG VGADL N+ Sbjct: 342 LLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDL--KLVAQQTPGFVGADLENV 399 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 +NEAAL+AARR I+ DI +A +R Sbjct: 400 LNEAALVAARRNKSIIDASDIDEAEDR 426
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 254 bits (650), Expect = 1e-67 Identities = 135/207 (65%), Positives = 160/207 (77%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKAVAGEAG+PFFS+S S+FVEMFVG GA+RVR LF++AK+AAP+ Sbjct: 222 GVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPA 281 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DAVG RG NDER+QTLNQLL EMDGF+ + +IV+AATNR LD A Sbjct: 282 IIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPA 341 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF RKV VG PD++GR IL VH + PL ED ++ LVA TPG VGADL N+ Sbjct: 342 LLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDL--KLVAQQTPGFVGADLENV 399 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 +NEAAL+AARR I+ DI +A +R Sbjct: 400 LNEAALVAARRNKSIIDASDIDEAEDR 426
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 254 bits (648), Expect = 2e-67 Identities = 132/207 (63%), Positives = 157/207 (75%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKA+AGEAG+PFFS+S SEFVEMFVG GA+RVRDLFK+AKE AP Sbjct: 207 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC 266 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 +IFIDE+DAVG RG NDER+QTLNQLLTEMDGF+ + +I++AATNRP LDSA Sbjct: 267 LIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSA 326 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R+V V PD GR++IL VH R L E+ D +A TPG GADLAN+ Sbjct: 327 LMRPGRFDRQVMVDAPDYSGRKEILEVHARNKKLA--PEVSIDSIARRTPGFSGADLANL 384 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 +NEAA+L ARR + +I DA++R Sbjct: 385 LNEAAILTARRRKSAITLLEIDDAVDR 411
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 251 bits (642), Expect = 9e-67 Identities = 128/207 (61%), Positives = 159/207 (76%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKA+AGEAG+PFFS+S SEFVEMFVG GA+RVRDLFK+AKE AP Sbjct: 246 GVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC 305 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 ++FIDE+DAVG RG + NDER+QTLNQLLTEMDGF+ + +IV+AATNRP LD A Sbjct: 306 LVFIDEIDAVGRQRGVGYGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVLDLA 365 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R+V V PD++GR ILA+H + L E+ ++ +A TPG GADLAN+ Sbjct: 366 LLRPGRFDRQVTVDYPDVQGRELILAIHAQNKKLHEEVQLAA--IARRTPGFTGADLANV 423 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 +NEAA+ ARR + + ++ DAI+R Sbjct: 424 LNEAAIFTARRRKEAITMAEVNDAIDR 450
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 249 bits (636), Expect = 5e-66 Identities = 135/209 (64%), Positives = 156/209 (74%), Gaps = 5/209 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKA AGEAG+PFF +S SEFVE+FVG GAARVRDLF++AK+ AP Sbjct: 209 GVLLVGPPGTGKTLLAKAAAGEAGVPFFIISGSEFVELFVGAGAARVRDLFEQAKKQAPC 268 Query: 183 IIFIDELDAVGGSRGRSF----NDERDQTLNQLLTEMDGFD-SDVKVIVMAATNRPKALD 347 I+FIDELDA+G SR NDER+QTLNQLLTEMDGF + VIV+AATNRP+ LD Sbjct: 269 IVFIDELDAIGKSRASGAFMGGNDEREQTLNQLLTEMDGFSAAGATVIVLAATNRPETLD 328 Query: 348 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 527 AL RPGRF R+V V PDL GR KIL ++ +K+ L D E+ +A TPG GADLA Sbjct: 329 PALLRPGRFDRQVLVDRPDLAGRLKILEIYAKKIKL--DKEVELKNIATRTPGFAGADLA 386 Query: 528 NIVNEAALLAARRGGDIVAREDIMDAIER 614 N+VNEAALLAAR D V D +AIER Sbjct: 387 NLVNEAALLAARNKQDSVTEADFREAIER 415
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 248 bits (632), Expect = 1e-65 Identities = 128/207 (61%), Positives = 158/207 (76%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKA+AGEA PFFS+S SEFVEMFVG GA+RVRDLFK+AKE AP Sbjct: 206 GVLLVGPPGTGKTLLAKAIAGEASAPFFSISGSEFVEMFVGVGASRVRDLFKKAKEKAPC 265 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+FIDE+DAVG RG NDER+QTLNQLLTEMDGF D VIV+AATNR LDSA Sbjct: 266 IVFIDEIDAVGRQRGVGIGGGNDEREQTLNQLLTEMDGFSGDTGVIVVAATNRIDVLDSA 325 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R++ V +P++ GR IL VH +K + +D ++ +++A TPG GADLAN+ Sbjct: 326 LLRPGRFDRQIMVSLPNINGRLAILKVHSKKKKIHKD--VLLEVIARRTPGFSGADLANL 383 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 +NEAA+L RRG + ++I D+I++ Sbjct: 384 LNEAAILTVRRGKVEITMKEIEDSIDK 410
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 247 bits (630), Expect = 2e-65 Identities = 132/207 (63%), Positives = 158/207 (76%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G LL GPPGTGKTLLA+AVAGEAG+PFFS +ASEFVE+FVG GA+RVRDLF++AK AP Sbjct: 297 GCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPC 356 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+FIDE+DAVG RG NDER+QT+NQLLTEMDGF + VIV+AATNRP LDSA Sbjct: 357 IVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSA 416 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R+V V PD+ GR KIL VH R L +D + D VA TPG GADL N+ Sbjct: 417 LLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDF--DKVARRTPGFTGADLQNL 474 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 +NEAA+LAARR +++++I DA+ER Sbjct: 475 MNEAAILAARRELKEISKDEISDALER 501
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 246 bits (627), Expect = 5e-65 Identities = 130/207 (62%), Positives = 156/207 (75%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKA+AGEAG+PFFS+S SEFVEMFVG GA+RVRDLFK+AK+ AP Sbjct: 208 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPC 267 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+FIDE+DAVG RG NDER+QTLNQLLTEMDGF+ + VIV+AATNR LDSA Sbjct: 268 IVFIDEIDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRADILDSA 327 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R+V V VPD GR IL VH + +E S++ + +A TPG GADLAN+ Sbjct: 328 LLRPGRFDRQVSVDVPDFRGRLAILEVHAKNKKME--SKVSLETIARRTPGFSGADLANL 385 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 +NEAA+L ARR + +I +I+R Sbjct: 386 LNEAAILTARRRKSAMTMSEIDTSIDR 412
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 246 bits (627), Expect = 5e-65 Identities = 130/207 (62%), Positives = 158/207 (76%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKA+AGEAG+PFFS+S SEFVEMFVG GA+RVRDLFK+AKE +P Sbjct: 208 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENSPC 267 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+FIDE+DAVG RG NDER+QTLNQLLTEMDGF+ + +I++AATNR LD+A Sbjct: 268 IVFIDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRVDVLDAA 327 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R+V V VPD++GR +IL VH R L D I +L+A TPG GADLAN+ Sbjct: 328 LLRPGRFDRQVTVDVPDVKGRLEILNVHARNKKL--DLSISLELIAKRTPGFSGADLANL 385 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 +NEAA+L ARR + +I +I+R Sbjct: 386 LNEAAILTARRRKKQITISEIDASIDR 412
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 245 bits (626), Expect = 7e-65 Identities = 130/214 (60%), Positives = 161/214 (75%), Gaps = 10/214 (4%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPGTGKTLLAKA+AGEA +PFF++S S+FVEMFVG GA+RVRD+F++AK+AAP Sbjct: 187 GVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPC 246 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DAVG RG +DER+QTLNQ+L EMDGF+ + +IV+AATNRP LD A Sbjct: 247 IIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPA 306 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R+V VG+PD+ GR +IL VH+R+VPL D I ++A TPG GADLAN+ Sbjct: 307 LLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPD--IDAAIIARGTPGFSGADLANL 364 Query: 534 VNEAALLAARRGGDIV-------AREDIMDAIER 614 VNEAAL AAR +V A++ IM ER Sbjct: 365 VNEAALFAARGNKRVVSMVEFEKAKDKIMMGAER 398
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 245 bits (626), Expect = 7e-65 Identities = 130/214 (60%), Positives = 161/214 (75%), Gaps = 10/214 (4%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPGTGKTLLAKA+AGEA +PFF++S S+FVEMFVG GA+RVRD+F++AK+AAP Sbjct: 187 GVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPC 246 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DAVG RG +DER+QTLNQ+L EMDGF+ + +IV+AATNRP LD A Sbjct: 247 IIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPA 306 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R+V VG+PD+ GR +IL VH+R+VPL D I ++A TPG GADLAN+ Sbjct: 307 LLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATD--IDAAIIARGTPGFSGADLANL 364 Query: 534 VNEAALLAARRGGDIV-------AREDIMDAIER 614 VNEAAL AAR +V A++ IM ER Sbjct: 365 VNEAALFAARGNKRVVSMVEFEKAKDKIMMGAER 398
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 245 bits (626), Expect = 7e-65 Identities = 130/214 (60%), Positives = 161/214 (75%), Gaps = 10/214 (4%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPGTGKTLLAKA+AGEA +PFF++S S+FVEMFVG GA+RVRD+F++AK+AAP Sbjct: 187 GVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPC 246 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DAVG RG +DER+QTLNQ+L EMDGF+ + +IV+AATNRP LD A Sbjct: 247 IIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPA 306 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R+V VG+PD+ GR +IL VH+R+VPL D I ++A TPG GADLAN+ Sbjct: 307 LLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATD--IDAAIIARGTPGFSGADLANL 364 Query: 534 VNEAALLAARRGGDIV-------AREDIMDAIER 614 VNEAAL AAR +V A++ IM ER Sbjct: 365 VNEAALFAARGNKRVVSMVEFEKAKDKIMMGAER 398
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 245 bits (626), Expect = 7e-65 Identities = 130/214 (60%), Positives = 161/214 (75%), Gaps = 10/214 (4%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPGTGKTLLAKA+AGEA +PFF++S S+FVEMFVG GA+RVRD+F++AK+AAP Sbjct: 187 GVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPC 246 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DAVG RG +DER+QTLNQ+L EMDGF+ + +IV+AATNRP LD A Sbjct: 247 IIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPA 306 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R+V VG+PD+ GR +IL VH+R+VPL D I ++A TPG GADLAN+ Sbjct: 307 LLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPD--IDAAIIARGTPGFSGADLANL 364 Query: 534 VNEAALLAARRGGDIV-------AREDIMDAIER 614 VNEAAL AAR +V A++ IM ER Sbjct: 365 VNEAALFAARGNKRVVSMVEFEKAKDKIMMGAER 398
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 245 bits (626), Expect = 7e-65 Identities = 130/214 (60%), Positives = 161/214 (75%), Gaps = 10/214 (4%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPGTGKTLLAKA+AGEA +PFF++S S+FVEMFVG GA+RVRD+F++AK+AAP Sbjct: 187 GVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPC 246 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DAVG RG +DER+QTLNQ+L EMDGF+ + +IV+AATNRP LD A Sbjct: 247 IIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPA 306 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R+V VG+PD+ GR +IL VH+R+VPL D I ++A TPG GADLAN+ Sbjct: 307 LLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPD--IDAAIIARGTPGFSGADLANL 364 Query: 534 VNEAALLAARRGGDIV-------AREDIMDAIER 614 VNEAAL AAR +V A++ IM ER Sbjct: 365 VNEAALFAARGNKRVVSMVEFEKAKDKIMMGAER 398
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 245 bits (625), Expect = 9e-65 Identities = 128/214 (59%), Positives = 162/214 (75%), Gaps = 10/214 (4%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+L+ GPPGTGKTLLAKA+AGEA +PFF++S S+FVEMFVG GA+RVRD+F+ A+++AP Sbjct: 187 GILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHARKSAPC 246 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DAVG RG +DER+QTLNQ+L EMDGFD + VI++AATNRP LD A Sbjct: 247 IIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGVILIAATNRPDVLDPA 306 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R+V V +PD+ GR++IL VH+RKVPL ED + + ++A TPG GADLAN+ Sbjct: 307 LLRPGRFDRQVIVALPDVRGRKQILKVHMRKVPLSEDVDPM--IIARGTPGFSGADLANL 364 Query: 534 VNEAALLAARRGGDIV-------AREDIMDAIER 614 VNEAAL AAR +V A++ IM ER Sbjct: 365 VNEAALFAARFNNRVVSMIHFEKAKDKIMMGSER 398
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 245 bits (625), Expect = 9e-65 Identities = 130/207 (62%), Positives = 158/207 (76%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G LL GPPGTGKTLLA+AVAGEAG+PFFS +ASEFVE+FVG GA+RVRDLF++AK AP Sbjct: 288 GCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPC 347 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+FIDE+DAVG RG NDER+QT+NQLLTEMDGF + VIV+AATNRP LDSA Sbjct: 348 IVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSA 407 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R+V V PD+ GR KIL VH R L +D + + +A TPG GADL N+ Sbjct: 408 LLRPGRFDRQVTVDRPDVAGRIKILQVHSRGKALTKDVDF--EKIARRTPGYTGADLQNL 465 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 +NEAA+LAARR +++++I DA+ER Sbjct: 466 MNEAAILAARRELKEISKDEISDALER 492
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 245 bits (625), Expect = 9e-65 Identities = 122/211 (57%), Positives = 159/211 (75%), Gaps = 3/211 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+L+ GPPGTGKTLLAKA+AGEA +PFF++S S+FVEMFVG GA+RVRD+F+ +++ AP Sbjct: 187 GILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKVAPC 246 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DAVG RG +DER+QTLNQ+L EMDGFD + +I++AATNRP LD A Sbjct: 247 IIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPA 306 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R++FV +PD+ GR KI+ VH++KVPL + + + ++A TPG GADLAN+ Sbjct: 307 LLRPGRFDRQIFVALPDIRGREKIIQVHMKKVPLGNNVDPM--IIARGTPGFSGADLANL 364 Query: 534 VNEAALLAARRGGDIVAREDIMDAIEREKYG 626 VNEAAL AAR D+V D A ++ G Sbjct: 365 VNEAALFAARNNRDVVMMSDFESAKDKITMG 395
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 244 bits (624), Expect = 1e-64 Identities = 132/212 (62%), Positives = 156/212 (73%), Gaps = 4/212 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKAVAGEAG+PF+S+S S+FVEMFVG GA+RVRDLF+ AK+ APS Sbjct: 228 GVLLEGPPGTGKTLLAKAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFENAKKTAPS 287 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSD-VKVIVMAATNRPKALDS 350 IIFIDE+DAVG RG NDER+QTLNQLL EMDGF D VIV+AATNR LD Sbjct: 288 IIFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLVEMDGFQDDGNSVIVIAATNRSDVLDP 347 Query: 351 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 530 AL RPGRF RKV VG PD++GR +L VH + PL D ++ VA TPG VGADL N Sbjct: 348 ALLRPGRFDRKVLVGAPDVKGREAVLKVHAKNKPLASDVDL--HNVATQTPGYVGADLEN 405 Query: 531 IVNEAALLAARRGGDIVAREDIMDAIEREKYG 626 ++NEAAL+AAR+ + DI + ++R G Sbjct: 406 VLNEAALVAARQNKKEINAADIDEGMDRAMAG 437
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 244 bits (623), Expect = 2e-64 Identities = 130/207 (62%), Positives = 156/207 (75%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G LL GPPGTGKTLLA+AVAGEAG PFFS +ASEFVE+FVG GA+RVRDLF++AK AP Sbjct: 288 GCLLVGPPGTGKTLLARAVAGEAGTPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPC 347 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+FIDE+DAVG RG NDER+QT+NQLLTEMDGF + VIV+AATNRP LDSA Sbjct: 348 IVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSA 407 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R+V V PD+ GR KIL VH R L +D + D +A TPG G DL N+ Sbjct: 408 LLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDF--DKIARRTPGFTGVDLQNL 465 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 +NEAA+LAARR +++++I DA+ER Sbjct: 466 MNEAAILAARRDLKEISKDEIADALER 492
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 243 bits (619), Expect = 4e-64 Identities = 129/207 (62%), Positives = 158/207 (76%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G LL GPPGTGKTLLA+AVAGEAG+PFFS +ASEFVE+FVG GA+RVRDLF++AK AP Sbjct: 285 GCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPC 344 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+FIDE+DAVG RG NDER+QT+NQLLTEMDGF + VIV+AATNRP LDSA Sbjct: 345 IVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSA 404 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R+V V PD+ GR +IL VH R + +D + + VA TPG GADL N+ Sbjct: 405 LLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDY--EKVARRTPGFTGADLQNL 462 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 +NEAA+LAARR +++++I DA+ER Sbjct: 463 MNEAAILAARRELKEISKDEISDALER 489
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 242 bits (618), Expect = 6e-64 Identities = 129/210 (61%), Positives = 155/210 (73%), Gaps = 2/210 (0%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLA+AVAGEA +PFF +S S+F+EMFVG GA+RVRDLFK+A+E AP Sbjct: 176 GVLLVGPPGTGKTLLARAVAGEASVPFFRISGSDFIEMFVGIGASRVRDLFKQAREKAPG 235 Query: 183 IIFIDELDAVGGSRGRSF--NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 356 IIFIDELDA+G SR + NDER+QTLNQLL EMDGFD+ +I++AATNRP LD AL Sbjct: 236 IIFIDELDAIGKSRLNAIHSNDEREQTLNQLLVEMDGFDNTTGLILLAATNRPDVLDPAL 295 Query: 357 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 536 RPGRF R+V V PDL+GR IL +H + V L E+ VA +T G GADLAN+V Sbjct: 296 LRPGRFDRQVCVDRPDLKGREAILRIHAQNVKLA--PEVDLKAVARITGGYSGADLANVV 353 Query: 537 NEAALLAARRGGDIVAREDIMDAIEREKYG 626 NEAALLA R G V D+ +A+E+ G Sbjct: 354 NEAALLAVRSGRAQVIETDLDEAVEKTMIG 383
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 242 bits (617), Expect = 7e-64 Identities = 128/207 (61%), Positives = 156/207 (75%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G LL GPPGTGKTLLA+AVAGEAG+PFFS +ASEFVE+FVG GA+RVR LF+ AK AP Sbjct: 265 GCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENAKSKAPC 324 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+FIDE+DAVG RG NDER+QT+NQLLTEMDGF + VIV+AATNRP LDSA Sbjct: 325 IVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSA 384 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPG+F R+V V PD+ GR +IL VH R L +D + D +A TPG GADL N+ Sbjct: 385 LLRPGKFDRQVTVDRPDVAGRVRILQVHSRGKALAKDVDF--DKIARRTPGFTGADLQNL 442 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 +NEAA+LAARR +++++I DA+ER Sbjct: 443 MNEAAILAARRDLKEISKDEISDALER 469
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 241 bits (615), Expect = 1e-63 Identities = 128/212 (60%), Positives = 158/212 (74%), Gaps = 4/212 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL G PG GKTLLAKA+AGEA +PF SVS S+FVEMFVG GAARVRDLF+ AK+ AP Sbjct: 190 GVLLYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETAKKHAPC 249 Query: 183 IIFIDELDAVGGSRGR----SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 350 IIFIDE+DAVG +RG +DER+QTLNQLL EMDGFD+ +IV+AATNRP LD Sbjct: 250 IIFIDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDGFDTSDGIIVIAATNRPDILDP 309 Query: 351 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 530 AL RPGRF R++F+ PD+ GR +IL VH R L +D ++ + VA TPG GADL N Sbjct: 310 ALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDL--EFVARATPGFTGADLEN 367 Query: 531 IVNEAALLAARRGGDIVAREDIMDAIEREKYG 626 ++NEAALLAAR+G + + E+I +A++R G Sbjct: 368 LLNEAALLAARKGKEEITMEEIEEALDRITMG 399
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 240 bits (613), Expect = 2e-63 Identities = 122/211 (57%), Positives = 160/211 (75%), Gaps = 3/211 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+L+ GPPGTGKTLLAKA+AGEA +PFF++S S+FVEMFVG GA+RVRD+F+ ++++AP Sbjct: 187 GILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKSAPC 246 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DAVG RG +DER+QTLNQ+L EMDGFD + +I++AATNRP LD A Sbjct: 247 IIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPA 306 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R+V V +PD+ GR +IL VH+RKVPL +D + + ++A TPG GADLAN+ Sbjct: 307 LLRPGRFDRQVIVALPDIRGREQILKVHMRKVPLSKDVDPM--IIARGTPGFSGADLANL 364 Query: 534 VNEAALLAARRGGDIVAREDIMDAIEREKYG 626 VNEAAL AAR +V+ + A ++ G Sbjct: 365 VNEAALFAARLDKRVVSMLEFERAKDKMMMG 395
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 240 bits (612), Expect = 3e-63 Identities = 126/207 (60%), Positives = 156/207 (75%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKA+AGEA +PFFS+S SEFVEMFVG GA+RVRDLFK+AK+ AP Sbjct: 189 GVLLVGPPGTGKTLLAKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKQNAPC 248 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 ++FIDE+DAVG RG NDER+QTLNQLLTEMDGF+ + VIV+AATNR LD+A Sbjct: 249 LVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRVDVLDAA 308 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R++ V +PD++ R IL VH + L ++ + VA T G GADLAN+ Sbjct: 309 LLRPGRFDRQIMVSMPDVKSRIAILKVHANQKKLH--PQVSLEAVARRTAGFAGADLANL 366 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 +NEAA+LA RRG + ++I DAI+R Sbjct: 367 LNEAAILAVRRGLKQITWKEIDDAIDR 393
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 239 bits (611), Expect = 4e-63 Identities = 130/209 (62%), Positives = 156/209 (74%), Gaps = 5/209 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKAVAGEA +PFFS+ S F+EMFVG GA+RVRDLF AK+ APS Sbjct: 211 GVLLVGPPGTGKTLLAKAVAGEASVPFFSMGGSSFIEMFVGLGASRVRDLFDIAKKEAPS 270 Query: 183 IIFIDELDAVGGSRGR----SFNDERDQTLNQLLTEMDGFDSD-VKVIVMAATNRPKALD 347 IIFIDE+DA+G SR S NDER+QTLNQLL EMDGF S+ VIV+AATNRP+ LD Sbjct: 271 IIFIDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILD 330 Query: 348 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 527 AL RPGRF R+V V PD +GR +IL VH++ V L D ++ +A +T GL GADLA Sbjct: 331 PALLRPGRFDRQVLVDKPDFKGRVEILKVHIKPVKLANDVDL--QEIAKLTAGLAGADLA 388 Query: 528 NIVNEAALLAARRGGDIVAREDIMDAIER 614 NI+NEAALLA R V ++ + +A+ER Sbjct: 389 NIINEAALLAGRNNQKEVKQQHLKEAVER 417
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 239 bits (610), Expect = 5e-63 Identities = 131/209 (62%), Positives = 155/209 (74%), Gaps = 5/209 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKAVAGEA +PFFS+ S F+EMFVG GA+RVRDLF+ AK+ APS Sbjct: 205 GVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPS 264 Query: 183 IIFIDELDAVGGSRGR----SFNDERDQTLNQLLTEMDGFDSD-VKVIVMAATNRPKALD 347 IIFIDE+DA+G SR S NDER+QTLNQLL EMDGF S+ VIV+AATNRP+ LD Sbjct: 265 IIFIDEIDAIGKSRAAGGVVSGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILD 324 Query: 348 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 527 AL RPGRF R+V V PD GR +IL VH++ V L D + VA +T GL GADLA Sbjct: 325 PALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNL--QEVAKLTAGLAGADLA 382 Query: 528 NIVNEAALLAARRGGDIVAREDIMDAIER 614 NI+NEAALLA R V ++ + +A+ER Sbjct: 383 NIINEAALLAGRNNQKEVRQQHLKEAVER 411
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 239 bits (610), Expect = 5e-63 Identities = 131/209 (62%), Positives = 155/209 (74%), Gaps = 5/209 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKAVAGEA +PFFS+ S F+EMFVG GA+RVRDLF+ AK+ APS Sbjct: 205 GVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPS 264 Query: 183 IIFIDELDAVGGSRGR----SFNDERDQTLNQLLTEMDGFDSD-VKVIVMAATNRPKALD 347 IIFIDE+DA+G SR S NDER+QTLNQLL EMDGF S+ VIV+AATNRP+ LD Sbjct: 265 IIFIDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILD 324 Query: 348 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 527 AL RPGRF R+V V PD GR +IL VH++ V L D + VA +T GL GADLA Sbjct: 325 PALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNL--QEVAKLTAGLAGADLA 382 Query: 528 NIVNEAALLAARRGGDIVAREDIMDAIER 614 NI+NEAALLA R V ++ + +A+ER Sbjct: 383 NIINEAALLAGRNNQKEVKQQHLKEAVER 411
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 238 bits (607), Expect = 1e-62 Identities = 122/207 (58%), Positives = 156/207 (75%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLA+AVAGEAG+PFF++S S+FVEMFVG GA+RVRDLF++AK+ +P Sbjct: 198 GVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPC 257 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIF+DE+DAVG RG +DER+QTLNQLL EMDGF VI++AATNRP LD A Sbjct: 258 IIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPA 317 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R++ V PDL GRR +L VH + P+ D+++ D +A T G+ GADLAN+ Sbjct: 318 LLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADL--DGLAKRTVGMTGADLANV 375 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 +NEAALL AR G ++ + +A++R Sbjct: 376 INEAALLTARENGTVITGPALEEAVDR 402
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 238 bits (607), Expect = 1e-62 Identities = 122/207 (58%), Positives = 156/207 (75%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLA+AVAGEAG+PFF++S S+FVEMFVG GA+RVRDLF++AK+ +P Sbjct: 198 GVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPC 257 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIF+DE+DAVG RG +DER+QTLNQLL EMDGF VI++AATNRP LD A Sbjct: 258 IIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPA 317 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R++ V PDL GRR +L VH + P+ D+++ D +A T G+ GADLAN+ Sbjct: 318 LLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADL--DGLAKRTVGMTGADLANV 375 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 +NEAALL AR G ++ + +A++R Sbjct: 376 INEAALLTARENGTVITGPALEEAVDR 402
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 238 bits (606), Expect = 1e-62 Identities = 123/207 (59%), Positives = 156/207 (75%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLA+AVAGEAG+PFF++S S+FVEMFVG GA+RVRDLF +AK+ +P Sbjct: 198 GVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFDQAKQNSPC 257 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIF+DE+DAVG RG +DER+QTLNQLL EMDGF VI++AATNRP LD A Sbjct: 258 IIFVDEIDAVGRQRGTGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPA 317 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R++ V PDL GRR +L VH + P+ +D+++ D +A T G+ GADLAN+ Sbjct: 318 LLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPIADDADL--DGLAKRTVGMTGADLANV 375 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 VNEAALL AR G ++ + +A++R Sbjct: 376 VNEAALLTARENGLVITGPALEEAVDR 402
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 237 bits (605), Expect = 2e-62 Identities = 122/211 (57%), Positives = 158/211 (74%), Gaps = 3/211 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G LL GPPGTGKTLLAKA+AGEA +PFFS+S S+FVEMFVG GA+RVRD+F++ K AP Sbjct: 190 GCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPC 249 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DAVG RG NDER+QTLNQ+L EMDGF+++ V+++AATNRP LD A Sbjct: 250 IIFIDEIDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRA 309 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R++ V PD+ GR +IL VHL+K+ + +S ++ ++A TPG GA+LAN+ Sbjct: 310 LLRPGRFDRQIAVANPDINGREQILKVHLKKI--KYNSTVLARIIARGTPGFSGAELANL 367 Query: 534 VNEAALLAARRGGDIVAREDIMDAIEREKYG 626 VNEAAL+AAR G V D+ +A ++ G Sbjct: 368 VNEAALIAARLGKKEVDMHDMEEAKDKVLMG 398
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 237 bits (605), Expect = 2e-62 Identities = 122/211 (57%), Positives = 158/211 (74%), Gaps = 3/211 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G LL GPPGTGKTLLAKA+AGEA +PFFS+S S+FVEMFVG GA+RVRD+F++ K AP Sbjct: 190 GCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPC 249 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DAVG RG NDER+QTLNQ+L EMDGF+++ V+++AATNRP LD A Sbjct: 250 IIFIDEIDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRA 309 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R++ V PD+ GR +IL VHL+K+ + +S ++ ++A TPG GA+LAN+ Sbjct: 310 LLRPGRFDRQIAVANPDINGREQILKVHLKKI--KYNSTVLARIIARGTPGFSGAELANL 367 Query: 534 VNEAALLAARRGGDIVAREDIMDAIEREKYG 626 VNEAAL+AAR G V D+ +A ++ G Sbjct: 368 VNEAALIAARLGKKEVDMHDMEEAKDKVLMG 398
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 237 bits (604), Expect = 2e-62 Identities = 126/207 (60%), Positives = 152/207 (73%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKTLLAKA+A EA +PFFSV+ SEFVEMF+G GAARVRDLFK+A E AP Sbjct: 221 GILLVGPPGTGKTLLAKAIANEADVPFFSVAGSEFVEMFIGIGAARVRDLFKKASENAPC 280 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+FIDE+DAVG RG NDER+QTLNQLLTEMDGF + VIV+ ATNR LD+A Sbjct: 281 IVFIDEIDAVGRERGAGVGGGNDEREQTLNQLLTEMDGFKENKGVIVVGATNRADILDAA 340 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R+V V +PD GR IL VH R PL ED ++ +AN TPG GADLAN+ Sbjct: 341 LLRPGRFDRQVTVNLPDRLGRVGILKVHARNKPLGEDVSLV--QLANRTPGFSGADLANL 398 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 +NEAA+LA R + + ++ +A +R Sbjct: 399 LNEAAILATRYKKSSITKNEVNEAADR 425
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 234 bits (598), Expect = 1e-61 Identities = 119/190 (62%), Positives = 151/190 (79%), Gaps = 3/190 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+L+ GPPGTGKTLLA+A+AGEA +PFF++S S+FVEMFVG GA+RVRD+F++AK+ AP Sbjct: 186 GILMVGPPGTGKTLLARAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPC 245 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 +IFIDE+DAVG RG +DER+QTLNQ+L EMDGF + VIV+AATNRP LD A Sbjct: 246 LIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPA 305 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R+V VG+PD++GR +IL VH+RKV + +D + + +A TPG GADLAN+ Sbjct: 306 LTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAM--TLARGTPGYSGADLANL 363 Query: 534 VNEAALLAAR 563 VNEAAL AAR Sbjct: 364 VNEAALFAAR 373
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 234 bits (597), Expect = 2e-61 Identities = 123/207 (59%), Positives = 153/207 (73%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLA+AVAGEAG+PFFS+S S+FVEMFVG GA+RVRDLF+ AK+ AP Sbjct: 201 GVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPC 260 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DAVG RG +DER+QTLNQLL EMDGF ++ +I++AATNR LD A Sbjct: 261 IIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPA 320 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R++ V PD+ GR ++L VH R PL +D + +A TPG GADL N+ Sbjct: 321 LLRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNL--KTIATRTPGFSGADLENL 378 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 +NEAAL+AAR ++ I +AI+R Sbjct: 379 LNEAALVAARHDHTKISMIHIEEAIDR 405
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 231 bits (590), Expect = 1e-60 Identities = 122/208 (58%), Positives = 149/208 (71%), Gaps = 4/208 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G +L+GPPGTGKTLLAKA AGEAG+PF+ VS SEFVEMFVG GAARVRDLFK A+E APS Sbjct: 383 GAILSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPS 442 Query: 183 IIFIDELDAVGGSRGRS----FNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 350 I+FIDE+DA+G +R + NDER+ TLNQ+L EMDGF V+V+A TNRP LD Sbjct: 443 IVFIDEIDAIGKARQKGNFSGANDERENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDK 502 Query: 351 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 530 AL RPGRF R + + P+LEGR+ I AVHL + L + + + +A +TPG GAD+AN Sbjct: 503 ALLRPGRFDRHINIDKPELEGRKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIAN 562 Query: 531 IVNEAALLAARRGGDIVAREDIMDAIER 614 + NEAAL+AAR D V AIER Sbjct: 563 VCNEAALIAARSDEDAVKLNHFEQAIER 590
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 230 bits (586), Expect = 3e-60 Identities = 122/207 (58%), Positives = 151/207 (72%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKA AGEAG+PFFS+S S+FVEMFVG GA+RVRDLF+ AK+ AP Sbjct: 196 GVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPC 255 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 +IFIDE+DAVG RG +DER+QTLNQLL EMDGF ++ +I++AATNR LD A Sbjct: 256 LIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPA 315 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R++ V PD+ GR +L VH R PL+E + +A TPG GADL N+ Sbjct: 316 LLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNL--KSIAMRTPGFSGADLENL 373 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 +NEAAL+AAR+ + DI +A +R Sbjct: 374 LNEAALVAARQNKKKIDARDIDEATDR 400
>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein| AFG3 (EC 3.4.24.-) (TAT-binding homolog 10) Length = 761 Score = 229 bits (583), Expect = 7e-60 Identities = 119/213 (55%), Positives = 150/213 (70%), Gaps = 9/213 (4%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G +L+GPPGTGKTLLAKA AGEA +PF SVS SEFVEMFVG GA+RVRDLF +A+ APS Sbjct: 323 GAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPS 382 Query: 183 IIFIDELDAVGGSRGR-----SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 347 IIFIDE+DA+G RG+ NDER+ TLNQLL EMDGF + +V+V+A TNRP LD Sbjct: 383 IIFIDEIDAIGKERGKGGALGGANDEREATLNQLLVEMDGFTTSDQVVVLAGTNRPDVLD 442 Query: 348 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLE----EDSEIICDLVANVTPGLVG 515 +AL RPGRF R + + PD+ GR++I VHL+++ L+ +D + +A +TPG G Sbjct: 443 NALMRPGRFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTG 502 Query: 516 ADLANIVNEAALLAARRGGDIVAREDIMDAIER 614 AD+AN NEAAL+AAR + AIER Sbjct: 503 ADIANACNEAALIAARHNDPYITIHHFEQAIER 535
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 226 bits (577), Expect = 3e-59 Identities = 116/209 (55%), Positives = 150/209 (71%), Gaps = 5/209 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G +L GPPGTGKTLLAKA AGEA +PF +VS SEF+EMFVG G ARVRDLF A++ AP Sbjct: 343 GAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPC 402 Query: 183 IIFIDELDAVGGSRGR---SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+FIDE+DAVG RGR E++ TLNQLL EMDGF++ V+++A TNRP LD A Sbjct: 403 ILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPA 462 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE--DSEIICDLVANVTPGLVGADLA 527 L RPGRF R++F+G PD++GR I VHLR + L+ + + + +A++TPG GAD+A Sbjct: 463 LLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVA 522 Query: 528 NIVNEAALLAARRGGDIVAREDIMDAIER 614 N+ NEAAL+AAR D + ++ AIER Sbjct: 523 NVCNEAALIAARHLSDSINQKHFEQAIER 551
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 226 bits (577), Expect = 3e-59 Identities = 116/209 (55%), Positives = 149/209 (71%), Gaps = 5/209 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G +L GPPGTGKTLLAKA AGEA +PF +VS SEF+EMFVG G ARVRDLF A++ AP Sbjct: 342 GAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPC 401 Query: 183 IIFIDELDAVGGSRGR---SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+FIDE+DAVG RGR E++ TLNQLL EMDGF++ V+++A TNRP LD A Sbjct: 402 ILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPA 461 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE--DSEIICDLVANVTPGLVGADLA 527 L RPGRF R++F+G PD++GR I VHLR + L+ + + + +A++TPG GAD+A Sbjct: 462 LLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVA 521 Query: 528 NIVNEAALLAARRGGDIVAREDIMDAIER 614 N+ NEAAL+AAR D + + AIER Sbjct: 522 NVCNEAALIAARHLSDAINEKHFEQAIER 550
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 225 bits (574), Expect = 7e-59 Identities = 117/211 (55%), Positives = 151/211 (71%), Gaps = 3/211 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKTLLAKA AGEA +PFF +SAS FVE++VG GA RVR++FKEA++ AP+ Sbjct: 247 GILLGGPPGTGKTLLAKATAGEANVPFFFISASSFVELYVGLGAKRVREMFKEARKLAPA 306 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDELDAVG SRG NDER+QTLNQ+L EMDG + + +++M ATNR LD A Sbjct: 307 IIFIDELDAVGRSRGSGIGGGNDEREQTLNQILVEMDGINENAGILIMGATNRTDVLDPA 366 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R + VG+PD++ R +IL +H + L + EI D +A TPG GA L N+ Sbjct: 367 LLRPGRFDRIITVGLPDIKEREEILKLHSKGKRLSK--EIKFDKIAKRTPGYSGAQLENV 424 Query: 534 VNEAALLAARRGGDIVAREDIMDAIEREKYG 626 +NEA+LL+ R D++ I +AI+R G Sbjct: 425 INEASLLSVREKTDVIISTQIDEAIDRVMAG 455
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 221 bits (562), Expect = 2e-57 Identities = 115/211 (54%), Positives = 146/211 (69%), Gaps = 7/211 (3%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G +L GPPGTGKTLLAKA AGEA +PF +V+ SEF+EMFVG G ARVRD+F A++ AP Sbjct: 209 GAMLTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPC 268 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+FIDE+DA+G RGR E++ TLNQ+L EMDGF+S V+V+A TNRP LD A Sbjct: 269 ILFIDEIDAIGRKRGRGHLGGQSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPA 328 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDL----VANVTPGLVGAD 521 L RPGRF R++++G PD++GR I VHLR PL+ D + D +A +TPG GAD Sbjct: 329 LTRPGRFDRQIYIGPPDIKGRSSIFKVHLR--PLKLDGSLSKDALSRKLAALTPGFTGAD 386 Query: 522 LANIVNEAALLAARRGGDIVAREDIMDAIER 614 ++N+ NEAAL+AAR V AIER Sbjct: 387 ISNVCNEAALIAARHLSPSVQERHFEQAIER 417
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 209 bits (531), Expect = 7e-54 Identities = 118/207 (57%), Positives = 140/207 (67%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GV+L GPPGTGKTLLAKAVAGEAG+PFF + S F +M VG GA RVRDLF +AK+AAP Sbjct: 263 GVILYGPPGTGKTLLAKAVAGEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPC 322 Query: 183 IIFIDELDAVGGSRGR---SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+D+VG RGR S +QTLNQLL EMDGF S V+VMAATNR LD A Sbjct: 323 IIFIDEIDSVGSKRGRVELSSYSVVEQTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDA 382 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R + + +PD++ R IL VH + L S+I VA TPG GA L N+ Sbjct: 383 LLRPGRFDRHIQINLPDIKEREGILQVHAKNKNL--SSKISLLDVAKRTPGFSGAQLENV 440 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 +NEA LLA R + DI +AI+R Sbjct: 441 INEATLLAVRDNRTTINMNDIDEAIDR 467
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 207 bits (527), Expect = 2e-53 Identities = 118/207 (57%), Positives = 139/207 (67%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GV+L GPPGTGKTLLAKAVAGEAG+PFF + S F +M VG GA RVRDLF +AK+AAP Sbjct: 266 GVILYGPPGTGKTLLAKAVAGEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPC 325 Query: 183 IIFIDELDAVGGSRGR---SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+D+VG RGR S +QTLNQLL EMDGF S V+VMAATNR LD A Sbjct: 326 IIFIDEIDSVGSKRGRVELSSYSVVEQTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDA 385 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R + + +PD++ R IL VH L S+I VA TPG GA L N+ Sbjct: 386 LLRPGRFDRHIQINLPDIKEREGILKVHAENKNL--SSKISLLDVAKRTPGFSGAQLENV 443 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 +NEA LLA R + DI +AI+R Sbjct: 444 INEATLLAVRDNRTTININDIDEAIDR 470
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 203 bits (517), Expect = 3e-52 Identities = 109/212 (51%), Positives = 145/212 (68%), Gaps = 7/212 (3%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLA+A AGEAG+ FF +S SEF E++VG GA R+RDLF +A+ AP+ Sbjct: 316 GVLLTGPPGTGKTLLARATAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPA 375 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 IIFIDELDA+GG R QTLNQLL E+DGF +I++ ATN P+ALD AL R Sbjct: 376 IIFIDELDAIGGKRNPKDQAYAKQTLNQLLVELDGFSQTSGIIIIGATNFPEALDKALTR 435 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 PGRF + V V +PD+ GR IL H++K+ L ++ + ++A TPGL GA+LAN+VN+ Sbjct: 436 PGRFDKVVNVDLPDVRGRADILKHHMKKITLADN--VDPTIIARGTPGLSGAELANLVNQ 493 Query: 543 AALLAARRGGDIV-------AREDIMDAIERE 617 AA+ A ++ V A++ I+ ER+ Sbjct: 494 AAVYACQKNAVSVDMSHFEWAKDKILMGAERK 525
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 202 bits (514), Expect = 7e-52 Identities = 111/208 (53%), Positives = 137/208 (65%), Gaps = 4/208 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G LL GPPG GKTLLAKAVA EA +PF +++ EFVE+ G GAARVR LFKEA+ AP Sbjct: 344 GALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPC 403 Query: 183 IIFIDELDAVGGSRGRSF----NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 350 I++IDE+DAVG R + N E +QTLNQLL EMDG + VIV+A+TNR LD Sbjct: 404 IVYIDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDG 463 Query: 351 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 530 AL RPGR R VF+ +P L+ RR+I HL+ + L + S +A +TPG GAD+AN Sbjct: 464 ALMRPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIAN 523 Query: 531 IVNEAALLAARRGGDIVAREDIMDAIER 614 I NEAAL AAR G V + A+ER Sbjct: 524 ICNEAALHAAREGHTSVHTLNFEYAVER 551
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 201 bits (510), Expect = 2e-51 Identities = 108/199 (54%), Positives = 143/199 (71%), Gaps = 1/199 (0%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKTLLA+AVAGEA +PF+ S SEF EMFVG GA+R+R+LF+EAK AP Sbjct: 316 GILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPC 375 Query: 183 IIFIDELDAVGGSRGRS-FNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 359 +IFIDELD+VGG R S + QT+NQLL EMDGF + VI++ ATN P+ALD+AL Sbjct: 376 VIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALI 435 Query: 360 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 539 RPGRF +V V PD++GR +IL +L K+ D + +++A T G GA+L N+VN Sbjct: 436 RPGRFDMQVTVPRPDVKGRTEILKWYLNKIKF--DKSVDPEIIARGTVGFSGAELENLVN 493 Query: 540 EAALLAARRGGDIVAREDI 596 +AAL AA G ++V +++ Sbjct: 494 QAALKAAVDGKEMVTMKEL 512
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 201 bits (510), Expect = 2e-51 Identities = 108/199 (54%), Positives = 143/199 (71%), Gaps = 1/199 (0%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKTLLA+AVAGEA +PF+ S SEF EMFVG GA+R+R+LF+EAK AP Sbjct: 374 GILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPC 433 Query: 183 IIFIDELDAVGGSRGRS-FNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 359 +IFIDELD+VGG R S + QT+NQLL EMDGF + VI++ ATN P+ALD+AL Sbjct: 434 VIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALI 493 Query: 360 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 539 RPGRF +V V PD++GR +IL +L K+ D + +++A T G GA+L N+VN Sbjct: 494 RPGRFDMQVTVPRPDVKGRTEILKWYLNKIKF--DQSVDPEIIARGTVGFSGAELENLVN 551 Query: 540 EAALLAARRGGDIVAREDI 596 +AAL AA G ++V +++ Sbjct: 552 QAALKAAVDGKEMVTMKEL 570
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 195 bits (496), Expect = 8e-50 Identities = 106/199 (53%), Positives = 141/199 (70%), Gaps = 1/199 (0%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKTLLA+AVAGEA +PF+ S SEF EMFVG GA+R+R+LF+EAK AP Sbjct: 316 GILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPC 375 Query: 183 IIFIDELDAVGGSRGR-SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 359 +IFIDELD+VGG R + QT+ QLL EMDGF + VI++ ATN P+ALD+AL Sbjct: 376 VIFIDELDSVGGKRIEFPMHPYSRQTIIQLLAEMDGFKPNEGVIIIGATNFPEALDNALI 435 Query: 360 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 539 RPGRF +V V PD++GR +IL +L K+ D + +++A T G GA+L N+VN Sbjct: 436 RPGRFDMQVTVPRPDVKGRTEILKWYLNKIKF--DKSVDPEIIARGTVGFSGAELENLVN 493 Query: 540 EAALLAARRGGDIVAREDI 596 +AAL AA G ++V +++ Sbjct: 494 QAALKAAVDGKEMVTMKEL 512
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 192 bits (488), Expect = 7e-49 Identities = 100/188 (53%), Positives = 131/188 (69%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKAVA EAG F+ ++ E + +VG +R +F+EA+E APS Sbjct: 215 GVLLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPS 274 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 IIFIDE+DA+ R + + + + QLLT MDG +V+V+ ATNRP ALD AL R Sbjct: 275 IIFIDEIDAIAPKRDEATGEVERRLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRR 334 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 PGRF R++ +GVPD EGR++IL +H R +PL ED ++ D +A+VT G VGADLA + E Sbjct: 335 PGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDL--DYLADVTHGFVGADLAALCKE 392 Query: 543 AALLAARR 566 AA+ A RR Sbjct: 393 AAMRALRR 400 Score = 170 bits (431), Expect = 3e-42 Identities = 90/188 (47%), Positives = 120/188 (63%), Gaps = 1/188 (0%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKAVA E+G F SV E +VG +R++F++A+++AP Sbjct: 488 GVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPC 547 Query: 183 IIFIDELDAVGGSRGRSFNDE-RDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 359 IIF DE+DA+ RGR + D+ +NQLLTE+DG + V+V+AATNRP +D AL Sbjct: 548 IIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALL 607 Query: 360 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 539 RPGR R + V VPD + R I +H R + L ED + + +A T G GAD+ + Sbjct: 608 RPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNL--EELAKKTEGYTGADIEALCR 665 Query: 540 EAALLAAR 563 EAA+LA R Sbjct: 666 EAAMLAVR 673
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 188 bits (477), Expect = 1e-47 Identities = 105/207 (50%), Positives = 135/207 (65%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKAVA A F ++A E V+ F+G GA VR+LF+ A+E APS Sbjct: 215 GVLLYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPS 274 Query: 183 IIFIDELDAVGGSRGR---SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DA+G R R S + E +TL QLL EMDGFD + V+AATNR LD A Sbjct: 275 IIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPA 334 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R + + +PD EGR +I +H R + L ED ++ +A +T G GAD+ I Sbjct: 335 LLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDL--QKLAKITEGASGADIKAI 392 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA ++A R DIV +D + A++R Sbjct: 393 CTEAGMMAIREDRDIVTMDDFLKAVDR 419
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 186 bits (473), Expect = 4e-47 Identities = 105/207 (50%), Positives = 139/207 (67%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKT+LAKAVA E+ F V ASEF + FVG GA VR+LF+ AK APS Sbjct: 170 GVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPS 229 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DA+G R G S E +TL QLL E+DGFD V ++AATNR LD A Sbjct: 230 IIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDPA 289 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R + V +PD +GR +I ++L+K+ +E++ I +L++ +T G GAD+ N+ Sbjct: 290 LLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDN--INLELLSQLTEGFSGADIKNV 347 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EAA +A R G + V D+++AI + Sbjct: 348 CVEAAYMAIRDGRNKVTMNDLVEAINK 374
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 186 bits (473), Expect = 4e-47 Identities = 106/207 (51%), Positives = 135/207 (65%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKAVA E F + ASEFV ++G GA VR +F+ AKE +PS Sbjct: 187 GVLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPS 246 Query: 183 IIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DAV R +S E +TL QLL E+DGF+S V ++AATNRP LD A Sbjct: 247 IIFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPA 306 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R + V +P+ +GRR+IL +H + L E+ +I +L+A +T G GADL I Sbjct: 307 LLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDI--ELLARITDGASGADLKAI 364 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R D V D MDA+++ Sbjct: 365 CTEAGMFAIRDERDEVTMADFMDAVDK 391
>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)| Length = 662 Score = 186 bits (472), Expect = 5e-47 Identities = 102/205 (49%), Positives = 137/205 (66%), Gaps = 1/205 (0%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPG GKTLLAKAV+GEA +PF S S F E+ VG GA+R+R LF AK+ +P Sbjct: 201 GVLLVGPPGVGKTLLAKAVSGEAQVPFLYASGSSFDEVLVGLGASRIRQLFTTAKQNSPC 260 Query: 183 IIFIDELDAVGGSRGRS-FNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 359 ++FIDE+D+VGG+R S + +QT+NQLL EMDGF S +IV+ ATN+ + LD AL Sbjct: 261 LVFIDEIDSVGGNRTFSPHHPFANQTINQLLAEMDGFQSKEGIIVLGATNQAEVLDKALL 320 Query: 360 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 539 RPGRF ++ V P EGR +L ++L+KV + S I + +A+ T G GAD+ N+VN Sbjct: 321 RPGRFDVQIHVSPPTYEGRIALLNLYLKKV--KTGSNIDIEKLAHGTVGYTGADIQNLVN 378 Query: 540 EAALLAARRGGDIVAREDIMDAIER 614 +AA+ AA R V + DA +R Sbjct: 379 QAAIAAALRNDPFVEMHHLWDARDR 403
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 184 bits (468), Expect = 1e-46 Identities = 102/209 (48%), Positives = 135/209 (64%), Gaps = 3/209 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKAVAGE F V SE V F+G GA VR++F+ A+E APS Sbjct: 175 GVLLHGPPGTGKTLLAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPS 234 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+FIDE+DA+ R G S + E +T+ QLL E+DGFD V V+AATNR +D A Sbjct: 235 ILFIDEIDAIASKRVDIGTSGDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPA 294 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 + RPGRF R + V +P L GR +IL +H RK + D ++ + +A +T G GADL + Sbjct: 295 VLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDL--EAIAKLTEGFSGADLKAV 352 Query: 534 VNEAALLAARRGGDIVAREDIMDAIEREK 620 V EA A RRG ++ +D++ A+E+ K Sbjct: 353 VVEAGYNAIRRGSRVITMDDMIKAVEKVK 381
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 430 Score = 184 bits (468), Expect = 1e-46 Identities = 104/207 (50%), Positives = 133/207 (64%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKTLLAKAVA E F V SE V+ F+G GA+ V+D+FK AKE APS Sbjct: 206 GILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPS 265 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DA+ R + + E +TL QLL EMDGFD+ V ++ ATNRP LD A Sbjct: 266 IIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPA 325 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 + RPGRF R + V PD +GR +IL +H RK+ L ED + + +A +T G VGA+L I Sbjct: 326 ILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNL--EEIAKMTEGCVGAELKAI 383 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R D V +D A+E+ Sbjct: 384 CTEAGMNAIRELRDYVTMDDFRKAVEK 410
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 184 bits (466), Expect = 2e-46 Identities = 103/187 (55%), Positives = 128/187 (68%), Gaps = 1/187 (0%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLA+A+AGEA +PFF + SEF E+ VG+GA RVRDLF +AK AP Sbjct: 236 GVLLVGPPGTGKTLLARAIAGEAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPC 295 Query: 183 IIFIDELDAVGGSR-GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 359 IIFIDE+D+VG R S + +QT+NQLL+EMDGF + +IV+AATNR LD AL Sbjct: 296 IIFIDEIDSVGSKRVSNSIHPYANQTINQLLSEMDGFTRNEGIIVIAATNRVDDLDKALL 355 Query: 360 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 539 RPGRF +V V PDL GR I +L K+ I ++A + G GAD+ N+VN Sbjct: 356 RPGRFDVRVTVPKPDLAGRVDIFNFYLSKI--VHSGGIDPKVLAKGSTGFTGADIENMVN 413 Query: 540 EAALLAA 560 +AAL AA Sbjct: 414 QAALKAA 420
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 184 bits (466), Expect = 2e-46 Identities = 103/209 (49%), Positives = 136/209 (65%), Gaps = 3/209 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTL+AKAVA E F +S E + + G R+R++F+EAKE APS Sbjct: 218 GVLLYGPPGTGKTLIAKAVANEVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPS 277 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 IIFIDE+D++ R + + + QLL MDG ++ VIV+AATNRP A+D AL R Sbjct: 278 IIFIDEIDSIAPKREEVTGEVERRVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRR 337 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 PGRF R++ +GVPD EGR++IL +H RK+PL ED ++ + +A +T G VGADL + E Sbjct: 338 PGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDL--EELAELTNGFVGADLEALCKE 395 Query: 543 AALLAARR---GGDIVAREDIMDAIEREK 620 AA+ A RR DI A E + IE K Sbjct: 396 AAMHALRRVLPEIDIEAEEIPAEVIENLK 424 Score = 157 bits (398), Expect = 2e-38 Identities = 83/188 (44%), Positives = 119/188 (63%), Gaps = 1/188 (0%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKTLLAKAVA E+ F SV E + +VG VR++F++A++ AP Sbjct: 491 GILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPC 550 Query: 183 IIFIDELDAVGGSRGRSFNDE-RDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 359 +IF DE+D++ RG + ++ ++QLLTE+DG + V+V+AATNRP +D AL Sbjct: 551 VIFFDEIDSLAPRRGGIGDSHVTERVVSQLLTELDGLEELKDVVVIAATNRPDMIDPALL 610 Query: 360 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 539 RPGR R +++ PD + R +I +HLR PL +D I + +A T G GAD+ + Sbjct: 611 RPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNI--EELAEKTEGYSGADIEAVCR 668 Query: 540 EAALLAAR 563 EA +LA R Sbjct: 669 EAGMLAIR 676
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 183 bits (465), Expect = 3e-46 Identities = 103/209 (49%), Positives = 137/209 (65%), Gaps = 3/209 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKAVA E+ F V ASEF + FVG GA VR++F+ A+ APS Sbjct: 170 GVLLYGPPGTGKTLLAKAVATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPS 229 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+FIDE+DA+G R G S E +TL QLL E+DGF V ++AATNR LD A Sbjct: 230 IVFIDEIDAIGAKRVDMGTSGEREIQRTLMQLLAEIDGFKPLDNVKIIAATNRLDILDPA 289 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R + V +P+ EGR++I ++L+K ++ D I D++A++T G GA++ N+ Sbjct: 290 LLRPGRFDRLIEVPLPNFEGRKEIFRIYLQK--MKTDGNIRYDILASMTEGFSGAEIKNV 347 Query: 534 VNEAALLAARRGGDIVAREDIMDAIEREK 620 EA +A R G V D++ AIE+ K Sbjct: 348 CTEAGYIAIRNGRKYVNMTDLITAIEKIK 376
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 179 bits (455), Expect = 5e-45 Identities = 104/207 (50%), Positives = 130/207 (62%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPG GKTL+AKA+A E F V SE V ++G GA V +LF+ AKE AP+ Sbjct: 173 GVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPT 232 Query: 183 IIFIDELDAVGGSR-GRSFNDERD--QTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DA+G R + ER+ +TL QLL EMDGFD V V+AATNRP LD A Sbjct: 233 IIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPA 292 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R + V +PD EGR +IL VH R++ L + L+A +T G GADL I Sbjct: 293 LLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLR---GVDLRLIAELTEGASGADLKAI 349 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R V +ED + AI++ Sbjct: 350 ATEAGMFAIRERRTYVTQEDFLKAIDK 376
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 179 bits (454), Expect = 6e-45 Identities = 102/207 (49%), Positives = 131/207 (63%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPG GKTL+AKA+A E F V SE V ++G GA V +LF+ AKE AP+ Sbjct: 176 GVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPT 235 Query: 183 IIFIDELDAVGGSR-GRSFNDERD--QTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DA+G R + ER+ +TL QLL EMDGFD V V+AATNRP LD A Sbjct: 236 IIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPA 295 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R + V +PD EGR +IL VH R++ L+ + ++A +T G GADL I Sbjct: 296 LLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLK---NVDLRVIAEITEGASGADLKAI 352 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R V +ED + A+++ Sbjct: 353 ATEAGMFAIRERRTYVTQEDFLKAVDK 379
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 177 bits (450), Expect = 2e-44 Identities = 101/207 (48%), Positives = 129/207 (62%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKAVA E F V SE V+ F+G GA VRD+FK AKE +P Sbjct: 184 GVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPC 243 Query: 183 IIFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DAV R S + E +TL QLL EMDGFDS V ++AATNRP LD A Sbjct: 244 IIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPA 303 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 + RPGRF R + + +PD +GR +IL +H K+ L+ + VA + +VGADL + Sbjct: 304 ILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNLK---GVDLREVAKIAENMVGADLKAV 360 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R + + +D +AI + Sbjct: 361 CTEAGMFAIREEREFIKMDDFREAISK 387
>SAV_SULAC (Q07590) SAV protein| Length = 780 Score = 177 bits (449), Expect = 2e-44 Identities = 93/188 (49%), Positives = 125/188 (66%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKTLLA+A+A E G F +V+ E + F G R+R++FKEA+E APS Sbjct: 248 GILLYGPPGTGKTLLARALANEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPS 307 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 IIFIDE+DA+ R + + + QLLT MDG +VIV+ ATNRP A+D AL R Sbjct: 308 IIFIDEIDAIAPKREDVTGEVEKRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRR 367 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 PGRF R++ + PD +GR+ IL VH R +P+ +D ++ D +A +T G GADLA + E Sbjct: 368 PGRFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDL--DKLAEMTYGYTGADLAALAKE 425 Query: 543 AALLAARR 566 AA+ A RR Sbjct: 426 AAIYALRR 433 Score = 164 bits (415), Expect = 2e-40 Identities = 88/188 (46%), Positives = 122/188 (64%), Gaps = 1/188 (0%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKT+LAKAVA E+G F +V E + +VG +R++F++A++AAP+ Sbjct: 523 GILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPT 582 Query: 183 IIFIDELDAVGGSRGRSFND-ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 359 +IF DE+D++ RG S + ++ +NQLL EMDG KV+++AATNRP LD AL Sbjct: 583 VIFFDEIDSIAPIRGLSTDSGVTERIVNQLLAEMDGIVPLNKVVIIAATNRPDILDPALL 642 Query: 360 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 539 RPGRF R ++V PD R +IL VH + VPL ED + + +A G GADL +V Sbjct: 643 RPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAED--VSLEDIAEKAEGYTGADLEALVR 700 Query: 540 EAALLAAR 563 EA + A R Sbjct: 701 EATINAMR 708
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 177 bits (448), Expect = 3e-44 Identities = 102/207 (49%), Positives = 130/207 (62%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPG GKTL+AKA+A E F V SE V ++G GA V +LF+ AKE AP+ Sbjct: 176 GVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPT 235 Query: 183 IIFIDELDAVGGSR-GRSFNDERD--QTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DA+G R + ER+ +TL QLL EMDGFD V V+AATNRP LD A Sbjct: 236 IIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPA 295 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R + V +PD EGR +IL VH R++ L+ + +A +T G GADL I Sbjct: 296 LLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLK---GVDLRAIAEMTEGASGADLKAI 352 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R V +ED + A+++ Sbjct: 353 ATEAGMFAIRERRTYVTQEDFLKAVDK 379
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 177 bits (448), Expect = 3e-44 Identities = 98/207 (47%), Positives = 130/207 (62%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL G PGTGKTLLAKAVA F V SE V+ ++G G+ VR++F+ A++ APS Sbjct: 195 GVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPS 254 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDELD++ R + E +TL QLL EMDGFD + ++AATNRP LD A Sbjct: 255 IIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPA 314 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 + RPGRF R V V +P +E R KIL +H K+ L ED + +A T G+ GADL I Sbjct: 315 ILRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDF--KKLAKATEGMSGADLKAI 372 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A RR ++V E+ ++A+E+ Sbjct: 373 ATEAGMFAVRRDKELVEMEEFLEAVEK 399
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 177 bits (448), Expect = 3e-44 Identities = 102/207 (49%), Positives = 130/207 (62%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPG GKTL+AKAVA F V SE V F+G GA V +LF+ AKE AP+ Sbjct: 174 GVLLYGPPGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPT 233 Query: 183 IIFIDELDAVGGSR-GRSFNDERD--QTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DA+G R + ER+ +TL QLL EMDGFD V V+AATNRP LD A Sbjct: 234 IIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPA 293 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGRF R + V +PD +GR +IL VH RK+ L+ + ++A +T G GADL I Sbjct: 294 LLRPGRFDRLIEVPLPDYQGRLEILKVHTRKMNLK---GVDLRVIAEITEGASGADLKAI 350 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R V ++D + A+++ Sbjct: 351 ATEAGMFAIRDRRTYVTQDDFLKAVDK 377
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 176 bits (447), Expect = 4e-44 Identities = 94/197 (47%), Positives = 131/197 (66%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKTL+A+AVA E G FF ++ E + G + +R F+EA++ AP+ Sbjct: 240 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA 299 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 IIFIDELDA+ R ++ + + ++QLLT MDG VIVMAATNRP ++D AL R Sbjct: 300 IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 359 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 GRF R+V +G+PD GR +IL +H + + L +D ++ + VAN T G VGADLA + +E Sbjct: 360 FGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDL--EQVANETHGHVGADLAALCSE 417 Query: 543 AALLAARRGGDIVARED 593 AAL A R+ D++ ED Sbjct: 418 AALQAIRKKMDLIDLED 434 Score = 162 bits (409), Expect = 1e-39 Identities = 87/209 (41%), Positives = 124/209 (59%), Gaps = 3/209 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL GPPG GKTLLAKA+A E F S+ E + M+ G A VR++F +A++AAP Sbjct: 513 GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPC 572 Query: 183 IIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 ++F DELD++ +RG + D D+ +NQ+LTEMDG V ++ ATNRP +D A Sbjct: 573 VLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPA 632 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 + RPGR + +++ +PD + R IL +LRK P+ +D ++ D +A +T G GADL I Sbjct: 633 ILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDV--DFLAKMTNGFSGADLTEI 690 Query: 534 VNEAALLAARRGGDIVAREDIMDAIEREK 620 A LA RE I + I RE+ Sbjct: 691 CQRACKLA--------IRESIENEIRRER 711
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 176 bits (447), Expect = 4e-44 Identities = 94/197 (47%), Positives = 131/197 (66%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKTL+A+AVA E G FF ++ E + G + +R F+EA++ AP+ Sbjct: 239 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA 298 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 IIFIDELDA+ R ++ + + ++QLLT MDG VIVMAATNRP ++D AL R Sbjct: 299 IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 358 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 GRF R+V +G+PD GR +IL +H + + L +D ++ + VAN T G VGADLA + +E Sbjct: 359 FGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDL--EQVANETHGHVGADLAALCSE 416 Query: 543 AALLAARRGGDIVARED 593 AAL A R+ D++ ED Sbjct: 417 AALQAIRKKMDLIDLED 433 Score = 160 bits (404), Expect = 4e-39 Identities = 86/209 (41%), Positives = 124/209 (59%), Gaps = 3/209 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL GPPG GKTLLAKA+A E F S+ E + M+ G A VR++F +A++AAP Sbjct: 512 GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPC 571 Query: 183 IIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 ++F DELD++ +RG + D D+ +NQ+LTEMDG + V ++ ATNRP +D A Sbjct: 572 VLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPA 631 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 + RPGR + +++ +PD + R IL +LRK P+ +D ++ + +A +T G GADL I Sbjct: 632 ILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDL--EFLAKMTNGFSGADLTEI 689 Query: 534 VNEAALLAARRGGDIVAREDIMDAIEREK 620 A LA RE I I RE+ Sbjct: 690 CQRACKLA--------IRESIESEIRRER 710
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 176 bits (447), Expect = 4e-44 Identities = 94/197 (47%), Positives = 131/197 (66%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKTL+A+AVA E G FF ++ E + G + +R F+EA++ AP+ Sbjct: 239 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA 298 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 IIFIDELDA+ R ++ + + ++QLLT MDG VIVMAATNRP ++D AL R Sbjct: 299 IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 358 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 GRF R+V +G+PD GR +IL +H + + L +D ++ + VAN T G VGADLA + +E Sbjct: 359 FGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDL--EQVANETHGHVGADLAALCSE 416 Query: 543 AALLAARRGGDIVARED 593 AAL A R+ D++ ED Sbjct: 417 AALQAIRKKMDLIDLED 433 Score = 160 bits (404), Expect = 4e-39 Identities = 86/209 (41%), Positives = 124/209 (59%), Gaps = 3/209 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL GPPG GKTLLAKA+A E F S+ E + M+ G A VR++F +A++AAP Sbjct: 512 GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPC 571 Query: 183 IIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 ++F DELD++ +RG + D D+ +NQ+LTEMDG + V ++ ATNRP +D A Sbjct: 572 VLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPA 631 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 + RPGR + +++ +PD + R IL +LRK P+ +D ++ + +A +T G GADL I Sbjct: 632 ILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDL--EFLAKMTNGFSGADLTEI 689 Query: 534 VNEAALLAARRGGDIVAREDIMDAIEREK 620 A LA RE I I RE+ Sbjct: 690 CQRACKLA--------IRESIESEIRRER 710
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 176 bits (447), Expect = 4e-44 Identities = 94/197 (47%), Positives = 131/197 (66%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKTL+A+AVA E G FF ++ E + G + +R F+EA++ AP+ Sbjct: 239 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA 298 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 IIFIDELDA+ R ++ + + ++QLLT MDG VIVMAATNRP ++D AL R Sbjct: 299 IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 358 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 GRF R+V +G+PD GR +IL +H + + L +D ++ + VAN T G VGADLA + +E Sbjct: 359 FGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDL--EQVANETHGHVGADLAALCSE 416 Query: 543 AALLAARRGGDIVARED 593 AAL A R+ D++ ED Sbjct: 417 AALQAIRKKMDLIDLED 433 Score = 160 bits (404), Expect = 4e-39 Identities = 86/209 (41%), Positives = 124/209 (59%), Gaps = 3/209 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL GPPG GKTLLAKA+A E F S+ E + M+ G A VR++F +A++AAP Sbjct: 512 GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPC 571 Query: 183 IIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 ++F DELD++ +RG + D D+ +NQ+LTEMDG + V ++ ATNRP +D A Sbjct: 572 VLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPA 631 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 + RPGR + +++ +PD + R IL +LRK P+ +D ++ + +A +T G GADL I Sbjct: 632 ILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDL--EFLAKMTNGFSGADLTEI 689 Query: 534 VNEAALLAARRGGDIVAREDIMDAIEREK 620 A LA RE I I RE+ Sbjct: 690 CQRACKLA--------IRESIESEIRRER 710
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 176 bits (447), Expect = 4e-44 Identities = 94/197 (47%), Positives = 131/197 (66%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKTL+A+AVA E G FF ++ E + G + +R F+EA++ AP+ Sbjct: 239 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA 298 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 IIFIDELDA+ R ++ + + ++QLLT MDG VIVMAATNRP ++D AL R Sbjct: 299 IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 358 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 GRF R+V +G+PD GR +IL +H + + L +D ++ + VAN T G VGADLA + +E Sbjct: 359 FGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDL--EQVANETHGHVGADLAALCSE 416 Query: 543 AALLAARRGGDIVARED 593 AAL A R+ D++ ED Sbjct: 417 AALQAIRKKMDLIDLED 433 Score = 160 bits (404), Expect = 4e-39 Identities = 86/209 (41%), Positives = 124/209 (59%), Gaps = 3/209 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL GPPG GKTLLAKA+A E F S+ E + M+ G A VR++F +A++AAP Sbjct: 512 GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPC 571 Query: 183 IIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 ++F DELD++ +RG + D D+ +NQ+LTEMDG + V ++ ATNRP +D A Sbjct: 572 VLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPA 631 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 + RPGR + +++ +PD + R IL +LRK P+ +D ++ + +A +T G GADL I Sbjct: 632 ILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDL--EFLAKMTNGFSGADLTEI 689 Query: 534 VNEAALLAARRGGDIVAREDIMDAIEREK 620 A LA RE I I RE+ Sbjct: 690 CQRACKLA--------IRESIESEIRRER 710
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 175 bits (443), Expect = 1e-43 Identities = 90/207 (43%), Positives = 131/207 (63%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G++L GPPGTGKTL A+AVA F V SE V+ +VG GA VR+LF+ A+ Sbjct: 215 GIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKAC 274 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIF DE+DA+GG+R G ++E +T+ +L+T++DGFD + V+ ATNRP LD A Sbjct: 275 IIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEA 334 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RKV G+PDLEGR IL +H + + +++D I +L+A + P GA+L ++ Sbjct: 335 LMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKD--IRWELIARLCPSQTGAELRSV 392 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R + +D +DA+++ Sbjct: 393 CTEAGMFAIRARRRVATEKDFLDAVQK 419
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 174 bits (441), Expect = 2e-43 Identities = 94/207 (45%), Positives = 130/207 (62%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLA+AVA G+ F V +S V+ ++G A +R++F AKE P Sbjct: 168 GVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPC 227 Query: 183 IIFIDELDAVGG---SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 +IF+DE+DA+GG S G S + E +TL +LL +MDGFD + ++ ATNRP LD A Sbjct: 228 VIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPA 287 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ + +P+ GR +IL +HL KV + EI + + +T G GADL N+ Sbjct: 288 LLRPGRLDRKIEIPLPNEVGRMEILKIHLEKV--SKQGEIDYEALVKLTDGTNGADLRNV 345 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 V EA +A + D V + D+M A + Sbjct: 346 VTEAGFIAIKEDRDYVIQSDLMSAARK 372
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 174 bits (440), Expect = 3e-43 Identities = 98/207 (47%), Positives = 129/207 (62%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL G PGTGKTLLAKAVA F V SE V+ ++G G+ VR++F+ A++ APS Sbjct: 195 GVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPS 254 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDELD++ R + E +TL QLL EMDGFD + ++AATNRP LD A Sbjct: 255 IIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPA 314 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 + RPGRF R V V +P +E R KIL +H K+ L D + +A VT G+ GADL I Sbjct: 315 ILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDF--KKLAKVTEGMSGADLKAI 372 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R+ +V ED ++A+E+ Sbjct: 373 ATEAGMFAVRKDKALVEMEDFLEAVEK 399
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 172 bits (437), Expect = 6e-43 Identities = 91/188 (48%), Positives = 126/188 (67%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKAVA E FFS++ E + + G ++R++F++AK+ +PS Sbjct: 225 GVLLHGPPGTGKTLLAKAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPS 284 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 IIFIDELD++ R + + + QLLT MDG + +VIV+AATNR A+D AL R Sbjct: 285 IIFIDELDSIAPKREDVTGEVERRVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRR 344 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 PGRF R++ +GVPD GR +IL +H R +PL +D + +A+ T G VGAD+ ++ E Sbjct: 345 PGRFDREIEIGVPDEIGREEILKIHTRGMPLSDDVNL--STLADDTHGFVGADIESLSKE 402 Query: 543 AALLAARR 566 AA+ A RR Sbjct: 403 AAMRALRR 410 Score = 165 bits (418), Expect = 9e-41 Identities = 90/192 (46%), Positives = 123/192 (64%), Gaps = 1/192 (0%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTL+AKAVA E F SV + + +VG +R F++A++ AP+ Sbjct: 498 GVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVAPT 557 Query: 183 IIFIDELDAVGGSRGRS-FNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 359 +IF DELD++ RG++ N+ ++ +NQLLTE+DG + +V+V+AATNRP +D AL Sbjct: 558 VIFFDELDSLAPGRGQTGGNNVSERVVNQLLTELDGLEEMEEVMVIAATNRPDIIDPALI 617 Query: 360 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 539 R GRF R V VG P +EGR +IL +H + PL D + +A G VG+DLANI Sbjct: 618 RSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAAD--VSLRELAERADGYVGSDLANIAR 675 Query: 540 EAALLAARRGGD 575 EAA+ A R D Sbjct: 676 EAAIEALRDDED 687
>VAT_THEAC (O05209) VCP-like ATPase| Length = 745 Score = 172 bits (435), Expect = 1e-42 Identities = 90/191 (47%), Positives = 127/191 (66%), Gaps = 3/191 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GV+L GPPGTGKTL+A+AVA E+G F S++ E + + G+ ++R++F +A+E APS Sbjct: 226 GVILYGPPGTGKTLIARAVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPS 285 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 IIFIDE+D++ R + + + QLLT MDG VIV+ ATNR A+D AL R Sbjct: 286 IIFIDEIDSIAPKREEVQGEVERRVVAQLLTLMDGMKERGHVIVIGATNRIDAIDPALRR 345 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPL---EEDSEIICDLVANVTPGLVGADLANI 533 PGRF R++ +GVPD GR++IL +H R +PL EE+ + +A+ T G VGADLA + Sbjct: 346 PGRFDREIEIGVPDRNGRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAAL 405 Query: 534 VNEAALLAARR 566 V E+A+ A RR Sbjct: 406 VRESAMNALRR 416 Score = 161 bits (407), Expect = 2e-39 Identities = 87/206 (42%), Positives = 130/206 (63%), Gaps = 3/206 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G LL GPPG GKTLLAKAVA E+ F S+ E + +VG +R++FK+AK+ AP+ Sbjct: 503 GFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPA 562 Query: 183 IIFIDELDAVGGSRG-RSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 359 I+F+DE+D++ RG S + ++ +NQLLT +DG + V+V+ ATNRP +D AL Sbjct: 563 IVFLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIEVMNGVVVIGATNRPDIMDPALL 622 Query: 360 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 539 R GRF + +++ PD E R IL VH + +PL D ++ + +A T G VGADL N+ Sbjct: 623 RAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDL--NDIAQRTEGYVGADLENLCR 680 Query: 540 EAALLAARRGGDI--VAREDIMDAIE 611 EA + A R D V++++ +DA++ Sbjct: 681 EAGMNAYRENPDATSVSQKNFLDALK 706
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 170 bits (431), Expect = 3e-42 Identities = 101/207 (48%), Positives = 125/207 (60%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKAVA + F V SEFV+ ++G GA VR++F+ AKE APS Sbjct: 177 GVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPS 236 Query: 183 IIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDELDA+ R S E +T+ QLL E+DGFD V V+ ATNR LD A Sbjct: 237 IIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPA 296 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 + RPGRF R + V +P EGR +I +H RK+ L ED + +A +T G GAD+ I Sbjct: 297 ILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDF--KELARITEGASGADIKAI 354 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R V D AIE+ Sbjct: 355 CTEAGMFAIREERAKVTMLDFTKAIEK 381
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 170 bits (430), Expect = 4e-42 Identities = 91/207 (43%), Positives = 128/207 (61%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL GPPGTGKTLLA+AVA F V SE V+ +VG GA VR+LF+ A+ Sbjct: 204 GVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKAC 263 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+F DE+DA+GG+R G ++E +T+ +++ ++DGFD+ + V+ ATNRP LD A Sbjct: 264 IVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPA 323 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RKV G+PDLEGR +I +H R + E D I +L+A + P GAD+ ++ Sbjct: 324 LLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERD--IRFELLARLCPNSTGADIRSV 381 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R V +D +DA+ + Sbjct: 382 CTEAGMYAIRARRKTVTEKDFLDAVNK 408
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 170 bits (430), Expect = 4e-42 Identities = 91/207 (43%), Positives = 128/207 (61%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL GPPGTGKTLLA+AVA F V SE V+ +VG GA VR+LF+ A+ Sbjct: 204 GVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKAC 263 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+F DE+DA+GG+R G ++E +T+ +++ ++DGFD+ + V+ ATNRP LD A Sbjct: 264 IVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPA 323 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RKV G+PDLEGR +I +H R + E D I +L+A + P GAD+ ++ Sbjct: 324 LLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERD--IRFELLARLCPNSTGADIRSV 381 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R V +D +DA+ + Sbjct: 382 CTEAGMYAIRARRKTVTEKDFLDAVNK 408
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 169 bits (427), Expect = 8e-42 Identities = 91/205 (44%), Positives = 132/205 (64%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPG+GKTL+A+AVA E G FF ++ E + G + +R F+EA++ APS Sbjct: 243 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 302 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 IIFIDE+D++ R ++ + + ++QLLT MDG S VIVM ATNRP ++D AL R Sbjct: 303 IIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRR 362 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 GRF R++ +GVPD GR ++L +H + + L ED ++ + ++ T G VGADLA + E Sbjct: 363 FGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDL--ERISKDTHGYVGADLAALCTE 420 Query: 543 AALLAARRGGDIVAREDIMDAIERE 617 AAL R D++ ED D+I+ E Sbjct: 421 AALQCIREKMDVIDLED--DSIDAE 443 Score = 158 bits (399), Expect = 1e-38 Identities = 89/210 (42%), Positives = 121/210 (57%), Gaps = 4/210 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL GPPG GKTLLAKA+A E F SV E + M+ G A VR++F +A+++AP Sbjct: 516 GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPC 575 Query: 183 IIFIDELDAV----GGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 350 ++F DELD++ GG G D+ LNQLLTEMDG ++ V ++ ATNRP +DS Sbjct: 576 VLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDS 635 Query: 351 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 530 AL RPGR + +++ +PD + R I LRK P+ +D +I +A T G GAD+ Sbjct: 636 ALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDI--GALAKYTQGFSGADITE 693 Query: 531 IVNEAALLAARRGGDIVAREDIMDAIEREK 620 I A A RE+I IE+EK Sbjct: 694 ICQRACKYA--------IRENIEKDIEKEK 715
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 169 bits (427), Expect = 8e-42 Identities = 91/205 (44%), Positives = 132/205 (64%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPG+GKTL+A+AVA E G FF ++ E + G + +R F+EA++ APS Sbjct: 243 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 302 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 IIFIDE+D++ R ++ + + ++QLLT MDG S VIVM ATNRP ++D AL R Sbjct: 303 IIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRR 362 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 GRF R++ +GVPD GR ++L +H + + L ED ++ + ++ T G VGADLA + E Sbjct: 363 FGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDL--ERISKDTHGYVGADLAALCTE 420 Query: 543 AALLAARRGGDIVAREDIMDAIERE 617 AAL R D++ ED D+I+ E Sbjct: 421 AALQCIREKMDVIDLED--DSIDAE 443 Score = 158 bits (399), Expect = 1e-38 Identities = 88/209 (42%), Positives = 121/209 (57%), Gaps = 3/209 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL GPPG GKTLLAKA+A E F SV E + M+ G A VR++F +A+++AP Sbjct: 516 GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPC 575 Query: 183 IIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 ++F DELD++ RG S D D+ LNQLLTEMDG ++ V ++ ATNRP +DSA Sbjct: 576 VLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSA 635 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR + +++ +PD + R I LRK P+ +D ++ +A T G GAD+ I Sbjct: 636 LLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTA--LAKYTQGFSGADITEI 693 Query: 534 VNEAALLAARRGGDIVAREDIMDAIEREK 620 A A RE+I IE E+ Sbjct: 694 CQRACKYA--------IRENIEKDIENER 714
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 168 bits (425), Expect = 1e-41 Identities = 90/207 (43%), Positives = 128/207 (61%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTL A+AVA F V SE V+ +VG GA VR+LF+ A+ Sbjct: 213 GVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKAC 272 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 +IF DE+DAVGG+R G+ ++E +T+ +L+ ++DGFD + V+ ATNRP LD A Sbjct: 273 LIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPA 332 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RKV +PDL GR IL +H +++ +E D I DL+A + P GA++ ++ Sbjct: 333 LMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERD--IRYDLLARLCPNSTGAEIRSV 390 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R + +D ++AI + Sbjct: 391 CTEAGMFAIRARRKVATEKDFLEAINK 417
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 168 bits (425), Expect = 1e-41 Identities = 89/207 (42%), Positives = 128/207 (61%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G LL GPPGTGKTLLA+AVA + F V +S V+ ++G A +R++F A++ P Sbjct: 169 GCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPC 228 Query: 183 IIFIDELDAVGG---SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIF+DE+DA+GG S G S + E +TL +LL +MDGFD+ +V ++ ATNRP LD A Sbjct: 229 IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPA 288 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ + +P+ + R IL +H P+ + EI + + ++ G GADL N+ Sbjct: 289 LLRPGRLDRKIHIDLPNEQARLDILKIHAG--PITKHGEIDYEAIVKLSDGFNGADLRNV 346 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R D V +ED M A+ + Sbjct: 347 CTEAGMFAIRADHDFVVQEDFMKAVRK 373
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 168 bits (425), Expect = 1e-41 Identities = 89/207 (42%), Positives = 128/207 (61%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G LL GPPGTGKTLLA+AVA + F V +S V+ ++G A +R++F A++ P Sbjct: 169 GCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPC 228 Query: 183 IIFIDELDAVGG---SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIF+DE+DA+GG S G S + E +TL +LL +MDGFD+ +V ++ ATNRP LD A Sbjct: 229 IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPA 288 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ + +P+ + R IL +H P+ + EI + + ++ G GADL N+ Sbjct: 289 LLRPGRLDRKIHIDLPNEQARLDILKIHAG--PITKHGEIDYEAIVKLSDGFNGADLRNV 346 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R D V +ED M A+ + Sbjct: 347 CTEAGMFAIRADHDFVVQEDFMKAVRK 373
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 168 bits (425), Expect = 1e-41 Identities = 89/207 (42%), Positives = 128/207 (61%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G LL GPPGTGKTLLA+AVA + F V +S V+ ++G A +R++F A++ P Sbjct: 169 GCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPC 228 Query: 183 IIFIDELDAVGG---SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIF+DE+DA+GG S G S + E +TL +LL +MDGFD+ +V ++ ATNRP LD A Sbjct: 229 IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPA 288 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ + +P+ + R IL +H P+ + EI + + ++ G GADL N+ Sbjct: 289 LLRPGRLDRKIHIDLPNEQARLDILKIHAG--PITKHGEIDYEAIVKLSDGFNGADLRNV 346 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R D V +ED M A+ + Sbjct: 347 CTEAGMFAIRADHDFVVQEDFMKAVRK 373
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 167 bits (424), Expect = 2e-41 Identities = 90/207 (43%), Positives = 128/207 (61%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G LL GPPGTGKTLLA+AVA + F V +S V+ ++G A +R++F A++ P Sbjct: 186 GCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPC 245 Query: 183 IIFIDELDAVGG---SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+F+DE+DA+GG S G S + E +TL +LL ++DGFDS KV V+ ATNRP LD A Sbjct: 246 IVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPA 305 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ +G+P+ + R +IL +H K+ + EI + V ++ G ADL N+ Sbjct: 306 LLRPGRLDRKIEIGLPNEQSRLEILKIHSNKI--TKHGEIDFEAVVKLSDGFSAADLRNV 363 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R + V ED M A+ + Sbjct: 364 CTEAGMFAIRAEREFVIDEDFMKAVRK 390
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 167 bits (424), Expect = 2e-41 Identities = 91/205 (44%), Positives = 130/205 (63%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPG+GKTL+A+AVA E G FF ++ E + G + +R F+EA++ APS Sbjct: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 IIFIDE+D++ R ++ + + ++QLLT MDG S VIVM ATNRP ++D AL R Sbjct: 304 IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRR 363 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 GRF R++ +GVPD GR ++L +H + + L E E+ + ++ T G VGADLA + E Sbjct: 364 FGRFDREIDIGVPDEVGRLEVLGIHTKNMKLAE--EVDLERISKDTHGYVGADLAALCTE 421 Query: 543 AALLAARRGGDIVAREDIMDAIERE 617 AAL R D++ ED D I+ E Sbjct: 422 AALQCIREKMDVLDLED--DTIDAE 444 Score = 159 bits (402), Expect = 6e-39 Identities = 90/209 (43%), Positives = 122/209 (58%), Gaps = 3/209 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL GPPG GKTLLAKA+A E F SV E + M+ G A VR++F +A+++AP Sbjct: 517 GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPC 576 Query: 183 IIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 ++F DELD++ RG S D D+ LNQLLTEMDG ++ V ++ ATNRP +D A Sbjct: 577 VLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPA 636 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR + +++ +PD + R +I LRK PL +D ++ +A T G GAD+ I Sbjct: 637 LLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDIDL--RALAKHTQGFSGADVTEI 694 Query: 534 VNEAALLAARRGGDIVAREDIMDAIEREK 620 A A RE+I IEREK Sbjct: 695 CQRACKYA--------IRENIEKDIEREK 715
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 167 bits (424), Expect = 2e-41 Identities = 90/207 (43%), Positives = 127/207 (61%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL GPPGTGKTLLA+AVA F V SE V+ +VG GA VR+LF+ A+ Sbjct: 203 GVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKAC 262 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+F DE+DA+GG+R G ++E +T+ +++ ++DGFD+ + V+ ATNRP LD A Sbjct: 263 IVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPA 322 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RKV G+PDLE R +I +H R + E D I +L+A + P GAD+ ++ Sbjct: 323 LLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD--IRFELLARLCPNSTGADIRSV 380 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R V +D +DA+ + Sbjct: 381 CTEAGMYAIRARRKTVTEKDFLDAVNK 407
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 167 bits (424), Expect = 2e-41 Identities = 90/207 (43%), Positives = 127/207 (61%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL GPPGTGKTLLA+AVA F V SE V+ +VG GA VR+LF+ A+ Sbjct: 204 GVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKAC 263 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+F DE+DA+GG+R G ++E +T+ +++ ++DGFD+ + V+ ATNRP LD A Sbjct: 264 IVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPA 323 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RKV G+PDLE R +I +H R + E D I +L+A + P GAD+ ++ Sbjct: 324 LLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD--IRFELLARLCPNSTGADIRSV 381 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R V +D +DA+ + Sbjct: 382 CTEAGMYAIRARRKTVTEKDFLDAVNK 408
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 167 bits (423), Expect = 2e-41 Identities = 89/207 (42%), Positives = 126/207 (60%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKTL A+AVA F V SE V+ +VG GA VR+LF+ A+ Sbjct: 245 GILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKAC 304 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIF DE+DAVGG+R G ++E +T+ +L+T++DGFD + VM ATNRP LD A Sbjct: 305 IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPA 364 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RKV +PDLEGR I +H + + +E I +L++ + P GA+L ++ Sbjct: 365 LLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERG--IRWELISRLCPNSTGAELRSV 422 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R + +D + A+++ Sbjct: 423 CTEAGMFAIRARRKVATEKDFLKAVDK 449
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 167 bits (423), Expect = 2e-41 Identities = 87/197 (44%), Positives = 127/197 (64%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPG+GKTL+A+AVA E G FF ++ E + G + +R F+EA++ APS Sbjct: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 IIFIDE+D++ R ++ + + ++QLLT MDG S VIV+ ATNRP ++D AL R Sbjct: 304 IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRR 363 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 GRF R++ +GVPD GR ++L +H + + L +D ++ + +A T G VGADLA + E Sbjct: 364 FGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDL--ERIAKDTHGYVGADLAALCTE 421 Query: 543 AALLAARRGGDIVARED 593 AAL R D++ ED Sbjct: 422 AALQCIREKMDVIDLED 438 Score = 155 bits (392), Expect = 9e-38 Identities = 87/209 (41%), Positives = 121/209 (57%), Gaps = 3/209 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL GPPG GKTLLAKA+A E F SV E + M+ G A VR++F +A+++AP Sbjct: 517 GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPC 576 Query: 183 IIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 ++F DELD++ RG S D D+ LNQLLTEMDG + V ++ ATNRP +D A Sbjct: 577 VLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPA 636 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR + +++ +PD + R +I LRK P+ ++ ++ +A T G GAD+ I Sbjct: 637 LLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDL--RALARHTQGFSGADITEI 694 Query: 534 VNEAALLAARRGGDIVAREDIMDAIEREK 620 A A RE+I IERE+ Sbjct: 695 CQRACKYA--------IRENIEKDIERER 715
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 167 bits (423), Expect = 2e-41 Identities = 88/197 (44%), Positives = 127/197 (64%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPG+GKTL+A+AVA E G FF ++ E + G + +R F+EA++ APS Sbjct: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 IIFIDE+D++ R ++ + + ++QLLT MDG S VIVM ATNRP ++D AL R Sbjct: 304 IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRR 363 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 GRF R++ +GVPD GR ++L +H + + L ED ++ + V+ T G VGADLA + E Sbjct: 364 FGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDL--ERVSKDTHGYVGADLAALCTE 421 Query: 543 AALLAARRGGDIVARED 593 AAL R D++ +D Sbjct: 422 AALQCIREKMDVIDLDD 438 Score = 155 bits (392), Expect = 9e-38 Identities = 86/209 (41%), Positives = 122/209 (58%), Gaps = 3/209 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL GPPG GKTLLAKA+A E F S+ E + M+ G A VR++F +A+++AP Sbjct: 517 GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPC 576 Query: 183 IIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 ++F DELD++ RG S D D+ LNQLLTEMDG ++ V ++ ATNRP +D A Sbjct: 577 VLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPA 636 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR + +++ +PD E R +I LRK P+ +D ++ +A T G GAD+ I Sbjct: 637 LLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDL--RALAKYTQGFSGADITEI 694 Query: 534 VNEAALLAARRGGDIVAREDIMDAIEREK 620 +R RE+I IE+E+ Sbjct: 695 --------CQRSCKYAIRENIEKDIEKER 715
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 166 bits (421), Expect = 4e-41 Identities = 88/207 (42%), Positives = 126/207 (60%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTL A+AVA F V SE V+ +VG GA VR+LF+ A+ Sbjct: 210 GVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKAC 269 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 +IF DE+DA+GG+R G ++E +T+ +L+ ++DGFD + V+ ATNRP LD A Sbjct: 270 LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPA 329 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ +PDLEGR I +H R + +E D I +L+A + P GA++ ++ Sbjct: 330 LMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD--IRFELLARLCPNSTGAEIRSV 387 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R I +D ++A+ + Sbjct: 388 CTEAGMFAIRARRKIATEKDFLEAVNK 414
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 166 bits (421), Expect = 4e-41 Identities = 88/207 (42%), Positives = 126/207 (60%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTL A+AVA F V SE V+ +VG GA VR+LF+ A+ Sbjct: 210 GVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKAC 269 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 +IF DE+DA+GG+R G ++E +T+ +L+ ++DGFD + V+ ATNRP LD A Sbjct: 270 LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPA 329 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ +PDLEGR I +H R + +E D I +L+A + P GA++ ++ Sbjct: 330 LMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD--IRFELLARLCPNSTGAEIRSV 387 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R I +D ++A+ + Sbjct: 388 CTEAGMFAIRARRKIATEKDFLEAVNK 414
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 166 bits (421), Expect = 4e-41 Identities = 88/207 (42%), Positives = 126/207 (60%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTL A+AVA F V SE V+ +VG GA VR+LF+ A+ Sbjct: 210 GVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKAC 269 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 +IF DE+DA+GG+R G ++E +T+ +L+ ++DGFD + V+ ATNRP LD A Sbjct: 270 LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPA 329 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ +PDLEGR I +H R + +E D I +L+A + P GA++ ++ Sbjct: 330 LMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD--IRFELLARLCPNSTGAEIRSV 387 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R I +D ++A+ + Sbjct: 388 CTEAGMFAIRARRKIATEKDFLEAVNK 414
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 166 bits (421), Expect = 4e-41 Identities = 90/189 (47%), Positives = 117/189 (61%), Gaps = 2/189 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL GPPGTGKTLLAKA+A E F SV E + M+ G + VRD+F +A+ AAP Sbjct: 533 GVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPC 592 Query: 183 IIFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 356 ++F+DELD++ +RG S D D+ +NQLLTEMDG +S V V+ ATNRP +D AL Sbjct: 593 VVFLDELDSIAKARGASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPAL 652 Query: 357 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 536 RPGR + ++V +PD E R IL LR P+ ED ++ VA T G GADL +V Sbjct: 653 MRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDL--RAVAKATHGFSGADLEFVV 710 Query: 537 NEAALLAAR 563 A LA + Sbjct: 711 QRAVKLAIK 719 Score = 164 bits (414), Expect = 3e-40 Identities = 87/202 (43%), Positives = 133/202 (65%), Gaps = 1/202 (0%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+L+ GPPGTGKTL+A+AVA E G FF ++ E + G + +R F+EA++ +P+ Sbjct: 260 GILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPA 319 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 IIFIDE+D++ R ++ + + ++QLLT MDG + V+VMAATNRP ++D AL R Sbjct: 320 IIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRR 379 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 GRF R+V VG+PD GR +IL +H + + L +D ++ + +A T G VG+DLA++ +E Sbjct: 380 FGRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDL--EQIAAETHGYVGSDLASLCSE 437 Query: 543 AALLAARRGGDIV-AREDIMDA 605 AA+ R D++ ED +DA Sbjct: 438 AAMQQIREKMDMIDLDEDEIDA 459
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 166 bits (420), Expect = 5e-41 Identities = 87/207 (42%), Positives = 126/207 (60%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTL A+AVA F V SE V+ +VG GA VR+LF+ A+ Sbjct: 211 GVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKAC 270 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 +IF DE+DA+GG+R G ++E +T+ +L+ ++DGFD + V+ ATNRP LD A Sbjct: 271 LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPA 330 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ +PDLEGR I +H R + +E D I +L+A + P GA++ ++ Sbjct: 331 LMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD--IRFELLARLCPNSTGAEIRSV 388 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R + +D ++A+ + Sbjct: 389 CTEAGMFAIRARRKVATEKDFLEAVNK 415
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 166 bits (420), Expect = 5e-41 Identities = 89/190 (46%), Positives = 117/190 (61%), Gaps = 3/190 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL GPPGTGKTLLAKAVA E F SV E + M+ G + +RD+F +A+ AAP+ Sbjct: 523 GVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPT 582 Query: 183 IIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 ++F+DELD++ +RG S D D+ +NQLLTEMDG ++ V V+ ATNRP +D A Sbjct: 583 VVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPA 642 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 + RPGR + ++V +PD R IL LRK PLE E+ +A T G GADL I Sbjct: 643 ILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTA--IAKATQGFSGADLLYI 700 Query: 534 VNEAALLAAR 563 V AA A + Sbjct: 701 VQRAAKYAIK 710 Score = 164 bits (415), Expect = 2e-40 Identities = 86/202 (42%), Positives = 133/202 (65%), Gaps = 1/202 (0%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPGTGKTL+A+AVA E G FF ++ E + G + +R F+EA++ AP+ Sbjct: 250 GVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPA 309 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 IIFIDE+D++ R ++ + + ++QLLT MDG + V+V+AATNRP ++D AL R Sbjct: 310 IIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRR 369 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 GRF R+V +G+PD GR ++L +H + + L +D ++ + +A T G VGAD+A++ +E Sbjct: 370 FGRFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDL--EALAAETHGYVGADIASLCSE 427 Query: 543 AALLAARRGGDIV-AREDIMDA 605 AA+ R D++ ED +DA Sbjct: 428 AAMQQIREKMDLIDLDEDEIDA 449
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 166 bits (420), Expect = 5e-41 Identities = 87/205 (42%), Positives = 132/205 (64%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKTL+A+AVA E G FF ++ E + G + +R F E ++ +P+ Sbjct: 245 GILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPA 304 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 I+FIDE+DA+ R ++ + + ++QLLT MDG + V+V+AATNRP ++D AL R Sbjct: 305 ILFIDEIDAIAPKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRR 364 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 GRF R++ +G+PD GR +IL +H + + L ED ++ + VAN G VGADLA++ +E Sbjct: 365 FGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDL--EQVANECHGFVGADLASLCSE 422 Query: 543 AALLAARRGGDIVAREDIMDAIERE 617 AA+ R +++ ED D I+ E Sbjct: 423 AAIQQIREKMELIDLED--DTIDAE 445 Score = 157 bits (397), Expect = 2e-38 Identities = 84/200 (42%), Positives = 118/200 (59%), Gaps = 3/200 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL GPPG GKTLLAKA+A E F S+ E + M+ G A VRD+F +A+ AAP Sbjct: 518 GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPC 577 Query: 183 IIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 ++F DELD++ +RG S D D+ +NQ+LTEMDG ++ V ++ ATNRP +D A Sbjct: 578 VLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPA 637 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 + RPGR + +++ +PD R +I LRK PL D ++ + +A T G GADL I Sbjct: 638 VLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDL--NFLAKNTVGFSGADLTEI 695 Query: 534 VNEAALLAARRGGDIVARED 593 A LA R + R++ Sbjct: 696 CQRACKLAIRESIEREIRQE 715
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 163 bits (413), Expect = 3e-40 Identities = 92/207 (44%), Positives = 125/207 (60%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKAVA G F AS V+ ++G A +R++F AKE P Sbjct: 217 GVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPC 276 Query: 183 IIFIDELDAVGG---SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIF+DE+DA+GG S G S + E +TL +LLT+MDGFD+ + ++ ATNRP LD A Sbjct: 277 IIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPA 336 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RKV + +P+ GR +I +H KV ++ E + ++ G GAD+ N Sbjct: 337 LLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKV--KKTGEFDFEAAVKMSDGFNGADIRNC 394 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA A R D + +D+M A+ + Sbjct: 395 ATEAGFFAIRDDRDHINPDDLMKAVRK 421
>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome| regulatory subunit 1) Length = 411 Score = 161 bits (408), Expect = 1e-39 Identities = 96/207 (46%), Positives = 129/207 (62%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKT+LAKAVA + F ++ SE V F+G G+ VRDLF+ A++ P+ Sbjct: 188 GVLLHGPPGTGKTMLAKAVANQTDASFIKMAGSELVRKFIGEGSRLVRDLFELAEQKDPA 247 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DAV R S + E +T+ QLL+EMDGFD + ++AATNR LDSA Sbjct: 248 IIFIDEIDAVAAKRTDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDSA 307 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 + RPGRF R + V P+ + R +IL +H ++ + DS DL A+ T GA LA++ Sbjct: 308 ILRPGRFDRLIEVPNPNPDARERILEIHAGEMNV-ADSVDFSDLAAD-TAEFSGAQLASL 365 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R D V R+D DA E+ Sbjct: 366 ATEAGMFAIRDDRDEVHRQDFDDAYEK 392
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 161 bits (407), Expect = 2e-39 Identities = 85/205 (41%), Positives = 131/205 (63%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKTL+A+AVA E G FF ++ E + G + +R F+E ++ P+ Sbjct: 246 GILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPA 305 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 I+FIDE+DA+ R ++ + + ++QLLT MDG ++V+AATNRP ++D AL R Sbjct: 306 ILFIDEIDAIAPKREKTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRR 365 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 GRF R++ +G+PD GR +IL +H + + L +D ++ + +AN G VGADLA++ +E Sbjct: 366 FGRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDL--EQIANECHGFVGADLASLCSE 423 Query: 543 AALLAARRGGDIVAREDIMDAIERE 617 AAL R +++ ED D I+ E Sbjct: 424 AALQQIREKMELIDLED--DQIDAE 446 Score = 156 bits (395), Expect = 4e-38 Identities = 83/191 (43%), Positives = 113/191 (59%), Gaps = 4/191 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL GPPG GKTLLAKA+A E F S+ E + M+ G A VRD+F +A+ AAP Sbjct: 519 GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPC 578 Query: 183 IIFIDELDAV----GGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 350 ++F DELD++ GG G D+ +NQ+LTEMDG ++ V ++ ATNRP +D Sbjct: 579 VLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDP 638 Query: 351 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 530 A+ RPGR + +++ +PD R +IL LRK PL +D ++ +A T G GADL Sbjct: 639 AVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDL--TFLAKNTVGFSGADLTE 696 Query: 531 IVNEAALLAAR 563 I A LA R Sbjct: 697 ICQRACKLAIR 707
>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 160 bits (404), Expect = 4e-39 Identities = 93/207 (44%), Positives = 125/207 (60%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLA+AVA F VS SE V+ F+G GA VR+LF A+E APS Sbjct: 185 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS 244 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIF+DE+D++G SR G + E +T+ +LL ++DGF++ + V+ ATNR LDSA Sbjct: 245 IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSA 304 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ P+ E R IL +H RK+ L I +A + PG GA++ + Sbjct: 305 LLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG--INLRKIAELMPGASGAEVKGV 362 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R V +ED A+ + Sbjct: 363 CTEAGMYALRERRVHVTQEDFEMAVAK 389
>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding protein homolog 10) (TBP10) Length = 406 Score = 160 bits (404), Expect = 4e-39 Identities = 93/207 (44%), Positives = 125/207 (60%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLA+AVA F VS SE V+ F+G GA VR+LF A+E APS Sbjct: 185 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS 244 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIF+DE+D++G SR G + E +T+ +LL ++DGF++ + V+ ATNR LDSA Sbjct: 245 IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSA 304 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ P+ E R IL +H RK+ L I +A + PG GA++ + Sbjct: 305 LLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG--INLRKIAELMPGASGAEVKGV 362 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R V +ED A+ + Sbjct: 363 CTEAGMYALRERRVHVTQEDFEMAVAK 389
>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1) Length = 406 Score = 160 bits (404), Expect = 4e-39 Identities = 93/207 (44%), Positives = 125/207 (60%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLA+AVA F VS SE V+ F+G GA VR+LF A+E APS Sbjct: 185 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS 244 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIF+DE+D++G SR G + E +T+ +LL ++DGF++ + V+ ATNR LDSA Sbjct: 245 IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSA 304 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ P+ E R IL +H RK+ L I +A + PG GA++ + Sbjct: 305 LLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG--INLRKIAELMPGASGAEVKGV 362 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R V +ED A+ + Sbjct: 363 CTEAGMYALRERRVHVTQEDFEMAVAK 389
>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 160 bits (404), Expect = 4e-39 Identities = 93/207 (44%), Positives = 125/207 (60%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLA+AVA F VS SE V+ F+G GA VR+LF A+E APS Sbjct: 185 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS 244 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIF+DE+D++G SR G + E +T+ +LL ++DGF++ + V+ ATNR LDSA Sbjct: 245 IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSA 304 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ P+ E R IL +H RK+ L I +A + PG GA++ + Sbjct: 305 LLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG--INLRKIAELMPGASGAEVKGV 362 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R V +ED A+ + Sbjct: 363 CTEAGMYALRERRVHVTQEDFEMAVAK 389
>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) Length = 406 Score = 160 bits (404), Expect = 4e-39 Identities = 93/207 (44%), Positives = 125/207 (60%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLA+AVA F VS SE V+ F+G GA VR+LF A+E APS Sbjct: 185 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS 244 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIF+DE+D++G SR G + E +T+ +LL ++DGF++ + V+ ATNR LDSA Sbjct: 245 IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSA 304 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ P+ E R IL +H RK+ L I +A + PG GA++ + Sbjct: 305 LLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG--INLRKIAELMPGASGAEVKGV 362 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R V +ED A+ + Sbjct: 363 CTEAGMYALRERRVHVTQEDFEMAVAK 389
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 160 bits (404), Expect = 4e-39 Identities = 91/205 (44%), Positives = 125/205 (60%), Gaps = 3/205 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G L+ GPPGTGKTLLA+A A + F ++A + V+M++G GA VRD F AKE AP+ Sbjct: 217 GALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPT 276 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDELDA+G R +S + E +T+ +LL ++DGF SD +V V+AATNR LD A Sbjct: 277 IIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPA 336 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L R GR RK+ +P + R +IL +H RK+ ++D I +A T GA L + Sbjct: 337 LLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDD--INWQELARSTDEFNGAQLKAV 394 Query: 534 VNEAALLAARRGGDIVAREDIMDAI 608 EA ++A R G V ED ++ I Sbjct: 395 TVEAGMIALRNGQSSVKHEDFVEGI 419
>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase| Length = 1229 Score = 157 bits (398), Expect = 2e-38 Identities = 85/186 (45%), Positives = 115/186 (61%), Gaps = 5/186 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPG GKTLLAKA+A E F SV E + M+ G A VRDLF +A+ A+P Sbjct: 970 GILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPC 1029 Query: 183 IIFIDELDAVGGSR-GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 359 IIF DE+D++ R + ND D+ +NQ+LTE+DG + + ++AATNRP LD AL Sbjct: 1030 IIFFDEIDSLAKERNSNTNNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALT 1089 Query: 360 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI-- 533 RPGR + +++ +PDL+ R I L+ PL ED +I +A T G GAD+ N+ Sbjct: 1090 RPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVDI--HDMAKRTEGFSGADITNLCQ 1147 Query: 534 --VNEA 545 VNEA Sbjct: 1148 SAVNEA 1153 Score = 145 bits (367), Expect = 7e-35 Identities = 77/183 (42%), Positives = 115/183 (62%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ G PGTGKT +AKA+A E+ + ++ E + +G ++R +FK+A E P Sbjct: 563 GVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPC 622 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 IIFIDE+D++ R +S N+ + ++QLLT MDG + V+V+AATNRP ++D AL R Sbjct: 623 IIFIDEIDSIANKRSKSNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRR 682 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 GRF R++ + VPD +GR +IL +K+ L+ D + +A G VGADLA + E Sbjct: 683 FGRFDREIEIPVPDEQGRYEILLTKTKKMKLDPDVNL--RKIAKECHGYVGADLAQLCFE 740 Query: 543 AAL 551 AA+ Sbjct: 741 AAI 743
>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A| Length = 438 Score = 157 bits (397), Expect = 2e-38 Identities = 91/205 (44%), Positives = 129/205 (62%), Gaps = 3/205 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G L+ GPPGTGKTLLA+A A ++ F ++A + V+MF+G GA VRD F AKE +P+ Sbjct: 221 GCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPA 280 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDELDA+G R ++ + E +T+ +LL ++DGF SD +V V+AATNR LD A Sbjct: 281 IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPA 340 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L R GR RK+ +P+ E R IL +H RK+ +++D I + +A T GA L ++ Sbjct: 341 LLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDD--INWEELARSTDEYNGAMLKSV 398 Query: 534 VNEAALLAARRGGDIVAREDIMDAI 608 EA ++A R+G + E MD I Sbjct: 399 CVEAGMIALRQGDTKINHEHFMDGI 423
>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein| 10) (TBP-10) Length = 404 Score = 157 bits (396), Expect = 3e-38 Identities = 89/205 (43%), Positives = 124/205 (60%), Gaps = 3/205 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPGTGKTLLA+A A + F ++ + V+MF+G GA VRD F AKE APS Sbjct: 187 GVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPS 246 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDELDA+G R ++ + E +T+ +LL ++DGF +V V+AATNR LD A Sbjct: 247 IIFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPA 306 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L R GR RK+ +P+ E R +I+ +H RK+ + D + + +A T GA + Sbjct: 307 LLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPD--VNYEELARCTDDFNGAQCKAV 364 Query: 534 VNEAALLAARRGGDIVAREDIMDAI 608 EA ++A RRG + ED M+ I Sbjct: 365 CVEAGIIALRRGATELTHEDYMEGI 389
>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) Length = 439 Score = 156 bits (395), Expect = 4e-38 Identities = 89/205 (43%), Positives = 125/205 (60%), Gaps = 3/205 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPGTGKTLLA+A A + F ++ + V+MF+G GA VRD F AKE APS Sbjct: 222 GVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPS 281 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDELDA+G R ++ + E +T+ +LL ++DGF + +V V+AATNR LD A Sbjct: 282 IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPA 341 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L R GR RK+ +P+ E R +I+ +H RK+ + D + + +A T GA + Sbjct: 342 LLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPD--VNYEELARCTDDFNGAQCKAV 399 Query: 534 VNEAALLAARRGGDIVAREDIMDAI 608 EA ++A RRG + ED M+ I Sbjct: 400 CVEAGMIALRRGATELTHEDYMEGI 424
>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Proteasome subunit P50) Length = 439 Score = 156 bits (395), Expect = 4e-38 Identities = 89/205 (43%), Positives = 125/205 (60%), Gaps = 3/205 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPGTGKTLLA+A A + F ++ + V+MF+G GA VRD F AKE APS Sbjct: 222 GVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPS 281 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDELDA+G R ++ + E +T+ +LL ++DGF + +V V+AATNR LD A Sbjct: 282 IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPA 341 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L R GR RK+ +P+ E R +I+ +H RK+ + D + + +A T GA + Sbjct: 342 LLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPD--VNYEELARCTDDFNGAQCKAV 399 Query: 534 VNEAALLAARRGGDIVAREDIMDAI 608 EA ++A RRG + ED M+ I Sbjct: 400 CVEAGMIALRRGATELTHEDYMEGI 424
>PRS8_DROME (O18413) 26S protease regulatory subunit 8| Length = 405 Score = 156 bits (395), Expect = 4e-38 Identities = 91/207 (43%), Positives = 124/207 (59%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLA+AVA F VS SE V+ F+G G+ VR+LF A+E APS Sbjct: 184 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS 243 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIF+DE+D++G SR G + E +T+ +LL ++DGF++ + V+ ATNR LD A Sbjct: 244 IIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPA 303 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ P+ E R IL +H RK+ L I +A + PG GA++ + Sbjct: 304 LLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG--INLRKIAELMPGASGAEVKGV 361 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R V +ED A+ + Sbjct: 362 CTEAGMYALRERRVHVTQEDFEMAVAK 388
>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)| Length = 402 Score = 156 bits (395), Expect = 4e-38 Identities = 91/207 (43%), Positives = 124/207 (59%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLA+AVA F VS SE V+ F+G G+ VR+LF A+E APS Sbjct: 181 GVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPS 240 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIF+DE+D++G SR G + E +T+ +LL ++DGF++ + V+ ATNR LD A Sbjct: 241 IIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPA 300 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ P+ E R IL +H RK+ L I +A + PG GA++ + Sbjct: 301 LLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG--INLRKIAELMPGASGAEVKGV 358 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R V +ED A+ + Sbjct: 359 CTEAGMYALRERRVHVTQEDFEMAVAK 385
>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)| Length = 461 Score = 156 bits (394), Expect = 5e-38 Identities = 91/206 (44%), Positives = 123/206 (59%), Gaps = 2/206 (0%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLA+AVA F VS SE V+ F+G GA VR+LF A+E APS Sbjct: 180 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS 239 Query: 183 IIFIDELDAVGG--SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 356 IIF+DE+D++G G + E +T+ +LL ++DGF++ + V+ ATNR LDSAL Sbjct: 240 IIFMDEIDSIGSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSAL 299 Query: 357 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 536 RPGR RK+ P+ E R IL +H RK+ L I +A + PG GA++ + Sbjct: 300 LRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG--INLRKIAELMPGASGAEVKGVC 357 Query: 537 NEAALLAARRGGDIVAREDIMDAIER 614 EA + A R V +ED A+ + Sbjct: 358 TEAGMYALRERRVHVTQEDFEMAVAK 383
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 155 bits (392), Expect = 9e-38 Identities = 93/210 (44%), Positives = 126/210 (60%), Gaps = 3/210 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GV+L GPPGTGKTLLAKAVA + F V SE ++ ++G G VR+LF+ A+E APS Sbjct: 220 GVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 279 Query: 183 IIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+FIDE+DAVG R S + E +T+ +LL ++DGFDS V V+ ATNR + LD A Sbjct: 280 IVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPA 339 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ +PD + +R+I +H ++ L ED + ++A L GAD+ I Sbjct: 340 LIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAK--DDLSGADIKAI 397 Query: 534 VNEAALLAARRGGDIVAREDIMDAIEREKY 623 EA L+A R V ED + E Y Sbjct: 398 CTEAGLMALRERRMKVTNEDFKKSKESVLY 427
>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) Length = 442 Score = 155 bits (392), Expect = 9e-38 Identities = 89/205 (43%), Positives = 125/205 (60%), Gaps = 3/205 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPGTGKTLLA+A A + F ++ + V+MF+G GA VRD F AKE APS Sbjct: 225 GVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPS 284 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDELDA+G R ++ + E +T+ +LL ++DGF + +V V+AATNR LD A Sbjct: 285 IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPA 344 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L R GR RK+ +P+ E R +I+ +H RK+ + D + + +A T GA + Sbjct: 345 LLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPD--VNYEELARCTDDFNGAQSKAV 402 Query: 534 VNEAALLAARRGGDIVAREDIMDAI 608 EA ++A RRG + ED M+ I Sbjct: 403 CVEAGMIALRRGATELTHEDHMEGI 427
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 155 bits (392), Expect = 9e-38 Identities = 92/207 (44%), Positives = 125/207 (60%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTL+AKAVA + F ++ SE V F+G GA VRDLF+ A++ P+ Sbjct: 185 GVLLHGPPGTGKTLMAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARDHEPA 244 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 ++FIDE+DA+ R S + E +T+ QLL+EMDGFD + ++AATNR LD A Sbjct: 245 VVFIDEIDAIASKRTDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDRA 304 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 + RPGRF R + V P++ GR KI +H R + + DS +L A+ T L GAD+ I Sbjct: 305 ILRPGRFDRLIEVPHPNVGGREKIFRIHTRAMNV-ADSVDFGELAAD-TGDLSGADVKAI 362 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R V +D A E+ Sbjct: 363 CTEAGMFAIRDDRTEVRMQDFQSAREK 389
>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 981 Score = 154 bits (390), Expect = 2e-37 Identities = 89/191 (46%), Positives = 120/191 (62%), Gaps = 3/191 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKTLLAKAVA E + F SV E + M+VG+ VR++F A+ AAP Sbjct: 740 GLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPC 799 Query: 183 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 356 IIF DELD++ SRGRS + D+ ++QLL E+DG S V V+ ATNRP LD AL Sbjct: 800 IIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPAL 859 Query: 357 CRPGRFSRKVFVGV-PDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 RPGRF + VFVG D + ++L+ RK LE S + +++ P L GADL ++ Sbjct: 860 LRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEA-SVSLANVLDCCPPQLTGADLYSL 918 Query: 534 VNEAALLAARR 566 ++A + A +R Sbjct: 919 CSDAMMTALKR 929 Score = 52.8 bits (125), Expect = 8e-07 Identities = 48/188 (25%), Positives = 76/188 (40%), Gaps = 1/188 (0%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 185 VLL GPPG+GKT A G+ V S +++ F A+ P++ Sbjct: 467 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRPAV 526 Query: 186 IFIDELDAVGGSRGRSFNDER-DQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 + + +D +G R D R TL LL + D ++V+A T+R + L + + Sbjct: 527 LLLTAVDLLGRDRDGLGEDARVAATLRHLLLDEDALSRCPPLMVVATTSRVQDLPTDV-- 584 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 F ++ V V R IL +PL + E+ +A G V DL ++ Sbjct: 585 QTAFPHELEVPVLSEAQRLSILQALTAHLPLGQ--EVNLPQLARRCAGFVVGDLYALLTH 642 Query: 543 AALLAARR 566 A R Sbjct: 643 TCRAACTR 650
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 154 bits (389), Expect = 2e-37 Identities = 91/205 (44%), Positives = 122/205 (59%), Gaps = 3/205 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTL+A+A A + F ++ + V+MF+G GA VRD F+ AKE AP Sbjct: 207 GVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPC 266 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DA+G R S + E +T+ +LL ++DGF SD ++ V+AATNR LD A Sbjct: 267 IIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPA 326 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L R GR RK+ P E R +IL +H RK+ + D + + +A T GA L + Sbjct: 327 LMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPD--VNFEELARSTDDFNGAQLKAV 384 Query: 534 VNEAALLAARRGGDIVAREDIMDAI 608 EA +LA RR V ED + I Sbjct: 385 CVEAGMLALRRDATEVNHEDFNEGI 409
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 154 bits (389), Expect = 2e-37 Identities = 90/205 (43%), Positives = 122/205 (59%), Gaps = 3/205 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTL+A+A A + F ++ + V+MF+G GA VRD F+ AKE +P Sbjct: 212 GVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPC 271 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DA+G R S + E +T+ +LL ++DGF SD ++ V+AATNR LD A Sbjct: 272 IIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPA 331 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L R GR RK+ P E R +IL +H RK+ + D + + +A T GA L + Sbjct: 332 LMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPD--VNFEELARSTDDFNGAQLKAV 389 Query: 534 VNEAALLAARRGGDIVAREDIMDAI 608 EA +LA RR V ED + I Sbjct: 390 CVEAGMLALRRDATEVTHEDFNEGI 414
>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 978 Score = 154 bits (389), Expect = 2e-37 Identities = 89/191 (46%), Positives = 120/191 (62%), Gaps = 3/191 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKTLLAKAVA E + F SV E + M+VG+ VR++F A+ AAP Sbjct: 737 GLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPC 796 Query: 183 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 356 IIF DELD++ SRGRS + D+ ++QLL E+DG S V V+ ATNRP LD AL Sbjct: 797 IIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPAL 856 Query: 357 CRPGRFSRKVFVGV-PDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 RPGRF + VFVG D + ++L+ RK LE S + +++ P L GADL ++ Sbjct: 857 LRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEA-SVSLMNVLDCCPPQLTGADLYSL 915 Query: 534 VNEAALLAARR 566 ++A + A +R Sbjct: 916 CSDAMMTALKR 926 Score = 53.9 bits (128), Expect = 4e-07 Identities = 49/188 (26%), Positives = 77/188 (40%), Gaps = 1/188 (0%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 185 VLL GPPG+GKT A G+ V S +++ F A+ P + Sbjct: 466 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVV 525 Query: 186 IFIDELDAVGGSRGRSFNDER-DQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 + + LD +G R D R TL LL + D ++V+A T+R + L + + Sbjct: 526 LLLTALDLLGRDRDGLGEDARVVATLRHLLLDEDPLSRCPPLMVVATTSRVQDLPTDV-- 583 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 F ++ V V R +L +PL + E+ +A G V DL ++ Sbjct: 584 RTAFPHELEVPVLSESQRLSVLQALTAHLPLGQ--EVNLSQLARRCAGFVVGDLYALLTH 641 Query: 543 AALLAARR 566 A+ A R Sbjct: 642 ASRAACTR 649
>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 980 Score = 154 bits (388), Expect = 3e-37 Identities = 88/191 (46%), Positives = 119/191 (62%), Gaps = 3/191 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKTLLAKAVA E + F SV E + M+VG+ VR++F A+ AAP Sbjct: 739 GLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPC 798 Query: 183 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 356 IIF DELD++ SRGRS + D+ ++QLL E+DG S V V+ ATNRP LD AL Sbjct: 799 IIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPAL 858 Query: 357 CRPGRFSRKVFVGV-PDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 RPGRF + VFVG D + ++L+ RK LE ++ +++ P L GADL ++ Sbjct: 859 LRPGRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLV-NVLDCCPPQLTGADLYSL 917 Query: 534 VNEAALLAARR 566 ++A A +R Sbjct: 918 CSDAMTAALKR 928 Score = 55.1 bits (131), Expect = 2e-07 Identities = 48/188 (25%), Positives = 79/188 (42%), Gaps = 1/188 (0%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 185 VLL GPPG GKT + A G+ V S G +++ +F A+ P++ Sbjct: 466 VLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAV 525 Query: 186 IFIDELDAVGGSRGRSFNDERDQ-TLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 + + +D +G R D R L LL D +S ++V+A T+R + L + + Sbjct: 526 LLLTAVDLLGRDRDGLGEDARVMAVLRHLLLNEDPLNSCPPLMVVATTSRAQDLPADV-- 583 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 F ++ V R IL +PL + E+ +A G V DL ++ Sbjct: 584 QTAFPHELEVPALSEGQRLSILRALTAHLPLGQ--EVNLAQLARRCAGFVVGDLYALLTH 641 Query: 543 AALLAARR 566 ++ A R Sbjct: 642 SSRAACTR 649
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 154 bits (388), Expect = 3e-37 Identities = 90/210 (42%), Positives = 125/210 (59%), Gaps = 3/210 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GV+L GPPGTGKTLLAKAVA + F V SE ++ ++G G VR+LF+ A+E APS Sbjct: 221 GVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 280 Query: 183 IIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+FIDE+DA+G R S + E +T+ +LL ++DGFDS V V+ ATNR + LD A Sbjct: 281 IVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPA 340 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ +PD + +++I +H ++ L +D + D + L GAD+ I Sbjct: 341 LIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADD--VTLDDLIMAKDDLSGADIKAI 398 Query: 534 VNEAALLAARRGGDIVAREDIMDAIEREKY 623 EA L+A R V ED + E Y Sbjct: 399 CTEAGLMALRERRMKVTNEDFKKSKENVLY 428
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 154 bits (388), Expect = 3e-37 Identities = 90/210 (42%), Positives = 125/210 (59%), Gaps = 3/210 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GV+L GPPGTGKTLLAKAVA + F V SE ++ ++G G VR+LF+ A+E APS Sbjct: 221 GVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 280 Query: 183 IIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+FIDE+DA+G R S + E +T+ +LL ++DGFDS V V+ ATNR + LD A Sbjct: 281 IVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPA 340 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ +PD + +++I +H ++ L +D + D + L GAD+ I Sbjct: 341 LIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADD--VTLDDLIMAKDDLSGADIKAI 398 Query: 534 VNEAALLAARRGGDIVAREDIMDAIEREKY 623 EA L+A R V ED + E Y Sbjct: 399 CTEAGLMALRERRMKVTNEDFKKSKENVLY 428
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 154 bits (388), Expect = 3e-37 Identities = 90/210 (42%), Positives = 125/210 (59%), Gaps = 3/210 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GV+L GPPGTGKTLLAKAVA + F V SE ++ ++G G VR+LF+ A+E APS Sbjct: 221 GVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 280 Query: 183 IIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+FIDE+DA+G R S + E +T+ +LL ++DGFDS V V+ ATNR + LD A Sbjct: 281 IVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPA 340 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ +PD + +++I +H ++ L +D + D + L GAD+ I Sbjct: 341 LIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADD--VTLDDLIMAKDDLSGADIKAI 398 Query: 534 VNEAALLAARRGGDIVAREDIMDAIEREKY 623 EA L+A R V ED + E Y Sbjct: 399 CTEAGLMALRERRMKVTNEDFKKSKENVLY 428
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 153 bits (387), Expect = 4e-37 Identities = 90/207 (43%), Positives = 120/207 (57%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GV+L G PGTGKTLLAKAVA + F + SE ++ ++G G R +FK A E APS Sbjct: 218 GVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPS 277 Query: 183 IIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+FIDE+DA+G R S + E +T+ +LL ++DGFD V V+ ATN+ + LD A Sbjct: 278 IVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPA 337 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ PDL ++KIL +H K+ L ED + + + L GAD+ + Sbjct: 338 LIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNL--ETLVTTKDDLSGADIQAM 395 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA LLA R V ED A ER Sbjct: 396 CTEAGLLALRERRMQVTAEDFKQAKER 422
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 153 bits (387), Expect = 4e-37 Identities = 90/205 (43%), Positives = 122/205 (59%), Gaps = 3/205 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTL+A+A A + F ++ + V+MF+G GA VRD F+ AKE +P Sbjct: 206 GVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPC 265 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DA+G R S + E +T+ +LL ++DGF SD ++ V+AATNR LD A Sbjct: 266 IIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPA 325 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L R GR RK+ P E R +IL +H RK+ + D + + +A T GA L + Sbjct: 326 LMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVNPD--VNFEELARSTDDFNGAQLKAV 383 Query: 534 VNEAALLAARRGGDIVAREDIMDAI 608 EA +LA RR V ED + I Sbjct: 384 CVEAGMLALRRDATEVTHEDFNEGI 408
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 153 bits (387), Expect = 4e-37 Identities = 88/208 (42%), Positives = 123/208 (59%), Gaps = 4/208 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKTLLA+AVA F VS SE V+ ++G G+ VR+LF A+E APS Sbjct: 181 GILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS 240 Query: 183 IIFIDELDAVGGSR----GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 350 IIF+DE+D++G SR G S + E +T+ +LL ++DGF++ + V+ ATNR LD Sbjct: 241 IIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDP 300 Query: 351 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 530 AL RPGR RK+ P E R +IL +H R + L ++ +A G GA+L Sbjct: 301 ALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDL--KSIAEKMNGASGAELKG 358 Query: 531 IVNEAALLAARRGGDIVAREDIMDAIER 614 + EA + A R V +ED A+ + Sbjct: 359 VCTEAGMFALRERRVHVTQEDFELAVAK 386
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 153 bits (386), Expect = 5e-37 Identities = 93/209 (44%), Positives = 126/209 (60%), Gaps = 6/209 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LLAGPPG GKTLLAKAVA E+G+ F SV E + M+VG VR +F+ AK +AP Sbjct: 616 GILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPC 675 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 +IF DE+DA+ R + +NQLLTEMDG ++ +V ++AATNRP +D A+ R Sbjct: 676 VIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILR 735 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLR---KVPLEED---SEIICDLVANVTPGLVGADL 524 PGR + +FVG+P R IL + K PL+ED I DL N GADL Sbjct: 736 PGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVNLETIANDLRCNC---YTGADL 792 Query: 525 ANIVNEAALLAARRGGDIVAREDIMDAIE 611 +V EA+L A R+ +I A+++ + A E Sbjct: 793 TALVREASLCALRQ--EITAQKNGVGAGE 819 Score = 149 bits (376), Expect = 7e-36 Identities = 88/191 (46%), Positives = 116/191 (60%), Gaps = 3/191 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPG GKTLLA A+AGE +P V+A E V G ++R+LF +A AP Sbjct: 299 GVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPC 358 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFD---SDVKVIVMAATNRPKALDSA 353 I+FIDE+DA+ R + D + + QLLT MD + + +V+V+ ATNRP +LD A Sbjct: 359 IVFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPA 418 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L R GRF R+V +G+PD R +IL RK+ L E C L A++TPG VGADL + Sbjct: 419 LRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFN-FCHL-AHLTPGFVGADLMAL 476 Query: 534 VNEAALLAARR 566 EAA+ A R Sbjct: 477 CREAAMCAVNR 487
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 152 bits (384), Expect = 8e-37 Identities = 89/210 (42%), Positives = 124/210 (59%), Gaps = 3/210 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GV+L GPPGTGKTLLAKAVA + F V SE ++ ++G G VR+LF+ A+E PS Sbjct: 221 GVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPS 280 Query: 183 IIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+FIDE+DA+G R S + E +T+ +LL ++DGFDS V V+ ATNR + LD A Sbjct: 281 IVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPA 340 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ +PD + +++I +H ++ L +D + D + L GAD+ I Sbjct: 341 LIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADD--VTLDELIMAKDDLSGADIKAI 398 Query: 534 VNEAALLAARRGGDIVAREDIMDAIEREKY 623 EA L+A R V ED + E Y Sbjct: 399 CTEAGLMALRERRMKVTNEDFKKSKENFLY 428
>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein| homolog 10) (Fragment) Length = 389 Score = 151 bits (382), Expect = 1e-36 Identities = 90/208 (43%), Positives = 123/208 (59%), Gaps = 4/208 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLA+AVA F VS SE V+ ++G G+ VR+LF A+E APS Sbjct: 167 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPS 226 Query: 183 IIFIDELDAVGGSRGRS----FNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 350 IIF+DE+D++G SRG S + E +T+ +LL ++DGF+S + V+ TNR LD Sbjct: 227 IIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDP 286 Query: 351 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 530 AL RPGR RK+ P GR IL +H RK+ L I +++ G GA+L Sbjct: 287 ALLRPGRIDRKIEFPNPGDAGRLDILKIHSRKMNLTRG--INLKKISDKMNGASGAELKA 344 Query: 531 IVNEAALLAARRGGDIVAREDIMDAIER 614 + EA + A R V++ED A+ + Sbjct: 345 VCTEAGMYALRERRVHVSQEDFEMAVSK 372
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 151 bits (381), Expect = 2e-36 Identities = 90/205 (43%), Positives = 121/205 (59%), Gaps = 3/205 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTL+A+A A + F ++ + V+MF+G GA VRD F AKE +P Sbjct: 202 GVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPC 261 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DA+G R S + E +T+ +LL ++DGF SD ++ V+AATNR LD A Sbjct: 262 IIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPA 321 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L R GR RK+ P E R +IL +H RK+ + D + + +A T GA L + Sbjct: 322 LMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNAD--VNFEELARSTDDFNGAQLKAV 379 Query: 534 VNEAALLAARRGGDIVAREDIMDAI 608 EA +LA RR V ED + I Sbjct: 380 CVEAGMLALRRDATEVNHEDFNEGI 404
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 150 bits (379), Expect = 3e-36 Identities = 87/198 (43%), Positives = 117/198 (59%), Gaps = 10/198 (5%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLLAGPPG GKTLLAKAVA E+G+ F SV E + M+VG VR +F+ AK +AP Sbjct: 617 GVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPC 676 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 +IF DE+DA+ R + +NQLLTEMDG ++ +V +MAATNRP +D A+ R Sbjct: 677 VIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILR 736 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLR---KVPLEED-------SEIICDLVANVTPGLV 512 PGR + +FVG+P R IL + K PL+ D ++ CD Sbjct: 737 PGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDC-------YT 789 Query: 513 GADLANIVNEAALLAARR 566 GADL+ +V EA++ A R+ Sbjct: 790 GADLSALVREASICALRQ 807 Score = 149 bits (376), Expect = 7e-36 Identities = 87/191 (45%), Positives = 118/191 (61%), Gaps = 3/191 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPG GKTLLA A+AGE +P V+A E V G ++R+LF++A AP Sbjct: 300 GVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPC 359 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFD---SDVKVIVMAATNRPKALDSA 353 IIFIDE+DA+ R + D + + QLLT MD + + +V+V+ ATNRP +LD A Sbjct: 360 IIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPA 419 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L R GRF R++ +G+PD R +IL RK+ L + + C L A++TPG VGADL + Sbjct: 420 LRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFD-FCHL-AHLTPGFVGADLMAL 477 Query: 534 VNEAALLAARR 566 EAA+ A R Sbjct: 478 CREAAMCAVNR 488
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 149 bits (377), Expect = 5e-36 Identities = 89/207 (42%), Positives = 121/207 (58%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GV+L G PGTGKTLLAKAVA F V SE ++ ++G G VR+LF+ A E +PS Sbjct: 229 GVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPS 288 Query: 183 IIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+FIDE+DAVG R + + E +T+ +LL ++DGFDS V V+ ATNR ++LD A Sbjct: 289 IVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPA 348 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ +PD++ RR+I +H K+ L +D + + GAD+ I Sbjct: 349 LLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLADDVNL--EEFVMTKDEFSGADIKAI 406 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA LLA R V D A E+ Sbjct: 407 CTEAGLLALRERRMKVTHADFKKAKEK 433
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 149 bits (376), Expect = 7e-36 Identities = 84/191 (43%), Positives = 116/191 (60%), Gaps = 4/191 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPG KT LAKA A A FFS+S +E M+VG G A +R+ F+ A+ A+PS Sbjct: 322 GILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPS 381 Query: 183 IIFIDELDAVGGSRGRSFNDER----DQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 350 IIF DE D V RG + ++ L+ LLTEMDG + ++V+AATNRP A+D+ Sbjct: 382 IIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDA 441 Query: 351 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 530 AL RPGRF ++V PDLE R +IL VH R + L +D ++ +A T GA+L Sbjct: 442 ALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDL--RKIAEETDLFTGAELEG 499 Query: 531 IVNEAALLAAR 563 + E+ ++ R Sbjct: 500 LCRESGTVSLR 510 Score = 106 bits (265), Expect = 5e-23 Identities = 75/198 (37%), Positives = 102/198 (51%), Gaps = 7/198 (3%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA-- 176 G+LL GPPGTGKT L +AV E +S G +R+ F EA A Sbjct: 58 GLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVS 117 Query: 177 --PSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDG---FDSDVKVIVMAATNRPKA 341 PS+IFIDE+D + R ++ + +QL T MD S +V+V+A+TNR A Sbjct: 118 DKPSVIFIDEIDVLCPRRDAR-REQDVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDA 176 Query: 342 LDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGAD 521 +D AL R GRF V V P+ E R KIL ++ +KV L D + +A G VGAD Sbjct: 177 IDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNL--DPSVDLQAIAISCNGYVGAD 234 Query: 522 LANIVNEAALLAARRGGD 575 L + EA + A++R D Sbjct: 235 LEALCREATISASKRSSD 252
>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4| Length = 443 Score = 148 bits (374), Expect = 1e-35 Identities = 89/210 (42%), Positives = 123/210 (58%), Gaps = 3/210 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GV+L G PGTGKTLLAKAVA + F + SE ++ ++G G VR+LF+ A+E APS Sbjct: 224 GVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPS 283 Query: 183 IIFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+FIDE+DAVG R S + E +T+ +LL ++DGFDS V V+ ATNR ++LD A Sbjct: 284 IVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPA 343 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ +PD + +R+I +H ++ L E+ + L GAD+ + Sbjct: 344 LIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTL--GKEVNLEEFITAKDELSGADIKAM 401 Query: 534 VNEAALLAARRGGDIVAREDIMDAIEREKY 623 EA LLA R V ED + E Y Sbjct: 402 CTEAGLLALRERRMRVTMEDFQKSKENVLY 431
>AFG2_YEAST (P32794) Protein AFG2| Length = 780 Score = 147 bits (371), Expect = 3e-35 Identities = 82/196 (41%), Positives = 114/196 (58%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPG KTL AKA+A E+GI F +V E +VG +R++F++A+ AAPS Sbjct: 552 GVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPS 611 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 IIF DE+DA+ R S + L LL E+DG + V+++AATNRP +D+AL R Sbjct: 612 IIFFDEIDALSPDRDGSSTSAANHVLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLR 671 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 PGR R ++VG PD+ R +IL +K EE + +L A+ T G GA++ + E Sbjct: 672 PGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHEL-ADRTEGYSGAEVVLLCQE 730 Query: 543 AALLAARRGGDIVARE 590 A L A D+ E Sbjct: 731 AGLAAIMEDLDVAKVE 746 Score = 142 bits (358), Expect = 8e-34 Identities = 78/193 (40%), Positives = 118/193 (61%), Gaps = 4/193 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKT+L + VA + +++ V ++G A +RD+F EA++ PS Sbjct: 281 GILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPS 340 Query: 183 IIFIDELDAVGGSRGRSFNDE-RDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 359 IIFIDE+D++ +R + E + + LLT MDG + KV+V+AATNRP ++D AL Sbjct: 341 IIFIDEIDSIAPNRANDDSGEVESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALR 400 Query: 360 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE---DSEIICDLVANVTPGLVGADLAN 530 RPGRF ++V +G+PD++ R IL ++ + DSE I +A+ T G VGADL Sbjct: 401 RPGRFDQEVEIGIPDVDARFDILTKQFSRMSSDRHVLDSEAI-KYIASKTHGYVGADLTA 459 Query: 531 IVNEAALLAARRG 569 + E+ + +RG Sbjct: 460 LCRESVMKTIQRG 472
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 147 bits (370), Expect = 3e-35 Identities = 87/205 (42%), Positives = 121/205 (59%), Gaps = 3/205 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GV+L GPPGTGKTLLA+AVA F VS +E V+ ++G G+ VR+LF A+E APS Sbjct: 184 GVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPS 243 Query: 183 IIFIDELDAVGGSR--GRSFND-ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIF+DE+D++G +R G D E +T+ +LL ++DGF++ + ++ ATNR LD A Sbjct: 244 IIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPA 303 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ P + R +IL +H RK+ L I VA G GAD+ + Sbjct: 304 LLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRG--INLRKVAEKMNGCSGADVKGV 361 Query: 534 VNEAALLAARRGGDIVAREDIMDAI 608 EA + A R V +ED A+ Sbjct: 362 CTEAGMYALRERRIHVTQEDFELAV 386
>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)| (TBP-7) Length = 418 Score = 147 bits (370), Expect = 3e-35 Identities = 90/204 (44%), Positives = 120/204 (58%), Gaps = 3/204 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPG GKT+LAKAVA F V SEFV+ ++G G VRD+F+ AKE AP+ Sbjct: 201 GVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPA 260 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DA+ R + E + L +LL +MDGFD +V V V+ ATNR LD A Sbjct: 261 IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPA 320 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ +PD +R I + K+ L E+ ++ D VA + GAD+ +I Sbjct: 321 LLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLE-DYVAR-PDKISGADINSI 378 Query: 534 VNEAALLAARRGGDIVAREDIMDA 605 E+ +LA R IV +D A Sbjct: 379 CQESGMLAVRENRYIVLAKDFEKA 402
>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) Length = 418 Score = 147 bits (370), Expect = 3e-35 Identities = 90/204 (44%), Positives = 120/204 (58%), Gaps = 3/204 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPG GKT+LAKAVA F V SEFV+ ++G G VRD+F+ AKE AP+ Sbjct: 201 GVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPA 260 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DA+ R + E + L +LL +MDGFD +V V V+ ATNR LD A Sbjct: 261 IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPA 320 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ +PD +R I + K+ L E+ ++ D VA + GAD+ +I Sbjct: 321 LLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLE-DYVAR-PDKISGADINSI 378 Query: 534 VNEAALLAARRGGDIVAREDIMDA 605 E+ +LA R IV +D A Sbjct: 379 CQESGMLAVRENRYIVLAKDFEKA 402
>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)| Length = 448 Score = 147 bits (370), Expect = 3e-35 Identities = 91/210 (43%), Positives = 122/210 (58%), Gaps = 6/210 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GV+L G PGTGKTLLAKAVA + F V SE ++ ++G G VR LF A+E +PS Sbjct: 227 GVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPS 286 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDS---DVKVIVMAATNRPKAL 344 I+FIDE+DA+G R E +T+ +LL ++DGFD+ D+KVI+ ATNR L Sbjct: 287 IVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIM--ATNRISDL 344 Query: 345 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 524 D AL RPGR RK+ PD +RKI +H K+ L ED + + + L GA++ Sbjct: 345 DPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNL--EELIQCKDDLSGAEI 402 Query: 525 ANIVNEAALLAARRGGDIVAREDIMDAIER 614 IV+EA LLA R V +D A E+ Sbjct: 403 KAIVSEAGLLALRERRMRVVMDDFRQAREK 432
>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)| (TAT-binding homolog 2) Length = 428 Score = 146 bits (368), Expect = 6e-35 Identities = 89/205 (43%), Positives = 123/205 (60%), Gaps = 4/205 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKT+L KAVA F V+ SEFV ++G G VRD+F+ A+E APS Sbjct: 208 GVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPS 267 Query: 183 IIFIDELDAVGGSR--GRSFND-ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+D++ R ++ +D E + L +LLT+MDGFD V V+ ATNR LD A Sbjct: 268 IIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPA 327 Query: 354 LCRPGRFSRKV-FVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 530 L RPGR RK+ F + D RR I K+ L ++++ ++ N L GA +A Sbjct: 328 LLRPGRLDRKIEFPYLRDRRERRLIFGTIASKMSLAPEADLDSLIIRN--DSLSGAVIAA 385 Query: 531 IVNEAALLAARRGGDIVAREDIMDA 605 I+ EA L A R+ ++ + D+ +A Sbjct: 386 IMQEAGLRAVRKNRYVILQSDLEEA 410
>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog| Length = 389 Score = 145 bits (365), Expect = 1e-34 Identities = 89/208 (42%), Positives = 116/208 (55%), Gaps = 4/208 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKT+L KAVA F V SEFV+ ++G G VRD+F+ A+E AP+ Sbjct: 170 GVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPA 229 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DA+ R + E + L +LLT+MDGFD V V+ ATNR LD A Sbjct: 230 IIFIDEIDAIATKRFDAQTGADREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPA 289 Query: 354 LCRPGRFSRKV-FVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 530 L RPGR RK+ F D RR + K+ L E+ D GA +A Sbjct: 290 LLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLL--SPEVDLDTFIMRPDASSGAQIAA 347 Query: 531 IVNEAALLAARRGGDIVAREDIMDAIER 614 I+ +A LLA R+ ++ + DI +A R Sbjct: 348 IMQDAGLLAVRKSRGVILQSDIEEAYAR 375
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 144 bits (363), Expect = 2e-34 Identities = 86/204 (42%), Positives = 118/204 (57%), Gaps = 3/204 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPG GKT+LAKAVA F V SEFV+ ++G G VRD+F+ AKE +PS Sbjct: 197 GVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPS 256 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DA+ R + E + L +LL +MDGFD V V+ ATNR LD A Sbjct: 257 IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPA 316 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ +PD +R + + ++ L +D ++ D VA + GAD+ +I Sbjct: 317 LLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLE-DWVAR-PDKISGADINSI 374 Query: 534 VNEAALLAARRGGDIVAREDIMDA 605 EA + A R +V +D+ A Sbjct: 375 CQEAGMQAVRENRYVVLTKDLEKA 398
>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)| Length = 820 Score = 144 bits (363), Expect = 2e-34 Identities = 89/218 (40%), Positives = 126/218 (57%), Gaps = 10/218 (4%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+L GPPG GKT LA A+A EAG+PF+ +SA+E + G +R+LF +A APS Sbjct: 269 GILFHGPPGCGKTKLANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPS 328 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDG----------FDSDVKVIVMAATNR 332 I+FIDE+DA+G R + + + QLLT MDG S V+V+ ATNR Sbjct: 329 IVFIDEIDAIGSKRENQQREMEKRIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNR 388 Query: 333 PKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLV 512 P ALD AL R GRF ++ + PD + R +IL+V +K+ LE + +A +TPG V Sbjct: 389 PDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFD--KKRIARLTPGFV 446 Query: 513 GADLANIVNEAALLAARRGGDIVAREDIMDAIEREKYG 626 GADL ++ A LA R+ A + I+D+ + E+ G Sbjct: 447 GADLESV----AYLAGRK-----AIKRILDSRKSEQSG 475 Score = 138 bits (347), Expect = 2e-32 Identities = 79/202 (39%), Positives = 113/202 (55%), Gaps = 2/202 (0%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G LL GPPG GKTL+AKA A EAG F + +E + +VG +R LF+ A+ AP Sbjct: 564 GFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPC 623 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 +IF DE+DA+ SRG+ ++ LNQ L E+DG + V V+ ATNRP +D A R Sbjct: 624 VIFFDEVDALTTSRGKEGAWVVERLLNQFLVELDGGERR-NVYVIGATNRPDVVDPAFLR 682 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 PGRF ++V +P+ + R IL RK P++ + + + N G GADLA++V + Sbjct: 683 PGRFGNLLYVPLPNADERASILKAIARKKPIDPSVD-LDGIAKNNCEGFSGADLAHLVQK 741 Query: 543 AALLAARR--GGDIVAREDIMD 602 A A G + +D+ D Sbjct: 742 ATFQAVEEMIGSSESSEDDVTD 763
>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding| protein homolog) Length = 414 Score = 144 bits (362), Expect = 3e-34 Identities = 85/208 (40%), Positives = 124/208 (59%), Gaps = 4/208 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GV++ GPPGTGKTLLA+AVA F VS SE V+ ++G G+ VR+LF A+E APS Sbjct: 192 GVIMYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPS 251 Query: 183 IIFIDELDAVGGSR---GRSFND-ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 350 IIF+DE+D++G +R G+ D E +T+ +LL ++DGF+S + ++ ATNR LD Sbjct: 252 IIFMDEIDSIGSTRTEGGKGGGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDP 311 Query: 351 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 530 AL RPGR RK+ P+ R IL +H R++ L I +A++ G GA++ Sbjct: 312 ALLRPGRIDRKIEFPNPNELARLDILKIHSRRMNLTRG--INLRKIASMLGGASGAEIKA 369 Query: 531 IVNEAALLAARRGGDIVAREDIMDAIER 614 EA + A R V +ED+ A+ + Sbjct: 370 TCTEAGMFALRERRVHVTQEDLEMAVAK 397
>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (CIP21) Length = 418 Score = 144 bits (362), Expect = 3e-34 Identities = 89/204 (43%), Positives = 118/204 (57%), Gaps = 3/204 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPG GKT+LAKAVA F V SEFV+ ++G G VRD+F+ AKE AP+ Sbjct: 201 GVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPA 260 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DA+ R + E + L +LL +MDGFD +V V V+ ATNR LD A Sbjct: 261 IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPA 320 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ +PD +R I + K+ L E+ ++ D VA + GAD+ +I Sbjct: 321 LLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLE-DYVAR-PDKISGADINSI 378 Query: 534 VNEAALLAARRGGDIVAREDIMDA 605 +LA R IV +D A Sbjct: 379 CQARGMLAVRETAYIVLAKDFEKA 402
>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome| AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3) Length = 408 Score = 143 bits (361), Expect = 4e-34 Identities = 86/200 (43%), Positives = 119/200 (59%), Gaps = 3/200 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKT+LAKAVA F V SEFV+ ++G G VRD+F+ AKE AP+ Sbjct: 191 GVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPA 250 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DA+ +R + E + L +LL +MDGFD V V V+ ATNR LD A Sbjct: 251 IIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPA 310 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ +PD +R + V K+ L ++ ++ D V+ + A++A I Sbjct: 311 LLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLE-DYVSR-PDKISAAEIAAI 368 Query: 534 VNEAALLAARRGGDIVARED 593 EA + A R+ ++ +D Sbjct: 369 CQEAGMHAVRKNRYVILPKD 388
>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog| Length = 423 Score = 142 bits (359), Expect = 6e-34 Identities = 89/206 (43%), Positives = 121/206 (58%), Gaps = 5/206 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKT+L KAVA F V+ SEFV+ ++G G VRD+F+ A+E +P+ Sbjct: 202 GVLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPA 261 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DA+ R + E + L +LL +MDGF+ V V+ ATNR LD A Sbjct: 262 IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFEQSSNVKVIMATNRADTLDPA 321 Query: 354 LCRPGRFSRKV-FVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 530 L RPGR RK+ F + D RR I + K+ L + ++ +V N L GA +A Sbjct: 322 LLRPGRLDRKIEFPSLRDRRERRLIFSTIASKMSLSPEVDLDSLIVRN--EPLSGAVIAA 379 Query: 531 IVNEAALLAARRGG-DIVAREDIMDA 605 I+ EA L A R+ +I+ R D+ DA Sbjct: 380 IMQEAGLRAVRKNRYNIIPRSDLEDA 405
>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog| Length = 387 Score = 142 bits (359), Expect = 6e-34 Identities = 87/207 (42%), Positives = 118/207 (57%), Gaps = 3/207 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKT+L KAVA F V+ SEFV+ ++G G VRD+F+ A+E APS Sbjct: 170 GVLLYGPPGTGKTMLVKAVANHTKATFIRVNGSEFVQKYLGEGPRMVRDVFRLAREKAPS 229 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 I+FIDE+D++ R S + E + L +LL +MDGFD V V+ ATNR +D A Sbjct: 230 IVFIDEVDSIATKRFDASTSADREVQRVLIELLNQMDGFDPAANVKVIMATNRADTIDPA 289 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ +PD +R + K+ L DS I LV + AD+ +I Sbjct: 290 LLRPGRLDRKIEFPLPDRRQKRLVFNAITSKMSL-NDSVDIESLVCR-PEKISCADINSI 347 Query: 534 VNEAALLAARRGGDIVAREDIMDAIER 614 EA +LA R +V + D +A + Sbjct: 348 CQEAGMLAVRASRYMVTQRDFEEAYSK 374
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 142 bits (359), Expect = 6e-34 Identities = 86/200 (43%), Positives = 119/200 (59%), Gaps = 3/200 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKT+LAKAVA F V SEFV+ ++G G VRD+F+ A+E +P+ Sbjct: 186 GVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPA 245 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DA+ R + E + L +LL +MDGFD V V V+ ATNR LD A Sbjct: 246 IIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPA 305 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ +PD +R I V K+ L ++ ++ D V+ L GA++ +I Sbjct: 306 LLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLE-DYVSR-PDKLSGAEIQSI 363 Query: 534 VNEAALLAARRGGDIVARED 593 EA + A R+ ++ +D Sbjct: 364 CQEAGMHAIRKNRYVILPKD 383
>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS8) Length = 1030 Score = 142 bits (358), Expect = 8e-34 Identities = 81/200 (40%), Positives = 120/200 (60%), Gaps = 4/200 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+L GPPGTGKTL+AKA+A + FFSV E + M++G A VR +F++A+EA P Sbjct: 767 GILFYGPPGTGKTLMAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKAREAKPC 826 Query: 183 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVK-VIVMAATNRPKALDSA 353 +IF DE+D+V RG + D+ ++QLL E+DG +D V V+ ATNRP LD A Sbjct: 827 VIFFDEIDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSTDADGVFVIGATNRPDLLDEA 886 Query: 354 LCRPGRFSRKVFVGVPDLEGRR-KILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 530 L RPGRF + +++G+PD + ++ IL RK L+ D ++I +L GAD Sbjct: 887 LLRPGRFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLI-ELAKLCPFNYTGADFYA 945 Query: 531 IVNEAALLAARRGGDIVARE 590 + ++A L A R +V ++ Sbjct: 946 LCSDAMLNAMSRIARMVEKK 965
>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein| 6) (TBP-6) Length = 405 Score = 142 bits (357), Expect = 1e-33 Identities = 82/192 (42%), Positives = 117/192 (60%), Gaps = 3/192 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPGTGKTLLA+A A + F ++ + V+MF+G GA VRD F AKE APS Sbjct: 206 GVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPS 265 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDELDA+G R ++ + E +T+ +LL ++DGF +++V V+AATNR LD A Sbjct: 266 IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPA 325 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L R GR RK+ +P+ E R +I+ +H RK+ + D + + +A + Sbjct: 326 LLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPD--VNYEELARCPTISMALSAKQF 383 Query: 534 VNEAALLAARRG 569 EA ++A RRG Sbjct: 384 GVEAGMIALRRG 395
>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 948 Score = 141 bits (355), Expect = 2e-33 Identities = 77/192 (40%), Positives = 118/192 (61%), Gaps = 4/192 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKTLLAKAVA E + F S+ E + M+VG A VR++F++A+ ++P Sbjct: 690 GVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPC 749 Query: 183 IIFIDELDAVGGSRGRSFN--DERDQTLNQLLTEMDGF--DSDVKVIVMAATNRPKALDS 350 +IF DELD++ RG S + + D+ ++QLL E+D D++ V V+ ATNRP LD Sbjct: 750 VIFFDELDSIAPHRGNSSDSGNVMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDP 809 Query: 351 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 530 +L RPGRF + V++G+ E + + L K +++ + ++ N P GAD+ Sbjct: 810 SLLRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMYA 869 Query: 531 IVNEAALLAARR 566 + ++A L A +R Sbjct: 870 LCSDAVLSAIKR 881 Score = 38.9 bits (89), Expect = 0.013 Identities = 25/92 (27%), Positives = 45/92 (48%) Frame = +3 Query: 9 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 188 LL G P TGKT + VA P F++S+ EF + A++ + ++ +II Sbjct: 426 LLHGNPFTGKTKAVEEVASLFSAPVFTISSYEFADATADHLEAKLDMFVQNVVKSPCAII 485 Query: 189 FIDELDAVGGSRGRSFNDERDQTLNQLLTEMD 284 F+ +LD + S +++ LL+++D Sbjct: 486 FVKDLDVLSISSDEGNIVPGSKSIQILLSKID 517
>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog| Length = 413 Score = 140 bits (353), Expect = 3e-33 Identities = 85/200 (42%), Positives = 118/200 (59%), Gaps = 3/200 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPGTGKT+LAKAVA F V SEFV+ ++G G VRD+F+ AKE AP+ Sbjct: 196 GVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPA 255 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DA+ +R + E + L +LL +MDGFD V V V+ ATNR LD A Sbjct: 256 IIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPA 315 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ +PD +R + V K+ L ++ ++ D V+ + A++ I Sbjct: 316 LLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLE-DYVSR-PDKISAAEITAI 373 Query: 534 VNEAALLAARRGGDIVARED 593 EA + A R+ ++ +D Sbjct: 374 CQEAGMHAVRKNRYVILPKD 393
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 140 bits (353), Expect = 3e-33 Identities = 78/196 (39%), Positives = 123/196 (62%), Gaps = 8/196 (4%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPGTGKT+LAKAVA E G FF+VS++ + G VR LF+ A+ APS Sbjct: 269 GVLMVGPPGTGKTMLAKAVATECGTTFFNVSSASLTSKYHGESEKLVRLLFEMARFYAPS 328 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDGF-------DSDVKVIVMAATNRPK 338 IFIDE+D++ RG E + + ++LL +MDG +S V+V+AATN P Sbjct: 329 TIFIDEIDSICSKRGTGSEHEASRRVKSELLIQMDGVSGPSAGEESSKMVMVLAATNFPW 388 Query: 339 ALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGA 518 +D AL R R +++++ +P+++GR ++L ++L++VPL +D ++ +A G GA Sbjct: 389 DIDEALRR--RLEKRIYIPLPEIDGREQLLRINLKEVPLADDIDL--KSIAEKMDGYSGA 444 Query: 519 DLANIVNEAALLAARR 566 D+ N+ +A+++A RR Sbjct: 445 DITNVCRDASMMAMRR 460
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 139 bits (350), Expect = 7e-33 Identities = 77/189 (40%), Positives = 120/189 (63%), Gaps = 1/189 (0%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGK+ LAKAVA EAG FFS+S+S+ V ++G VR LF+ A+E PS Sbjct: 164 GILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPS 223 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVK-VIVMAATNRPKALDSALC 359 IIFIDE+D++ GSR ++ + + L +M+G D V+V+ ATN P LDSA+ Sbjct: 224 IIFIDEIDSLCGSRSEGESESSRRIKTEFLVQMNGVGKDESGVLVLGATNIPWTLDSAIR 283 Query: 360 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 539 R RF +++++ +P+ R ++ +++ K+P E S+ +L A +T G G+D++ +V Sbjct: 284 R--RFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKEL-AKMTDGYSGSDISIVVR 340 Query: 540 EAALLAARR 566 +A + RR Sbjct: 341 DAIMEPVRR 349
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 139 bits (350), Expect = 7e-33 Identities = 86/214 (40%), Positives = 132/214 (61%), Gaps = 8/214 (3%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPGTGKT+LAKAVA E G FF+VS+S + G VR LF+ A+ AP+ Sbjct: 241 GVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPT 300 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDGF-------DSDVKVIVMAATNRPK 338 IFIDE+D++ RG S E + + ++LL +MDG D V+V+AATN P Sbjct: 301 TIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPW 360 Query: 339 ALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGA 518 +D AL R R +++++ +P +GR ++L + LR+V L+ D + + +A+ T G GA Sbjct: 361 DIDEALRR--RLEKRIYIPLPTAKGRAELLKISLREVELDPDVHL--EDIADKTEGYSGA 416 Query: 519 DLANIVNEAALLAARRGGDIVAREDIMDAIEREK 620 D+ NI +A+L+A RR + ++ E+I A+ +E+ Sbjct: 417 DITNICRDASLMAMRRRINGLSPEEIR-ALSKEE 449
>TBP7_YEAST (P40340) TAT-binding homolog 7| Length = 1379 Score = 139 bits (349), Expect = 9e-33 Identities = 82/193 (42%), Positives = 115/193 (59%), Gaps = 5/193 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAG-----EAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAK 167 GVL GPPGTGKTL+A+A+A E I FF ++ + +VG ++R LF+EAK Sbjct: 449 GVLFHGPPGTGKTLMARALAASCSSDERKITFFMRKGADILSKWVGEAERQLRLLFEEAK 508 Query: 168 EAAPSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 347 + PSIIF DE+D + R ++ LL MDG D+ +VIV+ ATNRP A+D Sbjct: 509 KHQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTLLALMDGMDNRGQVIVIGATNRPDAVD 568 Query: 348 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 527 AL RPGRF R+ + +PD++ R KIL + RK + I D +A +T G GADL Sbjct: 569 PALRRPGRFDREFYFPLPDVKARFKILQIQTRKWSSPLSTNFI-DKLAFLTKGYGGADLR 627 Query: 528 NIVNEAALLAARR 566 ++ EAAL++ +R Sbjct: 628 SLCTEAALISIQR 640
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 139 bits (349), Expect = 9e-33 Identities = 87/214 (40%), Positives = 131/214 (61%), Gaps = 8/214 (3%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPGTGKT+LAKAVA E G FF+VS+S + G VR LF+ A+ AP+ Sbjct: 241 GVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPT 300 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDGF-------DSDVKVIVMAATNRPK 338 IFIDE+D++ RG S E + + ++LL +MDG D V+V+AATN P Sbjct: 301 TIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPW 360 Query: 339 ALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGA 518 +D AL R R +++++ +P +GR ++L + LR+V L D +I + +A T G GA Sbjct: 361 DIDEALRR--RLEKRIYIPLPTAKGRAELLKISLREVEL--DPDIHLEDIAEKTEGYSGA 416 Query: 519 DLANIVNEAALLAARRGGDIVAREDIMDAIEREK 620 D+ NI +A+L+A RR + ++ E+I A+ +E+ Sbjct: 417 DITNICRDASLMAMRRRINGLSPEEIR-ALSKEE 449
>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1000 Score = 138 bits (347), Expect = 2e-32 Identities = 79/192 (41%), Positives = 113/192 (58%), Gaps = 4/192 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+L GPPGTGKTLLAKA+A + FFSV E + M++G A VR +F++A++A P Sbjct: 737 GILFYGPPGTGKTLLAKAIASNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPC 796 Query: 183 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVK-VIVMAATNRPKALDSA 353 +IF DELD+V RG + D+ ++QLL E+DG S V V+ ATNRP LD A Sbjct: 797 VIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSGGDGVFVIGATNRPDLLDEA 856 Query: 354 LCRPGRFSRKVFVGVPDLEGRR-KILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 530 L RPGRF + +++G+ D + ++ I+ RK LE +I+ D+ GAD Sbjct: 857 LLRPGRFDKMLYLGISDTDKKQANIIKALTRKFTLESGIDIL-DIAKKCPFNYTGADFYA 915 Query: 531 IVNEAALLAARR 566 + ++A L A R Sbjct: 916 LCSDALLNAMTR 927
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 137 bits (346), Expect = 2e-32 Identities = 83/195 (42%), Positives = 113/195 (57%), Gaps = 7/195 (3%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+L GPPGTGKTLLAKA+A + FFSV E + M++G A VR +F+ A++A P Sbjct: 854 GILFYGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRKVFQRARDAKPC 913 Query: 183 IIFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGF---DSDVKVIVMAATNRPKALD 347 ++F DELD+V RG + E D+ ++QLL E+DG D V V+ ATNRP LD Sbjct: 914 VVFFDELDSVAPKRGNQGDSEGVMDRIVSQLLAELDGMSGGDGGDGVFVVGATNRPDLLD 973 Query: 348 SALCRPGRFSRKVFVGVPDL-EGRRKILAVHLRKVPLEEDSEIICDLVANVTP-GLVGAD 521 AL RPGRF + +++GV D E + KI+ RK L ++ D VA P GAD Sbjct: 974 EALLRPGRFDKMLYLGVSDTHEKQSKIMEALSRKFHLHPSVDL--DKVAESCPFTFTGAD 1031 Query: 522 LANIVNEAALLAARR 566 + ++A L A R Sbjct: 1032 FYALCSDAMLNAMTR 1046
>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1459 Score = 137 bits (346), Expect = 2e-32 Identities = 83/196 (42%), Positives = 115/196 (58%), Gaps = 8/196 (4%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+L GPPGTGKTLLAKA+A E + FFSV E + M++G A VR +F+ A++A P Sbjct: 1065 GILFYGPPGTGKTLLAKAIATEFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPC 1124 Query: 183 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVK----VIVMAATNRPKAL 344 ++F DELD+V RG + D+ ++QLL E+DG + + V V+ ATNRP L Sbjct: 1125 VVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMNGGEENSGGVFVIGATNRPDLL 1184 Query: 345 DSALCRPGRFSRKVFVGVPDLEGRR-KILAVHLRKVPLEEDSEIICDLVANVTP-GLVGA 518 D+AL RPGRF + +++GV D ++ IL RK L D + D VA P GA Sbjct: 1185 DTALLRPGRFDKMLYLGVSDTHRKQATILEALTRKFALHPD--VSLDRVAEQLPLTYTGA 1242 Query: 519 DLANIVNEAALLAARR 566 DL + ++A L A R Sbjct: 1243 DLYALCSDAMLKAITR 1258
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 137 bits (346), Expect = 2e-32 Identities = 84/214 (39%), Positives = 132/214 (61%), Gaps = 8/214 (3%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPGTGKT+LAKAVA E G FF+VS+S + G VR LF+ A+ AP+ Sbjct: 243 GVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPT 302 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDGF-------DSDVKVIVMAATNRPK 338 IFIDE+D++ RG S E + + ++LL +MDG D V+V+AATN P Sbjct: 303 TIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPW 362 Query: 339 ALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGA 518 +D AL R R +++++ +P +GR ++L ++LR+V L+ D ++ + +A G GA Sbjct: 363 DIDEALRR--RLEKRIYIPLPTAKGRAELLKINLREVELDPDIQL--EDIAEKIEGYSGA 418 Query: 519 DLANIVNEAALLAARRGGDIVAREDIMDAIEREK 620 D+ N+ +A+L+A RR + ++ E+I A+ +E+ Sbjct: 419 DITNVCRDASLMAMRRRINGLSPEEIR-ALSKEE 451
>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome| biogenesis disorder protein 1) Length = 1283 Score = 137 bits (345), Expect = 3e-32 Identities = 77/185 (41%), Positives = 108/185 (58%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKTLLA +A E+ + F SV E + ++G VRD+F A+ A P Sbjct: 876 GILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPC 935 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 I+F DE +++ RG D+ +NQLLT++DG + V V+AAT+RP +D AL R Sbjct: 936 ILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLR 995 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 PGR + V+ PD R +IL V +PL +D ++ VA+VT GADL ++ Sbjct: 996 PGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDL--QHVASVTDSFTGADLKALLYN 1053 Query: 543 AALLA 557 A L A Sbjct: 1054 AQLEA 1058 Score = 38.5 bits (88), Expect = 0.016 Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 22/202 (10%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSAS-EFVEMFVGRGAARVRDL-------FKE 161 +LL G G+GK+ LAKA+ EA F + A E V+ RG R+ ++ F E Sbjct: 595 LLLTGGKGSGKSTLAKAICKEA---FDKLDAHVERVDCKALRG-KRLENIQKTLEVAFSE 650 Query: 162 AKEAAPSIIFIDELDAVGG-----SRGRSFNDERDQTLNQLLTEM-DGFDSDVKVIVMAA 323 A PS++ +D+LD + G S + + Q L L +M F S ++ + A Sbjct: 651 AVWMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQSQRLAHALNDMIKEFISMGSLVALIA 710 Query: 324 TNRPKALDSALCRPGR----FSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDL-- 485 T++ + L + F + P+ E R +IL ++ K L+ D DL Sbjct: 711 TSQSQQSLHPLLVSAQGVHIFQCVQHIQPPNQEQRCEILC-NVIKNKLDCDINKFTDLDL 769 Query: 486 --VANVTPGLVGADLANIVNEA 545 VA T G V D +V+ A Sbjct: 770 QHVAKETGGFVARDFTVLVDRA 791
>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1017 Score = 136 bits (343), Expect = 4e-32 Identities = 78/192 (40%), Positives = 113/192 (58%), Gaps = 4/192 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+L GPPGTGKTLLAKA+A + FFSV E + M++G A VR +F++A++A P Sbjct: 753 GILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPC 812 Query: 183 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVK-VIVMAATNRPKALDSA 353 +IF DE+D+V RG + D+ ++QLL E+DG SD V ++ ATNRP LD A Sbjct: 813 VIFFDEVDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSDGDGVFIIGATNRPDLLDEA 872 Query: 354 LCRPGRFSRKVFVGVPDL-EGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 530 L RPGRF + +++G+ D E + I+ RK + D +LV++ GAD Sbjct: 873 LLRPGRFDKLIYLGIADTREKQANIMRALTRKFKVSSDIN-FDELVSDFPFSYTGADFYA 931 Query: 531 IVNEAALLAARR 566 + ++A L A R Sbjct: 932 LCSDAMLKAMTR 943
>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)| Length = 415 Score = 136 bits (343), Expect = 4e-32 Identities = 85/200 (42%), Positives = 114/200 (57%), Gaps = 3/200 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPG GKT+LA AVA F V SEFV+ ++G G VRD+F+ AKE +P+ Sbjct: 198 GVLMYGPPGCGKTMLANAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPA 257 Query: 183 IIFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 IIFIDE+DA+ R + E + L +LL +MDGFD V V+ ATNR LD A Sbjct: 258 IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPA 317 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 533 L RPGR RK+ +PD +R I + K+ L E+ ++ + VA + GAD+ I Sbjct: 318 LLRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLE-EFVAR-PDRVSGADINAI 375 Query: 534 VNEAALLAARRGGDIVARED 593 EA + A R IV +D Sbjct: 376 CQEAGMNAVRENRYIVLPKD 395
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 135 bits (341), Expect = 8e-32 Identities = 77/193 (39%), Positives = 111/193 (57%), Gaps = 5/193 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPG GKTLLAKAVA E+ F S+ E + +VG +R +F A+ + P Sbjct: 569 GVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVPC 628 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 +IF DELDA+ R S ++ + +N LLTE+DG + + V+ ATNRP +D A+ R Sbjct: 629 VIFFDELDALVPRRDTSLSESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLR 688 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRK--VPLEED---SEIICDLVANVTPGLVGADLA 527 PGR + +F+ +P+ E + I+ + PL D EII + N GADLA Sbjct: 689 PGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCN---NFSGADLA 745 Query: 528 NIVNEAALLAARR 566 +V E+++LA +R Sbjct: 746 ALVRESSVLALKR 758 Score = 132 bits (333), Expect = 6e-31 Identities = 82/195 (42%), Positives = 113/195 (57%), Gaps = 7/195 (3%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPG GKT +A A+AGE +PF S+SA V G ++RDLF EA+ AP Sbjct: 241 GVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPC 300 Query: 183 IIFIDELDAVGGSR-GRSFNDERDQTLNQLLTEMDGFDSD----VKVIVMAATNRPKALD 347 ++F DE+DA+ R G + + + + QLLT MD + VI++ ATNRP +LD Sbjct: 301 LVFFDEIDAITPKRDGGAQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLD 360 Query: 348 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVP--LEEDSEIICDLVANVTPGLVGAD 521 +AL R GRF R++ + VP+ R I L+K+ L+ D I +A +TPG VGAD Sbjct: 361 AALRRAGRFDREICLNVPNEVSRLHI----LKKMSDNLKIDGAIDFAKLAKLTPGFVGAD 416 Query: 522 LANIVNEAALLAARR 566 L +V A A +R Sbjct: 417 LKALVTAAGTCAIKR 431
>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)| Length = 1388 Score = 135 bits (341), Expect = 8e-32 Identities = 86/217 (39%), Positives = 122/217 (56%), Gaps = 9/217 (4%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+L GPPGTGKTLLAKA+A E + FFSV E + M++G A VR +F+ A++A P Sbjct: 1029 GILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPC 1088 Query: 183 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGF----DSDVKVIVMAATNRPKAL 344 ++F DELD+V RG + D+ ++QLL E+DG D+ V V+ ATNRP L Sbjct: 1089 VVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGDDTSGGVFVIGATNRPDLL 1148 Query: 345 DSALCRPGRFSRKVFVGVPDLEGRR-KILAVHLRKVPLEEDSEIICDLVANVTP-GLVGA 518 D AL RPGRF + +++GV D ++ KIL RK L + VA P GA Sbjct: 1149 DPALLRPGRFDKMLYLGVSDTHDKQLKILEALTRKFTLH--PSVSLHSVAQQLPFTYTGA 1206 Query: 519 DLANIVNEAALLA-ARRGGDIVAREDIMDAIEREKYG 626 D + ++A L A R+ + A+ ++A R + G Sbjct: 1207 DFYALCSDAMLKAVTRQAASVDAKIRELEAQPRSRTG 1243
>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Fragment) Length = 486 Score = 135 bits (341), Expect = 8e-32 Identities = 81/206 (39%), Positives = 123/206 (59%), Gaps = 8/206 (3%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPGTGKTLLAKAVA E FF++S+S + G VR LF+ A+ AP+ Sbjct: 241 GVLMVGPPGTGKTLLAKAVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAPT 300 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLN-QLLTEMDGF-------DSDVKVIVMAATNRPK 338 IFIDE+D++ RG S E + + +LL +MDG D V+V+AATN P Sbjct: 301 TIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENEDPSKMVMVLAATNFPW 360 Query: 339 ALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGA 518 +D AL R R +++++ +P +GR ++L ++L+++ L +D I C +A G GA Sbjct: 361 DIDEALRR--RLEKRIYIPLPSAKGREELLRINLKELELADDVNIEC--IAENMDGYSGA 416 Query: 519 DLANIVNEAALLAARRGGDIVAREDI 596 D+ N+ +A+L+A RR + + E+I Sbjct: 417 DITNVCRDASLMAMRRRIEGLTPEEI 442
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 135 bits (340), Expect = 1e-31 Identities = 81/192 (42%), Positives = 112/192 (58%), Gaps = 4/192 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+L GPPGTGKTLLAKAVA + FFSV E + M++G A VR +F+ A++A P Sbjct: 758 GILFYGPPGTGKTLLAKAVATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPC 817 Query: 183 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVK-VIVMAATNRPKALDSA 353 +IF DELD+V RG + D+ ++QLL E+DG + + V+ ATNRP LD A Sbjct: 818 VIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGLSTGGDGLFVIGATNRPDLLDEA 877 Query: 354 LCRPGRFSRKVFVGVPDL-EGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 530 L RPGRF + +++G+ D E + IL RK L+ D + DL A+ GAD Sbjct: 878 LLRPGRFDKLLYLGISDTNEKQANILRALTRKFTLDPDVS-LDDLAASCPFTYTGADFYA 936 Query: 531 IVNEAALLAARR 566 + ++A L A R Sbjct: 937 LCSDAMLNAMTR 948
>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)| (Katanin ATPase-containing subunit) Length = 472 Score = 134 bits (338), Expect = 2e-31 Identities = 85/212 (40%), Positives = 128/212 (60%), Gaps = 12/212 (5%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 185 ++LAGPPGTGKTL+A+A+A E+ FF+VS+++ + G VR LF+ A+ APSI Sbjct: 229 MVLAGPPGTGKTLIARAIASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSI 288 Query: 186 IFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDG----FDSDVKVIVMAATNRPKALDS 350 IFIDE+D +GG RG S E + + ++ L +MDG FDS +V V+AATN P LD Sbjct: 289 IFIDEIDTLGGQRGNSGEHEASRRVKSEFLVQMDGSQNKFDSR-RVFVLAATNIPWELDE 347 Query: 351 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 530 AL R RF +++F+ +PD++ R+K++ + P + EI D +A T G GAD+ + Sbjct: 348 ALRR--RFEKRIFIPLPDIDARKKLIEKSMEGTP--KSDEINYDDLAARTEGFSGADVVS 403 Query: 531 IVNEAALLAAR-------RGGDIVAREDIMDA 605 + AA+ R RGG++ A + + A Sbjct: 404 LCRTAAINVLRRYDTKSLRGGELTAAMESLKA 435
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 134 bits (338), Expect = 2e-31 Identities = 77/216 (35%), Positives = 115/216 (53%), Gaps = 9/216 (4%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL G PG GKTLLA AVA + G+ F SV E + F+G +R+LF+ A+ P Sbjct: 733 GILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPC 792 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 I+F DE D++ RG D+ +NQLLT+MDG + V ++AAT+RP +DSAL R Sbjct: 793 ILFFDEFDSIAPKRGHDSTGVTDRVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLR 852 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHL---------RKVPLEEDSEIICDLVANVTPGLVG 515 PGR + V +P R IL + +K LE+++++ L+A T G G Sbjct: 853 PGRLDKSVICNIPTESERLDILQAIVNSKDKDTGQKKFALEKNADL--KLIAEKTAGFSG 910 Query: 516 ADLANIVNEAALLAARRGGDIVAREDIMDAIEREKY 623 ADL + A L + R + +++ + +Y Sbjct: 911 ADLQGLCYNAYLKSVHRWLSAADQSEVVPGNDNIEY 946
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 134 bits (337), Expect = 2e-31 Identities = 79/189 (41%), Positives = 117/189 (61%), Gaps = 1/189 (0%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGK+ LAKAVA EA FFSVS+S+ V ++G V+ LF A+E PS Sbjct: 168 GILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPS 227 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVK-VIVMAATNRPKALDSALC 359 IIFIDE+DA+ G+RG ++ + +LL +M+G +D + V+V+ ATN P LDSA+ Sbjct: 228 IIFIDEVDALTGTRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIR 287 Query: 360 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 539 R RF R++++ +PDL R + +++ P E L A +T G G+D+A +V Sbjct: 288 R--RFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGA-MTEGYSGSDIAVVVK 344 Query: 540 EAALLAARR 566 +A + R+ Sbjct: 345 DALMQPIRK 353
>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1198 Score = 134 bits (336), Expect = 3e-31 Identities = 77/196 (39%), Positives = 114/196 (58%), Gaps = 8/196 (4%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+L GPPGTGKTLLAKA+A + FFSV E + M++G A VR +F++A++A P Sbjct: 874 GILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPC 933 Query: 183 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVK-----VIVMAATNRPKA 341 +IF DELD+V RG + D+ ++QLL E+DG + V V+ ATNRP Sbjct: 934 VIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGAEGGGDGVFVVGATNRPDL 993 Query: 342 LDSALCRPGRFSRKVFVGVPDL-EGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGA 518 LD AL RPGRF + +++G+ D E + KIL RK L ++ ++ ++ + GA Sbjct: 994 LDEALLRPGRFDKMLYLGISDTDEKQSKILEALTRKFKLADNVDLY-EIAKRCSFTFTGA 1052 Query: 519 DLANIVNEAALLAARR 566 D + +++ L A R Sbjct: 1053 DFYALCSDSMLNAMTR 1068
>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 134 bits (336), Expect = 3e-31 Identities = 81/215 (37%), Positives = 126/215 (58%), Gaps = 8/215 (3%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPGTGKTLLAKAVA E FF+VS+S + G VR LF+ A+ +P+ Sbjct: 244 GVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPA 303 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLN-QLLTEMDGF-------DSDVKVIVMAATNRPK 338 IFIDE+D++ RG S E + + +LL +MDG D V+V+AATN P Sbjct: 304 TIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPW 363 Query: 339 ALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGA 518 +D AL R R +++++ +P +GR ++L + LR++ L +D ++ +A G GA Sbjct: 364 DIDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVDLAS--IAENMEGYSGA 419 Query: 519 DLANIVNEAALLAARRGGDIVAREDIMDAIEREKY 623 D+ N+ +A+L+A RR + + E+I + + E + Sbjct: 420 DITNVCRDASLMAMRRRIEGLTPEEIRNLSKEEMH 454
>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1135 Score = 133 bits (335), Expect = 4e-31 Identities = 81/203 (39%), Positives = 115/203 (56%), Gaps = 7/203 (3%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+L GPPGTGKTLLAKA+A + FFSV E + M++G A VR +F++A++A P Sbjct: 848 GILFYGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPC 907 Query: 183 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGF---DSDVKVIVMAATNRPKALD 347 +IF DELD+V RG + D+ ++QLL E+DG + V V+ ATNRP LD Sbjct: 908 VIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGAEGGDGVFVVGATNRPDLLD 967 Query: 348 SALCRPGRFSRKVFVGVPDL-EGRRKILAVHLRKVPLEEDSEIICDLVANVTP-GLVGAD 521 AL RPGRF + +++G+ D E + KI+ RK L D + +A P GAD Sbjct: 968 EALLRPGRFDKMLYLGIADTHEKQAKIIQALTRKFQL--DPSVDLGRIAETCPFTYTGAD 1025 Query: 522 LANIVNEAALLAARRGGDIVARE 590 + ++A L A R V ++ Sbjct: 1026 FYALCSDAMLNAMTRTAGAVEKK 1048
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 133 bits (334), Expect = 5e-31 Identities = 74/185 (40%), Positives = 103/185 (55%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL G PG GKTLLA AVA + G+ F S+ E + ++G VR+LF+ A+ A P Sbjct: 835 GILLYGYPGCGKTLLASAVAAQCGLNFISIKGPEILNKYIGPSEQSVRELFERAQAAKPC 894 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 I+F DE D++ RG D+ +NQ+LT+MDG + V V+AAT+RP +DSAL R Sbjct: 895 ILFFDEFDSIAPKRGHDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLR 954 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 PGR + V +PD + R IL R + + + + VA G GADL + Sbjct: 955 PGRLDKSVICDMPDFDDRLDILQSVTRNMNVSKSVNL--SSVAGECSGFSGADLQALAYN 1012 Query: 543 AALLA 557 A L A Sbjct: 1013 AYLKA 1017 Score = 43.9 bits (102), Expect = 4e-04 Identities = 41/205 (20%), Positives = 90/205 (43%), Gaps = 4/205 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAG---EAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 173 G LL G G+GK+L+ VA G ++ + + D+F E Sbjct: 518 GSLLFGTSGSGKSLVISQVAQIVTNKGHFVKLLNCDKIMSESYNNLRGIFEDIFSEVSWK 577 Query: 174 APSIIFIDELDA-VGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 350 APS++ +++LD+ + + S + + Q ++++ + + ++A++ ++L+S Sbjct: 578 APSLLILEDLDSLIPAEQEHSDSSQSRQLSEYFISKLSAQTINRDITILASSKSKESLNS 637 Query: 351 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 530 + + PD E R++IL +L + + + + +A T G + DL Sbjct: 638 LIFTTHLIEHDFQLRAPDKEARKQILQSYLDTLNVFCSEGELLNNIAVETEGYLPKDL-- 695 Query: 531 IVNEAALLAARRGGDIVAREDIMDA 605 +L R D+++R+ + D+ Sbjct: 696 -----KVLCDRAYHDLISRDILADS 715
>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 132 bits (333), Expect = 6e-31 Identities = 81/215 (37%), Positives = 124/215 (57%), Gaps = 8/215 (3%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPGTGKTLLAKAVA E FF+VS+S + G VR LF+ A+ +P+ Sbjct: 244 GVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPA 303 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLN-QLLTEMDGF-------DSDVKVIVMAATNRPK 338 IFIDE+D++ RG S E + + +LL +MDG D V+V+AATN P Sbjct: 304 TIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPW 363 Query: 339 ALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGA 518 +D AL R R +++++ +P +GR ++L + LR++ L +D + +A G GA Sbjct: 364 DIDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVNLAS--IAENMEGYSGA 419 Query: 519 DLANIVNEAALLAARRGGDIVAREDIMDAIEREKY 623 D+ N+ +A+L+A RR + + E+I + E + Sbjct: 420 DITNVCRDASLMAMRRRIEGLTPEEIRNLSREEMH 454
>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) (Lipotransin) Length = 491 Score = 132 bits (331), Expect = 1e-30 Identities = 80/206 (38%), Positives = 121/206 (58%), Gaps = 8/206 (3%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPGTGKTLLAKAVA E FF+VS+S + G VR LF+ A+ +P+ Sbjct: 244 GVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPA 303 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLN-QLLTEMDGF-------DSDVKVIVMAATNRPK 338 IFIDE+D++ RG S E + + +LL +MDG D V+V+AATN P Sbjct: 304 TIFIDEIDSICSRRGTSEEHEASRRMKAELLVQMDGVGGASENDDPSKMVMVLAATNFPW 363 Query: 339 ALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGA 518 +D AL R R +++++ +P +GR ++L + LR++ L +D + +A G GA Sbjct: 364 DIDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVNLAS--IAENMEGYSGA 419 Query: 519 DLANIVNEAALLAARRGGDIVAREDI 596 D+ N+ +A+L+A RR + + E+I Sbjct: 420 DITNVCRDASLMAMRRRIEGLTPEEI 445
>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 381 Score = 130 bits (327), Expect = 3e-30 Identities = 70/121 (57%), Positives = 88/121 (72%), Gaps = 3/121 (2%) Frame = +3 Query: 210 VGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRPGRFSR 380 +G RG +DER+QTLNQ+L EMDGF + VIV+AATNRP LD AL RPGRF R Sbjct: 1 MGRQRGAGLGGGHDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDR 60 Query: 381 KVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAA 560 +V VG+PD++GR +IL VH+RKV + +D + + +A TPG GADLAN+VNEAAL AA Sbjct: 61 QVVVGLPDVKGREQILKVHMRKVSVAQDVDAM--TLARGTPGYSGADLANLVNEAALFAA 118 Query: 561 R 563 R Sbjct: 119 R 119
>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAY4) Length = 1024 Score = 130 bits (326), Expect = 4e-30 Identities = 77/194 (39%), Positives = 113/194 (58%), Gaps = 6/194 (3%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+L GPPGTGKTLLAKA+A + FFSV E + M++G A VR +F++A++A P Sbjct: 754 GILFYGPPGTGKTLLAKAIATTFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPC 813 Query: 183 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDS--DVKVIVMAATNRPKALDS 350 ++F DELD+V RG + D+ ++QLL E+DG + V V+ ATNRP LD Sbjct: 814 VVFFDELDSVAPQRGNQGDSGGVMDRIVSQLLAELDGMSTAGGEGVFVVGATNRPDLLDE 873 Query: 351 ALCRPGRFSRKVFVGVPDL-EGRRKILAVHLRKVPLEEDSEIICDLVANVTP-GLVGADL 524 AL RPGRF + +++G+ D E ++ I+ RK L D + + ++ P GAD Sbjct: 874 ALLRPGRFDKMLYLGISDTHEKQQTIMEALTRKFRLAAD--VSLEAISKRCPFTFTGADF 931 Query: 525 ANIVNEAALLAARR 566 + ++A L A R Sbjct: 932 YALCSDAMLNAMTR 945
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 129 bits (325), Expect = 5e-30 Identities = 80/197 (40%), Positives = 116/197 (58%), Gaps = 9/197 (4%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVL+ GPPGTGKTLLAKAVA E G FF+VS++ + G VR LF A+ APS Sbjct: 274 GVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPS 333 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDGFDSDVK--------VIVMAATNRP 335 IFIDE+D++ SRG S E + + ++LL ++DG + V+V+AATN P Sbjct: 334 TIFIDEIDSLCNSRGGSGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFP 393 Query: 336 KALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVG 515 +D AL R R +++++ +PD E R+ ++ ++LR V + D I + VA T G G Sbjct: 394 WDIDEALRR--RLEKRIYIPLPDFESRKALININLRTVEVASDVNI--EDVARRTEGYSG 449 Query: 516 ADLANIVNEAALLAARR 566 DL N+ +A++ RR Sbjct: 450 DDLTNVCRDASMNGMRR 466
>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1381 Score = 129 bits (323), Expect = 9e-30 Identities = 74/199 (37%), Positives = 109/199 (54%), Gaps = 6/199 (3%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+L GPPGTGKTLLAKA+A E + FFSV E + M++G A VR +F+ A++A P Sbjct: 1026 GILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPC 1085 Query: 183 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDV----KVIVMAATNRPKAL 344 ++F DELD+V RG + D+ ++QLL E+DG V V+ ATNRP L Sbjct: 1086 VVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGEGGGGGVFVIGATNRPDLL 1145 Query: 345 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 524 D AL RPGRF + +++GV D ++ + L + + + + + GAD Sbjct: 1146 DPALLRPGRFDKMLYLGVSDTHDKQVTIMEALTRKFTLHPTVSLRSVAERLPFTYTGADF 1205 Query: 525 ANIVNEAALLAARRGGDIV 581 + ++A L A R +V Sbjct: 1206 YALCSDAMLKAVTRQATLV 1224
>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2| Length = 1091 Score = 128 bits (321), Expect = 2e-29 Identities = 76/193 (39%), Positives = 108/193 (55%), Gaps = 5/193 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAG-----IPFFSVSASEFVEMFVGRGAARVRDLFKEAK 167 G L GPPGTGKTL+A+A+A E + FF ++ + +VG ++R LF +A Sbjct: 293 GCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAY 352 Query: 168 EAAPSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 347 + PSIIF DE+D + R + ++ LL MDG DS +++V+ ATNR A+D Sbjct: 353 QMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDAID 412 Query: 348 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 527 AL RPGRF R+ +PD E R++IL +H R + + +L N G GAD+ Sbjct: 413 PALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCV-GYRGADIK 471 Query: 528 NIVNEAALLAARR 566 +I EAAL A RR Sbjct: 472 SICAEAALCALRR 484
>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)| Length = 754 Score = 128 bits (321), Expect = 2e-29 Identities = 79/206 (38%), Positives = 120/206 (58%), Gaps = 15/206 (7%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKT++AKAVA E+ FFSVSAS + ++G VR LF AK+ +PS Sbjct: 506 GMLLFGPPGTGKTMIAKAVATESNSTFFSVSASSLLSKYLGESEKLVRALFYMAKKLSPS 565 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDS------------DVKVIVMAAT 326 IIFIDE+D++ +R + N+ + +LL + S D +V+V+ AT Sbjct: 566 IIFIDEIDSMLTARSDNENESSRRIKTELLIQWSSLSSATAQSEDRNNTLDSRVLVLGAT 625 Query: 327 NRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDS---EIICDLVANV 497 N P A+D A R RFSRK+++ +PD E R HL+++ ++ + ++ +L+ + Sbjct: 626 NLPWAIDDAARR--RFSRKLYIPLPDYETR----LYHLKRLMAKQKNSLQDLDYELITEM 679 Query: 498 TPGLVGADLANIVNEAALLAARRGGD 575 T G G+DL ++ EAA+ R GD Sbjct: 680 TEGFSGSDLTSLAKEAAMEPIRDLGD 705
>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2| Length = 1390 Score = 127 bits (320), Expect = 2e-29 Identities = 75/193 (38%), Positives = 108/193 (55%), Gaps = 5/193 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAG-----IPFFSVSASEFVEMFVGRGAARVRDLFKEAK 167 G L GPPGTGKTL+A+A+A E + FF ++ + +VG ++R LF +A Sbjct: 462 GCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAY 521 Query: 168 EAAPSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 347 + PSIIF DE+D + R + ++ LL MDG DS +++V+ ATNR ++D Sbjct: 522 QMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSID 581 Query: 348 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 527 AL RPGRF R+ +PD E R++IL +H R + + +L N G GAD+ Sbjct: 582 PALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCV-GYCGADIK 640 Query: 528 NIVNEAALLAARR 566 +I EAAL A RR Sbjct: 641 SICAEAALCALRR 653
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 127 bits (319), Expect = 3e-29 Identities = 79/185 (42%), Positives = 109/185 (58%), Gaps = 2/185 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPG GKT+LAKAVA E+ FF++SA+ +VG G VR LF A+E PS Sbjct: 375 GLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPS 434 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDS--DVKVIVMAATNRPKALDSAL 356 IIFIDE+D++ R +D + + L E DG S D +V+VM ATNRP+ LD A+ Sbjct: 435 IIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAV 494 Query: 357 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 536 R RF ++V+V +P+ E R +L L K + + L A +T G G+DL + Sbjct: 495 LR--RFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQL-ARMTDGYSGSDLTALA 551 Query: 537 NEAAL 551 +AAL Sbjct: 552 KDAAL 556
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 127 bits (319), Expect = 3e-29 Identities = 79/185 (42%), Positives = 109/185 (58%), Gaps = 2/185 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPG GKT+LAKAVA E+ FF++SA+ +VG G VR LF A+E PS Sbjct: 377 GLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPS 436 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDS--DVKVIVMAATNRPKALDSAL 356 IIFIDE+D++ R +D + + L E DG S D +V+VM ATNRP+ LD A+ Sbjct: 437 IIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAV 496 Query: 357 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 536 R RF ++V+V +P+ E R +L L K + + L A +T G G+DL + Sbjct: 497 LR--RFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQL-ARMTDGYSGSDLTALA 553 Query: 537 NEAAL 551 +AAL Sbjct: 554 KDAAL 558
>TBP7_CAEEL (P54816) TAT-binding homolog 7| Length = 1242 Score = 127 bits (319), Expect = 3e-29 Identities = 75/192 (39%), Positives = 104/192 (54%), Gaps = 5/192 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAG-----IPFFSVSASEFVEMFVGRGAARVRDLFKEAK 167 GV+ GPPGTGKTL+A+A+A E + FF ++ + +VG ++R LF +A Sbjct: 427 GVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAY 486 Query: 168 EAAPSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 347 PSIIF DE+D + R + ++ LL MDG D +V+V+ ATNR LD Sbjct: 487 AMRPSIIFFDEIDGLAPVRSSKQDQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDTLD 546 Query: 348 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 527 AL RPGRF R++ +PDL RR+IL +H K + D +A T G GADL Sbjct: 547 PALRRPGRFDRELRFSLPDLNARRQILDIHTSKWEENKPIPETLDAIAERTSGYCGADLK 606 Query: 528 NIVNEAALLAAR 563 + EA L+ R Sbjct: 607 FLCTEAVLIGLR 618
>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 124 bits (312), Expect = 2e-28 Identities = 68/183 (37%), Positives = 111/183 (60%), Gaps = 1/183 (0%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 185 VL G PGTGKT+LAK++A E +P + + A+ + VG GA ++ +L++ A + APS+ Sbjct: 160 VLFHGSPGTGKTMLAKSLANELRVPLYLIKATSLIGEHVGDGARQIHELYELASKTAPSV 219 Query: 186 IFIDELDAVG-GSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 IFIDE+DA+G R +S + + +N LLTEMDG + + V+ + ATN P+ LD+A+ Sbjct: 220 IFIDEMDAIGLDRRFQSLRGDVSEVVNALLTEMDGINQNWGVVTIGATNNPELLDNAI-- 277 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 RF ++ +P + RR +L ++ +PL+ D + D + +T G+ G D+ V + Sbjct: 278 RSRFEEEIEFKLPGDDERRMMLEKYIETMPLDVDFSV--DKLVKLTKGMSGRDIKERVLK 335 Query: 543 AAL 551 AL Sbjct: 336 TAL 338
>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 124 bits (311), Expect = 2e-28 Identities = 74/207 (35%), Positives = 120/207 (57%), Gaps = 2/207 (0%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 185 VL G PGTGKT+LAK++A E +P + + A+ + VG GA ++ +L++ A + APS+ Sbjct: 160 VLFHGSPGTGKTMLAKSLANELKVPLYLIKATSLIGEHVGDGARQIHELYELASKTAPSV 219 Query: 186 IFIDELDAVG-GSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 IFIDE+DA+G R +S + + +N LLTEMDG + + V+ + ATN P+ LD A+ Sbjct: 220 IFIDEMDAIGLDRRYQSLRGDVSEVVNALLTEMDGINQNWGVVTIGATNNPELLDKAI-- 277 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 RF ++ +PD E R+ +L ++ +PL+ D + D + +T + G D+ + V + Sbjct: 278 RSRFEEEIEFKLPDDEERKLMLEKYIETMPLKVDFPV--DKLVKLTREMSGRDIKDRVLK 335 Query: 543 AAL-LAARRGGDIVAREDIMDAIEREK 620 AL A + V E I A++ K Sbjct: 336 TALHRAIAEDSESVRAEHIEYALKERK 362
>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494| Length = 371 Score = 123 bits (309), Expect = 4e-28 Identities = 77/205 (37%), Positives = 117/205 (57%), Gaps = 2/205 (0%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 185 VL GPPGTGKTL+A+A+A E F V A E + VG + +R+L++ A E+AP I Sbjct: 157 VLFYGPPGTGKTLMARALATETNSSFILVKAPELIGEHVGDASKMIRELYQRASESAPCI 216 Query: 186 IFIDELDAVGGSRG-RSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 +FIDELDA+G SR +S + + +N LLTE+DG + V+ +AATN P LD A+ Sbjct: 217 VFIDELDAIGLSREYQSLRGDVSEVVNALLTELDGIKENEGVVTIAATNNPAMLDPAI-- 274 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 RF ++ +P+ E R KI+ ++ +K+PL + + T G G D+ + Sbjct: 275 RSRFEEEIEFKLPNDEERLKIMELYAKKMPLPVKANL--KEFVEKTKGFSGRDIKEKFLK 332 Query: 543 AAL-LAARRGGDIVAREDIMDAIER 614 AL A D V++ED+ A+++ Sbjct: 333 PALHRAILEDRDYVSKEDLEWALKK 357
>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2| Length = 1040 Score = 123 bits (309), Expect = 4e-28 Identities = 72/193 (37%), Positives = 108/193 (55%), Gaps = 5/193 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAG-----IPFFSVSASEFVEMFVGRGAARVRDLFKEAK 167 G L GPPGTGKTL+A+A+A E + FF ++ + +VG ++R LF +A Sbjct: 117 GCLFYGPPGTGKTLVARALANECSRGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAY 176 Query: 168 EAAPSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 347 + P+IIF DE+D + R + ++ LL MDG DS +++V+ ATNR ++D Sbjct: 177 QMRPAIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSID 236 Query: 348 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 527 AL RPGRF R+ +PD R++IL +H R + ++ + +A G GAD+ Sbjct: 237 PALRRPGRFDREFLFSLPDKNARKEILKIHTRDWN-PKPVDMFLEELAEHCVGYCGADIK 295 Query: 528 NIVNEAALLAARR 566 +I EAAL A RR Sbjct: 296 SICAEAALCALRR 308
>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a| Length = 437 Score = 119 bits (298), Expect = 7e-27 Identities = 72/190 (37%), Positives = 116/190 (61%), Gaps = 2/190 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAG-IPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 179 G+LL GPPGTGK+ LAKAVA EA FFSVS+S+ + ++G V++LF+ A++ P Sbjct: 162 GILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKP 221 Query: 180 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGF-DSDVKVIVMAATNRPKALDSAL 356 SIIFIDE+D++ GSR + ++ + + L +M G +++ +V+ ATN P LDSA+ Sbjct: 222 SIIFIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAI 281 Query: 357 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 536 R RF +++++ +P+ R ++ +HL P I +L A T G GAD++ IV Sbjct: 282 RR--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHEL-ARKTEGYSGADISIIV 338 Query: 537 NEAALLAARR 566 ++ + R+ Sbjct: 339 RDSLMQPVRK 348
>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)| (VPS4-1) Length = 437 Score = 119 bits (298), Expect = 7e-27 Identities = 72/190 (37%), Positives = 116/190 (61%), Gaps = 2/190 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAG-IPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 179 G+LL GPPGTGK+ LAKAVA EA FFSVS+S+ + ++G V++LF+ A++ P Sbjct: 162 GILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKP 221 Query: 180 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGF-DSDVKVIVMAATNRPKALDSAL 356 SIIFIDE+D++ GSR + ++ + + L +M G +++ +V+ ATN P LDSA+ Sbjct: 222 SIIFIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAI 281 Query: 357 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 536 R RF +++++ +P+ R ++ +HL P I +L A T G GAD++ IV Sbjct: 282 RR--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHEL-ARKTEGYSGADISIIV 338 Query: 537 NEAALLAARR 566 ++ + R+ Sbjct: 339 RDSLMQPVRK 348
>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 119 bits (298), Expect = 7e-27 Identities = 72/190 (37%), Positives = 112/190 (58%), Gaps = 2/190 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAG-IPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 179 G+LL GPPGTGK+ LAKAVA EA FFS+S+S+ V ++G V++LF+ A+E P Sbjct: 169 GILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKP 228 Query: 180 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVK-VIVMAATNRPKALDSAL 356 SIIFIDE+D++ GSR + ++ + + L +M G D ++V+ ATN P LDSA+ Sbjct: 229 SIIFIDEIDSLCGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAI 288 Query: 357 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 536 R RF +++++ +P+ R + +HL +E + T G GAD++ IV Sbjct: 289 RR--RFEKRIYIPLPEAHARAAMFRLHLGSTQ-NSLTEADFQELGRKTDGYSGADISIIV 345 Query: 537 NEAALLAARR 566 +A + R+ Sbjct: 346 RDALMQPVRK 355
>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)| Length = 890 Score = 118 bits (295), Expect = 2e-26 Identities = 83/231 (35%), Positives = 118/231 (51%), Gaps = 27/231 (11%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G L AGPPGTGKTL+AKA++ EA P+ V S+F G ARV DLFK+ + +P Sbjct: 380 GYLFAGPPGTGKTLMAKAMSYEAETPYLYVEGSQFRCREEGVANARVDDLFKQIQNISPC 439 Query: 183 IIFIDELDAVGGSR------------------GRSFNDER---DQTLNQLLTEMDGFDSD 299 I++IDE+D++ R G + N ++ D L Q L MDG+ Sbjct: 440 ILYIDEIDSIAERREEANKQLEQLKTIGDSIEGSNINIDQKPSDTVLMQFLIYMDGYKKR 499 Query: 300 VKVIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIIC 479 +I++ ATNR + LD A+ RPGRF R++ P E R+ IL + LR D + Sbjct: 500 NDLIIIGATNRIETLDDAIMRPGRFDRQIVFSPPFFEERKDILRIFLRNTKALVD-DTTK 558 Query: 480 DLVANVTPGLVGADLANIVNEAALLAARRGGD-----IVAREDIMD-AIER 614 ++A + GL G DL + + LL+A + V ED D A+ER Sbjct: 559 TMMAERSIGLNGCDLRLLADNILLLSALESRNQQKTIPVINEDTFDRALER 609
>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 117 bits (294), Expect = 2e-26 Identities = 73/192 (38%), Positives = 114/192 (59%), Gaps = 4/192 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAG-IPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 179 G+LL GPPGTGK+ LAKAVA EA FFS+S+S+ V ++G V++LF+ A+E P Sbjct: 169 GILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKP 228 Query: 180 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVK-VIVMAATNRPKALDSAL 356 SIIFIDE+D++ GSR + ++ + + L +M G D ++V+ ATN P LDSA+ Sbjct: 229 SIIFIDEIDSLCGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAI 288 Query: 357 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDL--VANVTPGLVGADLAN 530 R RF +++++ +P+ R + +HL ++S D + T G GAD++ Sbjct: 289 RR--RFEKRIYIPLPEPHARAAMFKLHLGTT---QNSLTEADFRELGRKTDGYSGADISI 343 Query: 531 IVNEAALLAARR 566 IV +A + R+ Sbjct: 344 IVRDALMQPVRK 355
>SAP1_YEAST (P39955) Protein SAP1| Length = 897 Score = 117 bits (292), Expect = 4e-26 Identities = 76/215 (35%), Positives = 117/215 (54%), Gaps = 24/215 (11%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPGTGKT+LA+AVA E+ FFS+SAS ++G VR LF AK+ +PS Sbjct: 640 GMLLFGPPGTGKTMLARAVATESHSTFFSISASSLTSKYLGESEKLVRALFAIAKKLSPS 699 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTL-NQLL--------------------TEMDGFDSD 299 IIF+DE+D++ GSR +E + + N+ L ++ +G + D Sbjct: 700 IIFVDEIDSIMGSRNNENENESSRRIKNEFLVQWSSLSSAAAGSNKSNTNNSDTNGDEDD 759 Query: 300 VKVIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRR---KILAVHLRKVPLEEDSE 470 +V+V+AATN P ++D A R RF R+ ++ +P+ + R K L H + E D Sbjct: 760 TRVLVLAATNLPWSIDEAARR--RFVRRQYIPLPEDQTRHVQFKKLLSHQKHTLTESD-- 815 Query: 471 IICDLVANVTPGLVGADLANIVNEAALLAARRGGD 575 D + +T G G+D+ ++ +AA+ R GD Sbjct: 816 --FDELVKITEGYSGSDITSLAKDAAMGPLRDLGD 848
>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)| Length = 362 Score = 114 bits (286), Expect = 2e-25 Identities = 71/187 (37%), Positives = 106/187 (56%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPG GKT+LAKA+A E+G F S+ S ++ + G V +F A + P Sbjct: 128 GVLLYGPPGCGKTMLAKALAKESGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPC 187 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 IIFIDE+D+ R + ++ + +T DG ++ +V+++ ATNR +D A R Sbjct: 188 IIFIDEIDSFLRERSSTDHEVTATLKAEFMTLWDGLLNNGRVMIIGATNRINDIDDAFLR 247 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 542 R ++ V +P + R KIL+V L+ L+ED E L+A+ T G G+DL + E Sbjct: 248 --RLPKRFLVSLPGSDQRYKILSVLLKDTKLDED-EFDLQLIADNTKGFSGSDLKELCRE 304 Query: 543 AALLAAR 563 AAL AA+ Sbjct: 305 AALDAAK 311
>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B| Length = 362 Score = 114 bits (284), Expect = 3e-25 Identities = 80/221 (36%), Positives = 114/221 (51%), Gaps = 15/221 (6%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPG GKTL+AKA A EAG F ++ S + + G +F A + PS Sbjct: 132 GVLLYGPPGCGKTLIAKATAKEAGFRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPS 191 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSD--VKVIVMAATNRPKALDSAL 356 IIFIDE+D+ +R S ++ Q ++ DG D+D +VI+M ATNRP+ LDSA+ Sbjct: 192 IIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDYNCQVIIMGATNRPQDLDSAI 251 Query: 357 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 536 R R + + P++ R+ IL + L +E E+ +A T G G+DL + Sbjct: 252 LR--RMPTRFHINQPNVRQRKDILKLILENENVESAVEL--SEIAKQTDGFSGSDLREMC 307 Query: 537 NEAALLAARRGGDIV-------------AREDIMDAIEREK 620 +AALL R D V +ED+ AIE+ K Sbjct: 308 RDAALLCVR---DFVHQESPEEDFIRPIRQEDLQRAIEKMK 345
>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog| Length = 792 Score = 113 bits (283), Expect = 4e-25 Identities = 76/207 (36%), Positives = 112/207 (54%), Gaps = 19/207 (9%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAV-----AGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAK 167 G+LL GPPGTGKTL+A+ + A E I V+ E + +VG+ VR LF +A+ Sbjct: 306 GILLYGPPGTGKTLIARQIGKMLNAREPKI----VNGPEILNKYVGQSEENVRKLFADAE 361 Query: 168 --------EAAPSIIFIDELDAVGGSRGRSFNDER--DQTLNQLLTEMDGFDSDVKVIVM 317 E+ II DELDA+ RG S D DQ +NQLL +MDG D ++V+ Sbjct: 362 REYRDRGEESGLHIIIFDELDAICKKRGSSGGDTGVGDQVVNQLLAKMDGVDQLNNILVI 421 Query: 318 AATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVP----LEEDSEIICDL 485 TNR +D AL RPGR + + +PD GR +IL +H ++ LE D ++ + Sbjct: 422 GMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDVDM--EE 479 Query: 486 VANVTPGLVGADLANIVNEAALLAARR 566 +A++T GA++A ++ A+ A R Sbjct: 480 LASLTKNFSGAEIAGLIKSASSFAFYR 506 Score = 43.1 bits (100), Expect = 7e-04 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIPFFS-VSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 VLL+GP +GKT LA +A + PF VSA V M A V +F+++ ++ S Sbjct: 588 VLLSGPIASGKTALAATIALGSEFPFVKLVSAESMVGMNENARVAHVNRVFEDSYKSPLS 647 Query: 183 IIFIDELDAV 212 +I +DE++ + Sbjct: 648 VIVVDEIERI 657
>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1| Length = 361 Score = 113 bits (282), Expect = 5e-25 Identities = 73/189 (38%), Positives = 104/189 (55%), Gaps = 2/189 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPG GKTL+AKA A EAG F ++ S + + G +F A + PS Sbjct: 128 GVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPS 187 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSD--VKVIVMAATNRPKALDSAL 356 IIFIDE+D+ +R S ++ Q ++ DG D+D +VIVM ATNRP+ LDSA+ Sbjct: 188 IIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAI 247 Query: 357 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 536 R R + + P L+ R IL + L+ ++ +++ VA T G G+DL + Sbjct: 248 MR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLL--EVAQETDGFSGSDLKEMC 303 Query: 537 NEAALLAAR 563 +AALL R Sbjct: 304 RDAALLCVR 312
>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1| Length = 361 Score = 113 bits (282), Expect = 5e-25 Identities = 73/189 (38%), Positives = 104/189 (55%), Gaps = 2/189 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPG GKTL+AKA A EAG F ++ S + + G +F A + PS Sbjct: 128 GVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPS 187 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSD--VKVIVMAATNRPKALDSAL 356 IIFIDE+D+ +R S ++ Q ++ DG D+D +VIVM ATNRP+ LDSA+ Sbjct: 188 IIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAI 247 Query: 357 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 536 R R + + P L+ R IL + L+ ++ +++ VA T G G+DL + Sbjct: 248 MR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLL--EVAQETDGFSGSDLKEMC 303 Query: 537 NEAALLAAR 563 +AALL R Sbjct: 304 RDAALLCVR 312
>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1| Length = 361 Score = 113 bits (282), Expect = 5e-25 Identities = 73/189 (38%), Positives = 104/189 (55%), Gaps = 2/189 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPG GKTL+AKA A EAG F ++ S + + G +F A + PS Sbjct: 128 GVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPS 187 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSD--VKVIVMAATNRPKALDSAL 356 IIFIDE+D+ +R S ++ Q ++ DG D+D +VIVM ATNRP+ LDSA+ Sbjct: 188 IIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAI 247 Query: 357 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 536 R R + + P L+ R IL + L+ ++ +++ VA T G G+DL + Sbjct: 248 MR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLL--EVAQETDGFSGSDLKEMC 303 Query: 537 NEAALLAAR 563 +AALL R Sbjct: 304 RDAALLCVR 312
>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18| Length = 794 Score = 111 bits (278), Expect = 2e-24 Identities = 69/202 (34%), Positives = 111/202 (54%), Gaps = 14/202 (6%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEA-GIPFFSVSASEFVEMFVGRGAARVRDLFKEAK---- 167 G+LL GPPGTGKTL+A+ ++ G V+ E + +VG +R+LFK+A+ Sbjct: 312 GLLLYGPPGTGKTLIARKLSKMLNGKEPKIVNGPEMLSKYVGASEENIRNLFKDAEAEYK 371 Query: 168 ----EAAPSIIFIDELDAVGGSRGRSFNDER---DQTLNQLLTEMDGFDSDVKVIVMAAT 326 ++ +I DELD+V RG +D D +NQLL++MDG D ++V+ T Sbjct: 372 LKGEDSDLHVIIFDELDSVFKQRGSGKSDGTGVGDNVVNQLLSKMDGVDQLNNILVIGMT 431 Query: 327 NRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE--DSEIICDLVANVT 500 NR +D+AL RPGRF ++ + +PD +GR+ I +H +K+ S++ D ++ +T Sbjct: 432 NRLDLIDTALLRPGRFEIQIEISLPDEKGRKDIFLIHTKKLTENGILSSDVNFDELSTLT 491 Query: 501 PGLVGADLANIVNEAALLAARR 566 GA++ + N A A R Sbjct: 492 KNFTGAEIEGLCNSAKSYAISR 513 Score = 41.2 bits (95), Expect = 0.003 Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 3/94 (3%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIPFFS-VSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 +LL GPPG GKT +A +A + PF +SA V M R + ++F++ ++ + Sbjct: 596 ILLYGPPGVGKTSIATTLALNSDFPFIKMLSAETLVGMGELRKIQEIDNVFRDVHKSPLN 655 Query: 183 IIFIDELDAVGGSR--GRSFNDERDQTLNQLLTE 278 ++ ID+++ + G F+++ Q L LT+ Sbjct: 656 VLVIDKIENIINYNPIGPRFSNDILQVLMVYLTK 689
>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) Length = 742 Score = 110 bits (276), Expect = 3e-24 Identities = 78/220 (35%), Positives = 117/220 (53%), Gaps = 15/220 (6%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEA-GIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 179 G+LL GPPGTGKTL+A+ + G V+ E + FVG VRDLF +A++ Sbjct: 252 GMLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQR 311 Query: 180 S--------IIFIDELDAVGGSRG--RSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATN 329 + +I DE+DA+ SRG R D +NQLLT++DG ++ V+++ TN Sbjct: 312 TLGDASELHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVEALNNVLLIGMTN 371 Query: 330 RPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDL----VANV 497 R LD AL RPGR +V + +PD GR +IL +H K ++E+S + D+ +A Sbjct: 372 RKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNK--MKENSFLGTDINLQELAAR 429 Query: 498 TPGLVGADLANIVNEAALLAARRGGDIVAREDIMDAIERE 617 T GA+L +V A A R ++ +D+ +E E Sbjct: 430 TKNYSGAELEGVVKSATSYALNRQ---LSMDDLTKPVEEE 466 Score = 43.5 bits (101), Expect = 5e-04 Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 3/117 (2%) Frame = +3 Query: 9 LLAGPPGTGKTLLAKAVAGEAGIPFFS-VSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 185 LL GP G+GKT LA + ++ P+ VSA + + A + +F++A ++ SI Sbjct: 534 LLEGPSGSGKTALAATIGIDSDFPYVKIVSAETMIGLSESTKCAHIVKVFEDAYKSPMSI 593 Query: 186 IFIDELDAVGG--SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 350 I +D+++ + + G F++ QTL LL + K++V T+ L+S Sbjct: 594 IILDDIERLLEFIAIGPRFSNIISQTLMVLLKRLP--PKGKKLLVFGTTSEVTFLES 648
>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18| Length = 758 Score = 107 bits (268), Expect = 2e-23 Identities = 81/237 (34%), Positives = 122/237 (51%), Gaps = 35/237 (14%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAV-----AGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAK 167 G+LL GPPGTGKTL+A+ + A E I V+ E + +VG +R+LFK+A+ Sbjct: 276 GLLLYGPPGTGKTLIARKIGTMLNAKEPKI----VNGPEILSKYVGSSEENIRNLFKDAE 331 Query: 168 --------EAAPSIIFIDELDAV---GGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIV 314 E++ II DELD+V GSRG D +NQLL +MDG D ++V Sbjct: 332 AEYRAKGEESSLHIIIFDELDSVFKQRGSRGDG-TGVGDNVVNQLLAKMDGVDQLNNILV 390 Query: 315 MAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKV---PLEEDSEIICDL 485 + TNR +DSAL RPGRF +V + +PD +GR +I + +K+ + D + +L Sbjct: 391 IGMTNRKDLIDSALLRPGRFEVQVEIHLPDEKGRLQIFDIQTKKMRENNMMSDDVNLAEL 450 Query: 486 VANVTPGLVGADLANIVNEAALLAARRGGDI----------------VAREDIMDAI 608 A +T GA++ +V A+ A + +I V RED ++A+ Sbjct: 451 AA-LTKNFSGAEIEGLVKSASSFAINKTVNIGKGATKLNTKDIAKLKVTREDFLNAL 506 Score = 42.0 bits (97), Expect = 0.001 Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 1/70 (1%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIPFFS-VSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 +L+ GP G+GKT LA +A ++G PF +S +E M A + + F++A ++ + Sbjct: 560 LLIHGPAGSGKTALAAEIALKSGFPFIRLISPNELSGMSESAKIAYIDNTFRDAYKSPLN 619 Query: 183 IIFIDELDAV 212 I+ ID L+ + Sbjct: 620 ILVIDSLETL 629
>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive| fusion protein 1) (NEM-sensitive fusion protein 1) (dNsf-1) (Protein comatose) Length = 745 Score = 106 bits (264), Expect = 6e-23 Identities = 73/207 (35%), Positives = 112/207 (54%), Gaps = 19/207 (9%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAV-----AGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAK 167 G+LL GPPGTGKTL+A+ + A E I V+ + ++ +VG A VR LF EA+ Sbjct: 255 GILLYGPPGTGKTLMARQIGTMLNAREPKI----VNGPQILDKYVGESEANVRRLFAEAE 310 Query: 168 E--------AAPSIIFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGFDSDVKVIVM 317 E + II DE+DA+ RG + D +NQLLT++DG D ++V+ Sbjct: 311 EEEKRLGPNSGLHIIIFDEIDAICKQRGSVAGNSGVHDTVVNQLLTKIDGVDQLNNILVI 370 Query: 318 AATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDL---- 485 TNR +D AL RPGR ++ + +P+ +GR +IL +H ++ + E ++I D+ Sbjct: 371 GMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKR--MREFNKINDDVDNKE 428 Query: 486 VANVTPGLVGADLANIVNEAALLAARR 566 +A +T GA+L +V A A R Sbjct: 429 IAALTKNFSGAELEGLVRAAQSSAMNR 455 Score = 40.4 bits (93), Expect = 0.004 Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 3/117 (2%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIPFFSV-SASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 VL+AG P +GKT LA +A + PF V S + V +R +F +A + S Sbjct: 539 VLVAGAPNSGKTALAAQLAKMSDFPFVKVCSPEDMVGYTESAKCLHIRKIFDDAYRSMLS 598 Query: 183 IIFIDELDAV--GGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 347 I +D ++ + GS G +++ Q L LL + K++++ ++R + L+ Sbjct: 599 CIVVDNVERLLDYGSIGPRYSNMTLQALLVLLKKQP--PKGRKLLILCTSSRREVLE 653
>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) (SKD2 protein) Length = 744 Score = 105 bits (263), Expect = 8e-23 Identities = 70/205 (34%), Positives = 107/205 (52%), Gaps = 17/205 (8%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAV-----AGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAK 167 G+LL GPPG GKTLLA+ + A E + V+ E + +VG A +R LF +A+ Sbjct: 255 GILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGESEANIRKLFADAE 310 Query: 168 E--------AAPSIIFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGFDSDVKVIVM 317 E + II DE+DA+ RG D +NQLL+++DG + ++V+ Sbjct: 311 EEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVI 370 Query: 318 AATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE--DSEIICDLVA 491 TNRP +D AL RPGR K+ +G+PD +GR +IL +H ++ + +++ +A Sbjct: 371 GMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELA 430 Query: 492 NVTPGLVGADLANIVNEAALLAARR 566 T GA+L +V A A R Sbjct: 431 VETKNFSGAELEGLVRAAQSTAMNR 455 Score = 38.5 bits (88), Expect = 0.016 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIPFFSV-SASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 VLL GPP +GKT +A +A E+ PF + S + + ++ +F +A ++ S Sbjct: 539 VLLEGPPHSGKTAVAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598 Query: 183 IIFIDELD 206 + +D+++ Sbjct: 599 CVVVDDIE 606
>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 105 bits (263), Expect = 8e-23 Identities = 70/205 (34%), Positives = 107/205 (52%), Gaps = 17/205 (8%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAV-----AGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAK 167 G+LL GPPG GKTLLA+ + A E + V+ E + +VG A +R LF +A+ Sbjct: 255 GILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGESEANIRKLFADAE 310 Query: 168 E--------AAPSIIFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGFDSDVKVIVM 317 E + II DE+DA+ RG D +NQLL+++DG + ++V+ Sbjct: 311 EEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVI 370 Query: 318 AATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE--DSEIICDLVA 491 TNRP +D AL RPGR K+ +G+PD +GR +IL +H ++ + +++ +A Sbjct: 371 GMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELA 430 Query: 492 NVTPGLVGADLANIVNEAALLAARR 566 T GA+L +V A A R Sbjct: 431 VETKNFSGAELEGLVRAAQSTAMNR 455 Score = 39.7 bits (91), Expect = 0.007 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIPFFSV-SASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 VLL GPP +GKT LA +A E+ PF + S + + ++ +F +A ++ S Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598 Query: 183 IIFIDELD 206 + +D+++ Sbjct: 599 CVVVDDIE 606
>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 105 bits (263), Expect = 8e-23 Identities = 70/205 (34%), Positives = 107/205 (52%), Gaps = 17/205 (8%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAV-----AGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAK 167 G+LL GPPG GKTLLA+ + A E + V+ E + +VG A +R LF +A+ Sbjct: 255 GILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGESEANIRKLFADAE 310 Query: 168 E--------AAPSIIFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGFDSDVKVIVM 317 E + II DE+DA+ RG D +NQLL+++DG + ++V+ Sbjct: 311 EEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVI 370 Query: 318 AATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE--DSEIICDLVA 491 TNRP +D AL RPGR K+ +G+PD +GR +IL +H ++ + +++ +A Sbjct: 371 GMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELA 430 Query: 492 NVTPGLVGADLANIVNEAALLAARR 566 T GA+L +V A A R Sbjct: 431 VETKNFSGAELEGLVRAAQSTAMNR 455 Score = 39.7 bits (91), Expect = 0.007 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIPFFSV-SASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 VLL GPP +GKT LA +A E+ PF + S + + ++ +F +A ++ S Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598 Query: 183 IIFIDELD 206 + +D+++ Sbjct: 599 CVVVDDIE 606
>MSP1_CAEEL (P54815) Protein MSP1 homolog| Length = 342 Score = 105 bits (263), Expect = 8e-23 Identities = 69/188 (36%), Positives = 102/188 (54%), Gaps = 1/188 (0%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL GPPG GKTLLAKAVA AG F ++ S + + G +F A++ P+ Sbjct: 119 GILLYGPPGCGKTLLAKAVARAAGCRFINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPT 178 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSD-VKVIVMAATNRPKALDSALC 359 IIFIDE+D+ R ++ Q +T DGF S ++IVM ATNRP+ +D+A+ Sbjct: 179 IIFIDEIDSFLRDRQSHDHESTAMMKAQFMTLWDGFSSSGDQIIVMGATNRPRDVDAAIL 238 Query: 360 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 539 R R + + V VP+ + R +IL V LR + ++ + +A GL G+DL + Sbjct: 239 R--RMTARFQVPVPNAKQRSQILNVILRNEKI--NNTVNLGEIAQAAEGLSGSDLKEVCR 294 Query: 540 EAALLAAR 563 A L A+ Sbjct: 295 LALLARAK 302
>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 824 Score = 103 bits (256), Expect = 5e-22 Identities = 73/223 (32%), Positives = 113/223 (50%), Gaps = 21/223 (9%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAV-----AGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAK 167 G+LL GPPGTGKTL+A+ + A E I V+ + ++ +VG + VR LF +A+ Sbjct: 332 GILLFGPPGTGKTLMARQIGKMLNAREPKI----VNGPQILDKYVGESESNVRKLFADAE 387 Query: 168 E--------AAPSIIFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGFDSDVKVIVM 317 E + II DE+DA+ RG D +NQLL++MDG + ++V+ Sbjct: 388 EEWRRCGANSGLHIIIFDEIDAICKQRGSMAGSSSVHDTVVNQLLSKMDGVEQLNNILVI 447 Query: 318 AATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVP--LEEDSEIICDLVA 491 TNR +D AL RPGR ++ V +PD GR +IL +H ++ + D + + ++ Sbjct: 448 GMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQILKIHTARMREYNKMDPNVDLEDIS 507 Query: 492 NVTPGLVGADLANIVNEAALLAARR----GGDIVAREDIMDAI 608 T GA+L +V A A R GG A D ++ + Sbjct: 508 KRTKNFSGAELEGLVRAAQSSAMNRLVKAGGKAQADPDAIEKL 550 Score = 37.0 bits (84), Expect = 0.048 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIPFFSV-SASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 V+LAG TGKT LA +A + PF V S + V ++ F++AK + S Sbjct: 616 VVLAGAAKTGKTSLAAQMAKSSDFPFVKVISPEDTVGFSESAKCMALKKAFEDAKRSKLS 675 Query: 183 IIFIDELD 206 ++ ID L+ Sbjct: 676 VLLIDNLE 683
>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive| fusion protein 2) (NEM-sensitive fusion protein 2) (dNsf-2) Length = 752 Score = 102 bits (254), Expect = 9e-22 Identities = 69/207 (33%), Positives = 111/207 (53%), Gaps = 19/207 (9%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAV-----AGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAK 167 G+LL GPPGTGKTL+A+ + A E I V+ + ++ +VG A +R LF EA+ Sbjct: 260 GILLYGPPGTGKTLMARQIGTMLNAREPKI----VNGPQILDKYVGESEANIRRLFAEAE 315 Query: 168 E--------AAPSIIFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGFDSDVKVIVM 317 E + II DE+DA+ +RG + D +NQLL ++DG + ++V+ Sbjct: 316 EEEKRLGPNSGLHIIIFDEIDAICKARGSVAGNSGVHDTVVNQLLAKIDGVEQLNNILVI 375 Query: 318 AATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDL---- 485 TNR +D AL RPGR ++ + +P+ +GR +IL +H ++ + + ++I D+ Sbjct: 376 GMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKR--MRDFNKIASDVDNNE 433 Query: 486 VANVTPGLVGADLANIVNEAALLAARR 566 +A T GA+L +V A A R Sbjct: 434 IAAKTKNFSGAELEGLVRAAQSTAMNR 460 Score = 34.3 bits (77), Expect = 0.31 Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 3/117 (2%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIPFFSV-SASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 VL+ G P +GK+ LA +A + PF V S + V +R +F +A + S Sbjct: 544 VLIEGAPNSGKSALAANLAQLSDFPFVKVCSPEDMVGFTESAKCLHIRKIFDDAYRSTLS 603 Query: 183 IIFIDELDAV--GGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 347 I +D ++ + G G +++ Q L LL + K++++ ++R L+ Sbjct: 604 CIVVDNVERLLDYGPIGPRYSNLTLQALLVLLKKQP--PKGRKLLILCTSSRRDVLE 658
>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c| Length = 609 Score = 101 bits (251), Expect = 2e-21 Identities = 64/175 (36%), Positives = 96/175 (54%), Gaps = 21/175 (12%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAG---------------EAGIPFFSVSASEFVEMFVGRGAA 137 GVLL GPPG GKTL+AKAVA EA F ++ E + FVG Sbjct: 288 GVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETER 347 Query: 138 RVRDLFKEAKEAA----PSIIFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDGFDSDV 302 +R +F+ A+E A P I+F DE+D++ +RG + + + T+ QLL+E+DG + Sbjct: 348 HIRLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGVSSDVETTVVPQLLSEIDGVEGLE 407 Query: 303 KVIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRK-VPLEED 464 VIV+ A+NR +D A+ RPGR K+ + PD E + I + +L + +P+ D Sbjct: 408 NVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTEFLPVHAD 462
>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175| Length = 609 Score = 101 bits (251), Expect = 2e-21 Identities = 64/175 (36%), Positives = 96/175 (54%), Gaps = 21/175 (12%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAG---------------EAGIPFFSVSASEFVEMFVGRGAA 137 GVLL GPPG GKTL+AKAVA EA F ++ E + FVG Sbjct: 288 GVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETER 347 Query: 138 RVRDLFKEAKEAA----PSIIFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDGFDSDV 302 +R +F+ A+E A P I+F DE+D++ +RG + + + T+ QLL+E+DG + Sbjct: 348 HIRLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGVSSDVETTVVPQLLSEIDGVEGLE 407 Query: 303 KVIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRK-VPLEED 464 VIV+ A+NR +D A+ RPGR K+ + PD E + I + +L + +P+ D Sbjct: 408 NVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTEFLPVHAD 462
>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316| Length = 609 Score = 101 bits (251), Expect = 2e-21 Identities = 64/175 (36%), Positives = 95/175 (54%), Gaps = 21/175 (12%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAG---------------EAGIPFFSVSASEFVEMFVGRGAA 137 GVLL GPPG GKTL+AKAVA EA F ++ E + FVG Sbjct: 288 GVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAREAKSYFLNIKGPELLNKFVGETER 347 Query: 138 RVRDLFKEAKEAA----PSIIFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDGFDSDV 302 +R +F+ A+E A P I+F DE+D++ +RG + + + T+ QLL+E+DG + Sbjct: 348 HIRLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGVSSDVETTVVPQLLSEIDGVEGLE 407 Query: 303 KVIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHL-RKVPLEED 464 VIV+ A+NR +D A+ RPGR K+ + PD E + I + +L +P+ D Sbjct: 408 NVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTESLPVHAD 462
>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A| Length = 380 Score = 95.9 bits (237), Expect = 9e-20 Identities = 64/189 (33%), Positives = 100/189 (52%), Gaps = 2/189 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 GVLL GPPG GKTL+AKA A +G F ++ AS + + G +F A + P Sbjct: 131 GVLLYGPPGCGKTLIAKATAKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPC 190 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDS--DVKVIVMAATNRPKALDSAL 356 IIF+DE+D+ +R ++ Q ++ DG D+ + +V+VM ATNRP+ +D+A+ Sbjct: 191 IIFLDEIDSFLRNRSSMDHEATAMMKAQFMSLWDGLDTGENSQVMVMGATNRPQDVDAAI 250 Query: 357 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 536 R R VG+P+ R +IL + L L + I +A+ + G G+DL + Sbjct: 251 LR--RMPTAFHVGLPNAAQREEILRLILSGENL--SNAINLKEIASQSEGYSGSDLKELC 306 Query: 537 NEAALLAAR 563 +AA+ R Sbjct: 307 RDAAMYRVR 315
>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46| Length = 506 Score = 95.1 bits (235), Expect = 1e-19 Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 1/205 (0%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL G GTGK+L AK++A E +P + +G ARVR + + A+ +P Sbjct: 277 GLLLVGIQGTGKSLTAKSIANEWNLPLLKLDVGRLFGGIIGESEARVRQMIQFAETISPC 336 Query: 183 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGF-DSDVKVIVMAATNRPKALDSALC 359 I++IDE+D G +FN++ T T + + V V+A N +L L Sbjct: 337 ILWIDEIDK--AFTGSNFNNDSGTTKRVFGTFITWLSEKKSPVFVVATANNIDSLPPELL 394 Query: 360 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 539 R GRF F+G+PDL+ R I VHL+K+ + S ++++ + GA++ + Sbjct: 395 RKGRFDEVFFIGLPDLKERECIFKVHLKKIRPKSWSTYDTEILSAQSNRFSGAEIEESIY 454 Query: 540 EAALLAARRGGDIVAREDIMDAIER 614 EA +A + DI+++++R Sbjct: 455 EAMHIAFNENREFTT-SDILNSLKR 478
>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)| Length = 497 Score = 79.3 bits (194), Expect = 8e-15 Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 4/185 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL G GTGK+L AKA+A E +P + VG +R+R + A+ +P Sbjct: 261 GLLLIGIQGTGKSLTAKAIATEWQLPLLKLDVGRLFGGIVGESESRLRQMIDVAETLSPC 320 Query: 183 IIFIDELDAVGGSRGRSFNDERDQ--TLNQLLTEMDGFDSD--VKVIVMAATNRPKALDS 350 I++IDE+D + S ND R T N++L + S+ V V+A N L Sbjct: 321 ILWIDEMD-----KAFSNNDSRGDSGTSNRVLATFISWLSEKTKPVFVVATANNVDLLPL 375 Query: 351 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 530 + R GRF F+ +P+LE R++I +H+++ +A ++ GA++ Sbjct: 376 EIIRKGRFDEIFFLDLPELEERKEIFKIHIQEFRPNSWKLFDYKKLAQLSESFSGAEIRQ 435 Query: 531 IVNEA 545 + EA Sbjct: 436 SIIEA 440
>Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL| Length = 330 Score = 79.3 bits (194), Expect = 8e-15 Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 1/154 (0%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 185 +L GPPG GKTL A+ A E G+P F V + ++G A +R F+ A++ P + Sbjct: 121 MLFCGPPGCGKTLCAEIFAAELGLPLFRVKLDRLISSYLGETATNIRKTFEFARK-QPCV 179 Query: 186 IFIDELDAVGGSRGRS-FNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 362 +F DE DA+ +R S ++E + +N LL +D K ++AATN ++LD+A+ R Sbjct: 180 LFFDEFDALARTRDDSGEHNELRRVVNSLLLFIDNMQP--KGFLIAATNLDRSLDAAIWR 237 Query: 363 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEED 464 RF ++ P+ + L + + VP+ D Sbjct: 238 --RFDEVLWFDRPEAAMIGRFLKLKFKNVPVAFD 269
>FTSH_CHLVU (P56369) Cell division protein ftsH homolog| Length = 1720 Score = 73.9 bits (180), Expect = 4e-13 Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 1/99 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAA-RVRDLFKEAKEAAP 179 G+LL GPPGTGKTLL +A+AGEA +P +S S +E G AA +++ +F+EA++ AP Sbjct: 1009 GILLTGPPGTGKTLLVQALAGEAQVPVIVLSGSSLME--PGESAAFKLQLVFQEARQLAP 1066 Query: 180 SIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDS 296 I+FIDE+D + + +R Q L + GF+S Sbjct: 1067 CIVFIDEID--------TLSSKRSQLLQNPMANDPGFES 1097 Score = 68.6 bits (166), Expect = 1e-11 Identities = 41/107 (38%), Positives = 62/107 (57%) Frame = +3 Query: 237 NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGR 416 N+++ L+QLL E+DG V++ ATNRP+ LD AL RPGRF + V VG+P + R Sbjct: 1148 NEKQVSLLSQLLIELDGIQGRNGVVIFGATNRPEVLDPALLRPGRFDKIVKVGLPAQKKR 1207 Query: 417 RKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLA 557 +IL + + + ++ + T G ADLA ++NE+AL A Sbjct: 1208 VEILQFYGQTLGYQK--TMPWAYFGERTVGFTAADLATLMNESALKA 1252
>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)| Length = 491 Score = 71.6 bits (174), Expect = 2e-12 Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 3/152 (1%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G+LL G GTGK+L AKA+A + +P + + VG +R+R++ A+ +P Sbjct: 261 GLLLVGIQGTGKSLTAKAIANDWTLPLLRLDIGKLFGGLVGESESRMREMVTIAEGLSPC 320 Query: 183 IIFIDELDAVGG---SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 353 +++IDE+D S+G S R +T + + V V+A N + L S Sbjct: 321 VLWIDEIDKAFSNLYSQGDSGTSAR--VFGTFITWLS--EKTTPVFVVATANTIQNLPSE 376 Query: 354 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKV 449 + R GRF F+ +P+ E R I +HL ++ Sbjct: 377 MLRKGRFDEIFFLDLPNNEERELIFQIHLARI 408
>BCS1_YEAST (P32839) Mitochondrial chaperone BCS1| Length = 456 Score = 68.9 bits (167), Expect = 1e-11 Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 4/135 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEA--GIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 176 G LL GPPG+GKT +A+AGE I ++S + + R+ L E Sbjct: 262 GYLLYGPPGSGKTSFIQALAGELDYNICILNLSENNLTD-------DRLNHLMNNMPER- 313 Query: 177 PSIIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 350 SI+ ++++DA R ++ T + LL +DG S + I TN P+ LD+ Sbjct: 314 -SILLLEDIDAAFNKRSQTGEQGFHSSVTFSGLLNALDGVTSSEETITFMTTNHPEKLDA 372 Query: 351 ALCRPGRFSRKVFVG 395 A+ RPGR KVFVG Sbjct: 373 AIMRPGRIDYKVFVG 387
>ATD3B_HUMAN (Q5T9A4) ATPase family AAA domain-containing protein 3B| Length = 648 Score = 63.9 bits (154), Expect = 4e-10 Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 17/217 (7%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGR-GAARVRDLFKEAKEAAPS 182 +LL GPPGTGKTL AK +A +G+ + ++ + M GR G + LF A + Sbjct: 348 ILLYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPM--GREGVTAMHKLFDWANTSRRG 405 Query: 183 -IIFIDELDAVGGSRG-RSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 356 ++F+DE DA R + + TLN L M + K +++ A+N P+ D A+ Sbjct: 406 LLLFMDEADAFLRKRATEEISKDLRATLNAFLYHMGQHSN--KFMLVLASNLPEQFDCAI 463 Query: 357 CRPGRFSRKVFVGVPDLEGRRKILAVHL------------RKVPLEE-DSEIICDLVANV 497 R V +P E R +++ +H R++ L + D C VA + Sbjct: 464 --NSRIDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARL 521 Query: 498 TPGLVGADLANI-VNEAALLAARRGGDIVAREDIMDA 605 T G+ G ++A + V+ A A + G V E +MDA Sbjct: 522 TEGMSGREIAQLAVSWQATAYASKDG--VLTEAMMDA 556
>BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 449 Score = 63.9 bits (154), Expect = 4e-10 Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 4/163 (2%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G LL GPPG+GKT A+AGE ++ +E G R+ L A Sbjct: 244 GYLLYGPPGSGKTSFLYALAGELDYDICVLNLAE-----KGLTDDRLNHLLSNVPPKA-- 296 Query: 183 IIFIDELDAVGGSRGRS--FNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 356 ++ ++++D+ R RS + T + LL +DG S + I+ TN P+ LD AL Sbjct: 297 VVLLEDVDSAFQGRERSGEVGFHANVTFSGLLNALDGVTSSDERIIFMTTNHPEKLDPAL 356 Query: 357 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEED--SEIIC 479 RPGR K ++G E R++ P D S+I+C Sbjct: 357 VRPGRVDVKAYLGNATPEQVREMFTRFYGHSPEMADDLSDIVC 399
>AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)| Length = 69 Score = 63.9 bits (154), Expect = 4e-10 Identities = 31/69 (44%), Positives = 46/69 (66%), Gaps = 2/69 (2%) Frame = +3 Query: 306 VIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE--DSEIIC 479 V+V+A TNRP LD AL RPGRF R+++ G P ++GR I VHLR + L++ + + + Sbjct: 1 VVVLAGTNRPDVLDPALMRPGRFHRQIYTGPPYIKGRSSIFKVHLRPLKLDKSLNKDTLA 60 Query: 480 DLVANVTPG 506 +A +TPG Sbjct: 61 RKLAVLTPG 69
>ATAD3_MOUSE (Q925I1) ATPase family AAA domain-containing protein 3 (AAA-ATPase| TOB3) Length = 591 Score = 63.2 bits (152), Expect = 6e-10 Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 16/216 (7%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGR-GAARVRDLFKEAKEAAPS 182 VL+ GPPGTGKTL AK +A +G+ + ++ + M GR G + +F A + Sbjct: 347 VLMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPM--GREGVTAMHKVFDWASTSRRG 404 Query: 183 -IIFIDELDAVGGSRG-RSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 356 ++F+DE DA R +++ TLN L S K +++ A+N+P+ D A+ Sbjct: 405 LLLFVDEADAFLRKRATEKISEDLRATLNAFLHRTGQHSS--KFMLVLASNQPEQFDWAI 462 Query: 357 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSE-------------IICDLVANV 497 R V +P E R +++ ++ K L+ +E C VA + Sbjct: 463 --NDRIDEMVCFALPQREERERLVRMYFDKYVLKPATEGKQRLKVAQFDYGKKCSEVAQL 520 Query: 498 TPGLVGADLANIVNEAALLAARRGGDIVAREDIMDA 605 T G+ G ++A + A A D V E +MDA Sbjct: 521 TEGMSGREIAQLA-VAWQAMAYSSEDGVLTEAMMDA 555
>YCF2_ANTFO (Q859W7) Protein ycf2| Length = 2392 Score = 62.4 bits (150), Expect = 1e-09 Identities = 54/226 (23%), Positives = 105/226 (46%), Gaps = 18/226 (7%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFV--------EMFVG---RGAARVRD 149 G+LL GP GK+ L K +A ++ +P +S S+ + E ++ R+ Sbjct: 1653 GILLVGPTEIGKSYLIKNLAADSYVPLIKISISKLLYNKPDVITESWINILMESLQRLTL 1712 Query: 150 LFKEAKEAAPSIIFIDELDAVGGSRGRSFNDERDQT------LNQLLTEMDGFDSDVKVI 311 + + AK+ +P II+I ++ + +R N E D T L TE S +I Sbjct: 1713 ILELAKKMSPCIIWIQDIHELNVNRSTE-NVESDPTFLLGILLKYFHTEFIS-KSTKGII 1770 Query: 312 VMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEII-CDLV 488 ++ +T+ P+ +D AL P R + + + + D+ R++ ++ L ++++ + Sbjct: 1771 IIGSTHLPRKVDPALISPNRLDKLMNIRIIDIFERQEKFSILLHSKRFYFKNKLLHFNEF 1830 Query: 489 ANVTPGLVGADLANIVNEAALLAARRGGDIVAREDIMDAIEREKYG 626 A T G G DL + NE +L+ +G + + + A+ R+ G Sbjct: 1831 AYRTMGYNGRDLVALANEVSLINTTQGNSTIYIDAVRLALHRQTLG 1876
>YCF2_PINTH (P41653) Protein ycf2| Length = 2054 Score = 61.6 bits (148), Expect = 2e-09 Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 24/229 (10%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSA-----SEFVEMFVGRGAARVRDLFKE-- 161 G+LL GP GTG++ L K++A ++ +P +S E+++ + R K+ Sbjct: 1372 GILLIGPMGTGRSYLVKSLAADSYVPLIRISLKKLWYGEYLDYPLERIPTEFDPFVKDKM 1431 Query: 162 ---------AKEAAPSIIFIDEL------DAVGGSRGRSFND-ERDQTLNQLLTEMDG-F 290 AK +P II+I + DA G F D +N L DG Sbjct: 1432 EDFHITLELAKRMSPCIIWIPNIHELNLNDATNYLFGFGFTDLFLSVLMNNLFRFRDGEK 1491 Query: 291 DSDVKVIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSE 470 DS ++V+A+T+ P+ +D AL P R R + + + + R++ + L L S Sbjct: 1492 DSMRNILVIASTHIPQRVDPALIAPNRLDRSINIRMLVIPQRQREFPILLCSKGLY--SV 1549 Query: 471 IICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVAREDIMDAIERE 617 D ++T DLA + +EA +L+ R ++ I AI R+ Sbjct: 1550 KFPDEFGSITIDYAVRDLAALADEALILSITRNKSVIDTNTIRSAIYRQ 1598
>YCF2_MARPO (P09975) Protein ycf2| Length = 2136 Score = 61.2 bits (147), Expect = 2e-09 Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 17/225 (7%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFV--------EMFVG---RGAARVRD 149 G+LL GP TG++ L K +A E+ +P F +S ++ + E ++ R+ Sbjct: 1399 GILLIGPIETGRSYLIKNLAAESYVPLFKISINKLLYNKPDVITESWMNILIESLRRLNL 1458 Query: 150 LFKEAKEAAPSIIFIDELDAVGGSRGRSFNDERDQT--LNQLLTEMDGFDSDVK---VIV 314 AK+ +P II+I + + +R + N E D T L LL S K +IV Sbjct: 1459 TLDFAKKMSPCIIWIQNIHQLNVNR-LTQNVESDPTFLLGILLKYFQTDFSKTKKNNIIV 1517 Query: 315 MAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLE-EDSEIICDLVA 491 + +T+ PK +D AL P R + + V + ++ R+K + L+K + +++ + Sbjct: 1518 IGSTHLPKKVDPALISPNRLDKIINVRLFNISQRKKQFPLLLKKKNFQLKENLFFLNEFG 1577 Query: 492 NVTPGLVGADLANIVNEAALLAARRGGDIVAREDIMDAIEREKYG 626 + T G DL+ + NE L++ + + + + A R+ +G Sbjct: 1578 SRTMGYNLRDLSALTNEVLLISITKNRSFIDTDTLKLAFHRQIFG 1622
>ATD3A_HUMAN (Q9NVI7) ATPase family AAA domain-containing protein 3A| Length = 634 Score = 61.2 bits (147), Expect = 2e-09 Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 17/216 (7%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGR-GAARVRDLFKEAKEAAPS 182 +L+ GPPGTGKTL AK +A +G+ + ++ + M GR G + LF A + Sbjct: 396 ILMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPM--GREGVTAMHKLFDWANTSRRG 453 Query: 183 -IIFIDELDAVGGSRG-RSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 356 ++F+DE DA R +++ TLN L + K +++ A+N+P+ D A+ Sbjct: 454 LLLFVDEADAFLRKRATEKISEDLRATLNAFLYRTGQHSN--KFMLVLASNQPEQFDWAI 511 Query: 357 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSE-------------IICDLVANV 497 R + V +P E R +++ ++ K L+ +E C VA + Sbjct: 512 --NDRINEMVHFDLPGQEERERLVRMYFDKYVLKPATEGKQRLKLAQFDYGRKCSEVARL 569 Query: 498 TPGLVGADLANI-VNEAALLAARRGGDIVAREDIMD 602 T G+ G ++A + V+ A A G V E +MD Sbjct: 570 TEGMSGREIAQLAVSWQATAYASEDG--VLTEAMMD 603
>YCF2_PINKO (Q85WV5) Protein ycf2| Length = 1320 Score = 60.1 bits (144), Expect = 5e-09 Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 24/226 (10%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFV--EMFVGRGAARV--------RD- 149 G+LL GP GTG++ L K++A ++ +P +S + + + R+ RD Sbjct: 625 GILLIGPMGTGRSYLIKSLAADSYVPLIRISLKKLLYGKFLYYPDPGRIPTEFNTFWRDT 684 Query: 150 ------LFKEAKEAAPSIIFIDEL------DAVGGSRGRSFNDERDQTLNQLLTEMDGFD 293 F+ AK +P II+I + D + G F D L ++ D Sbjct: 685 IDHFHITFELAKRMSPCIIWIPNIHELNVNDTITHLFGLGFTDSFLGLLLNYISRGGEKD 744 Query: 294 SDVKVIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEI 473 S ++ +A+T+ P+ +D AL P R + + + + R++ + L L + E+ Sbjct: 745 SIRNILFIASTHIPQRVDPALIAPNRLDSSINIRMLVIPQRQREFPILLCSKGLYSEKEV 804 Query: 474 IC-DLVANVTPGLVGADLANIVNEAALLAARRGGDIVAREDIMDAI 608 C D ++T DLA + NEA + + R ++ I AI Sbjct: 805 SCPDEFGSITIDSDARDLAALANEALITSITRKKSVIDTNTIRYAI 850
>BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 420 Score = 56.6 bits (135), Expect = 6e-08 Identities = 47/138 (34%), Positives = 63/138 (45%), Gaps = 7/138 (5%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 182 G LL GPPG GK+ A+AGE G +S S+ R+ L A + S Sbjct: 225 GYLLYGPPGCGKSSFITALAGELGYSICLMSLSDR-----SLSDDRLNHLLSVAPQQ--S 277 Query: 183 IIFIDELDAVGGSRGR-------SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKA 341 II ++++DA SR ++ T + LL +DG S IV TN + Sbjct: 278 IILLEDVDAAFVSRELLPTENPLAYQGMGRLTFSGLLNALDGVASSEARIVFMTTNFIER 337 Query: 342 LDSALCRPGRFSRKVFVG 395 LD AL RPGR K +VG Sbjct: 338 LDPALVRPGRVDLKQYVG 355
>YCF2_ADICA (Q85B60) Protein ycf2| Length = 2104 Score = 55.8 bits (133), Expect = 1e-07 Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 18/223 (8%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFV----------EMFVGRGAA-RVRD 149 G+LL GP TG++ L + VA + P + +F+ F+ + + R+ Sbjct: 1391 GILLVGPVETGRSSLIRDVASNSYFPVVKLPLKKFIYNRSFFNNVRGNFISKESVHRLNI 1450 Query: 150 LFKEAKEAAPSIIFIDELDAVGGSRGRSFND-ERDQ--TLNQLLTEMDG--FDSDVKV-I 311 +F+ AKE +P ++I ++ + + RS+N E D L Q+L + +SD++ + Sbjct: 1451 VFEIAKEMSPCTLWIQDIHEL--NICRSYNKLEADPKFLLCQILKSIGHKLGNSDIRENV 1508 Query: 312 VMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSE-IICDLV 488 V+A T+ P +D AL P R ++ + + R+K L++ LR E + + + Sbjct: 1509 VIATTHVPARIDPALVAPNRLNQLINFRRSNGRQRQKELSILLRIKGFEVGANPTLLEST 1568 Query: 489 ANVTPGLVGADLANIVNEAALLAARRGGDIVAREDIMDAIERE 617 + T G DL + NEA L+ +G V I A+ R+ Sbjct: 1569 VSGTAGYSKRDLLLLANEALLIGTSKGRKFVCSNTIGLALHRQ 1611
>BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 419 Score = 55.1 bits (131), Expect = 2e-07 Identities = 46/139 (33%), Positives = 61/139 (43%), Gaps = 8/139 (5%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP- 179 G LL GPPG GK+ A+AGE +S S+ ++ D AP Sbjct: 225 GYLLYGPPGCGKSSFITALAGELEYSICLMSLSD---------SSLSDDRLNHLLSVAPQ 275 Query: 180 -SIIFIDELDAVGGSRG------RSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPK 338 SII ++++DA SR ++ T + LL +DG S IV TN Sbjct: 276 QSIILLEDVDAAFVSRDLNKQNPTAYQGMGRLTFSGLLNALDGVASTEARIVFMTTNHID 335 Query: 339 ALDSALCRPGRFSRKVFVG 395 LD AL RPGR K +VG Sbjct: 336 RLDPALIRPGRVDVKQYVG 354
>YCF2_PHYPA (P61243) Protein ycf2| Length = 2259 Score = 54.3 bits (129), Expect = 3e-07 Identities = 52/228 (22%), Positives = 102/228 (44%), Gaps = 20/228 (8%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFV--------EMFVG---RGAARVRD 149 G+LL G TG++ L K +A + IP +S ++ + E ++ R+ Sbjct: 1551 GILLIGSQETGRSYLVKNLAANSFIPLIKISINKLLYNKPDILTESWINILMESLRRLNL 1610 Query: 150 LFKEAKEAAPSIIFIDELDAVGGSRGRSFNDERDQTLNQ---LLTEMDGFD--SDVKVIV 314 + + A++ +P II++ + + +R N E D T L GF + +I+ Sbjct: 1611 ILELAEKLSPCIIWMPNIHELNVNRSTQ-NVESDPTFLLGIFLKYFQTGFSKKNTNNIII 1669 Query: 315 MAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHL----RKVPLEEDSEIICD 482 + +T+ PK +D AL P R R + + ++ R+K +++ L K + + + Sbjct: 1670 IGSTHLPKKVDPALISPNRLDRLINIRTFNILQRQKKISILLYSKYSKYFYSKKKKSSLN 1729 Query: 483 LVANVTPGLVGADLANIVNEAALLAARRGGDIVAREDIMDAIEREKYG 626 + T G DLA ++NE L++ + + ++ I A R+ G Sbjct: 1730 EFGSRTIGYNARDLAGLINEILLISINQNQSTIQKKTIRLAFHRQTLG 1777
>BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like protein) (H-BCS1)| Length = 419 Score = 53.1 bits (126), Expect = 6e-07 Identities = 47/139 (33%), Positives = 65/139 (46%), Gaps = 8/139 (5%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEA--GIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 176 G LL GPPG GK+ A+AGE I S++ S + R+ L A + Sbjct: 225 GYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSD-------DRLNHLLSVAPQQ- 276 Query: 177 PSIIFIDELDAVGGSRGRSF-NDERDQ-----TLNQLLTEMDGFDSDVKVIVMAATNRPK 338 S++ ++++DA SR + N + Q T + LL +DG S IV TN Sbjct: 277 -SLVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFSGLLNALDGVASTEARIVFMTTNHVD 335 Query: 339 ALDSALCRPGRFSRKVFVG 395 LD AL RPGR K +VG Sbjct: 336 RLDPALIRPGRVDLKEYVG 354
>PCH2_YEAST (P38126) Pachytene checkpoint protein 2| Length = 536 Score = 52.0 bits (123), Expect = 1e-06 Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 29/181 (16%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIP-----------------FFSVSASEFVEMFVGRGA 134 +L+ GPPGTGKT L KA+ + + +S + + G + Sbjct: 310 LLVHGPPGTGKTTLCKALCQKLSVRREFSDGSDTIDTNYKGIIIELSCARIFSKWFGESS 369 Query: 135 ARVRDLFKEAKEAAP--------SIIFIDELDAVGGSRGR--SFNDERD--QTLNQLLTE 278 + +FK+ +E + IDE++A+ SR S N+ D + +N LLT+ Sbjct: 370 KNISIVFKDIEELLKVNEGRGIFICLLIDEVEAIASSRTNLSSRNESTDGIRVVNTLLTQ 429 Query: 279 MDGFDSDVKVIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLE 458 +D + +A +N +LD A R +VG P EG +H+ KV +E Sbjct: 430 LDRLKKYHNFLALATSNLLDSLDDAFV--DRADGVFYVGNPTAEG-----ILHILKVCIE 482 Query: 459 E 461 E Sbjct: 483 E 483
>PCH2_CAEEL (Q09535) Putative pachytene checkpoint protein 2| Length = 424 Score = 51.6 bits (122), Expect = 2e-06 Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 21/180 (11%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGI---------PFFSVSASEFVEMFVGRGAARVRDLFK 158 +LL GPPGTGKT L K +A I +++ + V+ +F Sbjct: 175 ILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINSHSLFSKWFSESGKLVQKMFD 234 Query: 159 EAKEAAPS-----IIFIDELDAVG----GSRGRSFNDERDQTLNQLLTEMDGFDSDVKVI 311 + E A + IDE++++G S RS + + +N LLT++D V+ Sbjct: 235 QIDELAEDEKCMVFVLIDEVESLGMCRESSSSRSEPSDAIRAVNALLTQIDRIRRRDNVL 294 Query: 312 VMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKIL---AVHLRKVPLEEDSEIICD 482 ++ +N LD AL + VG P R +L + L ++ + D+E+ D Sbjct: 295 ILCTSNLESTLDKALVDRADIVKN--VGQPSDFARYSMLKSSIMELARIGVVIDNEVHTD 352
>BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 418 Score = 51.6 bits (122), Expect = 2e-06 Identities = 45/139 (32%), Positives = 63/139 (45%), Gaps = 8/139 (5%) Frame = +3 Query: 3 GVLLAGPPGTGKTLLAKAVAGEA--GIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA 176 G LL GPPG GK+ A+AGE I S++ S + R+ L A + Sbjct: 225 GYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSD-------DRLNHLLSVAPQQ- 276 Query: 177 PSIIFIDELDAVGGSRGRSFNDERDQ------TLNQLLTEMDGFDSDVKVIVMAATNRPK 338 S++ ++++DA SR + + T + LL +DG S IV TN Sbjct: 277 -SLVLLEDVDAAFLSRDLAVENPIKYQGLGRLTFSGLLNALDGVASTEARIVFMTTNYID 335 Query: 339 ALDSALCRPGRFSRKVFVG 395 LD AL RPGR K +VG Sbjct: 336 RLDPALIRPGRVDLKEYVG 354
>CLPX_TREDE (Q73M37) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 415 Score = 49.7 bits (117), Expect = 7e-06 Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 6/75 (8%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEM-FVGRGAAR-----VRDLFKEAK 167 VLL GP G+GKTLLAK +A + +PF A+ E +VG +++ + K Sbjct: 112 VLLLGPTGSGKTLLAKTLAQKMQVPFAIADATTLTEAGYVGEDVENILLKLIQNANGDIK 171 Query: 168 EAAPSIIFIDELDAV 212 EA IIFIDE+D + Sbjct: 172 EAEMGIIFIDEIDKI 186
>CLPX_PORGI (Q7MX10) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 411 Score = 47.8 bits (112), Expect = 3e-05 Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 6/75 (8%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEM-FVGRGAARVRDLFKEA-----K 167 +++ GP GTGKTLLA+ +A +PF V A+ E +VG + +A K Sbjct: 114 IIMVGPTGTGKTLLARTIAKMLHVPFAVVDATVLTEAGYVGEDIESILTRLLQAADYDVK 173 Query: 168 EAAPSIIFIDELDAV 212 +A I+FIDE+D + Sbjct: 174 QAERGIVFIDEIDKI 188
>CLPX2_WOLSU (Q7M8U5) ATP-dependent Clp protease ATP-binding subunit clpX 2| Length = 397 Score = 47.8 bits (112), Expect = 3e-05 Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 6/88 (6%) Frame = +3 Query: 6 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEM-FVGRGAARVRDLFKEA-----K 167 +LL GP G+GKTLLAK +A IPF A+ E +VG + A + Sbjct: 106 ILLLGPSGSGKTLLAKTLARVLNIPFAMSDATALTEAGYVGEDVESILSRLLHAASFDIE 165 Query: 168 EAAPSIIFIDELDAVGGSRGRSFNDERD 251 +A I++IDE+D + +G S RD Sbjct: 166 KAQKGIVYIDEIDKI-AKKGESVQSGRD 192 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,801,425 Number of Sequences: 219361 Number of extensions: 2003672 Number of successful extensions: 11093 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 9867 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10587 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5767334219 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
