ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd27d17 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 361 bits (182), Expect = 9e-97 Identities = 209/218 (95%) Strand = Plus / Plus Query: 97 cggcggcggcgatgggcaacccggagaagctgatggcgcagatcttcgacctcaagttca 156 |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||| Sbjct: 25832015 cggcggcggcgatggggaacccggagaagctgatgacccagatcttcgacctcaagttca 25832074 Query: 157 cctccaagtcgctgcagcggcaggcgcgcaagtgcgagaaggaggagaaggaccagaagc 216 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 25832075 cctccaagtcgctgcagcggcaggcgcgcaagtgcgagaaggaggagaaggagcagaagc 25832134 Query: 217 tcaaggtcaagaaggccatcgagaagggcaacgtcgacggcgcgcggatctacgccgaga 276 ||||||| |||||||| ||||||||||| ||| | ||||||||||||||||||||||||| Sbjct: 25832135 tcaaggtgaagaaggcgatcgagaaggggaacatggacggcgcgcggatctacgccgaga 25832194 Query: 277 acgccatccgcaagcgcaccgagcacatgaactacctc 314 |||||||||||||||||||||||||||||||||||||| Sbjct: 25832195 acgccatccgcaagcgcaccgagcacatgaactacctc 25832232
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0416A11 Length = 171519 Score = 361 bits (182), Expect = 9e-97 Identities = 209/218 (95%) Strand = Plus / Plus Query: 97 cggcggcggcgatgggcaacccggagaagctgatggcgcagatcttcgacctcaagttca 156 |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||| Sbjct: 114219 cggcggcggcgatggggaacccggagaagctgatgacccagatcttcgacctcaagttca 114278 Query: 157 cctccaagtcgctgcagcggcaggcgcgcaagtgcgagaaggaggagaaggaccagaagc 216 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 114279 cctccaagtcgctgcagcggcaggcgcgcaagtgcgagaaggaggagaaggagcagaagc 114338 Query: 217 tcaaggtcaagaaggccatcgagaagggcaacgtcgacggcgcgcggatctacgccgaga 276 ||||||| |||||||| ||||||||||| ||| | ||||||||||||||||||||||||| Sbjct: 114339 tcaaggtgaagaaggcgatcgagaaggggaacatggacggcgcgcggatctacgccgaga 114398 Query: 277 acgccatccgcaagcgcaccgagcacatgaactacctc 314 |||||||||||||||||||||||||||||||||||||| Sbjct: 114399 acgccatccgcaagcgcaccgagcacatgaactacctc 114436
>dbj|AK104266.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G07, full insert sequence Length = 1020 Score = 361 bits (182), Expect = 9e-97 Identities = 209/218 (95%) Strand = Plus / Plus Query: 97 cggcggcggcgatgggcaacccggagaagctgatggcgcagatcttcgacctcaagttca 156 |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||| Sbjct: 97 cggcggcggcgatggggaacccggagaagctgatgacccagatcttcgacctcaagttca 156 Query: 157 cctccaagtcgctgcagcggcaggcgcgcaagtgcgagaaggaggagaaggaccagaagc 216 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 157 cctccaagtcgctgcagcggcaggcgcgcaagtgcgagaaggaggagaaggagcagaagc 216 Query: 217 tcaaggtcaagaaggccatcgagaagggcaacgtcgacggcgcgcggatctacgccgaga 276 ||||||| |||||||| ||||||||||| ||| | ||||||||||||||||||||||||| Sbjct: 217 tcaaggtgaagaaggcgatcgagaaggggaacatggacggcgcgcggatctacgccgaga 276 Query: 277 acgccatccgcaagcgcaccgagcacatgaactacctc 314 |||||||||||||||||||||||||||||||||||||| Sbjct: 277 acgccatccgcaagcgcaccgagcacatgaactacctc 314
>dbj|AK099061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155P17, full insert sequence Length = 1009 Score = 361 bits (182), Expect = 9e-97 Identities = 209/218 (95%) Strand = Plus / Plus Query: 97 cggcggcggcgatgggcaacccggagaagctgatggcgcagatcttcgacctcaagttca 156 |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||| Sbjct: 98 cggcggcggcgatggggaacccggagaagctgatgacccagatcttcgacctcaagttca 157 Query: 157 cctccaagtcgctgcagcggcaggcgcgcaagtgcgagaaggaggagaaggaccagaagc 216 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 158 cctccaagtcgctgcagcggcaggcgcgcaagtgcgagaaggaggagaaggagcagaagc 217 Query: 217 tcaaggtcaagaaggccatcgagaagggcaacgtcgacggcgcgcggatctacgccgaga 276 ||||||| |||||||| ||||||||||| ||| | ||||||||||||||||||||||||| Sbjct: 218 tcaaggtgaagaaggcgatcgagaaggggaacatggacggcgcgcggatctacgccgaga 277 Query: 277 acgccatccgcaagcgcaccgagcacatgaactacctc 314 |||||||||||||||||||||||||||||||||||||| Sbjct: 278 acgccatccgcaagcgcaccgagcacatgaactacctc 315
>dbj|AK061733.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C12, full insert sequence Length = 1100 Score = 361 bits (182), Expect = 9e-97 Identities = 209/218 (95%) Strand = Plus / Plus Query: 97 cggcggcggcgatgggcaacccggagaagctgatggcgcagatcttcgacctcaagttca 156 |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||| Sbjct: 168 cggcggcggcgatggggaacccggagaagctgatgacccagatcttcgacctcaagttca 227 Query: 157 cctccaagtcgctgcagcggcaggcgcgcaagtgcgagaaggaggagaaggaccagaagc 216 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 228 cctccaagtcgctgcagcggcaggcgcgcaagtgcgagaaggaggagaaggagcagaagc 287 Query: 217 tcaaggtcaagaaggccatcgagaagggcaacgtcgacggcgcgcggatctacgccgaga 276 ||||||| |||||||| ||||||||||| ||| | ||||||||||||||||||||||||| Sbjct: 288 tcaaggtgaagaaggcgatcgagaaggggaacatggacggcgcgcggatctacgccgaga 347 Query: 277 acgccatccgcaagcgcaccgagcacatgaactacctc 314 |||||||||||||||||||||||||||||||||||||| Sbjct: 348 acgccatccgcaagcgcaccgagcacatgaactacctc 385
>gb|AY224520.1| Oryza sativa (japonica cultivar-group) isolate 20533 development protein-like protein mRNA, complete cds Length = 618 Score = 339 bits (171), Expect = 3e-90 Identities = 198/207 (95%) Strand = Plus / Plus Query: 108 atgggcaacccggagaagctgatggcgcagatcttcgacctcaagttcacctccaagtcg 167 ||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 1 atggggaacccggagaagctgatgacccagatcttcgacctcaagttcacctccaagtcg 60 Query: 168 ctgcagcggcaggcgcgcaagtgcgagaaggaggagaaggaccagaagctcaaggtcaag 227 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 61 ctgcagcggcaggcgcgcaagtgcgagaaggaggagaaggagcagaagctcaaggtgaag 120 Query: 228 aaggccatcgagaagggcaacgtcgacggcgcgcggatctacgccgagaacgccatccgc 287 ||||| ||||||||||| ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 121 aaggcgatcgagaaggggaacatggacggcgcgcggatctacgccgagaacgccatccgc 180 Query: 288 aagcgcaccgagcacatgaactacctc 314 ||||||||||||||||||||||||||| Sbjct: 181 aagcgcaccgagcacatgaactacctc 207
>gb|AY243475.1| Zea mays superal1 (Sal1) mRNA, complete cds Length = 615 Score = 331 bits (167), Expect = 8e-88 Identities = 197/207 (95%) Strand = Plus / Plus Query: 108 atgggcaacccggagaagctgatggcgcagatcttcgacctcaagttcacctccaagtcg 167 ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1 atggggaacccggagaagctgatgaatcagatcttcgacctcaagttcacctccaagtcg 60 Query: 168 ctgcagcggcaggcgcgcaagtgcgagaaggaggagaaggaccagaagctcaaggtcaag 227 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 61 ctgcagcggcaggcgcgcaagtgcgagaaggaggagaaggagcagaagctcaaggtcaag 120 Query: 228 aaggccatcgagaagggcaacgtcgacggcgcgcggatctacgccgagaacgccatccgc 287 ||||| ||||||||||||||| | |||||||| || |||||||||||||||||||||||| Sbjct: 121 aaggcgatcgagaagggcaacatggacggcgcccgcatctacgccgagaacgccatccgc 180 Query: 288 aagcgcaccgagcacatgaactacctc 314 ||||||||||||||||||||||||||| Sbjct: 181 aagcgcaccgagcacatgaactacctc 207
>gb|AY104483.1| Zea mays PCO082662 mRNA sequence Length = 1068 Score = 331 bits (167), Expect = 8e-88 Identities = 197/207 (95%) Strand = Plus / Plus Query: 108 atgggcaacccggagaagctgatggcgcagatcttcgacctcaagttcacctccaagtcg 167 ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 190 atggggaacccggagaagctgatgaatcagatcttcgacctcaagttcacctccaagtcg 249 Query: 168 ctgcagcggcaggcgcgcaagtgcgagaaggaggagaaggaccagaagctcaaggtcaag 227 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 250 ctgcagcggcaggcgcgcaagtgcgagaaggaggagaaggagcagaagctcaaggtcaag 309 Query: 228 aaggccatcgagaagggcaacgtcgacggcgcgcggatctacgccgagaacgccatccgc 287 ||||| ||||||||||||||| | |||||||| || |||||||||||||||||||||||| Sbjct: 310 aaggcgatcgagaagggcaacatggacggcgcccgcatctacgccgagaacgccatccgc 369 Query: 288 aagcgcaccgagcacatgaactacctc 314 ||||||||||||||||||||||||||| Sbjct: 370 aagcgcaccgagcacatgaactacctc 396
>ref|NM_101635.3| Arabidopsis thaliana unknown protein AT1G17730 mRNA, complete cds Length = 880 Score = 85.7 bits (43), Expect = 8e-14 Identities = 88/103 (85%) Strand = Plus / Plus Query: 211 agaagctcaaggtcaagaaggccatcgagaagggcaacgtcgacggcgcgcggatctacg 270 ||||||||||||| ||||| ||||| ||||| || ||| | || || || |||||||| | Sbjct: 210 agaagctcaaggtaaagaaagccattgagaaaggtaacatggatggtgctcggatctatg 269 Query: 271 ccgagaacgccatccgcaagcgcaccgagcacatgaactacct 313 ||||||||||||| ||||| |||| |||||| ||||||||||| Sbjct: 270 ccgagaacgccattcgcaaacgcagcgagcagatgaactacct 312
>emb|BX813722.1|CNS0AEA1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB36ZE03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 833 Score = 85.7 bits (43), Expect = 8e-14 Identities = 88/103 (85%) Strand = Plus / Plus Query: 211 agaagctcaaggtcaagaaggccatcgagaagggcaacgtcgacggcgcgcggatctacg 270 ||||||||||||| ||||| ||||| ||||| || ||| | || || || |||||||| | Sbjct: 161 agaagctcaaggtaaagaaagccattgagaaaggtaacatggatggtgctcggatctatg 220 Query: 271 ccgagaacgccatccgcaagcgcaccgagcacatgaactacct 313 ||||||||||||| ||||| |||| |||||| ||||||||||| Sbjct: 221 ccgagaacgccattcgcaaacgcagcgagcagatgaactacct 263
>gb|AY085606.1| Arabidopsis thaliana clone 16054 mRNA, complete sequence Length = 864 Score = 85.7 bits (43), Expect = 8e-14 Identities = 88/103 (85%) Strand = Plus / Plus Query: 211 agaagctcaaggtcaagaaggccatcgagaagggcaacgtcgacggcgcgcggatctacg 270 ||||||||||||| ||||| ||||| ||||| || ||| | || || || |||||||| | Sbjct: 199 agaagctcaaggtaaagaaagccattgagaaaggtaacatggatggtgctcggatctatg 258 Query: 271 ccgagaacgccatccgcaagcgcaccgagcacatgaactacct 313 ||||||||||||| ||||| |||| |||||| ||||||||||| Sbjct: 259 ccgagaacgccattcgcaaacgcagcgagcagatgaactacct 301
>gb|AC034257.3|AC034257 Arabidopsis thaliana chromosome I BAC F11A6 genomic sequence, complete sequence Length = 98950 Score = 85.7 bits (43), Expect = 8e-14 Identities = 88/103 (85%) Strand = Plus / Plus Query: 211 agaagctcaaggtcaagaaggccatcgagaagggcaacgtcgacggcgcgcggatctacg 270 ||||||||||||| ||||| ||||| ||||| || ||| | || || || |||||||| | Sbjct: 79074 agaagctcaaggtaaagaaagccattgagaaaggtaacatggatggtgctcggatctatg 79133 Query: 271 ccgagaacgccatccgcaagcgcaccgagcacatgaactacct 313 ||||||||||||| ||||| |||| |||||| ||||||||||| Sbjct: 79134 ccgagaacgccattcgcaaacgcagcgagcagatgaactacct 79176
>dbj|AK118350.1| Arabidopsis thaliana At1g17730 mRNA for unknown protein, complete cds, clone: RAFL19-61-N04 Length = 865 Score = 85.7 bits (43), Expect = 8e-14 Identities = 88/103 (85%) Strand = Plus / Plus Query: 211 agaagctcaaggtcaagaaggccatcgagaagggcaacgtcgacggcgcgcggatctacg 270 ||||||||||||| ||||| ||||| ||||| || ||| | || || || |||||||| | Sbjct: 203 agaagctcaaggtaaagaaagccattgagaaaggtaacatggatggtgctcggatctatg 262 Query: 271 ccgagaacgccatccgcaagcgcaccgagcacatgaactacct 313 ||||||||||||| ||||| |||| |||||| ||||||||||| Sbjct: 263 ccgagaacgccattcgcaaacgcagcgagcagatgaactacct 305
>dbj|AB010407.1| Arabidopsis thaliana DNA for phosphoglycerate dehydrogenase, complete cds Length = 7087 Score = 85.7 bits (43), Expect = 8e-14 Identities = 88/103 (85%) Strand = Plus / Plus Query: 211 agaagctcaaggtcaagaaggccatcgagaagggcaacgtcgacggcgcgcggatctacg 270 ||||||||||||| ||||| ||||| ||||| || ||| | || || || |||||||| | Sbjct: 599 agaagctcaaggtaaagaaagccattgagaaaggtaacatggatggtgctcggatctatg 658 Query: 271 ccgagaacgccatccgcaagcgcaccgagcacatgaactacct 313 ||||||||||||| ||||| |||| |||||| ||||||||||| Sbjct: 659 ccgagaacgccattcgcaaacgcagcgagcagatgaactacct 701
>dbj|AP006645.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04I09, TM0269a, complete sequence Length = 32761 Score = 69.9 bits (35), Expect = 5e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 264 atctacgccgagaacgccatccgcaagcgcaccgagcacatgaactacctc 314 ||||||| ||||||| |||||||||||| ||||||||| |||||||||||| Sbjct: 30171 atctacgacgagaacaccatccgcaagcacaccgagcagatgaactacctc 30121
>ref|NM_105961.2| Arabidopsis thaliana unknown protein AT1G73030 mRNA, complete cds Length = 998 Score = 63.9 bits (32), Expect = 3e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 219 aaggtcaagaaggccatcgagaagggcaacgtcgacggcgcgcggatctacgccgagaac 278 ||||| |||||||| ||||||||||| || | || || || ||||||||||| |||||| Sbjct: 224 aaggtgaagaaggctatcgagaagggtaatatggatggtgctcggatctacgctgagaac 283 Query: 279 gccatccgcaagcgcaccgagcacatgaacta 310 ||||| || ||||| | |||||| |||||||| Sbjct: 284 gccattcgtaagcgtagcgagcagatgaacta 315
>gb|AY081673.1| Arabidopsis thaliana similar to developmental protein DG1118 (At1g73030) mRNA, complete cds Length = 692 Score = 63.9 bits (32), Expect = 3e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 219 aaggtcaagaaggccatcgagaagggcaacgtcgacggcgcgcggatctacgccgagaac 278 ||||| |||||||| ||||||||||| || | || || || ||||||||||| |||||| Sbjct: 112 aaggtgaagaaggctatcgagaagggtaatatggatggtgctcggatctacgctgagaac 171 Query: 279 gccatccgcaagcgcaccgagcacatgaacta 310 ||||| || ||||| | |||||| |||||||| Sbjct: 172 gccattcgtaagcgtagcgagcagatgaacta 203
>gb|AY059851.1| Arabidopsis thaliana Highly similar to developmental protein DG1118 (At1g73030; F3N23.23) mRNA, complete cds Length = 952 Score = 63.9 bits (32), Expect = 3e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 219 aaggtcaagaaggccatcgagaagggcaacgtcgacggcgcgcggatctacgccgagaac 278 ||||| |||||||| ||||||||||| || | || || || ||||||||||| |||||| Sbjct: 224 aaggtgaagaaggctatcgagaagggtaatatggatggtgctcggatctacgctgagaac 283 Query: 279 gccatccgcaagcgcaccgagcacatgaacta 310 ||||| || ||||| | |||||| |||||||| Sbjct: 284 gccattcgtaagcgtagcgagcagatgaacta 315
>emb|BX816668.1|CNS0ABMG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH61ZF08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 865 Score = 63.9 bits (32), Expect = 3e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 219 aaggtcaagaaggccatcgagaagggcaacgtcgacggcgcgcggatctacgccgagaac 278 ||||| |||||||| ||||||||||| || | || || || ||||||||||| |||||| Sbjct: 207 aaggtgaagaaggctatcgagaagggtaatatggatggtgctcggatctacgctgagaac 266 Query: 279 gccatccgcaagcgcaccgagcacatgaacta 310 ||||| || ||||| | |||||| |||||||| Sbjct: 267 gccattcgtaagcgtagcgagcagatgaacta 298
>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete sequence Length = 116944 Score = 63.9 bits (32), Expect = 3e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 219 aaggtcaagaaggccatcgagaagggcaacgtcgacggcgcgcggatctacgccgagaac 278 ||||| |||||||| ||||||||||| || | || || || ||||||||||| |||||| Sbjct: 76621 aaggtgaagaaggctatcgagaagggtaatatggatggtgctcggatctacgctgagaac 76680 Query: 279 gccatccgcaagcgcaccgagcacatgaacta 310 ||||| || ||||| | |||||| |||||||| Sbjct: 76681 gccattcgtaagcgtagcgagcagatgaacta 76712
>gb|AY084868.1| Arabidopsis thaliana clone 119909 mRNA, complete sequence Length = 950 Score = 56.0 bits (28), Expect = 7e-05 Identities = 76/92 (82%) Strand = Plus / Plus Query: 219 aaggtcaagaaggccatcgagaagggcaacgtcgacggcgcgcggatctacgccgagaac 278 ||||| |||||||| ||||||||||| || | || || || ||||||||||| |||||| Sbjct: 221 aaggtgaagaaggctatcgagaagggtaatatggatggtgctcggatctacgctgagaac 280 Query: 279 gccatccgcaagcgcaccgagcacatgaacta 310 ||||| || ||||| | ||||| |||||||| Sbjct: 281 gccattcgtaagcgtagrgagcagatgaacta 312
>emb|BX818756.1|CNS0AB5K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL9ZH06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 935 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Plus Query: 219 aaggtcaagaaggccatcgagaagggcaacgtcgacggcgcgcggatctacgccgagaac 278 ||||| |||||||| ||||||||||| || | || || || ||||||||||| |||||| Sbjct: 185 aaggtgaagaaggctatcgagaagggtaatatggatggtgctcggatctacgctgagaac 244 Query: 279 gccatccgcaagcg 292 ||||| || ||||| Sbjct: 245 gccattcgtaagcg 258
>gb|AY217740.1| Nicotiana benthamiana putative developmental protein mRNA, complete cds Length = 875 Score = 50.1 bits (25), Expect = 0.004 Identities = 37/41 (90%) Strand = Plus / Plus Query: 267 tacgccgagaacgccatccgcaagcgcaccgagcacatgaa 307 |||||||||||||| ||||||||||||| ||| || ||||| Sbjct: 274 tacgccgagaacgcaatccgcaagcgcagcgaacagatgaa 314
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 48.1 bits (24), Expect = 0.017 Identities = 24/24 (100%) Strand = Plus / Minus Query: 93 ccggcggcggcggcgatgggcaac 116 |||||||||||||||||||||||| Sbjct: 2855228 ccggcggcggcggcgatgggcaac 2855205 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 9374081 cggcggcggcggcgatgggc 9374100
>dbj|AK064843.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000G07, full insert sequence Length = 1694 Score = 48.1 bits (24), Expect = 0.017 Identities = 24/24 (100%) Strand = Plus / Plus Query: 93 ccggcggcggcggcgatgggcaac 116 |||||||||||||||||||||||| Sbjct: 92 ccggcggcggcggcgatgggcaac 115
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 48.1 bits (24), Expect = 0.017 Identities = 24/24 (100%) Strand = Plus / Minus Query: 93 ccggcggcggcggcgatgggcaac 116 |||||||||||||||||||||||| Sbjct: 2855172 ccggcggcggcggcgatgggcaac 2855149 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 9373966 cggcggcggcggcgatgggc 9373985
>emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb0075N21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145539 Score = 48.1 bits (24), Expect = 0.017 Identities = 24/24 (100%) Strand = Plus / Plus Query: 93 ccggcggcggcggcgatgggcaac 116 |||||||||||||||||||||||| Sbjct: 15219 ccggcggcggcggcgatgggcaac 15242
>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09, complete sequence Length = 167318 Score = 46.1 bits (23), Expect = 0.067 Identities = 23/23 (100%) Strand = Plus / Minus Query: 92 accggcggcggcggcgatgggca 114 ||||||||||||||||||||||| Sbjct: 86183 accggcggcggcggcgatgggca 86161
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 46.1 bits (23), Expect = 0.067 Identities = 23/23 (100%) Strand = Plus / Plus Query: 254 cggcgcgcggatctacgccgaga 276 ||||||||||||||||||||||| Sbjct: 2502163 cggcgcgcggatctacgccgaga 2502185
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.067 Identities = 23/23 (100%) Strand = Plus / Minus Query: 92 accggcggcggcggcgatgggca 114 ||||||||||||||||||||||| Sbjct: 17826229 accggcggcggcggcgatgggca 17826207 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 26781480 cggcggcggcggcgatgggc 26781461
>dbj|AK102012.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033080D06, full insert sequence Length = 2055 Score = 46.1 bits (23), Expect = 0.067 Identities = 23/23 (100%) Strand = Plus / Plus Query: 92 accggcggcggcggcgatgggca 114 ||||||||||||||||||||||| Sbjct: 218 accggcggcggcggcgatgggca 240
>gb|AY432510.1| Aedes aegypti ASAP ID: 36135 conserved unknown mRNA sequence Length = 776 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 186 aagtgcgagaaggaggagaagg 207 |||||||||||||||||||||| Sbjct: 252 aagtgcgagaaggaggagaagg 273
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.26 Identities = 31/34 (91%) Strand = Plus / Plus Query: 216 ctcaaggtcaagaaggccatcgagaagggcaacg 249 |||||||| |||||||| ||||||||||| |||| Sbjct: 2273448 ctcaaggtgaagaaggcgatcgagaagggaaacg 2273481 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 ggcggcggcggcgatgggcaa 115 ||||||||||||||||||||| Sbjct: 727831 ggcggcggcggcgatgggcaa 727851 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 cggcggcggcggcgatgggca 114 ||||||||||||||||||||| Sbjct: 576041 cggcggcggcggcgatgggca 576021 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 15189889 cggcggcggcggcgatgggc 15189908
>dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0473D02 Length = 146185 Score = 44.1 bits (22), Expect = 0.26 Identities = 31/34 (91%) Strand = Plus / Plus Query: 216 ctcaaggtcaagaaggccatcgagaagggcaacg 249 |||||||| |||||||| ||||||||||| |||| Sbjct: 20947 ctcaaggtgaagaaggcgatcgagaagggaaacg 20980
>dbj|AP003911.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1368_G08 Length = 107074 Score = 44.1 bits (22), Expect = 0.26 Identities = 31/34 (91%) Strand = Plus / Plus Query: 216 ctcaaggtcaagaaggccatcgagaagggcaacg 249 |||||||| |||||||| ||||||||||| |||| Sbjct: 71575 ctcaaggtgaagaaggcgatcgagaagggaaacg 71608
>gb|L35560.1|STMDNRDPS Streptomyces peucetius daunorubicin-doxorubicin polyketide synthase (dnrH, dpsA-dpsF) genes, ORF5 and ORF8, complete cds Length = 8737 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 255 ggcgcgcggatctacgccgaga 276 |||||||||||||||||||||| Sbjct: 4023 ggcgcgcggatctacgccgaga 4044
>ref|XM_523471.1| PREDICTED: Pan troglodytes similar to charged multivesicular body protein 1/chromatin modifying protein 1 (LOC468080), mRNA Length = 363 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 gccgagaacgccatccgcaag 290 ||||||||||||||||||||| Sbjct: 163 gccgagaacgccatccgcaag 183
>ref|XM_479737.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3088 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 cggcggcggcggcgatgggca 114 ||||||||||||||||||||| Sbjct: 1655 cggcggcggcggcgatgggca 1675
>gb|AC146948.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0782F03 map near S2137, complete sequence Length = 197516 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 ccggcggcggcggcgatgggc 113 ||||||||||||||||||||| Sbjct: 104968 ccggcggcggcggcgatgggc 104948
>gb|AF064217.1| Zea mays race Nal-tel globulin-1 gene, partial cds Length = 1093 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 gagaaggaggagaaggaccag 212 ||||||||||||||||||||| Sbjct: 453 gagaaggaggagaaggaccag 473
>gb|AF064213.1| Zea mays race Chococeno globulin-1 gene, partial cds Length = 1094 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 gagaaggaggagaaggaccag 212 ||||||||||||||||||||| Sbjct: 453 gagaaggaggagaaggaccag 473
>gb|AC111092.10| Mus musculus chromosome 12, clone RP23-168O9, complete sequence Length = 211926 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 aggaccagaagctcaaggtca 225 ||||||||||||||||||||| Sbjct: 17907 aggaccagaagctcaaggtca 17887
>gb|BC007527.1| Homo sapiens procollagen (type III) N-endopeptidase, mRNA (cDNA clone IMAGE:3507056), partial cds Length = 2275 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 gccgagaacgccatccgcaag 290 ||||||||||||||||||||| Sbjct: 180 gccgagaacgccatccgcaag 200
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 cggcgcgcggatctacgccga 274 ||||||||||||||||||||| Sbjct: 3317388 cggcgcgcggatctacgccga 3317368 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gtcgacggcgcgcggatcta 268 |||||||||||||||||||| Sbjct: 2219385 gtcgacggcgcgcggatcta 2219404
>gb|AC010538.9| Homo sapiens chromosome 16 clone RP11-368I7, complete sequence Length = 210031 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 gccgagaacgccatccgcaag 290 ||||||||||||||||||||| Sbjct: 92216 gccgagaacgccatccgcaag 92236
>ref|XM_963270.1| PREDICTED: Tribolium castaneum similar to Hunchback protein (LOC656763), mRNA Length = 1575 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 185 caagtgcgagaaggaggagaaggac 209 |||| |||||||||||||||||||| Sbjct: 351 caagagcgagaaggaggagaaggac 375
>emb|X90711.1|BPLPSBLOC Bordetella pertussis lipopolysaccharide biosynthesis locus baf gene, waaA, waaB & wlbA,B,C,D,E,F,G,H,I,J & L genes Length = 15389 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 221 ggtcaagaaggccatcgagaagggc 245 ||||||||||||||||||| ||||| Sbjct: 3133 ggtcaagaaggccatcgagcagggc 3157
>emb|CR860695.1| Pongo pygmaeus mRNA; cDNA DKFZp459P0727 (from clone DKFZp459P0727) Length = 2348 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 gccgagaacgccatccgcaag 290 ||||||||||||||||||||| Sbjct: 241 gccgagaacgccatccgcaag 261
>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16 Length = 347356 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 ggtcaagaaggccatcgagaagggc 245 ||||||||||||||||||| ||||| Sbjct: 166915 ggtcaagaaggccatcgagcagggc 166891
>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14 Length = 348251 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 ggtcaagaaggccatcgagaagggc 245 ||||||||||||||||||| ||||| Sbjct: 170363 ggtcaagaaggccatcgagcagggc 170339
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 ggtcaagaaggccatcgagaagggc 245 ||||||||||||||||||| ||||| Sbjct: 91427 ggtcaagaaggccatcgagcagggc 91403
>emb|AJ007747.1|BBR007747 Bordetella bronchiseptica cosmid BbLPS1 Length = 41642 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 ggtcaagaaggccatcgagaagggc 245 ||||||||||||||||||| ||||| Sbjct: 38432 ggtcaagaaggccatcgagcagggc 38408
>gb|BT007553.1| Synthetic construct Homo sapiens procollagen (type III) N-endopeptidase mRNA, partial cds Length = 591 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 gccgagaacgccatccgcaag 290 ||||||||||||||||||||| Sbjct: 145 gccgagaacgccatccgcaag 165
>gb|BT006841.1| Homo sapiens procollagen (type III) N-endopeptidase mRNA, complete cds Length = 591 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 gccgagaacgccatccgcaag 290 ||||||||||||||||||||| Sbjct: 145 gccgagaacgccatccgcaag 165
>emb|CR618565.1| full-length cDNA clone CS0DL012YA11 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 2295 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 gccgagaacgccatccgcaag 290 ||||||||||||||||||||| Sbjct: 246 gccgagaacgccatccgcaag 266
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 cggcggcggcggcgatgggca 114 ||||||||||||||||||||| Sbjct: 14731 cggcggcggcggcgatgggca 14711 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 tcaagaaggccatcgagaag 242 |||||||||||||||||||| Sbjct: 2150772 tcaagaaggccatcgagaag 2150753
>gb|AC082650.6| Homo sapiens BAC clone RP11-419L4 from 4, complete sequence Length = 169408 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 gagaaggaggagaaggaccag 212 ||||||||||||||||||||| Sbjct: 92733 gagaaggaggagaaggaccag 92713
>gb|AC096777.1| Mus musculus clone RP23-106L19, complete sequence Length = 209671 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 201 gagaaggaccagaagctcaaggtca 225 ||||||||||||||||| ||||||| Sbjct: 30760 gagaaggaccagaagctgaaggtca 30784
>gb|AF281063.1|AF281063 Homo sapiens charged multivesicular body protein 1/chromatin modifying protein 1 mRNA, complete cds Length = 691 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 gccgagaacgccatccgcaag 290 ||||||||||||||||||||| Sbjct: 195 gccgagaacgccatccgcaag 215
>gb|AC160337.2| Mus musculus BAC clone RP23-193N1 from chromosome 9, complete sequence Length = 204712 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 aggaccagaagctcaaggtca 225 ||||||||||||||||||||| Sbjct: 125741 aggaccagaagctcaaggtca 125721
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 cggcgcgcggatctacgccga 274 ||||||||||||||||||||| Sbjct: 2825570 cggcgcgcggatctacgccga 2825590 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 414229 cggcggcggcggcgatgggc 414248
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 ccggcggcggcggcgatgggc 113 ||||||||||||||||||||| Sbjct: 8024240 ccggcggcggcggcgatgggc 8024220
>dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0427G12 Length = 185545 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 ggcggcggcggcgatgggcaa 115 ||||||||||||||||||||| Sbjct: 27051 ggcggcggcggcgatgggcaa 27071
>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0007D08 Length = 183142 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 cggcggcggcggcgatgggca 114 ||||||||||||||||||||| Sbjct: 166001 cggcggcggcggcgatgggca 165981
>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498H04 Length = 151046 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 cggcggcggcggcgatgggca 114 ||||||||||||||||||||| Sbjct: 3419 cggcggcggcggcgatgggca 3399
>emb|AJ234615.1|HVU234615 Hordeum vulgare genomic DNA fragment; clone MWG0882.rev Length = 445 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 accgagcacatgaactacctc 314 ||||||||||||||||||||| Sbjct: 303 accgagcacatgaactacctc 323
>dbj|AK072300.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020B06, full insert sequence Length = 3088 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 cggcggcggcggcgatgggca 114 ||||||||||||||||||||| Sbjct: 1655 cggcggcggcggcgatgggca 1675
>dbj|AK072275.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012F04, full insert sequence Length = 1640 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 ggcggcggcggcgatgggcaa 115 ||||||||||||||||||||| Sbjct: 656 ggcggcggcggcgatgggcaa 676
>dbj|AK071052.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075E09, full insert sequence Length = 1891 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 ggcggcggcggcgatgggcaa 115 ||||||||||||||||||||| Sbjct: 885 ggcggcggcggcgatgggcaa 905
>dbj|AK068393.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151L09, full insert sequence Length = 2424 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 ggcggcggcggcgatgggcaa 115 ||||||||||||||||||||| Sbjct: 656 ggcggcggcggcgatgggcaa 676
>gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 12, complete sequence Length = 207280 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 aggaccagaagctcaaggtca 225 ||||||||||||||||||||| Sbjct: 120138 aggaccagaagctcaaggtca 120118
>dbj|D38554.1|HUMHA1551B Homo sapiens KIAA0047 mRNA, partial cds Length = 2284 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 gccgagaacgccatccgcaag 290 ||||||||||||||||||||| Sbjct: 210 gccgagaacgccatccgcaag 230
>gb|U58048.1|HSU58048 Human metallopeptidase PRSM1 mRNA, complete cds Length = 2474 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 gccgagaacgccatccgcaag 290 ||||||||||||||||||||| Sbjct: 399 gccgagaacgccatccgcaag 419
>emb|CR974568.14| Mouse DNA sequence from clone RP23-39N20 on chromosome 12, complete sequence Length = 251037 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 aggaccagaagctcaaggtca 225 ||||||||||||||||||||| Sbjct: 1738 aggaccagaagctcaaggtca 1758
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 ccggcggcggcggcgatgggc 113 ||||||||||||||||||||| Sbjct: 8094179 ccggcggcggcggcgatgggc 8094159
>gb|AC126939.5| Mus musculus BAC clone RP23-62M8 from 13, complete sequence Length = 236514 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 aggaccagaagctcaaggtca 225 ||||||||||||||||||||| Sbjct: 167795 aggaccagaagctcaaggtca 167775
>ref|NM_002768.1| Homo sapiens procollagen (type III) N-endopeptidase (PCOLN3), mRNA Length = 2474 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 gccgagaacgccatccgcaag 290 ||||||||||||||||||||| Sbjct: 399 gccgagaacgccatccgcaag 419
>emb|AL824707.7| Mouse DNA sequence from clone RP23-95O1 on chromosome 4, complete sequence Length = 225002 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 aggaccagaagctcaaggtca 225 ||||||||||||||||||||| Sbjct: 212917 aggaccagaagctcaaggtca 212937 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 aggaccagaagctcaaggtca 225 ||||||||||||||||||||| Sbjct: 180296 aggaccagaagctcaaggtca 180316
>emb|X91618.1|TCHB T.castaneum hunchback gene Length = 7560 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 185 caagtgcgagaaggaggagaaggac 209 |||| |||||||||||||||||||| Sbjct: 5751 caagagcgagaaggaggagaaggac 5775
>ref|NM_184430.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3038 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ccggcggcggcggcgatgggcaac 116 |||||||||||||||| ||||||| Sbjct: 633 ccggcggcggcggcgaggggcaac 656
>ref|XM_481746.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1833 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 699 cggcggcggcggcgatgggc 718
>ref|XM_474174.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 420 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 320 cggcggcggcggcgatgggc 339
>ref|XM_465048.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1184 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 471 cggcggcggcggcgatgggc 490
>gb|AY022875.1| Oryza sativa microsatellite MRG5200 containing (CGG)X8, closest to marker C246, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 188 cggcggcggcggcgatgggc 207
>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07, complete sequence Length = 122120 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 63419 cggcggcggcggcgatgggc 63400
>gb|AC164700.3| Mus musculus BAC clone RP24-548M16 from chromosome 5, complete sequence Length = 212172 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 202 agaaggaccagaagctcaaggtca 225 |||||||||||||| ||||||||| Sbjct: 12616 agaaggaccagaagttcaaggtca 12639
>gb|AC118285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1206_C08, complete sequence Length = 115026 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 19720 cggcggcggcggcgatgggc 19701
>gb|AC009844.7| Drosophila melanogaster clone BACR01L16, complete sequence Length = 168238 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 aggtcaagaaggccatcgag 239 |||||||||||||||||||| Sbjct: 26854 aggtcaagaaggccatcgag 26873
>gb|BC067162.1| Danio rerio proteasome activator subunit 2, mRNA (cDNA clone MGC:77535 IMAGE:6805860), complete cds Length = 1440 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 aggaggagaaggaccagaag 215 |||||||||||||||||||| Sbjct: 1324 aggaggagaaggaccagaag 1305
>ref|XM_953384.1| Neurospora crassa OR74A hypothetical protein (NCU07393.1) partial mRNA Length = 2736 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 agaagctcaaggtcaagaaggcca 234 |||| ||||||||||||||||||| Sbjct: 2591 agaacctcaaggtcaagaaggcca 2614
>ref|XM_956806.1| Neurospora crassa OR74A hypothetical protein (NCU08271.1) partial mRNA Length = 1437 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 aacaaccggcggcggcggcg 107 |||||||||||||||||||| Sbjct: 768 aacaaccggcggcggcggcg 787
>ref|XM_327678.1| Neurospora crassa OR74A hypothetical protein (NCU07393.1) partial mRNA Length = 2736 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 agaagctcaaggtcaagaaggcca 234 |||| ||||||||||||||||||| Sbjct: 2591 agaacctcaaggtcaagaaggcca 2614
>ref|XM_328976.1| Neurospora crassa OR74A hypothetical protein (NCU08271.1) partial mRNA Length = 1437 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 aacaaccggcggcggcggcg 107 |||||||||||||||||||| Sbjct: 768 aacaaccggcggcggcggcg 787
>gb|AE009206.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 232 of 256 of the complete sequence Length = 12965 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 accggcggcggcggcgatgg 111 |||||||||||||||||||| Sbjct: 733 accggcggcggcggcgatgg 752
>gb|AC130222.4| Mus musculus BAC clone RP23-18K19 from chromosome 12, complete sequence Length = 218608 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 199 aggagaaggaccagaagctcaagg 222 |||||||||| ||||||||||||| Sbjct: 17630 aggagaaggatcagaagctcaagg 17653
>ref|XM_655573.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3061.2), mRNA Length = 1305 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 ggtcaagaaggccatcgaga 240 |||||||||||||||||||| Sbjct: 39 ggtcaagaaggccatcgaga 58
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 gcggcggcggcgatgggcaa 115 |||||||||||||||||||| Sbjct: 17171588 gcggcggcggcgatgggcaa 17171569
>gb|AC132854.8| Mus musculus chromosome 1, clone RP24-392J14, complete sequence Length = 173236 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 202 agaaggaccagaagctcaaggtca 225 ||||| |||||||||||||||||| Sbjct: 134087 agaagaaccagaagctcaaggtca 134110
>gb|AY261525.1| Populus alba x Populus tremula putative cytosolic glutamine synthetase mRNA, partial cds Length = 311 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 tcaagaaggccatcgagaag 242 |||||||||||||||||||| Sbjct: 51 tcaagaaggccatcgagaag 70
>gb|AC116995.3| Mus musculus BAC clone RP23-3C16 from 1, complete sequence Length = 173131 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 gaaggaccagaagctcaagg 222 |||||||||||||||||||| Sbjct: 39020 gaaggaccagaagctcaagg 39039
>ref|XM_546776.2| PREDICTED: Canis familiaris similar to Chromatin modifying protein 1 (Charged multivesicular body protein 1) (CHMP1), transcript variant 1 (LOC489656), mRNA Length = 1157 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 267 tacgccgagaacgccatccgcaag 290 ||||| |||||||||||||||||| Sbjct: 214 tacgctgagaacgccatccgcaag 237
>ref|XM_855103.1| PREDICTED: Canis familiaris similar to Chromatin modifying protein 1 (Charged multivesicular body protein 1) (CHMP1), transcript variant 2 (LOC489656), mRNA Length = 686 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 267 tacgccgagaacgccatccgcaag 290 ||||| |||||||||||||||||| Sbjct: 214 tacgctgagaacgccatccgcaag 237
>gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 genomic sequence, complete sequence Length = 115326 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 gcggcggcggcgatgggcaa 115 |||||||||||||||||||| Sbjct: 4332 gcggcggcggcgatgggcaa 4313
>gb|AC093655.4| Homo sapiens BAC clone RP11-424F6 from 7, complete sequence Length = 119721 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 192 gagaaggaggagaaggaccagaag 215 |||||||||||||||||| ||||| Sbjct: 38042 gagaaggaggagaaggacaagaag 38019
>gb|AC073216.7| Homo sapiens BAC clone RP11-521C10 from 7, complete sequence Length = 113530 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 192 gagaaggaggagaaggaccagaag 215 |||||||||||||||||| ||||| Sbjct: 31267 gagaaggaggagaaggacaagaag 31244
>ref|XM_966877.1| PREDICTED: Tribolium castaneum similar to CG10986-PB (LOC660664), mRNA Length = 2658 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 caagtgcgagaaggaggagaagga 208 |||| ||||||||||||||||||| Sbjct: 2490 caagggcgagaaggaggagaagga 2513
>gb|AC096310.9| Rattus norvegicus 1 BAC CH230-121B19 (Children's Hospital Oakland Research Institute) complete sequence Length = 218258 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 202 agaaggaccagaagctcaaggtca 225 |||||||||||||| ||||||||| Sbjct: 18276 agaaggaccagaagttcaaggtca 18299
>emb|X73903.1|SCGLGB S.coelicolor glgBII gene Length = 3162 Score = 40.1 bits (20), Expect = 4.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 94 cggcggcggcggcgatgggcaacccgga 121 |||||||||||||| ||||||||||||| Sbjct: 2589 cggcggcggcggcg-tgggcaacccgga 2615
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 40.1 bits (20), Expect = 4.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 94 cggcggcggcggcgatgggcaacccgga 121 |||||||||||||| ||||||||||||| Sbjct: 81202 cggcggcggcggcg-tgggcaacccgga 81176
>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete sequence Length = 153247 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 gcggcggcggcgatgggcaa 115 |||||||||||||||||||| Sbjct: 62981 gcggcggcggcgatgggcaa 62962
>emb|AL606446.1|OSJN00016 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F16, complete sequence Length = 119535 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 117066 cggcggcggcggcgatgggc 117047
>emb|AL591429.9| Mouse DNA sequence from clone RP23-307I20 on chromosome 11 Contains a novel gene, complete sequence Length = 149879 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 agaaggaccagaagctcaaggtca 225 |||||||||||||| ||||||||| Sbjct: 97147 agaaggaccagaagttcaaggtca 97124
>gb|BC056700.1| Danio rerio proteasome activator subunit 2, mRNA (cDNA clone MGC:66048 IMAGE:6794995), complete cds Length = 1383 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 aggaggagaaggaccagaag 215 |||||||||||||||||||| Sbjct: 1315 aggaggagaaggaccagaag 1296
>emb|BX571950.6| Zebrafish DNA sequence from clone CH211-198P7 in linkage group 12, complete sequence Length = 196442 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 aggaggagaaggaccagaag 215 |||||||||||||||||||| Sbjct: 112077 aggaggagaaggaccagaag 112096
>gb|AE011679.1| Xanthomonas axonopodis pv. citri str. 306, section 57 of 469 of the complete genome Length = 10029 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 tcgctgcagcggcaggcgcg 184 |||||||||||||||||||| Sbjct: 6599 tcgctgcagcggcaggcgcg 6618
>ref|NM_137160.1| Drosophila melanogaster Cyp317a1 CG17453-RA (Cyp317a1), mRNA Length = 1557 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 aggtcaagaaggccatcgag 239 |||||||||||||||||||| Sbjct: 1046 aggtcaagaaggccatcgag 1065
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 accggcggcggcggcgatgg 111 |||||||||||||||||||| Sbjct: 2567762 accggcggcggcggcgatgg 2567781
>gb|AE010179.1| Pyrococcus furiosus DSM 3638, section 54 of 173 of the complete genome Length = 13617 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 aaggtcaagaaggccatcga 238 |||||||||||||||||||| Sbjct: 11182 aaggtcaagaaggccatcga 11163
>ref|XM_687374.1| PREDICTED: Danio rerio similar to proteasome activator subunit 2 (LOC564014), mRNA Length = 1319 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 aggaggagaaggaccagaag 215 |||||||||||||||||||| Sbjct: 1274 aggaggagaaggaccagaag 1255
>ref|XM_687308.1| PREDICTED: Danio rerio similar to LSM5 homolog, U6 small nuclear RNA associated (LOC563948), mRNA Length = 748 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 aggaggagaaggaccagaag 215 |||||||||||||||||||| Sbjct: 330 aggaggagaaggaccagaag 349
>gb|AC154731.2| Mus musculus BAC clone RP23-121M22 from chromosome 14, complete sequence Length = 215346 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 agaaggaccagaagctcaaggtca 225 |||||||||||||| ||||||||| Sbjct: 140782 agaaggaccagaagttcaaggtca 140759
>gb|AC153652.3| Mus musculus BAC clone RP24-89C18 from chromosome 1, complete sequence Length = 168628 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 gaaggaccagaagctcaagg 222 |||||||||||||||||||| Sbjct: 88529 gaaggaccagaagctcaagg 88510
>gb|AC158996.2| Mus musculus BAC clone RP24-137I10 from chromosome 9, complete sequence Length = 154654 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 agaaggaccagaagctcaaggtca 225 |||||||||||||| ||||||||| Sbjct: 59091 agaaggaccagaagttcaaggtca 59068
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 33471187 cggcggcggcggcgatgggc 33471168
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 27724376 cggcggcggcggcgatgggc 27724357
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 gcggcggcggcgatgggcaa 115 |||||||||||||||||||| Sbjct: 17165157 gcggcggcggcgatgggcaa 17165138
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 11126058 cggcggcggcggcgatgggc 11126039
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 accggcggcggcggcgatgg 111 |||||||||||||||||||| Sbjct: 3389772 accggcggcggcggcgatgg 3389753 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ccggcggcggcggcgatgggcaac 116 |||||||||||||||| ||||||| Sbjct: 2982689 ccggcggcggcggcgaggggcaac 2982712
>ref|NM_131374.1| Danio rerio proteasome activator subunit 2 (psme2), mRNA Length = 1380 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 aggaggagaaggaccagaag 215 |||||||||||||||||||| Sbjct: 1348 aggaggagaaggaccagaag 1329
>gb|AF195051.1|AF195051 Danio rerio proteasome activator subunit 2 (psme2) mRNA, complete cds Length = 1380 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 aggaggagaaggaccagaag 215 |||||||||||||||||||| Sbjct: 1348 aggaggagaaggaccagaag 1329
>emb|BX934451.1| Gallus gallus finished cDNA, clone ChEST963a2 Length = 934 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 14 cggcggcggcggcgatgggc 33
>emb|BX930224.1| Gallus gallus finished cDNA, clone ChEST1019f6 Length = 922 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 4 cggcggcggcggcgatgggc 23
>gb|AC122227.4| Mus musculus BAC clone RP23-131H10 from chromosome 12, complete sequence Length = 208332 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 199 aggagaaggaccagaagctcaagg 222 |||||||||| ||||||||||||| Sbjct: 165030 aggagaaggatcagaagctcaagg 165053
>dbj|AP004378.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0496C02 Length = 148419 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 16755 cggcggcggcggcgatgggc 16736
>dbj|AP004574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702G08 Length = 144596 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 37714 cggcggcggcggcgatgggc 37733
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 103478 cggcggcggcggcgatgggc 103459
>dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0701D05 Length = 172161 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 accggcggcggcggcgatgg 111 |||||||||||||||||||| Sbjct: 68142 accggcggcggcggcgatgg 68123
>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0011G08 Length = 139490 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ccggcggcggcggcgatgggcaac 116 |||||||||||||||| ||||||| Sbjct: 64206 ccggcggcggcggcgaggggcaac 64229
>dbj|AP004229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_E11 Length = 133524 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 108752 cggcggcggcggcgatgggc 108733
>dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1057_D08 Length = 119557 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 45237 cggcggcggcggcgatgggc 45218
>dbj|AK119338.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-D04, full insert sequence Length = 2480 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 accggcggcggcggcgatgg 111 |||||||||||||||||||| Sbjct: 33 accggcggcggcggcgatgg 52
>dbj|AK106941.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-D05, full insert sequence Length = 1184 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 471 cggcggcggcggcgatgggc 490
>dbj|AK099840.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108C16, full insert sequence Length = 3038 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ccggcggcggcggcgatgggcaac 116 |||||||||||||||| ||||||| Sbjct: 633 ccggcggcggcggcgaggggcaac 656
>dbj|AK061213.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-D08, full insert sequence Length = 1038 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 127 cggcggcggcggcgatgggc 146
>gb|AF111710.1|AF111710 Oryza sativa subsp. indica putative dnaJ-like protein, putative myb-related protein, putative farnesyl pyrophosphate synthase, and hypothetical protein genes, complete cds Length = 43422 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 12607 cggcggcggcggcgatgggc 12626
>gb|AF004847.1|AF004847 Helianthus annuus cytosolic glutamine synthetase (ggs1.1) mRNA, partial cds Length = 790 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 tcaagaaggccatcgagaag 242 |||||||||||||||||||| Sbjct: 203 tcaagaaggccatcgagaag 222
>gb|AE003812.4| Drosophila melanogaster chromosome 2R, section 38 of 73 of the complete sequence Length = 255772 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 aggtcaagaaggccatcgag 239 |||||||||||||||||||| Sbjct: 2697 aggtcaagaaggccatcgag 2716
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cgctgcagcggcaggcgcgc 185 |||||||||||||||||||| Sbjct: 784668 cgctgcagcggcaggcgcgc 784687
>gb|AC104548.6| Mus musculus chromosome 5, clone RP24-83N12, complete sequence Length = 214247 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 agaaggaccagaagctcaaggtca 225 |||||||||||||| ||||||||| Sbjct: 135007 agaaggaccagaagttcaaggtca 134984
>emb|AL731744.6|CNS08C7T Oryza sativa chromosome 12, . BAC OSJNBa0026C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 190718 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 64974 cggcggcggcggcgatgggc 64955
>emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071I13, complete sequence Length = 152264 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cggcggcggcggcgatgggc 113 |||||||||||||||||||| Sbjct: 47376 cggcggcggcggcgatgggc 47357
>gb|AC129777.4| Mus musculus BAC clone RP23-281H23 from 8, complete sequence Length = 228174 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 202 agaaggaccagaagctcaaggtca 225 ||||||| |||||||||||||||| Sbjct: 67581 agaaggatcagaagctcaaggtca 67604
>emb|AL591209.17| Mouse DNA sequence from clone RP23-309H19 on chromosome 11, complete sequence Length = 199634 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 agaaggaccagaagctcaaggtca 225 ||||||| |||||||||||||||| Sbjct: 125472 agaaggatcagaagctcaaggtca 125449
>gb|L02544.1|CFICEND Cellulomonas fimi endo-1,4-beta-D-glucanase (cenD) gene, complete cds Length = 3480 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 acgtcgacggcgcgcggatc 266 |||||||||||||||||||| Sbjct: 3185 acgtcgacggcgcgcggatc 3166 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,536,320 Number of Sequences: 3902068 Number of extensions: 2536320 Number of successful extensions: 211163 Number of sequences better than 10.0: 154 Number of HSP's better than 10.0 without gapping: 156 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 203184 Number of HSP's gapped (non-prelim): 7975 length of query: 314 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 292 effective length of database: 17,147,199,772 effective search space: 5006982333424 effective search space used: 5006982333424 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
