>RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F (HRP36.1|
           protein) (Protein P11)
          Length = 385

 Score = 33.1 bits (74), Expect = 0.70
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +1

Query: 127 GGSSQMGNWGQGGSNTGSSIRSGGRGNWDG 216
           GG    G+ GQGG   G   R  G GNW G
Sbjct: 211 GGRGGQGDRGQGGGGWGGQNRQNGGGNWGG 240

>FIBA1_PETMA (P02674) Fibrinogen alpha-1 chain precursor [Contains:|
           Fibrinopeptide A] (Fragment)
          Length = 966

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
 Frame = +1

Query: 124 NGGSSQMGNWGQGGS---NTGSSIRSGG 198
           N GS+Q G+WG GGS   NTGS+   GG
Sbjct: 751 NTGSAQGGSWGTGGSTATNTGSAQGGGG 778

>ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (hnRNP core|
           protein A1-A) (PEN repeat clone P9)
          Length = 365

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +1

Query: 124 NGGSSQMGNWGQGGSNTGSSIRSGGRGNW 210
           NGG    GNW  GG+N G++   GG  NW
Sbjct: 234 NGG----GNWNNGGNNWGNN--RGGNDNW 256

>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog|
          Length = 342

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +1

Query: 130 GSSQMGNWGQGGSNTGSSIRSGGRGNWDG 216
           G    G WG G  + G S   GG G W G
Sbjct: 202 GGGAGGGWGGGRGDWGGSAGGGGGGGWGG 230


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,600,010
Number of Sequences: 219361
Number of extensions: 1651877
Number of successful extensions: 5875
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5792
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5824436538
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)