ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd27d12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 88 4e-14
2gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome... 88 4e-14
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
4dbj|AK103846.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
5dbj|AK063571.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
6dbj|AK061960.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
7dbj|AK058847.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 1e-11
8gb|BT012851.1| Lycopersicon esculentum clone 113930R, mRNA sequence 78 4e-11
9gb|AY360393.2| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
10gb|BT016696.1| Zea mays clone Contig529 mRNA sequence 72 2e-09
11gb|BT017551.1| Zea mays clone EL01N0424D04.c mRNA sequence 72 2e-09
12gb|BT017416.1| Zea mays clone EL01N0401B11.c mRNA sequence 72 2e-09
13gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
14dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
15dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
16gb|U84972.1|NTU84972 Nicotiana tabacum GUT15 mRNA, complete cds 58 4e-05
17gb|U75694.1|STU75694 Solanum tuberosum SRE1b (sre1b) mRNA, compl... 54 6e-04
18gb|U75693.1|STU75693 Solanum tuberosum SRE1a (sre1a) mRNA, compl... 54 6e-04
19gb|U75695.1|STU75695 Solanum tuberosum SRE1c (sre1c) mRNA, compl... 46 0.14
20emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genom... 44 0.54
21ref|NM_127400.2| Arabidopsis thaliana GUT15 (GENE WITH UNSTABLE ... 42 2.1
22gb|U80955.3| Caenorhabditis elegans cosmid T04C9, complete sequence 42 2.1
23emb|CT009748.6| Mouse DNA sequence from clone RP23-120N6 on chro... 42 2.1
24gb|AC107635.16| Mus musculus chromosome 9, clone RP23-24C14, com... 42 2.1
25gb|AC006439.4| Arabidopsis thaliana chromosome 2 clone T30D6 map... 42 2.1
26dbj|AK220588.1| Arabidopsis thaliana mRNA for hypothetical prote... 42 2.1
27emb|BX819089.1|CNS0A9QC Arabidopsis thaliana Full-length cDNA Co... 42 2.1
28emb|BX819088.1|CNS0A9PU Arabidopsis thaliana Full-length cDNA Co... 42 2.1
29emb|BX842045.1|CNS09YAE Arabidopsis thaliana Full-length cDNA Co... 42 2.1
30gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 2.1
31dbj|AK176672.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 42 2.1
32dbj|AK176632.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 42 2.1
33dbj|AK176884.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 42 2.1
34dbj|AK176857.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 42 2.1
35dbj|AK176840.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 42 2.1
36dbj|AK176476.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 42 2.1
37dbj|AK176315.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 42 2.1
38dbj|AK176067.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 42 2.1
39dbj|AK175993.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 42 2.1
40dbj|AK175682.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 42 2.1
41dbj|AK175669.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 42 2.1
42dbj|AK175384.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 42 2.1
43gb|U84973.1|ATU84973 Arabidopsis thaliana GUT15 mRNA, complete cds 42 2.1
44gb|AC137585.3| Mus musculus BAC clone RP23-355I23 from chromosom... 40 8.4
45emb|CR933475.1| Paramecium tetraurelia, Small GTPase ras, putati... 40 8.4
46ref|XM_759868.1| Theileria parva strain Muguga hypothetical prot... 40 8.4
47gb|AC159466.3| Mus musculus 10 BAC RP23-388A21 (Roswell Park Can... 40 8.4
48emb|AL450344.4| Human DNA sequence from clone RP11-136K14 on chr... 40 8.4
49emb|AL137073.13| Human DNA sequence from clone RP11-404F11 on ch... 40 8.4
50dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
51dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
52gb|AC153568.5| Mus musculus 10 BAC RP23-66K22 (Roswell Park Canc... 40 8.4
53dbj|AP006446.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
54dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
55emb|BX548043.5| Zebrafish DNA sequence from clone DKEY-81J8 in l... 40 8.4
56gb|AC101944.16| Mus musculus chromosome 1, clone RP24-118B6, com... 40 8.4 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                                   
Query: 432     ttgtattgataattattcgatgatatttcgataattattagatctaagagat 483
               |||||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 6723108 ttgtattgataattattcgatgaactttcgataattattagatctaagagat 6723159



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 40/40 (100%)
 Strand = Plus / Plus

                                                       
Query: 571     ggcctttgccatgttgggtgcgctcgcatggcaggccacc 610
               ||||||||||||||||||||||||||||||||||||||||
Sbjct: 6723292 ggcctttgccatgttgggtgcgctcgcatggcaggccacc 6723331



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/36 (94%), Gaps = 2/36 (5%)
 Strand = Plus / Plus

                                                   
Query: 496     aaggtaagag--catgtaacaagcgaggtgcttgtg 529
               ||||||||||  ||||||||||||||||||||||||
Sbjct: 6723197 aaggtaagagaacatgtaacaagcgaggtgcttgtg 6723232
to top
>gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1626B05,
              complete sequence
          Length = 127946

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                                  
Query: 432    ttgtattgataattattcgatgatatttcgataattattagatctaagagat 483
              |||||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 108656 ttgtattgataattattcgatgaactttcgataattattagatctaagagat 108707



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 40/40 (100%)
 Strand = Plus / Plus

                                                      
Query: 571    ggcctttgccatgttgggtgcgctcgcatggcaggccacc 610
              ||||||||||||||||||||||||||||||||||||||||
Sbjct: 108840 ggcctttgccatgttgggtgcgctcgcatggcaggccacc 108879



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/36 (94%), Gaps = 2/36 (5%)
 Strand = Plus / Plus

                                                  
Query: 496    aaggtaagag--catgtaacaagcgaggtgcttgtg 529
              ||||||||||  ||||||||||||||||||||||||
Sbjct: 108745 aaggtaagagaacatgtaacaagcgaggtgcttgtg 108780
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                                   
Query: 432     ttgtattgataattattcgatgatatttcgataattattagatctaagagat 483
               |||||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 6722321 ttgtattgataattattcgatgaactttcgataattattagatctaagagat 6722372



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 40/40 (100%)
 Strand = Plus / Plus

                                                       
Query: 571     ggcctttgccatgttgggtgcgctcgcatggcaggccacc 610
               ||||||||||||||||||||||||||||||||||||||||
Sbjct: 6722505 ggcctttgccatgttgggtgcgctcgcatggcaggccacc 6722544



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/36 (94%), Gaps = 2/36 (5%)
 Strand = Plus / Plus

                                                   
Query: 496     aaggtaagag--catgtaacaagcgaggtgcttgtg 529
               ||||||||||  ||||||||||||||||||||||||
Sbjct: 6722410 aaggtaagagaacatgtaacaagcgaggtgcttgtg 6722445
to top
>dbj|AK103846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148J22, full
           insert sequence
          Length = 2465

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                               
Query: 432 ttgtattgataattattcgatgatatttcgataattattagatctaagagat 483
           |||||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 429 ttgtattgataattattcgatgaactttcgataattattagatctaagagat 480



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 40/40 (100%)
 Strand = Plus / Plus

                                                   
Query: 571 ggcctttgccatgttgggtgcgctcgcatggcaggccacc 610
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ggcctttgccatgttgggtgcgctcgcatggcaggccacc 655



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/36 (94%), Gaps = 2/36 (5%)
 Strand = Plus / Plus

                                               
Query: 496 aaggtaagag--catgtaacaagcgaggtgcttgtg 529
           ||||||||||  ||||||||||||||||||||||||
Sbjct: 518 aaggtaagagaacatgtaacaagcgaggtgcttgtg 553
to top
>dbj|AK063571.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-G06, full
           insert sequence
          Length = 585

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                               
Query: 432 ttgtattgataattattcgatgatatttcgataattattagatctaagagat 483
           |||||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 435 ttgtattgataattattcgatgaactttcgataattattagatctaagagat 486



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/36 (94%), Gaps = 2/36 (5%)
 Strand = Plus / Plus

                                               
Query: 496 aaggtaagag--catgtaacaagcgaggtgcttgtg 529
           ||||||||||  ||||||||||||||||||||||||
Sbjct: 524 aaggtaagagaacatgtaacaagcgaggtgcttgtg 559
to top
>dbj|AK061960.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-G02, full
           insert sequence
          Length = 1385

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                               
Query: 432 ttgtattgataattattcgatgatatttcgataattattagatctaagagat 483
           |||||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 435 ttgtattgataattattcgatgaactttcgataattattagatctaagagat 486



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 40/40 (100%)
 Strand = Plus / Plus

                                                   
Query: 571 ggcctttgccatgttgggtgcgctcgcatggcaggccacc 610
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ggcctttgccatgttgggtgcgctcgcatggcaggccacc 658



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 34/36 (94%), Gaps = 2/36 (5%)
 Strand = Plus / Plus

                                               
Query: 496 aaggtaagag--catgtaacaagcgaggtgcttgtg 529
           ||||||||||  ||||||||||||||||||||||||
Sbjct: 524 aaggtaagagaacatgtaacaagcgaggtgcttgtg 559
to top
>dbj|AK058847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-G07, full
           insert sequence
          Length = 695

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 40/40 (100%)
 Strand = Plus / Plus

                                                   
Query: 571 ggcctttgccatgttgggtgcgctcgcatggcaggccacc 610
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 25  ggcctttgccatgttgggtgcgctcgcatggcaggccacc 64
to top
>gb|BT012851.1| Lycopersicon esculentum clone 113930R, mRNA sequence
          Length = 2584

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 39/39 (100%)
 Strand = Plus / Plus

                                                  
Query: 570 aggcctttgccatgttgggtgcgctcgcatggcaggcca 608
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 660 aggcctttgccatgttgggtgcgctcgcatggcaggcca 698
to top
>gb|AY360393.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0096K16,
             complete sequence
          Length = 164501

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                     
Query: 570   aggcctttgccatgttgggtgcgctcgcatggcaggccac 609
             |||||||||||||||||||||||||||| |||||||||||
Sbjct: 33476 aggcctttgccatgttgggtgcgctcgcttggcaggccac 33515
to top
>gb|BT016696.1| Zea mays clone Contig529 mRNA sequence
          Length = 707

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                   
Query: 569 gaggcctttgccatgttgggtgcgctcgcatggcaggcca 608
           ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 595 gaggcctttgccatgatgggtgcgctcgcatggcaggcca 634
to top
>gb|BT017551.1| Zea mays clone EL01N0424D04.c mRNA sequence
          Length = 1171

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                   
Query: 569 gaggcctttgccatgttgggtgcgctcgcatggcaggcca 608
           ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 527 gaggcctttgccatgatgggtgcgctcgcatggcaggcca 566
to top
>gb|BT017416.1| Zea mays clone EL01N0401B11.c mRNA sequence
          Length = 1133

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                   
Query: 569 gaggcctttgccatgttgggtgcgctcgcatggcaggcca 608
           ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 526 gaggcctttgccatgatgggtgcgctcgcatggcaggcca 565
to top
>gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0070J19,
             complete sequence
          Length = 158749

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                     
Query: 570   aggcctttgccatgttgggtgcgctcgcatggcaggccac 609
             |||||||||||||||||||||||||||| |||||||||||
Sbjct: 29767 aggcctttgccatgttgggtgcgctcgcttggcaggccac 29728
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                        
Query: 570      aggcctttgccatgttgggtgcgctcgcatggcaggccac 609
                |||||||||||||||||||||||||||| |||||||||||
Sbjct: 12364064 aggcctttgccatgttgggtgcgctcgcttggcaggccac 12364103
to top
>dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0045D08
          Length = 160541

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                      
Query: 570    aggcctttgccatgttgggtgcgctcgcatggcaggccac 609
              |||||||||||||||||||||||||||| |||||||||||
Sbjct: 122713 aggcctttgccatgttgggtgcgctcgcttggcaggccac 122752
to top
>gb|U84972.1|NTU84972 Nicotiana tabacum GUT15 mRNA, complete cds
          Length = 1670

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 573 cctttgccatgttgggtgcgctcgcatggcagg 605
           ||||||||||| |||||||||||||||||||||
Sbjct: 598 cctttgccatgatgggtgcgctcgcatggcagg 630
to top
>gb|U75694.1|STU75694 Solanum tuberosum SRE1b (sre1b) mRNA, complete cds
          Length = 2467

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 571 ggcctttgccatgttgggtgcgctcgcatggcagg 605
           |||||||||||||  ||||||||||||||||||||
Sbjct: 685 ggcctttgccatgccgggtgcgctcgcatggcagg 719
to top
>gb|U75693.1|STU75693 Solanum tuberosum SRE1a (sre1a) mRNA, complete cds
          Length = 2060

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 571 ggcctttgccatgttgggtgcgctcgcatggcagg 605
           |||||||||||||  ||||||||||||||||||||
Sbjct: 697 ggcctttgccatgacgggtgcgctcgcatggcagg 731
to top
>gb|U75695.1|STU75695 Solanum tuberosum SRE1c (sre1c) mRNA, complete cds
          Length = 2395

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 571 ggcctttgccatgttgggtgcgctcgcatggcagg 605
           |||||||| ||||  ||||||||||||||||||||
Sbjct: 711 ggcctttgtcatgccgggtgcgctcgcatggcagg 745
to top
>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16
          Length = 349640

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 340    ggcggtctcgagctggcgcggcggcg 365
              ||||||||||||| ||||||||||||
Sbjct: 139650 ggcggtctcgagcgggcgcggcggcg 139675
to top
>ref|NM_127400.2| Arabidopsis thaliana GUT15 (GENE WITH UNSTABLE TRANSCRIPT 15)
           AT2G18440 (GUT15) mRNA, complete cds
          Length = 1190

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 573 cctttgccatgttgggtgcgctcgcatggcagg 605
           ||||||||||||  |||||||| ||||||||||
Sbjct: 265 cctttgccatgtcaggtgcgcttgcatggcagg 297
to top
>gb|U80955.3| Caenorhabditis elegans cosmid T04C9, complete sequence
          Length = 34791

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 447   ttcgatgatatttcgataatt 467
             |||||||||||||||||||||
Sbjct: 23712 ttcgatgatatttcgataatt 23692
to top
>emb|CT009748.6| Mouse DNA sequence from clone RP23-120N6 on chromosome 9, complete
             sequence
          Length = 235839

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 75    tagatccagcctcctggcctccagt 99
             |||||||||||| ||||||||||||
Sbjct: 79180 tagatccagcctgctggcctccagt 79204
to top
>gb|AC107635.16| Mus musculus chromosome 9, clone RP23-24C14, complete sequence
          Length = 214285

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 75    tagatccagcctcctggcctccagt 99
             |||||||||||| ||||||||||||
Sbjct: 16028 tagatccagcctgctggcctccagt 16004
to top
>gb|AC006439.4| Arabidopsis thaliana chromosome 2 clone T30D6 map mi39, complete
             sequence
          Length = 92861

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 573   cctttgccatgttgggtgcgctcgcatggcagg 605
             ||||||||||||  |||||||| ||||||||||
Sbjct: 18811 cctttgccatgtcaggtgcgcttgcatggcagg 18843
to top
>dbj|AK220588.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL17-28-H23
          Length = 983

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 573 cctttgccatgttgggtgcgctcgcatggcagg 605
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
to top
>emb|BX819089.1|CNS0A9QC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB44ZG08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1314

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 573 cctttgccatgttgggtgcgctcgcatggcagg 605
           ||||||||||||  |||||||| ||||||||||
Sbjct: 437 cctttgccatgtcaggtgcgcttgcatggcagg 469
to top
>emb|BX819088.1|CNS0A9PU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB44ZF08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1307

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 573 cctttgccatgttgggtgcgctcgcatggcagg 605
           ||||||||||||  |||||||| ||||||||||
Sbjct: 437 cctttgccatgtcaggtgcgcttgcatggcagg 469
to top
>emb|BX842045.1|CNS09YAE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH69ZH05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1180

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 573 cctttgccatgttgggtgcgctcgcatggcagg 605
           ||||||||||||  |||||||| ||||||||||
Sbjct: 430 cctttgccatgtcaggtgcgcttgcatggcagg 462
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 348     cgagctggcgcggcggcgggc 368
               |||||||||||||||||||||
Sbjct: 1105598 cgagctggcgcggcggcgggc 1105618
to top
>dbj|AK176672.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-20-O10
          Length = 1382

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 573 cctttgccatgttgggtgcgctcgcatggcagg 605
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
to top
>dbj|AK176632.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-17-A12
          Length = 1001

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 573 cctttgccatgttgggtgcgctcgcatggcagg 605
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
to top
>dbj|AK176884.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-44-H16
          Length = 1372

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 573 cctttgccatgttgggtgcgctcgcatggcagg 605
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
to top
>dbj|AK176857.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-41-F13
          Length = 731

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 573 cctttgccatgttgggtgcgctcgcatggcagg 605
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
to top
>dbj|AK176840.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-40-B17
          Length = 734

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 573 cctttgccatgttgggtgcgctcgcatggcagg 605
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
to top
>dbj|AK176476.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL24-27-I20
          Length = 986

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 573 cctttgccatgttgggtgcgctcgcatggcagg 605
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
to top
>dbj|AK176315.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL23-27-P21
          Length = 1000

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 573 cctttgccatgttgggtgcgctcgcatggcagg 605
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
to top
>dbj|AK176067.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL22-80-M09
          Length = 1373

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 573 cctttgccatgttgggtgcgctcgcatggcagg 605
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
to top
>dbj|AK175993.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL22-69-A04
          Length = 1373

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 573 cctttgccatgttgggtgcgctcgcatggcagg 605
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
to top
>dbj|AK175682.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL22-19-L10
          Length = 1373

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 573 cctttgccatgttgggtgcgctcgcatggcagg 605
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
to top
>dbj|AK175669.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL22-16-F01
          Length = 1373

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 573 cctttgccatgttgggtgcgctcgcatggcagg 605
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
to top
>dbj|AK175384.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-82-G23
          Length = 1372

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 573 cctttgccatgttgggtgcgctcgcatggcagg 605
           ||||||||||||  |||||||| ||||||||||
Sbjct: 447 cctttgccatgtcaggtgcgcttgcatggcagg 479
to top
>gb|U84973.1|ATU84973 Arabidopsis thaliana GUT15 mRNA, complete cds
          Length = 1377

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 573 cctttgccatgttgggtgcgctcgcatggcagg 605
           ||||||||||||  |||||||| ||||||||||
Sbjct: 431 cctttgccatgtcaggtgcgcttgcatggcagg 463
to top
>gb|AC137585.3| Mus musculus BAC clone RP23-355I23 from chromosome 18, complete sequence
          Length = 216041

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     ctctagatccagcctcctgg 91
              ||||||||||||||||||||
Sbjct: 106363 ctctagatccagcctcctgg 106344
to top
>emb|CR933475.1| Paramecium tetraurelia, Small GTPase ras, putative, complete gene
          Length = 3001

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 462  ataattattagatctaagag 481
            ||||||||||||||||||||
Sbjct: 2073 ataattattagatctaagag 2054
to top
>ref|XM_759868.1| Theileria parva strain Muguga hypothetical protein (TP02_0395)
           partial mRNA
          Length = 1401

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 462 ataattattagatctaagag 481
           ||||||||||||||||||||
Sbjct: 235 ataattattagatctaagag 254
to top
>gb|AC159466.3| Mus musculus 10 BAC RP23-388A21 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 190140

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   tctgttgctgatttgatgct 316
             ||||||||||||||||||||
Sbjct: 56500 tctgttgctgatttgatgct 56519
to top
>emb|AL450344.4| Human DNA sequence from clone RP11-136K14 on chromosome 6 Contains
             three novel genes, the 5' end of a novel gene (contains
             FLJ31738 and KIAA1209) and a CpG island, complete sequence
          Length = 150005

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 519   aggtgcttgtggtgagggga 538
             ||||||||||||||||||||
Sbjct: 64409 aggtgcttgtggtgagggga 64390
to top
>emb|AL137073.13| Human DNA sequence from clone RP11-404F11 on chromosome 9p23-24.1
              Contains a novel gene encoding a protein similar to
              bacterial N-acetylneuraminic acid condensing enzyme (NEUB)
              and 3' end of the TBCID2 gene, a TRIM14 gene encoding
              tripartite motif-containing 14 (KIAA0129), the CORO2A gene
              encoding Coronin 2A (actin-binding protein), TBC1D2 gene
              encoding TBC1 domain family, member 2 (PARIS1,
              PARIS-1,DKFZP761D1823, DKFZp761D1823), and 4 CpG islands,
              complete sequence
          Length = 201300

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    gatccctgggcaaggtgagg 139
              ||||||||||||||||||||
Sbjct: 160784 gatccctgggcaaggtgagg 160765
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 106     atcgaatccgcttcgatccc 125
               ||||||||||||||||||||
Sbjct: 4713500 atcgaatccgcttcgatccc 4713519
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 106      atcgaatccgcttcgatccc 125
                ||||||||||||||||||||
Sbjct: 18437712 atcgaatccgcttcgatccc 18437731
to top
>gb|AC153568.5| Mus musculus 10 BAC RP23-66K22 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 186215

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 297    tctgttgctgatttgatgct 316
              ||||||||||||||||||||
Sbjct: 169521 tctgttgctgatttgatgct 169540
to top
>dbj|AP006446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1097H10
          Length = 159732

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   atcgaatccgcttcgatccc 125
             ||||||||||||||||||||
Sbjct: 31104 atcgaatccgcttcgatccc 31123
to top
>dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0001A11
          Length = 153252

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    atcgaatccgcttcgatccc 125
              ||||||||||||||||||||
Sbjct: 100636 atcgaatccgcttcgatccc 100655
to top
>emb|BX548043.5| Zebrafish DNA sequence from clone DKEY-81J8 in linkage group 10, complete
              sequence
          Length = 156034

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 561    aacatctagaggcctttgcc 580
              ||||||||||||||||||||
Sbjct: 127019 aacatctagaggcctttgcc 127000
to top
>gb|AC101944.16| Mus musculus chromosome 1, clone RP24-118B6, complete sequence
          Length = 174560

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 74     ctagatccagcctcctggcctcca 97
              ||||||||||||||| ||||||||
Sbjct: 107771 ctagatccagcctccgggcctcca 107794


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,095,948
Number of Sequences: 3902068
Number of extensions: 4095948
Number of successful extensions: 77255
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76731
Number of HSP's gapped (non-prelim): 524
length of query: 619
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 596
effective length of database: 17,143,297,704
effective search space: 10217405431584
effective search space used: 10217405431584
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top