| Clone Name | basd27d11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 862 bits (435), Expect = 0.0 Identities = 447/450 (99%), Gaps = 1/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 120050 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 119992 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119991 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 119932 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119931 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 119872 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119871 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 119812 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119811 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 119752 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119751 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 119692 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119691 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 119632 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 119631 aaatactcctgggtgaccgatagcgaagta 119602 Score = 862 bits (435), Expect = 0.0 Identities = 447/450 (99%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 94844 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 94902 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94903 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 94962 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94963 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95022 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95023 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 95082 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95083 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 95142 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95143 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 95202 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95203 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 95262 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 95263 aaatactcctgggtgaccgatagcgaagta 95292
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 854 bits (431), Expect = 0.0 Identities = 446/450 (99%), Gaps = 1/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 961 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 903 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 902 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 843 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 842 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 783 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 723 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 663 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 662 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 603 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 602 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 543 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 542 aaatactcctgggtgaccgatagcgaagta 513
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 854 bits (431), Expect = 0.0 Identities = 446/450 (99%), Gaps = 1/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 44875 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 44817 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 44816 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 44757 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44756 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 44697 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44696 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 44637 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44636 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 44577 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 44576 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 44517 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44516 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 44457 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 44456 aaatactcctgggtgaccgatagcgaagta 44427 Score = 854 bits (431), Expect = 0.0 Identities = 446/450 (99%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 20243 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 20301 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 20302 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 20361 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20362 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 20421 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20422 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 20481 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20482 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 20541 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 20542 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 20601 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20602 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 20661 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 20662 aaatactcctgggtgaccgatagcgaagta 20691
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 854 bits (431), Expect = 0.0 Identities = 446/450 (99%), Gaps = 1/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 1504 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 1446 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1445 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 1386 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1385 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 1326 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1325 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 1266 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1265 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 1206 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1205 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 1146 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1145 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 1086 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 1085 aaatactcctgggtgaccgatagcgaagta 1056
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 854 bits (431), Expect = 0.0 Identities = 446/450 (99%), Gaps = 1/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 123714 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 123656 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123655 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 123596 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123595 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 123536 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123535 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 123476 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123475 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 123416 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123415 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 123356 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123355 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 123296 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 123295 aaatactcctgggtgaccgatagcgaagta 123266 Score = 854 bits (431), Expect = 0.0 Identities = 446/450 (99%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 99123 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 99181 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 99182 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 99241 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99242 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 99301 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99302 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 99361 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99362 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 99421 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 99422 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 99481 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99482 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 99541 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 99542 aaatactcctgggtgaccgatagcgaagta 99571
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 854 bits (431), Expect = 0.0 Identities = 446/450 (99%), Gaps = 1/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 124431 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 124373 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 124372 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 124313 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124312 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 124253 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124252 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 124193 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124192 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 124133 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 124132 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 124073 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124072 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 124013 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 124012 aaatactcctgggtgaccgatagcgaagta 123983 Score = 854 bits (431), Expect = 0.0 Identities = 446/450 (99%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 99800 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 99858 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 99859 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 99918 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99919 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 99978 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99979 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 100038 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100039 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 100098 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 100099 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 100158 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100159 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 100218 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 100219 aaatactcctgggtgaccgatagcgaagta 100248
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 118831 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 118773 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 118772 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 118713 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118712 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 118653 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118652 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 118593 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118592 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 118533 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 118532 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 118473 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118472 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 118413 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 118412 aaatactcctgggtgaccgatagcgaagta 118383
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 119915 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 119857 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119856 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 119797 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119796 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 119737 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119736 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 119677 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119676 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 119617 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119616 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 119557 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119556 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 119497 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 119496 aaatactcctgggtgaccgatagcgaagta 119467 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 95241 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 95299 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95300 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 95359 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95360 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95419 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95420 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 95479 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95480 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 95539 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95540 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 95599 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95600 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 95659 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 95660 aaatactcctgggtgaccgatagcgaagta 95689
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 119915 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 119857 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119856 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 119797 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119796 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 119737 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119736 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 119677 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119676 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 119617 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119616 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 119557 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119556 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 119497 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 119496 aaatactcctgggtgaccgatagcgaagta 119467 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 95241 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 95299 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95300 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 95359 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95360 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95419 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95420 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 95479 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95480 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 95539 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95540 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 95599 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95600 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 95659 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 95660 aaatactcctgggtgaccgatagcgaagta 95689
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 119864 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 119806 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119805 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 119746 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119745 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 119686 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119685 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 119626 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119625 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 119566 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119565 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 119506 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119505 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 119446 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 119445 aaatactcctgggtgaccgatagcgaagta 119416 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 95186 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 95244 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95245 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 95304 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95305 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95364 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95365 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 95424 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95425 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 95484 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95485 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 95544 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95545 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 95604 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 95605 aaatactcctgggtgaccgatagcgaagta 95634
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 31507819 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 31507877 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 31507878 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 31507937 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507938 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 31507997 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507998 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 31508057 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508058 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 31508117 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 31508118 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 31508177 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508178 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 31508237 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 31508238 aaatactcctgggtgaccgatagcgaagta 31508267
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 84777 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 84719 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 84718 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 84659 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84658 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 84599 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84598 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 84539 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84538 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 84479 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 84478 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 84419 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84418 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 84359 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 84358 aaatactcctgggtgaccgatagcgaagta 84329
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 119884 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 119826 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119825 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 119766 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119765 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 119706 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119705 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 119646 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119645 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 119586 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119585 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 119526 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119525 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 119466 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 119465 aaatactcctgggtgaccgatagcgaagta 119436 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 95234 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 95292 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95293 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 95352 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95353 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95412 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95413 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 95472 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95473 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 95532 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95533 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 95592 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95593 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 95652 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 95653 aaatactcctgggtgaccgatagcgaagta 95682
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 122283 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 122341 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 122342 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 122401 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122402 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 122461 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122462 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 122521 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122522 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 122581 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 122582 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 122641 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122642 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 122701 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 122702 aaatactcctgggtgaccgatagcgaagta 122731 Score = 839 bits (423), Expect = 0.0 Identities = 444/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 14008 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 14066 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 14067 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 14126 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14127 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 14186 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14187 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 14246 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14247 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 14306 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 14307 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 14366 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 14367 ccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggct 14426 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 14427 aaatactcctgggtgaccgatagcgaagta 14456
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 93412 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 93470 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 93471 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 93530 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93531 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 93590 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93591 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 93650 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93651 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 93710 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 93711 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 93770 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93771 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 93830 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 93831 aaatactcctgggtgaccgatagcgaagta 93860
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 58603 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 58545 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 58544 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 58485 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58484 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 58425 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58424 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 58365 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58364 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 58305 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 58304 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 58245 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58244 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 58185 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 58184 aaatactcctgggtgaccgatagcgaagta 58155
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 27476 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 27534 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 27535 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 27594 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27595 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 27654 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27655 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 27714 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27715 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 27774 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 27775 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 27834 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27835 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 27894 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 27895 aaatactcctgggtgaccgatagcgaagta 27924
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 9268168 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 9268226 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9268227 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 9268286 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268287 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 9268346 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268347 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 9268406 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268407 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 9268466 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9268467 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 9268526 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268527 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 9268586 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 9268587 aaatactcctgggtgaccgatagcgaagta 9268616 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 9227668 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 9227726 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9227727 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 9227786 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227787 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 9227846 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227847 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 9227906 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227907 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 9227966 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9227967 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 9228026 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228027 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 9228086 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 9228087 aaatactcctgggtgaccgatagcgaagta 9228116 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 9164257 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 9164315 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9164316 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 9164375 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164376 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 9164435 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164436 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 9164495 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164496 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 9164555 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9164556 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 9164615 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164616 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 9164675 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 9164676 aaatactcctgggtgaccgatagcgaagta 9164705 Score = 839 bits (423), Expect = 0.0 Identities = 444/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 9056082 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 9056140 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9056141 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 9056200 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056201 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 9056260 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056261 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 9056320 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056321 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 9056380 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9056381 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 9056440 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9056441 ccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggct 9056500 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 9056501 aaatactcctgggtgaccgatagcgaagta 9056530
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 19938153 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 19938211 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 19938212 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 19938271 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938272 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 19938331 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938332 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 19938391 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938392 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 19938451 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 19938452 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 19938511 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938512 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 19938571 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 19938572 aaatactcctgggtgaccgatagcgaagta 19938601 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 10387020 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 10387078 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10387079 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 10387138 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 10387198 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 10387258 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387259 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 10387318 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10387319 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 10387378 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387379 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 10387438 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 10387439 aaatactcctgggtgaccgatagcgaagta 10387468 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 10277278 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 10277220 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10277219 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 10277160 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277159 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 10277100 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277099 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 10277040 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277039 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 10276980 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10276979 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 10276920 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276919 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 10276860 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 10276859 aaatactcctgggtgaccgatagcgaagta 10276830 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 275 ttgtgctgctaggcgaagcggttgagtgc 303 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 31598335 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 31598393 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 31598394 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 31598453 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598454 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 31598513 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598514 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 31598573 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598574 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 31598633 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 31598634 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 31598693 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598694 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 31598753 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 31598754 aaatactcctgggtgaccgatagcgaagta 31598783
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 33525651 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 33525709 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 33525710 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 33525769 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525770 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 33525829 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525830 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 33525889 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525890 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 33525949 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 33525950 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 33526009 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526010 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 33526069 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 33526070 aaatactcctgggtgaccgatagcgaagta 33526099 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 25 acgaggaagggcgtagcaagcgacgaaatgcttc 58 |||||| ||||| ||||||||||||||||||||| Sbjct: 19455163 acgaggtagggcatagcaagcgacgaaatgcttc 19455196
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 47890 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 47832 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 47831 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 47772 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47771 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 47712 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47711 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 47652 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47651 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 47592 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 47591 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 47532 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47531 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 47472 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 47471 aaatactcctgggtgaccgatagcgaagta 47442
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 70848 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 70906 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 70907 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 70966 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70967 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 71026 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71027 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 71086 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71087 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 71146 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 71147 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 71206 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71207 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 71266 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 71267 aaatactcctgggtgaccgatagcgaagta 71296
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 20 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 78 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 138 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 259 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 318 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 319 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 378 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 438 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 439 aaatactcctgggtgaccgatagcgaagta 468
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 21 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 79 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 80 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 139 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 199 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 259 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 260 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 319 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 320 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 379 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 439 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 440 aaatactcctgggtgaccgatagcgaagta 469
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 17 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 75 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 76 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 135 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 195 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 255 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 315 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 316 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 375 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 435 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 436 aaatactcctgggtgaccgatagcgaagta 465
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 19949429 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 19949487 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 19949488 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 19949547 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949548 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 19949607 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949608 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 19949667 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949668 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 19949727 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 19949728 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 19949787 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949788 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 19949847 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 19949848 aaatactcctgggtgaccgatagcgaagta 19949877 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 10393059 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 10393117 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10393118 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 10393177 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393178 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 10393237 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393238 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 10393297 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393298 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 10393357 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10393358 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 10393417 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393418 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 10393477 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 10393478 aaatactcctgggtgaccgatagcgaagta 10393507 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 10283317 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 10283259 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10283258 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 10283199 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283198 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 10283139 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283138 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 10283079 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283078 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 10283019 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10283018 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 10282959 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282958 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 10282899 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 10282898 aaatactcctgggtgaccgatagcgaagta 10282869 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 275 ttgtgctgctaggcgaagcggttgagtgc 303 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 119858 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 119800 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119799 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 119740 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119739 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 119680 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119679 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 119620 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119619 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 119560 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119559 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 119500 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119499 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 119440 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 119439 aaatactcctgggtgaccgatagcgaagta 119410 Score = 846 bits (427), Expect = 0.0 Identities = 445/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 95181 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 95239 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95240 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 95299 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95300 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95359 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95360 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 95419 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95420 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 95479 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95480 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 95539 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95540 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 95599 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 95600 aaatactcctgggtgaccgatagcgaagta 95629
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 839 bits (423), Expect = 0.0 Identities = 444/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 140816 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 140874 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 140875 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 140934 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140935 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 140994 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140995 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 141054 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141055 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 141114 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 141115 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 141174 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 141175 ccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggct 141234 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 141235 aaatactcctgggtgaccgatagcgaagta 141264
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 839 bits (423), Expect = 0.0 Identities = 444/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 9242113 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 9242055 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9242054 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 9241995 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241994 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 9241935 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9241934 gaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaaacc 9241875 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241874 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 9241815 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9241814 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 9241755 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241754 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 9241695 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 9241694 aaatactcctgggtgaccgatagcgaagta 9241665 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 157 actgaaacatcttagtagccagaggaaaagaaag 190 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 839 bits (423), Expect = 0.0 Identities = 444/450 (98%), Gaps = 1/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 53326 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 53268 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 53267 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 53208 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53207 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 53148 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 53147 gaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaaacc 53088 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53087 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 53028 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 53027 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 52968 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52967 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 52908 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 52907 aaatactcctgggtgaccgatagcgaagta 52878
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 819 bits (413), Expect = 0.0 Identities = 422/425 (99%) Strand = Plus / Plus Query: 26 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 85 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 Query: 86 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 145 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 120 Query: 146 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 Query: 206 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 Query: 266 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 325 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 Query: 326 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 385 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 301 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 360 Query: 386 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 Query: 446 aagta 450 ||||| Sbjct: 421 aagta 425
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 793 bits (400), Expect = 0.0 Identities = 441/451 (97%), Gaps = 3/451 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaag-ggcgtagcaagcgacgaaatgcttcg 59 ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 123654 ggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcg 123596 Query: 60 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 119 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 123595 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 123536 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123535 tgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 123476 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123475 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 123416 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 299 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 123415 cgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttga 123356 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||| Sbjct: 123355 gtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctga 123297 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123296 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 123237 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 123236 taaatactcctgggtgaccgatagcgaagta 123206 Score = 793 bits (400), Expect = 0.0 Identities = 441/451 (97%), Gaps = 3/451 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaag-ggcgtagcaagcgacgaaatgcttcg 59 ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 99083 ggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcg 99141 Query: 60 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 119 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 99142 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 99201 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99202 tgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 99261 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99262 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 99321 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 299 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 99322 cgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttga 99381 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||| Sbjct: 99382 gtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctga 99440 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99441 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 99500 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 99501 taaatactcctgggtgaccgatagcgaagta 99531
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 793 bits (400), Expect = 0.0 Identities = 441/451 (97%), Gaps = 3/451 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaag-ggcgtagcaagcgacgaaatgcttcg 59 ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 5436 ggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcg 5494 Query: 60 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 119 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 5495 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 5554 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5555 tgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 5614 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5615 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 5674 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 299 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 5675 cgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttga 5734 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||| Sbjct: 5735 gtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctga 5793 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5794 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 5853 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 5854 taaatactcctgggtgaccgatagcgaagta 5884
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 793 bits (400), Expect = 0.0 Identities = 441/451 (97%), Gaps = 3/451 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaag-ggcgtagcaagcgacgaaatgcttcg 59 ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 24 ggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcg 82 Query: 60 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 119 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 83 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 142 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 tgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 202 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 262 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 299 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 263 cgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttga 322 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||| Sbjct: 323 gtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctga 381 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 441 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 442 taaatactcctgggtgaccgatagcgaagta 472
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 775 bits (391), Expect = 0.0 Identities = 437/450 (97%), Gaps = 2/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 136569 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 136511 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 136510 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcaaactgc-t 136452 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136451 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 136392 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136391 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 136332 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 136331 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 136272 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 136271 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 136212 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136211 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 136152 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 136151 aaatactcctgggtgaccgatagcgaagta 136122 Score = 775 bits (391), Expect = 0.0 Identities = 437/450 (97%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 105856 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 105914 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 105915 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcaaactgc-t 105973 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105974 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106033 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106034 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106093 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 106094 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 106153 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 106154 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 106213 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106214 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 106273 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 106274 aaatactcctgggtgaccgatagcgaagta 106303
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 767 bits (387), Expect = 0.0 Identities = 436/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 132753 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 132695 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 132694 ggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-t 132636 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132635 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 132576 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132575 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 132516 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 132515 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaa 132456 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 132455 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgac 132396 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132395 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 132336 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 132335 aaatactcctgggtgaccgatagcgaagta 132306 Score = 767 bits (387), Expect = 0.0 Identities = 436/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 104125 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 104183 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 104184 ggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-t 104242 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104243 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 104302 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104303 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 104362 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 104363 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaa 104422 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104423 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgac 104482 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104483 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 104542 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 104543 aaatactcctgggtgaccgatagcgaagta 104572
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 767 bits (387), Expect = 0.0 Identities = 436/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 132976 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 132918 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 132917 ggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-t 132859 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132858 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 132799 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132798 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 132739 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| Sbjct: 132738 gtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggag 132679 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 132678 tgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgac 132619 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132618 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 132559 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 132558 aaatactcctgggtgaccgatagcgaagta 132529 Score = 767 bits (387), Expect = 0.0 Identities = 436/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 103788 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 103846 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 103847 ggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-t 103905 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103906 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 103965 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103966 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 104025 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| Sbjct: 104026 gtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggag 104085 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 104086 tgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgac 104145 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104146 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 104205 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 104206 aaatactcctgggtgaccgatagcgaagta 104235
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 767 bits (387), Expect = 0.0 Identities = 436/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 132746 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 132688 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 132687 ggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-t 132629 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132628 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 132569 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132568 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 132509 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 132508 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaa 132449 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 132448 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgac 132389 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 132329 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 132328 aaatactcctgggtgaccgatagcgaagta 132299 Score = 767 bits (387), Expect = 0.0 Identities = 436/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 104123 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 104181 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 104182 ggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-t 104240 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104241 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 104300 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104301 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 104360 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 104361 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaa 104420 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104421 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgac 104480 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104481 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 104540 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 104541 aaatactcctgggtgaccgatagcgaagta 104570
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 759 bits (383), Expect = 0.0 Identities = 435/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 131645 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 131587 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 131586 ggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-t 131528 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131527 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 131468 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131467 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 131408 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 131407 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaa 131348 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 131347 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgac 131288 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131287 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 131228 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 131227 aaatactcctgggtgaccgatagcgaagta 131198 Score = 759 bits (383), Expect = 0.0 Identities = 435/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 102990 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 103048 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 103049 ggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-t 103107 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103108 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 103167 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103168 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 103227 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 103228 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaa 103287 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 103288 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgac 103347 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103348 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 103407 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 103408 aaatactcctgggtgaccgatagcgaagta 103437
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 759 bits (383), Expect = 0.0 Identities = 435/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 139564 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 139506 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 139505 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 139447 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139446 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 139387 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139386 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 139327 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 139326 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 139267 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | |||||||||||||| | |||||||||||||||||||||||| ||||| |||||||| Sbjct: 139266 tactgcaccctagatggcgagagtccagtagccgaaagcatcactggcttacgctctgac 139207 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139206 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 139147 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 139146 aaatactcctgggtgaccgatagcgaagta 139117 Score = 759 bits (383), Expect = 0.0 Identities = 435/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 110381 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 110439 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 110440 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 110498 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110499 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 110558 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110559 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 110618 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 110619 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 110678 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | |||||||||||||| | |||||||||||||||||||||||| ||||| |||||||| Sbjct: 110679 tactgcaccctagatggcgagagtccagtagccgaaagcatcactggcttacgctctgac 110738 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110739 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 110798 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 110799 aaatactcctgggtgaccgatagcgaagta 110828
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 759 bits (383), Expect = 0.0 Identities = 435/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 88 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 89 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 147 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagag 207 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 327 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 328 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 387 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 447 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 448 aaatactcctgggtgaccgatagcgaagta 477
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 759 bits (383), Expect = 0.0 Identities = 435/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 88 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 89 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 147 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagag 207 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 327 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 328 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 387 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 447 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 448 aaatactcctgggtgaccgatagcgaagta 477
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 759 bits (383), Expect = 0.0 Identities = 435/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 134201 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 134143 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 134142 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 134084 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134083 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 134024 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134023 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 133964 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 133963 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaa 133904 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 133903 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 133844 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133843 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 133784 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 133783 aaatactcctgggtgaccgatagcgaagta 133754 Score = 759 bits (383), Expect = 0.0 Identities = 435/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 103770 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 103828 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 103829 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 103887 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103888 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 103947 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103948 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 104007 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 104008 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaa 104067 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 104068 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 104127 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104128 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 104187 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 104188 aaatactcctgggtgaccgatagcgaagta 104217
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 759 bits (383), Expect = 0.0 Identities = 435/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 133937 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 133879 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 133878 ggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-t 133820 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133819 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 133760 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133759 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 133700 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||| | |||||| |||||||||||||||||||| ||| Sbjct: 133699 gtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggag 133640 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 133639 tgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgac 133580 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133579 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 133520 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 133519 aaatactcctgggtgaccgatagcgaagta 133490 Score = 759 bits (383), Expect = 0.0 Identities = 435/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 104712 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 104770 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 104771 ggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-t 104829 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104830 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 104889 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104890 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 104949 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||| | |||||| |||||||||||||||||||| ||| Sbjct: 104950 gtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggag 105009 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 105010 tgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgac 105069 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105070 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 105129 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 105130 aaatactcctgggtgaccgatagcgaagta 105159
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 751 bits (379), Expect = 0.0 Identities = 434/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 140338 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 140280 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 140279 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 140221 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140220 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 140161 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140160 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 140101 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 140100 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaa 140041 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 140040 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 139981 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139980 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 139921 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 139920 aaatactcctgggtgaccgatagcgaagta 139891 Score = 751 bits (379), Expect = 0.0 Identities = 434/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 109722 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 109780 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 109781 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 109839 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109840 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 109899 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109900 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 109959 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 109960 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaa 110019 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 110020 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 110079 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110080 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 110139 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 110140 aaatactcctgggtgaccgatagcgaagta 110169
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 751 bits (379), Expect = 0.0 Identities = 434/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 134959 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 134901 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 134900 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 134842 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134841 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 134782 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134781 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 134722 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 134721 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggag 134662 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||||| |||||||||||||||||||||||||||||| | ||| || Sbjct: 134661 tgctgcaccctagatggctagagtccagtagccgaaagcatcactagcttacgttctaac 134602 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134601 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 134542 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 134541 aaatactcctgggtgaccgatagcgaagta 134512 Score = 751 bits (379), Expect = 0.0 Identities = 434/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 105323 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 105381 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 105382 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 105440 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105441 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 105500 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105501 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 105560 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 105561 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggag 105620 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||||| |||||||||||||||||||||||||||||| | ||| || Sbjct: 105621 tgctgcaccctagatggctagagtccagtagccgaaagcatcactagcttacgttctaac 105680 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105681 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 105740 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 105741 aaatactcctgggtgaccgatagcgaagta 105770
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 751 bits (379), Expect = 0.0 Identities = 434/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 21 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 79 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 80 ggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-t 138 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||| | |||||| |||||||||||||||||||| ||| Sbjct: 259 gtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggag 318 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 |||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||| Sbjct: 319 tgccgcaccctagatggcgagagtccagtagccgagagcatcactagcttatgctctgac 378 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 438 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 439 aaatactcctgggtgaccgatagcgaagta 468
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 751 bits (379), Expect = 0.0 Identities = 434/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 88 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 89 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 147 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagag 207 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 327 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | ||||||||||||||||||||| |||||||| |||||||| Sbjct: 328 tgctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgac 387 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 447 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 448 aaatactcctgggtgaccgatagcgaagta 477
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 751 bits (379), Expect = 0.0 Identities = 434/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 88 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 89 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 147 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagag 207 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggag 327 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 328 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 387 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 447 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 448 aaatactcctgggtgaccgatagcgaagta 477
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 751 bits (379), Expect = 0.0 Identities = 434/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 88 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 89 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 147 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagag 207 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 327 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | ||||||||||||||||||||| |||||||| |||||||| Sbjct: 328 tgctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgac 387 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 447 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 448 aaatactcctgggtgaccgatagcgaagta 477
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 751 bits (379), Expect = 0.0 Identities = 434/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 127842 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 127784 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 127783 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 127725 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127724 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 127665 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 127664 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaacc 127605 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 127604 gtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggag 127545 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | |||||||||||||||| ||||||||||||| |||||||| Sbjct: 127544 tgctgcaccctagatggcgagagtccagtagccgaaaacatcactagcttacgctctgac 127485 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127484 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 127425 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 127424 aaatactcctgggtgaccgatagcgaagta 127395 Score = 751 bits (379), Expect = 0.0 Identities = 434/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 107080 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 107138 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 107139 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 107197 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107198 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 107257 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 107258 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaacc 107317 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 107318 gtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggag 107377 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | |||||||||||||||| ||||||||||||| |||||||| Sbjct: 107378 tgctgcaccctagatggcgagagtccagtagccgaaaacatcactagcttacgctctgac 107437 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107438 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 107497 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 107498 aaatactcctgggtgaccgatagcgaagta 107527
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 751 bits (379), Expect = 0.0 Identities = 434/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | ||||||| |||||||| ||||||||||||||||||| Sbjct: 130513 ggtggatacctaggcacccagag-acgaggaggggcgtagtaagcgacgaaatgcttcgg 130455 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | | Sbjct: 130454 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactac-t 130396 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130395 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 130336 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130335 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 130276 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| Sbjct: 130275 gtgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggag 130216 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 130215 tgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgac 130156 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130155 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 130096 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||| |||||| Sbjct: 130095 aaatactcctgggtgaccgatagtgaagta 130066 Score = 751 bits (379), Expect = 0.0 Identities = 434/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | ||||||| |||||||| ||||||||||||||||||| Sbjct: 101943 ggtggatacctaggcacccagag-acgaggaggggcgtagtaagcgacgaaatgcttcgg 102001 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | | Sbjct: 102002 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactac-t 102060 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102061 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 102120 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102121 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 102180 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| Sbjct: 102181 gtgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggag 102240 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 102241 tgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgac 102300 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102301 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 102360 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||| |||||| Sbjct: 102361 aaatactcctgggtgaccgatagtgaagta 102390
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 743 bits (375), Expect = 0.0 Identities = 433/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 142086 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 142028 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| | Sbjct: 142027 ggagttgaaaataagcatagatccggagattcccgaatgggtcaacctttcgaactgc-t 141969 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141968 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 141909 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141908 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 141849 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 141848 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgag 141789 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | |||||||||||||| | ||||||||| |||||||||||||| ||||| |||||||| Sbjct: 141788 tactgcaccctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctgac 141729 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 141728 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggct 141669 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 141668 aaatactcctgggtgaccgatagcgaagta 141639 Score = 743 bits (375), Expect = 0.0 Identities = 433/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 111571 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 111629 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| | Sbjct: 111630 ggagttgaaaataagcatagatccggagattcccgaatgggtcaacctttcgaactgc-t 111688 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111689 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 111748 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111749 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 111808 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 111809 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgag 111868 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | |||||||||||||| | ||||||||| |||||||||||||| ||||| |||||||| Sbjct: 111869 tactgcaccctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctgac 111928 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 111929 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggct 111988 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 111989 aaatactcctgggtgaccgatagcgaagta 112018
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 743 bits (375), Expect = 0.0 Identities = 433/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||| |||||||||| || |||||||||||||||| Sbjct: 46274 ggtggatacctaggcacccagag-acgaagaagggcgtattaatcgacgaaatgcttcgg 46332 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 46333 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 46391 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 46392 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccagag 46451 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 46452 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaacc 46511 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 46512 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 46571 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 46572 taccgcaccctagatggctagagtccagtagccgaaagcatcactagcttatgctctgac 46631 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46632 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 46691 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 46692 aaatactcctgggtgaccgatagcgaagta 46721
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 743 bits (375), Expect = 0.0 Identities = 433/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 88 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 || ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 89 ggggttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 147 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagag 207 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 327 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | ||||||||||||||||||||| |||||||| |||||||| Sbjct: 328 tgctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgac 387 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 447 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 448 aaatactcctgggtgaccgatagcgaagta 477
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 743 bits (375), Expect = 0.0 Identities = 381/383 (99%) Strand = Plus / Plus Query: 68 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 127 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 128 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 188 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 248 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 308 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 367 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 300 Query: 368 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 360 Query: 428 cctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||| Sbjct: 361 cctgggtgaccgatagcgaagta 383
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 735 bits (371), Expect = 0.0 Identities = 432/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 106027 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 106085 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 106086 ggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 106144 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106145 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106204 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106205 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106264 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 106265 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggag 106324 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 || |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 106325 tgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 106384 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106385 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 106444 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||| |||||| Sbjct: 106445 aaatactcctgggtgaccgatagtgaagta 106474 Score = 686 bits (346), Expect = 0.0 Identities = 431/453 (95%), Gaps = 5/453 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 135882 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 135824 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 135823 ggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 135765 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135764 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135705 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135704 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135645 Query: 241 gtgaaaacggggttgtgggagagc-aatacaagcgttgtgctgctaggcgaagcggttga 299 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || || Sbjct: 135644 gtgaaaacggggttgtgggagagcaaatacaagcgtcgtgctgctaggcgaagcagtgga 135585 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg-ctctg 358 ||| |||||||||||||| | |||||||||||||||||||||||||||||| | | ||| Sbjct: 135584 gtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgcccctg 135525 Query: 359 acccgagtagcatggggcacgtggaatcccgtgtgaatcag-caaggaccaccttgcaag 417 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 135524 acccgagtagcatggggcacgtggaatcccgtgtgaatcagccaaggaccaccttgcaag 135465 Query: 418 gctaaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||| |||||| Sbjct: 135464 gctaaatactcctgggtgaccgatagtgaagta 135432
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 735 bits (371), Expect = 0.0 Identities = 432/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 136158 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 136100 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 136099 ggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 136041 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136040 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135981 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135980 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135921 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 135920 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggag 135861 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 || |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 135860 tgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 135801 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135800 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 135741 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||| |||||| Sbjct: 135740 aaatactcctgggtgaccgatagtgaagta 135711 Score = 735 bits (371), Expect = 0.0 Identities = 432/450 (96%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 106249 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 106307 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 106308 ggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 106366 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106367 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106426 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106427 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106486 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 106487 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggag 106546 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 || |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 106547 tgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 106606 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106607 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 106666 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||| |||||| Sbjct: 106667 aaatactcctgggtgaccgatagtgaagta 106696
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 729 bits (368), Expect = 0.0 Identities = 433/451 (96%), Gaps = 3/451 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 136278 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 136220 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 136219 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 136161 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136160 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 136101 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136100 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 136041 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 136040 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccga 135981 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135980 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 135921 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135920 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135861 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 135860 taaatactcctgggtgaccgatagcgaagta 135830 Score = 729 bits (368), Expect = 0.0 Identities = 433/451 (96%), Gaps = 3/451 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 106352 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 106410 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 106411 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 106469 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106470 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106529 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106530 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106589 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 106590 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccga 106649 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106650 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 106709 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106710 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 106769 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 106770 taaatactcctgggtgaccgatagcgaagta 106800
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 729 bits (368), Expect = 0.0 Identities = 433/451 (96%), Gaps = 3/451 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 136916 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 136858 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 136857 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 136799 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136798 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 136739 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136738 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 136679 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 136678 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 136619 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 136618 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 136559 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136558 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 136499 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 136498 taaatactcctgggtgaccgatagcgaagta 136468 Score = 729 bits (368), Expect = 0.0 Identities = 433/451 (96%), Gaps = 3/451 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 106641 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 106699 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 106700 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 106758 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106759 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106818 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106819 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106878 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 106879 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 106938 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 106939 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 106998 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106999 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 107058 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 107059 taaatactcctgggtgaccgatagcgaagta 107089
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 729 bits (368), Expect = 0.0 Identities = 433/451 (96%), Gaps = 3/451 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 1546 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 1604 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 1605 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 1663 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1664 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 1723 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1724 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 1783 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 1784 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccga 1843 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1844 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 1903 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1904 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 1963 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 1964 taaatactcctgggtgaccgatagcgaagta 1994
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 729 bits (368), Expect = 0.0 Identities = 433/451 (96%), Gaps = 3/451 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 135524 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 135466 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 135465 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 135407 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135406 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135347 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135346 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135287 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135286 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 135227 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 135226 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 135167 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135107 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 135106 taaatactcctgggtgaccgatagcgaagta 135076 Score = 729 bits (368), Expect = 0.0 Identities = 433/451 (96%), Gaps = 3/451 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 105512 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 105570 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 105571 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 105629 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105630 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 105689 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105690 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 105749 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105750 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 105809 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 105810 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 105869 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105870 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 105929 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 105930 taaatactcctgggtgaccgatagcgaagta 105960
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 729 bits (368), Expect = 0.0 Identities = 433/451 (96%), Gaps = 3/451 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 135659 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 135601 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 135600 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 135542 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135541 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135482 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135481 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135422 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135421 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 135362 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 135361 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 135302 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135301 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135242 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 135241 taaatactcctgggtgaccgatagcgaagta 135211 Score = 729 bits (368), Expect = 0.0 Identities = 433/451 (96%), Gaps = 3/451 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 105684 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 105742 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 105743 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 105801 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105802 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 105861 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105862 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 105921 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105922 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 105981 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 105982 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 106041 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106042 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 106101 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 106102 taaatactcctgggtgaccgatagcgaagta 106132
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 729 bits (368), Expect = 0.0 Identities = 433/451 (96%), Gaps = 3/451 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 135657 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 135599 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 135598 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 135540 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135539 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135480 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135479 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135420 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135419 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 135360 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 135359 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 135300 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135299 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135240 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 135239 taaatactcctgggtgaccgatagcgaagta 135209 Score = 729 bits (368), Expect = 0.0 Identities = 433/451 (96%), Gaps = 3/451 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 105681 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 105739 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 105740 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 105798 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105799 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 105858 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105859 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 105918 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105919 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 105978 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 105979 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 106038 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106039 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 106098 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 106099 taaatactcctgggtgaccgatagcgaagta 106129
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 729 bits (368), Expect = 0.0 Identities = 433/451 (96%), Gaps = 3/451 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 135569 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 135511 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 135510 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 135452 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135451 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135392 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135391 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135332 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135331 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 135272 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 135271 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 135212 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135211 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135152 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 135151 taaatactcctgggtgaccgatagcgaagta 135121 Score = 729 bits (368), Expect = 0.0 Identities = 433/451 (96%), Gaps = 3/451 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 105559 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 105617 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 105618 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 105676 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105677 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 105736 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105737 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 105796 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105797 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 105856 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 105857 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 105916 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105917 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 105976 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 105977 taaatactcctgggtgaccgatagcgaagta 106007
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 729 bits (368), Expect = 0.0 Identities = 433/451 (96%), Gaps = 3/451 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 136276 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 136218 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 136217 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 136159 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136158 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 136099 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136098 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 136039 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 136038 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccga 135979 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135978 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 135919 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135918 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135859 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 135858 taaatactcctgggtgaccgatagcgaagta 135828 Score = 729 bits (368), Expect = 0.0 Identities = 433/451 (96%), Gaps = 3/451 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 106350 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 106408 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 106409 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 106467 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106468 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106527 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106528 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106587 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 106588 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccga 106647 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106648 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 106707 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106708 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 106767 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 106768 taaatactcctgggtgaccgatagcgaagta 106798
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 729 bits (368), Expect = 0.0 Identities = 433/451 (96%), Gaps = 3/451 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 135536 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 135478 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 135477 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 135419 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135418 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135359 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135358 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135299 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135298 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 135239 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 135238 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 135179 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135178 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135119 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 135118 taaatactcctgggtgaccgatagcgaagta 135088 Score = 729 bits (368), Expect = 0.0 Identities = 433/451 (96%), Gaps = 3/451 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 105526 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 105584 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 105585 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 105643 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105644 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 105703 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105704 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 105763 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105764 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 105823 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 105824 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 105883 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105884 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 105943 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 105944 taaatactcctgggtgaccgatagcgaagta 105974
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 729 bits (368), Expect = 0.0 Identities = 433/451 (96%), Gaps = 3/451 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 22 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 80 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 81 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 139 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 140 gctgaatccatgggcaggcaagagacaacctaacgaactgaaacatcttagtagccagag 199 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagc-ggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 200 gaaaagaaagcaaaagcgattcccgtagtagcaggcgagcgaaatgggagcagcctaaac 259 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 299 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 260 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgaa 319 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 |||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 320 gtgccgaaccctagatggctagagtccagtagccgaaagcatcactagcttacgctctga 379 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 439 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||| |||||| Sbjct: 440 taaatactcctgggtgaccgatagtgaagta 470
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 728 bits (367), Expect = 0.0 Identities = 431/450 (95%), Gaps = 2/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 139482 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 139424 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 139423 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-t 139365 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 139364 gctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggag 139305 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139304 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 139245 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| || Sbjct: 139244 gtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaag 139185 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||| |||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 139184 tgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgac 139125 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139124 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 139065 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 139064 aaatactcctgggtgaccgatagcgaagta 139035 Score = 728 bits (367), Expect = 0.0 Identities = 431/450 (95%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 109615 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 109673 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 109674 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-t 109732 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 109733 gctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggag 109792 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109793 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 109852 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| || Sbjct: 109853 gtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaag 109912 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||| |||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 109913 tgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgac 109972 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109973 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 110032 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 110033 aaatactcctgggtgaccgatagcgaagta 110062
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 728 bits (367), Expect = 0.0 Identities = 431/450 (95%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 71 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 129 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 130 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-t 188 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 189 gctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggag 248 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 308 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| || Sbjct: 309 gtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaag 368 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||| |||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 369 tgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgac 428 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 488 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 489 aaatactcctgggtgaccgatagcgaagta 518
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 728 bits (367), Expect = 0.0 Identities = 373/375 (99%) Strand = Plus / Plus Query: 76 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 135 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 136 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 196 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 256 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 316 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 375 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 241 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 300 Query: 376 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 360 Query: 436 accgatagcgaagta 450 ||||||||||||||| Sbjct: 361 accgatagcgaagta 375
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 722 bits (364), Expect = 0.0 Identities = 432/451 (95%), Gaps = 3/451 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 136007 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 135949 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||| ||||||| |||||| |||||||| |||||| | Sbjct: 135948 ggagttgaaaataagcatagatccggggattcccgaatagggcaacctttcgaactgc-t 135890 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135889 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135830 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135829 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135770 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 135769 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccga 135710 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135709 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 135650 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135649 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135590 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 135589 taaatactcctgggtgaccgatagcgaagta 135559 Score = 722 bits (364), Expect = 0.0 Identities = 432/451 (95%), Gaps = 3/451 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 106131 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 106189 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||| ||||||| |||||| |||||||| |||||| | Sbjct: 106190 ggagttgaaaataagcatagatccggggattcccgaatagggcaacctttcgaactgc-t 106248 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106249 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106308 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106309 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106368 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 106369 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccga 106428 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106429 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 106488 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106489 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 106548 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 106549 taaatactcctgggtgaccgatagcgaagta 106579
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 720 bits (363), Expect = 0.0 Identities = 430/450 (95%), Gaps = 2/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||| Sbjct: 131769 ggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcgg 131711 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||| |||||||||||||||| ||||||||||||||| |||| | | Sbjct: 131710 ggagttgaaaataagcagagatccggagattcccgaataggtcaacctttcgaacttc-t 131652 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131651 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 131592 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131591 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 131532 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||| | || ||| Sbjct: 131531 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggag 131472 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131471 tgcggaaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 131412 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131411 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 131352 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 131351 aaatactcctgggtgaccgatagcgaagta 131322 Score = 720 bits (363), Expect = 0.0 Identities = 430/450 (95%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||| Sbjct: 101676 ggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcgg 101734 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||| |||||||||||||||| ||||||||||||||| |||| | | Sbjct: 101735 ggagttgaaaataagcagagatccggagattcccgaataggtcaacctttcgaacttc-t 101793 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101794 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 101853 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101854 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 101913 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||| | || ||| Sbjct: 101914 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggag 101973 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 101974 tgcggaaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 102033 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102034 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 102093 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 102094 aaatactcctgggtgaccgatagcgaagta 102123
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 714 bits (360), Expect = 0.0 Identities = 431/451 (95%), Gaps = 3/451 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 139691 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 139633 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 139632 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-t 139574 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139573 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 139514 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139513 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 139454 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 139453 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcga 139394 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| ||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 139393 atgctgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctga 139334 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139333 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 139274 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||| ||||||||||| Sbjct: 139273 taaatactcctgggtgacccatagcgaagta 139243 Score = 714 bits (360), Expect = 0.0 Identities = 431/451 (95%), Gaps = 3/451 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 109608 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 109666 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 109667 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-t 109725 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109726 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 109785 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109786 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 109845 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 109846 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcga 109905 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| ||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 109906 atgctgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctga 109965 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109966 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 110025 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||| ||||||||||| Sbjct: 110026 taaatactcctgggtgacccatagcgaagta 110056
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 712 bits (359), Expect = 0.0 Identities = 368/371 (99%) Strand = Plus / Plus Query: 80 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 139 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 140 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 200 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 260 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240 Query: 320 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 379 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 241 aaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacg 300 Query: 380 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 360 Query: 440 atagcgaagta 450 ||||||||||| Sbjct: 361 atagcgaagta 371
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 710 bits (358), Expect = 0.0 Identities = 364/366 (99%) Strand = Plus / Plus Query: 77 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 136 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 137 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 197 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 257 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 317 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 376 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 300 Query: 377 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 360 Query: 437 ccgata 442 |||||| Sbjct: 361 ccgata 366
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 708 bits (357), Expect = 0.0 Identities = 427/447 (95%), Gaps = 4/447 (0%) Strand = Plus / Plus Query: 4 ggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgggga 63 |||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||| Sbjct: 22 ggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgggga 80 Query: 64 gttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 123 ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||| Sbjct: 81 gttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgct 139 Query: 124 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 183 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 gaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 199 Query: 184 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 259 Query: 244 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 303 |||||||||||||||||||||||||||||||| |||||||||||||||||||| || | | Sbjct: 260 aaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggaatac 319 Query: 304 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 363 |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 320 tgcaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccg 379 Query: 364 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 439 Query: 424 tactcctgggtgaccgatagcgaagta 450 |||| | |||||||||||| |||||| Sbjct: 440 tactac--ggtgaccgatagtgaagta 464
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 708 bits (357), Expect = 0.0 Identities = 427/448 (95%), Gaps = 2/448 (0%) Strand = Plus / Plus Query: 3 tggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgggg 62 ||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||| Sbjct: 1 tggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgggg 59 Query: 63 agttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgc 122 |||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||| Sbjct: 60 agttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgc 118 Query: 123 tgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagga 182 ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119 cgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagagga 178 Query: 183 aaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 aaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 238 Query: 243 gaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtg 302 ||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 239 gaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggccgaaca 298 Query: 303 ccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc 362 ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 299 ccgcaccctagatggtgggagtccagtagccgaaagcatcactagcttacgctctgaccc 358 Query: 363 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 418 Query: 423 atactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||| Sbjct: 419 atactcctgggtgaccgatagcgaagta 446
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 704 bits (355), Expect = 0.0 Identities = 428/450 (95%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 81 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| ||||||||||||||||||||||||||||| ||| ||| |||||||| |||||| | Sbjct: 82 ggagctgaaaataagcatagatccggagattcccgaatgggttaaccttttgaactgc-t 140 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 200 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 201 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 260 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||| Sbjct: 261 gtgaaaacggggttgtgggagagcaatataagtgttgtgttgctaggcgaagcggttgag 320 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | |||||||| |||||| | |||||||||||||||||||||||||||||| ||||| || Sbjct: 321 tcccgcaccccagatggtgagagtccagtagccgaaagcatcactagcttacgctctaac 380 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 440 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 441 aaatactcctgggtgaccgatagcgaagta 470
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 704 bits (355), Expect = 0.0 Identities = 428/450 (95%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 4522 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 4580 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 4581 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 4639 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4640 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 4699 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4700 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 4759 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 4760 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaa 4819 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4820 tgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 4879 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4880 ccgagtaacatggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggct 4939 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||| |||||| Sbjct: 4940 aaatactcctgggtgaccgatagtgaagta 4969
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 704 bits (355), Expect = 0.0 Identities = 428/450 (95%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 4522 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 4580 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 4581 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 4639 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4640 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 4699 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4700 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 4759 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 4760 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaa 4819 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4820 tgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 4879 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4880 ccgagtaacatggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggct 4939 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||| |||||| Sbjct: 4940 aaatactcctgggtgaccgatagtgaagta 4969
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 698 bits (352), Expect = 0.0 Identities = 427/447 (95%), Gaps = 4/447 (0%) Strand = Plus / Plus Query: 5 gatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 64 ||||||||||||||||| | |||||||||||||||| || |||||||||||||||||||| Sbjct: 1 gatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggag 59 Query: 65 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 124 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 60 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 118 Query: 125 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 184 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 178 Query: 185 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 238 Query: 245 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgc 303 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 239 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 298 Query: 304 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 363 |||||| | ||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 299 tgcaccc-atatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 357 Query: 364 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 417 Query: 424 tactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||| Sbjct: 418 tactcctgggtgaccgatagcgaagta 444
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 696 bits (351), Expect = 0.0 Identities = 378/386 (97%), Gaps = 1/386 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | | |||||||||||||||||||||||||||||||||| Sbjct: 123448 ggtggatacctaggtacccagag-atgaggaagggcgtagcaagcgacgaaatgcttcgg 123390 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123389 ggagttgaaattaagcatagatccggagattcccaaataggtcaaccttttgaactgcct 123330 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123329 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 123270 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123269 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 123210 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123209 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 123150 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 123149 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgcc 123090 Query: 361 ccgagtagcatggggcacgtggaatc 386 |||||||||||||||||||||||||| Sbjct: 123089 ccgagtagcatggggcacgtggaatc 123064 Score = 145 bits (73), Expect = 1e-31 Identities = 73/73 (100%) Strand = Plus / Minus Query: 378 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 438 cgatagcgaagta 450 ||||||||||||| Sbjct: 122760 cgatagcgaagta 122748
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 696 bits (351), Expect = 0.0 Identities = 427/450 (94%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 4253 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 4311 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 4312 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 4370 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4371 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 4430 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4431 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaacc 4490 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | || Sbjct: 4491 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaa 4550 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4551 tgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 4610 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4611 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 4670 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||| |||||| Sbjct: 4671 aaatactcctgggtgaccgatagtgaagta 4700
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 696 bits (351), Expect = 0.0 Identities = 378/386 (97%), Gaps = 1/386 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | | |||||||||||||||||||||||||||||||||| Sbjct: 12825989 ggtggatacctaggtacccagag-atgaggaagggcgtagcaagcgacgaaatgcttcgg 12825931 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 12825930 ggagttgaaattaagcatagatccggagattcccaaataggtcaaccttttgaactgcct 12825871 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825870 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 12825811 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825810 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 12825751 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825750 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 12825691 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 12825690 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgcc 12825631 Query: 361 ccgagtagcatggggcacgtggaatc 386 |||||||||||||||||||||||||| Sbjct: 12825630 ccgagtagcatggggcacgtggaatc 12825605 Score = 145 bits (73), Expect = 1e-31 Identities = 73/73 (100%) Strand = Plus / Minus Query: 378 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 438 cgatagcgaagta 450 ||||||||||||| Sbjct: 12825301 cgatagcgaagta 12825289 Score = 87.7 bits (44), Expect = 3e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 323 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 382 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 696 bits (351), Expect = 0.0 Identities = 427/450 (94%), Gaps = 2/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 23672 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 23614 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 23613 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 23555 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23554 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 23495 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 23494 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaacc 23435 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | || Sbjct: 23434 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaa 23375 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 23374 tgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 23315 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23314 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 23255 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||| |||||| Sbjct: 23254 aaatactcctgggtgaccgatagtgaagta 23225
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 696 bits (351), Expect = 0.0 Identities = 427/450 (94%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcgg 88 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| |||||||||||||||| |||||| |||||||| |||| | | Sbjct: 89 ggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-t 147 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 207 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||| | || ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggag 327 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| | ||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 328 tgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgac 387 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 447 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 448 aaatactcctgggtgaccgatagcgaagta 477
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 696 bits (351), Expect = 0.0 Identities = 427/450 (94%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcgg 88 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| |||||||||||||||| |||||| |||||||| |||| | | Sbjct: 89 ggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-t 147 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 207 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||| | || ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggag 327 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| | ||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 328 tgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgac 387 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 447 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 448 aaatactcctgggtgaccgatagcgaagta 477
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 684 bits (345), Expect = 0.0 Identities = 421/444 (94%), Gaps = 2/444 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||| Sbjct: 518 ggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcgg 576 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| |||||||||||||||| |||||| |||||||| |||| | | Sbjct: 577 ggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-t 635 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 636 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 695 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 696 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 755 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||| | || ||| Sbjct: 756 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggag 815 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| | ||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 816 tgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgac 875 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 876 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 935 Query: 421 aaatactcctgggtgaccgatagc 444 |||||||||||||||||||||||| Sbjct: 936 aaatactcctgggtgaccgatagc 959
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 684 bits (345), Expect = 0.0 Identities = 430/452 (95%), Gaps = 5/452 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 122 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 180 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 181 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 239 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt-agccaga 179 |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 240 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtgagccaga 299 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 359 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag-cggttg 298 |||||||||||| ||||||||||||||||||||||| |||||||||||||||| || | Sbjct: 360 cgtgaaaacggg-ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagacgcccg 418 Query: 299 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 358 | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 419 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctg 478 Query: 359 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 418 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 479 acccgagtagcatggggcacgtggaatcccgtgtgaatcgacaaggaccaccttgcaagg 538 Query: 419 ctaaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||||| Sbjct: 539 ctaaatactcctgggtgaccgatagcgaagta 570
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 682 bits (344), Expect = 0.0 Identities = 424/447 (94%), Gaps = 3/447 (0%) Strand = Plus / Minus Query: 5 gatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 64 ||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||| Sbjct: 142853 gatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggag 142795 Query: 65 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 124 |||||||||||| |||||||||||||||| ||| ||||||||||| |||||| ||||| Sbjct: 142794 ttgaaaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctg 142736 Query: 125 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 184 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142735 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 142676 Query: 185 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142675 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 142616 Query: 245 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgc 303 ||||||||||||||||||| |||||||||| ||||||||||||||||| | | |||||| Sbjct: 142615 aaacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgc 142556 Query: 304 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 363 ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 142555 tgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccg 142496 Query: 364 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 423 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 142495 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaa 142436 Query: 424 tactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||| Sbjct: 142435 tactcctgggtgaccgatagcgaagta 142409 Score = 682 bits (344), Expect = 0.0 Identities = 424/447 (94%), Gaps = 3/447 (0%) Strand = Plus / Plus Query: 5 gatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 64 ||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||| Sbjct: 110475 gatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggag 110533 Query: 65 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 124 |||||||||||| |||||||||||||||| ||| ||||||||||| |||||| ||||| Sbjct: 110534 ttgaaaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctg 110592 Query: 125 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 184 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110593 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 110652 Query: 185 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110653 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 110712 Query: 245 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgc 303 ||||||||||||||||||| |||||||||| ||||||||||||||||| | | |||||| Sbjct: 110713 aaacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgc 110772 Query: 304 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 363 ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 110773 tgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccg 110832 Query: 364 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 423 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 110833 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaa 110892 Query: 424 tactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||| Sbjct: 110893 tactcctgggtgaccgatagcgaagta 110919
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 670 bits (338), Expect = 0.0 Identities = 430/453 (94%), Gaps = 6/453 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || | |||||||||||||| Sbjct: 1789 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatc-acgaaatgcttcgg 1846 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 1847 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 1905 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1906 gctgaatccatgggcaggcaagagacaacctggcgaactgaaccatcttagtagccagag 1965 Query: 181 gaaaagaaagcaaaag-cgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1966 gaaaagaaagcaaaaggcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 2025 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagc-gttgtgctgctaggcgaagc-ggtt 297 |||||||||||||||||||||||||||||||||| | ||||||||||||||||| | Sbjct: 2026 cgtgaaaacggggttgtgggagagcaatacaagcggccgtgctgctaggcgaagcagccc 2085 Query: 298 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 357 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2086 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 2145 Query: 358 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2146 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 2205 Query: 418 gctaaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||||| Sbjct: 2206 gctaaatactcctgggtgaccgatagcgaagta 2238
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 664 bits (335), Expect = 0.0 Identities = 427/453 (94%), Gaps = 5/453 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 131849 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 131791 Query: 61 ggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcc 119 |||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 131790 ggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc- 131732 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 131731 tgctgaatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccaga 131672 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131671 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 131612 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 299 ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | || Sbjct: 131611 cgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcaga 131552 Query: 300 g--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 357 | ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 131551 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 131492 Query: 358 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131491 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 131432 Query: 418 gctaaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||| |||||| Sbjct: 131431 gctaaatactcctgggtgaccgatagtgaagta 131399 Score = 664 bits (335), Expect = 0.0 Identities = 427/453 (94%), Gaps = 5/453 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 103545 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 103603 Query: 61 ggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcc 119 |||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 103604 ggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc- 103662 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 103663 tgctgaatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccaga 103722 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103723 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 103782 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 299 ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | || Sbjct: 103783 cgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcaga 103842 Query: 300 g--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 357 | ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 103843 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 103902 Query: 358 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103903 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 103962 Query: 418 gctaaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||| |||||| Sbjct: 103963 gctaaatactcctgggtgaccgatagtgaagta 103995
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 662 bits (334), Expect = 0.0 Identities = 425/452 (94%), Gaps = 4/452 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||| | ||||||||||||||||||| Sbjct: 86284 ggtggatacctaggcacccagag-acgaggaagggcgtggtaagcgacgaaatgcttcgg 86342 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||| ||||||||||||||||||||| ||||||| |||| ||| |||||| | Sbjct: 86343 ggagttgaaaatgagcatagatccggagattcccgaataggttaacccttttaactgc-t 86401 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86402 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 86461 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 86462 gaatagaaagcaaaagcgattcccgtagtagtggcgagcgaaatgggagcagcctaaacc 86521 Query: 241 gtgaaaacggggttgtgggagagc--aatacaagcgttgtgctgctaggcgaagcggttg 298 |||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||| Sbjct: 86522 gtgaaaacggggttgtgggagagcccaatataagctctgtgctgctaggcgaagcggttg 86581 Query: 299 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 358 ||| | ||||||||||||| | |||||||||||||||||||||| | ||||| ||||| Sbjct: 86582 agtcctgcaccctagatggtgagagtccagtagccgaaagcatcattggcttacgctcta 86641 Query: 359 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86642 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 86701 Query: 419 ctaaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||||| Sbjct: 86702 ctaaatactcctgggtgaccgatagcgaagta 86733
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 662 bits (334), Expect = 0.0 Identities = 337/338 (99%) Strand = Plus / Plus Query: 113 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 173 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 233 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 293 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 352 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 353 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 413 gcaaggctaaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagta 338
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 662 bits (334), Expect = 0.0 Identities = 425/452 (94%), Gaps = 4/452 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||| | ||||||||||||||||||| Sbjct: 88370 ggtggatacctaggcacccagag-acgaggaagggcgtggtaagcgacgaaatgcttcgg 88428 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||| ||||||||||||||||||||| ||||||| |||||||| ||||| | Sbjct: 88429 ggagttgaaaattagcatagatccggagattcccgaataggttaacctttttcactgc-t 88487 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 88488 gctgaatccatgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagag 88547 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88548 gaatagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 88607 Query: 241 gtgaaaacggggttgtgggagagca--atacaagcgttgtgctgctaggcgaagcggttg 298 ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||| Sbjct: 88608 gtgaaaacggggttgtgggagagcacaatataagctctgtgctgctaggcgaagcggttg 88667 Query: 299 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 358 ||| | ||||||||||||| | |||||||||||||||||||||| | ||||| ||||| Sbjct: 88668 agtcctgcaccctagatggtgagagtccagtagccgaaagcatcattggcttacgctcta 88727 Query: 359 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88728 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 88787 Query: 419 ctaaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||||| Sbjct: 88788 ctaaatactcctgggtgaccgatagcgaagta 88819
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 636 bits (321), Expect = e-179 Identities = 416/444 (93%), Gaps = 3/444 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||| |||| || |||||||||||||||| Sbjct: 52664 ggtggatacctaggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcgg 52606 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| | Sbjct: 52605 ggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-t 52547 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 52546 gctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccagag 52487 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 52486 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaacc 52427 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttga 299 | |||||||||||||||||||||||||| ||| || ||||||||||||||| | | |||| Sbjct: 52426 gcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttga 52367 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||| |||||| |||||||| Sbjct: 52366 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctga 52307 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52306 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 52247 Query: 420 taaatactcctgggtgaccgatag 443 ||||||||||||||| |||||||| Sbjct: 52246 taaatactcctgggtaaccgatag 52223 Score = 636 bits (321), Expect = e-179 Identities = 416/444 (93%), Gaps = 3/444 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||| |||| || |||||||||||||||| Sbjct: 37164 ggtggatacctaggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcgg 37222 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| | Sbjct: 37223 ggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-t 37281 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 37282 gctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccagag 37341 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 37342 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaacc 37401 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttga 299 | |||||||||||||||||||||||||| ||| || ||||||||||||||| | | |||| Sbjct: 37402 gcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttga 37461 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||| |||||| |||||||| Sbjct: 37462 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctga 37521 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37522 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 37581 Query: 420 taaatactcctgggtgaccgatag 443 ||||||||||||||| |||||||| Sbjct: 37582 taaatactcctgggtaaccgatag 37605
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 636 bits (321), Expect = e-179 Identities = 416/444 (93%), Gaps = 3/444 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||| |||| || |||||||||||||||| Sbjct: 4092 ggtggatacctaggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcgg 4150 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| | Sbjct: 4151 ggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-t 4209 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 4210 gctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccagag 4269 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4270 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaacc 4329 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttga 299 | |||||||||||||||||||||||||| ||| || ||||||||||||||| | | |||| Sbjct: 4330 gcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttga 4389 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||| |||||| |||||||| Sbjct: 4390 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctga 4449 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4450 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 4509 Query: 420 taaatactcctgggtgaccgatag 443 ||||||||||||||| |||||||| Sbjct: 4510 taaatactcctgggtaaccgatag 4533
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 634 bits (320), Expect = e-179 Identities = 422/454 (92%), Gaps = 8/454 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||| ||| | ||||||||||||||||||| |||||||||||||||| Sbjct: 128424 ggtggatacctaggcactcagag-acgaggaagggcgtagcaatcgacgaaatgcttcgg 128366 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 128365 ggagctgaaaacaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 128307 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128306 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 128247 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||| ||||||||| ||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 128246 gaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaacc 128187 Query: 241 gtgaaaacggggttgtgggagagc------aatacaagcgttgtgctgctaggcgaagcg 294 ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 128186 gtgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagcg 128127 Query: 295 gttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgc 354 ||||||| |||||||||||||||| | |||||||||||||||||||||||||||| | || Sbjct: 128126 gttgagtcccgcaccctagatggcaagagtccagtagccgaaagcatcactagctcacgc 128067 Query: 355 tctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgc 414 ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128066 tctaacccaagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgc 128007 Query: 415 aaggctaaatactcctgggtgaccgatagcgaag 448 |||||||||||||||||||||||||||||||||| Sbjct: 128006 aaggctaaatactcctgggtgaccgatagcgaag 127973 Score = 634 bits (320), Expect = e-179 Identities = 422/454 (92%), Gaps = 8/454 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||| ||| | ||||||||||||||||||| |||||||||||||||| Sbjct: 95023 ggtggatacctaggcactcagag-acgaggaagggcgtagcaatcgacgaaatgcttcgg 95081 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 95082 ggagctgaaaacaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 95140 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95141 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95200 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||| ||||||||| ||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 95201 gaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaacc 95260 Query: 241 gtgaaaacggggttgtgggagagc------aatacaagcgttgtgctgctaggcgaagcg 294 ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 95261 gtgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagcg 95320 Query: 295 gttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgc 354 ||||||| |||||||||||||||| | |||||||||||||||||||||||||||| | || Sbjct: 95321 gttgagtcccgcaccctagatggcaagagtccagtagccgaaagcatcactagctcacgc 95380 Query: 355 tctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgc 414 ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95381 tctaacccaagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgc 95440 Query: 415 aaggctaaatactcctgggtgaccgatagcgaag 448 |||||||||||||||||||||||||||||||||| Sbjct: 95441 aaggctaaatactcctgggtgaccgatagcgaag 95474
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 624 bits (315), Expect = e-176 Identities = 419/450 (93%), Gaps = 3/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 116187 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 116129 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| |||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 116128 ggagctgaaaataagtatagatccggagattcccgaataggttaacctttgaaactgc-t 116070 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 116069 gctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagag 116010 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 116009 gaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaacc 115950 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||| ||||||| |||| | | ||| |||||| ||||||||||||| |||||| Sbjct: 115949 gtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgag 115891 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | ||||||||||||| ||||||||||| ||||||||| |||||||||| ||||| || Sbjct: 115890 tcctgcaccctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaac 115831 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 115830 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggct 115771 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 115770 aaatactcctgggtgaccgatagcgaagta 115741 Score = 624 bits (315), Expect = e-176 Identities = 419/450 (93%), Gaps = 3/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 85933 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 85991 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| |||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 85992 ggagctgaaaataagtatagatccggagattcccgaataggttaacctttgaaactgc-t 86050 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 86051 gctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagag 86110 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 86111 gaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaacc 86170 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||| ||||||| |||| | | ||| |||||| ||||||||||||| |||||| Sbjct: 86171 gtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgag 86229 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | ||||||||||||| ||||||||||| ||||||||| |||||||||| ||||| || Sbjct: 86230 tcctgcaccctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaac 86289 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 86290 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggct 86349 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 86350 aaatactcctgggtgaccgatagcgaagta 86379
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 624 bits (315), Expect = e-176 Identities = 418/450 (92%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 3912 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 3970 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 3971 ggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 4029 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || || | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 4030 gctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagag 4089 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4090 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 4149 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| Sbjct: 4150 gtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgag 4209 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | |||||| |||||| | ||||||||||||||||||| |||| |||| || | || Sbjct: 4210 ttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaac 4269 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4270 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 4329 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 4330 aaatactcctgggtgaccgatagcgaagta 4359
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 624 bits (315), Expect = e-176 Identities = 418/450 (92%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 22 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 80 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 81 ggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 139 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || || | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 140 gctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagag 199 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 200 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 259 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| Sbjct: 260 gtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgag 319 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | |||||| |||||| | ||||||||||||||||||| |||| |||| || | || Sbjct: 320 ttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaac 379 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 439 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 440 aaatactcctgggtgaccgatagcgaagta 469
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 624 bits (315), Expect = e-176 Identities = 418/450 (92%), Gaps = 2/450 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 151223 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 151165 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 151164 ggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 151106 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || || | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 151105 gctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagag 151046 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 151045 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 150986 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| Sbjct: 150985 gtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgag 150926 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | |||||| |||||| | ||||||||||||||||||| |||| |||| || | || Sbjct: 150925 ttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaac 150866 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150865 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 150806 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 150805 aaatactcctgggtgaccgatagcgaagta 150776 Score = 624 bits (315), Expect = e-176 Identities = 418/450 (92%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 117443 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 117501 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 117502 ggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 117560 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || || | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 117561 gctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagag 117620 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 117621 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 117680 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| Sbjct: 117681 gtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgag 117740 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | |||||| |||||| | ||||||||||||||||||| |||| |||| || | || Sbjct: 117741 ttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaac 117800 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117801 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 117860 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 117861 aaatactcctgggtgaccgatagcgaagta 117890
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 624 bits (315), Expect = e-176 Identities = 418/450 (92%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 22 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 80 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 81 ggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 139 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || || | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 140 gctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagag 199 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 200 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 259 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| Sbjct: 260 gtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgag 319 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | |||||| |||||| | ||||||||||||||||||| |||| |||| || | || Sbjct: 320 ttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaac 379 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 439 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 440 aaatactcctgggtgaccgatagcgaagta 469
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 618 bits (312), Expect = e-174 Identities = 419/451 (92%), Gaps = 3/451 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 2066 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 2124 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 2125 ggagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-t 2183 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2184 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 2243 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 2244 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaacc 2303 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||| | ||| ||||| ||||||||||||| |||||| Sbjct: 2304 gtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgag 2363 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctga 359 | | ||||||||||||| | |||||||||||||||||||| || | || ||||||| | Sbjct: 2364 tcctgcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaa 2423 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2424 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggc 2483 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||| |||||| Sbjct: 2484 taaatactcctgggtgaccgatagtgaagta 2514
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 618 bits (312), Expect = e-174 Identities = 419/451 (92%), Gaps = 3/451 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 118127 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 118069 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 118068 ggagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-t 118010 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118009 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 117950 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 117949 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaacc 117890 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||| | ||| ||||| ||||||||||||| |||||| Sbjct: 117889 gtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgag 117830 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctga 359 | | ||||||||||||| | |||||||||||||||||||| || | || ||||||| | Sbjct: 117829 tcctgcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaa 117770 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 117769 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggc 117710 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||| |||||| Sbjct: 117709 taaatactcctgggtgaccgatagtgaagta 117679 Score = 618 bits (312), Expect = e-174 Identities = 419/451 (92%), Gaps = 3/451 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 89975 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 90033 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 90034 ggagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-t 90092 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90093 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 90152 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 90153 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaacc 90212 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||| | ||| ||||| ||||||||||||| |||||| Sbjct: 90213 gtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgag 90272 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctga 359 | | ||||||||||||| | |||||||||||||||||||| || | || ||||||| | Sbjct: 90273 tcctgcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaa 90332 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 90333 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggc 90392 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||| |||||| Sbjct: 90393 taaatactcctgggtgaccgatagtgaagta 90423
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 617 bits (311), Expect = e-173 Identities = 417/450 (92%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgg 81 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| ||||||||||||| ||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 82 ggagctgaaaataagcatggatccggagattcccgaataggttaaccttttgaactgc-t 140 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 gctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagag 200 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 201 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagtagcctaaacc 260 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||| |||||| | |||||||| |||||||||||| ||||| Sbjct: 261 gtgaaaacggggttgtgggggagcaaagtaggcgttgtgtcgctaggcgaagcagttgaa 320 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | ||||| ||||||| | |||||||||||||||||||||||||| ||||||||| || Sbjct: 321 tcctgcaccatagatggtgagagtccagtagccgaaagcatcactagtttatgctctaac 380 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 381 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggct 440 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 441 aaatactcctgggtgaccgatagcgaagta 470
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 613 bits (309), Expect = e-172 Identities = 424/451 (94%), Gaps = 15/451 (3%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 711 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 653 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||||| ||| |||| || Sbjct: 652 ggagttgaaaataagcgtagatccggagattcccgaataggtca--ctt---gactg-ct 599 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||||||||||||| || |||| ||| |||||||||||||||||| Sbjct: 598 gctgaatccatg-gcaggcaagagaca--ct-gcga--tga-acatcttagtagccagag 546 Query: 181 gaaaagaaa-gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 gaaaagaaaggcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 486 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 299 ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| || Sbjct: 485 cgtgaaaacggggttgtgggagagcgatacaagcgtcgtgctgctaggcgaagcggtgga 426 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 |||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 425 gtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 366 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 306 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 305 taaatactcctgggtgaccgatagcgaagta 275
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 611 bits (308), Expect = e-172 Identities = 418/451 (92%), Gaps = 3/451 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 146537 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 146479 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| |||| | | Sbjct: 146478 ggagctgaaaatgagcatggatccggagattcccgaataggttaaccttttgaactac-t 146420 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 146419 gctgaattcataggcaggcgagagacaacctggcgaactgaaacatcttagtagccagag 146360 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 146359 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 146300 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||| Sbjct: 146299 gtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgag 146240 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctga 359 | | | ||||||||||| | |||||||||||||||||||||||| || |||||||| | Sbjct: 146239 tcctgtaccctagatggtgagagtccagtagccgaaagcatcactggctttatgctccaa 146180 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 146179 cccgagtagcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggc 146120 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||| ||||| Sbjct: 146119 taaatactcctgggtgaccgatagcaaagta 146089 Score = 611 bits (308), Expect = e-172 Identities = 418/451 (92%), Gaps = 3/451 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 111925 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 111983 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| |||| | | Sbjct: 111984 ggagctgaaaatgagcatggatccggagattcccgaataggttaaccttttgaactac-t 112042 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 112043 gctgaattcataggcaggcgagagacaacctggcgaactgaaacatcttagtagccagag 112102 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 112103 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 112162 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||| Sbjct: 112163 gtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgag 112222 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctga 359 | | | ||||||||||| | |||||||||||||||||||||||| || |||||||| | Sbjct: 112223 tcctgtaccctagatggtgagagtccagtagccgaaagcatcactggctttatgctccaa 112282 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 112283 cccgagtagcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggc 112342 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||| ||||| Sbjct: 112343 taaatactcctgggtgaccgatagcaaagta 112373
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 609 bits (307), Expect = e-171 Identities = 416/450 (92%), Gaps = 2/450 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 6 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 64 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| |||||||||| |||||||||||||||||| ||||||| ||||||||||||||| | Sbjct: 65 ggagctgaaaataagtatagatccggagattcccgaataggttaaccttttaaactgc-t 123 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 124 gctgaatccataggcgggcaagagacaacctggcgaactgaaacatcttagtagccggag 183 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 184 gaagagaaagcaaaagcgattctcgtagtagcggcgagcgaaacgggagcagcctaaacc 243 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||| |||| | | |||| |||| ||||||||||||| |||||| Sbjct: 244 gtgaaaacggggttgtgggggagctaaagaagcattgtattgctaggcgaagcagttgag 303 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | ||||||||||||| | ||||||||| |||||||||| || ||||| ||||| || Sbjct: 304 tcctgcaccctagatggtgagagtccagtaaccgaaagcattacaagcttgggctctaac 363 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 ccgagtaacatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 423 Query: 421 aaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||| Sbjct: 424 aaatactcctgggtgaccgatagcgaagta 453
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 599 bits (302), Expect = e-168 Identities = 418/454 (92%), Gaps = 6/454 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 81 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| |||||||||| || ||||||||||||||| ||||||| ||||||||||||||| | Sbjct: 82 ggagctgaaaataagtatggatccggagattcccgaataggttaaccttttaaactgc-t 140 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| || |||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 141 gctgaattcataggcgggcaagagacaacccggcgaactgaaacatcttagtagccggag 200 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 201 gaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggagcggcctaaacc 260 Query: 241 gtgaaaacggggttgtgggagagcaatacaa----gcgttgtgctgctaggcgaagcggt 296 ||||||||||||||||||| |||| |||||| || ||| ||||||||||||||| || Sbjct: 261 gtgaaaacggggttgtgggggagctatacaaataagcattgcgctgctaggcgaagcagt 320 Query: 297 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 356 ||||| | |||||| |||||| | ||||||||| |||||||||| || | ||||||||| Sbjct: 321 tgagtcctgcaccccagatggtgagagtccagtaaccgaaagcataacaatcttatgctc 380 Query: 357 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 416 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 taacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 440 Query: 417 ggctaaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||||||| Sbjct: 441 ggctaaatactcctgggtgaccgatagcgaagta 474
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 595 bits (300), Expect = e-167 Identities = 353/368 (95%), Gaps = 2/368 (0%) Strand = Plus / Minus Query: 84 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 143 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 144 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 204 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 264 caatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaa 322 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 323 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 214 Query: 383 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 442 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 213 aatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgata 154 Query: 443 gcgaagta 450 |||||||| Sbjct: 153 gcgaagta 146
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 581 bits (293), Expect = e-163 Identities = 324/333 (97%), Gaps = 1/333 (0%) Strand = Plus / Plus Query: 119 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 178 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 179 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 239 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggtt 297 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 298 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 357 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 358 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 418 gctaaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagta 349
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 104 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 163 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 164 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 224 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 283 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 284 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 343 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 344 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 403 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 404 gaccaccttgcaaggctaaatactcctgggtg 435 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 549 bits (277), Expect = e-153 Identities = 405/444 (91%), Gaps = 3/444 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | ||||||||||| |||| || |||||||||||||||| Sbjct: 22 ggtggatacctaggcacccagag-acgaggaagggtgtagtaatcgacgaaatgcttcgg 80 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||| |||||||| ||| || ||||||| | ||||| | Sbjct: 81 ggagttgaaaataagcatagatccgtagattcccgaatggggtaacctttcacactgc-t 139 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 gctcaatccatgggcaggaaagagacaacctggcgaactgaaacatcttagtagccagag 199 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 200 gaaaataaagcaaaagcgattcccatagtagcggcgagcgaaatgggatcagcctaaacc 259 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 | |||||||||||||||||||||||||| |||||| ||||||||||||||||| | || | Sbjct: 260 gcgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcagcttaa 319 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 || |||||||||||||| |||||||||||| | |||||||||||| || ||||||| Sbjct: 320 atgatgcaccctagatggcgaaagtccagtagtcaaaagcatcactacgttgcgctctga 379 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 380 cccgagtagcatgggacacgtgtaatcccgtgtgaatcagcaaggaccaccttgcaaggc 439 Query: 420 taaatactcctgggtgaccgatag 443 ||||||||||||||| ||| |||| Sbjct: 440 taaatactcctgggtaaccaatag 463
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 545 bits (275), Expect = e-152 Identities = 377/405 (93%), Gaps = 6/405 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 2621 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 2679 Query: 61 ggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcc 119 |||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 2680 ggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc- 2738 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 ||||||||||| | |||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 2739 tgctgaatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccaga 2798 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2799 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 2858 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 299 ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | || Sbjct: 2859 cgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcaga 2918 Query: 300 g--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 357 | ||| |||||||||||||| | |||||||||||||||||||||||| ||||| ||||| Sbjct: 2919 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctct 2977 Query: 358 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 402 |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2978 gacccgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 545 bits (275), Expect = e-152 Identities = 377/405 (93%), Gaps = 6/405 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 876 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 934 Query: 61 ggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcc 119 |||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 935 ggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc- 993 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 ||||||||||| | |||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 994 tgctgaatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccaga 1053 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1054 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 1113 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 299 ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | || Sbjct: 1114 cgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcaga 1173 Query: 300 g--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 357 | ||| |||||||||||||| | |||||||||||||||||||||||| ||||| ||||| Sbjct: 1174 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctct 1232 Query: 358 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 402 |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1233 gacccgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 1277
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 517 bits (261), Expect = e-144 Identities = 264/265 (99%) Strand = Plus / Plus Query: 186 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 246 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 306 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 365 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 366 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 426 ctcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagta 265
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 513 bits (259), Expect = e-142 Identities = 262/263 (99%) Strand = Plus / Plus Query: 188 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 248 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 308 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 367 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 368 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 428 cctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagta 263
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 513 bits (259), Expect = e-142 Identities = 262/263 (99%) Strand = Plus / Plus Query: 188 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 248 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 308 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 367 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 368 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 428 cctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagta 263
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 511 bits (258), Expect = e-142 Identities = 261/262 (99%) Strand = Plus / Plus Query: 189 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 249 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 309 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 368 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 369 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 429 ctgggtgaccgatagcgaagta 450 |||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagta 262
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 511 bits (258), Expect = e-142 Identities = 261/262 (99%) Strand = Plus / Plus Query: 189 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 249 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 309 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 368 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 369 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 429 ctgggtgaccgatagcgaagta 450 |||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagta 265
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 507 bits (256), Expect = e-141 Identities = 259/260 (99%) Strand = Plus / Plus Query: 191 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 251 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 311 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 370 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 371 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 431 gggtgaccgatagcgaagta 450 |||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagta 260
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 507 bits (256), Expect = e-141 Identities = 271/275 (98%), Gaps = 1/275 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 20 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 78 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 138 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgt 275 ||||||||||||||||||||||||||||||||||| Sbjct: 259 gtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 507 bits (256), Expect = e-141 Identities = 271/275 (98%), Gaps = 1/275 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 20 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 78 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 138 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgt 275 ||||||||||||||||||||||||||||||||||| Sbjct: 259 gtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 482 bits (243), Expect = e-133 Identities = 335/362 (92%), Gaps = 3/362 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | | |||||||||||||| || |||||||||||||||| Sbjct: 177053 ggtggatacctaggcacccagag-aggaggaagggcgtagtaatcgacgaaatgcttcgg 177111 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||| ||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 177112 ggagttgaaaatcagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 177170 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||||||||||| |||| |||||||||||| |||||||||||||||| Sbjct: 177171 gctgaatccatgggcaggcaagagagaaccaggcgaactgaaagatcttagtagccagag 177230 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 177231 gaaaagaaagcaaaagcgattcccgtagtagcggcgggcgaaatgggagctgcctaaacc 177290 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| |||| |||||||||||| | || Sbjct: 177291 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgcagctaggcgaagcagcccga 177350 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 177351 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttaggctctga 177410 Query: 360 cc 361 || Sbjct: 177411 cc 177412 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 153 gcgaactgaaacatcttagtagc 175 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 153 gcgaactgaaacatcttagtagc 175 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 454 bits (229), Expect = e-124 Identities = 247/253 (97%), Gaps = 5/253 (1%) Strand = Plus / Minus Query: 203 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 263 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 323 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 382 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 383 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 437 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 438 cgatagcgaagta 450 ||||||||||||| Sbjct: 75238 cgatagcgaagta 75226 Score = 381 bits (192), Expect = e-102 Identities = 204/207 (98%), Gaps = 1/207 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 75690 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 75632 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 75631 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 75572 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75571 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 75512 Query: 181 gaaaagaaagcaaaagcgattcccgta 207 ||||||||||||||||||||||||||| Sbjct: 75511 gaaaagaaagcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 134 gcaggcaagagacaacctggcgaactgaaacatcttagta 173 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 454 bits (229), Expect = e-124 Identities = 247/253 (97%), Gaps = 5/253 (1%) Strand = Plus / Plus Query: 203 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 263 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 323 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 382 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 383 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 437 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 438 cgatagcgaagta 450 ||||||||||||| Sbjct: 382300 cgatagcgaagta 382312 Score = 381 bits (192), Expect = e-102 Identities = 204/207 (98%), Gaps = 1/207 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 381848 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 381906 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 381907 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 381966 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381967 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 382026 Query: 181 gaaaagaaagcaaaagcgattcccgta 207 ||||||||||||||||||||||||||| Sbjct: 382027 gaaaagaaagcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 134 gcaggcaagagacaacctggcgaactgaaacatcttagta 173 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 134 gcaggcaagagacaacctggcgaactgaaacatcttagta 173 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 454 bits (229), Expect = e-124 Identities = 247/253 (97%), Gaps = 5/253 (1%) Strand = Plus / Minus Query: 203 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 263 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 323 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 382 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 383 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 437 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 438 cgatagcgaagta 450 ||||||||||||| Sbjct: 113329 cgatagcgaagta 113317 Score = 381 bits (192), Expect = e-102 Identities = 204/207 (98%), Gaps = 1/207 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 113781 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 113723 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 113722 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 113663 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113662 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 113603 Query: 181 gaaaagaaagcaaaagcgattcccgta 207 ||||||||||||||||||||||||||| Sbjct: 113602 gaaaagaaagcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 134 gcaggcaagagacaacctggcgaactgaaacatcttagta 173 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 454 bits (229), Expect = e-124 Identities = 247/253 (97%), Gaps = 5/253 (1%) Strand = Plus / Minus Query: 203 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 263 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 323 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 382 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 383 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 437 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 438 cgatagcgaagta 450 ||||||||||||| Sbjct: 368011 cgatagcgaagta 367999 Score = 454 bits (229), Expect = e-124 Identities = 247/253 (97%), Gaps = 5/253 (1%) Strand = Plus / Minus Query: 203 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 263 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 323 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 382 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 383 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 437 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 438 cgatagcgaagta 450 ||||||||||||| Sbjct: 184616 cgatagcgaagta 184604 Score = 381 bits (192), Expect = e-102 Identities = 204/207 (98%), Gaps = 1/207 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 368463 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 368405 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 368404 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 368345 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368344 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 368285 Query: 181 gaaaagaaagcaaaagcgattcccgta 207 ||||||||||||||||||||||||||| Sbjct: 368284 gaaaagaaagcaaaagcgattcccgta 368258 Score = 381 bits (192), Expect = e-102 Identities = 204/207 (98%), Gaps = 1/207 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 185068 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 185010 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 185009 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 184950 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184949 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 184890 Query: 181 gaaaagaaagcaaaagcgattcccgta 207 ||||||||||||||||||||||||||| Sbjct: 184889 gaaaagaaagcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 134 gcaggcaagagacaacctggcgaactgaaacatcttagta 173 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 99 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 158 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 159 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 218 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 219 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 278 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 279 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 338 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 339 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 398 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 399 gcaaggaccaccttgcaag 417 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/88 (87%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||| |||||||| | |||||||||||| ||| |||||||||||||||| | Sbjct: 3780 ggtggatacctatgcacccagag-acgaggaagggcatagttagcgacgaaatgcttcag 3722 Query: 61 ggagttgaaaataagcatagatccggag 88 |||||| |||||||| |||||| |||| Sbjct: 3721 agagttgcaaataagcgtagatcaggag 3694
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 196 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 255 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 256 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 314 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 315 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 374 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 375 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 434 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 435 gaccgata 442 |||||||| Sbjct: 241 gaccgata 248
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 402 bits (203), Expect = e-109 Identities = 246/258 (95%), Gaps = 2/258 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 79748 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 79690 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 79689 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 79631 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79630 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 79571 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 79570 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaacc 79511 Query: 241 gtgaaaacggggttgtgg 258 |||||||||||||||||| Sbjct: 79510 gtgaaaacggggttgtgg 79493
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 392 bits (198), Expect = e-106 Identities = 210/213 (98%), Gaps = 1/213 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 75788 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 75846 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75847 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 75906 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75907 gcggaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 75966 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcg 213 ||||||||||||||||||||||||||||||||| Sbjct: 75967 gaaaagaaagcaaaagcgattcccgtagtagcg 75999 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ggcgaactgaaacatcttag 171 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 383 bits (193), Expect = e-103 Identities = 385/448 (85%), Gaps = 1/448 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||| ||||||||| |||| |||||||||||||||| Sbjct: 143941 ggtggatacctaggcacccagag-acgaagaagggcgtggcaaacgacgaaatgcttcgg 143999 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| ||||||| | |||||||||||||||||| ||||||| |||||| ||||||||| Sbjct: 144000 ggagccgaaaataggtatagatccggagattcccgaataggttaaccttccaaactgcct 144059 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || ||||| |||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 144060 gctgaattcagaagcagacaagagacaacccggcgaactgaaacatcttagtagccggag 144119 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 || | |||||||||||||||||| ||||| ||||||| |||| |||| |||||||||| Sbjct: 144120 gaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaacc 144179 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||| ||||||||||||||||| || || | || | ||||||||||| |||||| Sbjct: 144180 gtgaagacggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgag 144239 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||| |||||| | ||||||||||||| ||| | |||||| | |||| || Sbjct: 144240 tgctgcaccccagatggtgatagtccagtagccggaagtacagctagctcacgctccaac 144299 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 || |||||||||||||||| |||||||||||||||||| |||||||||||| |||||| Sbjct: 144300 ccaagtagcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggct 144359 Query: 421 aaatactcctgggtgaccgatagcgaag 448 ||||| ||||| |||||||||||||||| Sbjct: 144360 aaatattcctgagtgaccgatagcgaag 144387 Score = 383 bits (193), Expect = e-103 Identities = 385/448 (85%), Gaps = 1/448 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||| ||||||||| |||| |||||||||||||||| Sbjct: 88910 ggtggatacctaggcacccagag-acgaagaagggcgtggcaaacgacgaaatgcttcgg 88852 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| ||||||| | |||||||||||||||||| ||||||| |||||| ||||||||| Sbjct: 88851 ggagccgaaaataggtatagatccggagattcccgaataggttaaccttccaaactgcct 88792 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || ||||| |||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 88791 gctgaattcagaagcagacaagagacaacccggcgaactgaaacatcttagtagccggag 88732 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 || | |||||||||||||||||| ||||| ||||||| |||| |||| |||||||||| Sbjct: 88731 gaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaacc 88672 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||| ||||||||||||||||| || || | || | ||||||||||| |||||| Sbjct: 88671 gtgaagacggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgag 88612 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||| |||||| | ||||||||||||| ||| | |||||| | |||| || Sbjct: 88611 tgctgcaccccagatggtgatagtccagtagccggaagtacagctagctcacgctccaac 88552 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 || |||||||||||||||| |||||||||||||||||| |||||||||||| |||||| Sbjct: 88551 ccaagtagcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggct 88492 Query: 421 aaatactcctgggtgaccgatagcgaag 448 ||||| ||||| |||||||||||||||| Sbjct: 88491 aaatattcctgagtgaccgatagcgaag 88464
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 297 bits (150), Expect = 2e-77 Identities = 382/455 (83%), Gaps = 16/455 (3%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||||||||| | |||||||||||||||||| ||||| |||||||||| Sbjct: 139247 ggtggatacctaggcacccaaag-acgaggaagggcgtagcaggcgac--aatgcttcgg 139191 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 | || | |||||||||||||||||||| ||| ||| ||| |||| || ||||||| Sbjct: 139190 gaagccagagataagcatagatccggagatccccgaatgggttaaccccttgaactgcc- 139132 Query: 121 gctgaatccatgagcagg----caagagacaacctggcgaactgaaacatcttagtagcc 176 ||||||||| | || |||||||| ||| ||||||| |||||||| | ||||| Sbjct: 139131 ---gaatccatgggatgggcggcaagagacgacccggcgaaccgaaacatccaaatagcc 139075 Query: 177 agaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagccta 236 | |||| |||| |||||||||||||||| |||||||||||||||| ||||| |||||| Sbjct: 139074 gggggaagagaaggcaaaagcgattcccgcagtagcggcgagcgaagagggagtagccta 139015 Query: 237 aaccgtgaaaacggggttgtgggagagcaatac----aagcgttgtgctgctaggcgaag 292 ||||||| ||||||||||||||||||| ||| ||| ||||||||| |||| |||| Sbjct: 139014 aaccgtgggaacggggttgtgggagagcgataagtataag-gttgtgctgttaggtgaag 138956 Query: 293 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 352 |||| |||| ||||| || ||| || || ||||| ||||||| ||||| ||| ||||| Sbjct: 138955 cggtcgagtcccgcatcccagacggttagagtccggtagccggaagcagcacaggcttac 138896 Query: 353 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 412 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 138895 gctctgacccgagtagcatggggcacgtggaatcccgtgcgaatcagcgaggaccacctc 138836 Query: 413 gcaaggctaaatactcctgggtgaccgatagcgaa 447 | ||||||||||||| ||||||||||||||||||| Sbjct: 138835 gtaaggctaaatacttctgggtgaccgatagcgaa 138801 Score = 297 bits (150), Expect = 2e-77 Identities = 382/455 (83%), Gaps = 16/455 (3%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||||||||| | |||||||||||||||||| ||||| |||||||||| Sbjct: 82630 ggtggatacctaggcacccaaag-acgaggaagggcgtagcaggcgac--aatgcttcgg 82686 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 | || | |||||||||||||||||||| ||| ||| ||| |||| || ||||||| Sbjct: 82687 gaagccagagataagcatagatccggagatccccgaatgggttaaccccttgaactgcc- 82745 Query: 121 gctgaatccatgagcagg----caagagacaacctggcgaactgaaacatcttagtagcc 176 ||||||||| | || |||||||| ||| ||||||| |||||||| | ||||| Sbjct: 82746 ---gaatccatgggatgggcggcaagagacgacccggcgaaccgaaacatccaaatagcc 82802 Query: 177 agaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagccta 236 | |||| |||| |||||||||||||||| |||||||||||||||| ||||| |||||| Sbjct: 82803 gggggaagagaaggcaaaagcgattcccgcagtagcggcgagcgaagagggagtagccta 82862 Query: 237 aaccgtgaaaacggggttgtgggagagcaatac----aagcgttgtgctgctaggcgaag 292 ||||||| ||||||||||||||||||| ||| ||| ||||||||| |||| |||| Sbjct: 82863 aaccgtgggaacggggttgtgggagagcgataagtataag-gttgtgctgttaggtgaag 82921 Query: 293 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 352 |||| |||| ||||| || ||| || || ||||| ||||||| ||||| ||| ||||| Sbjct: 82922 cggtcgagtcccgcatcccagacggttagagtccggtagccggaagcagcacaggcttac 82981 Query: 353 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 412 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 82982 gctctgacccgagtagcatggggcacgtggaatcccgtgcgaatcagcgaggaccacctc 83041 Query: 413 gcaaggctaaatactcctgggtgaccgatagcgaa 447 | ||||||||||||| ||||||||||||||||||| Sbjct: 83042 gtaaggctaaatacttctgggtgaccgatagcgaa 83076
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 291 bits (147), Expect = 1e-75 Identities = 219/242 (90%), Gaps = 1/242 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgg 81 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| ||| || |||||| ||||||||||| ||| |||||| ||||| || ||||||| Sbjct: 82 ggagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcct 141 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142 gctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagag 201 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 202 gaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaacc 261 Query: 241 gt 242 || Sbjct: 262 gt 263 Score = 143 bits (72), Expect = 6e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 359 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 418 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 419 ctaaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||| |||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagta 482
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 287 bits (145), Expect = 2e-74 Identities = 160/164 (97%), Gaps = 1/164 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 1567 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 1625 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1626 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 1685 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaac 164 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1686 gctgaatccatgagcaggcaagagacaacctggcgaactgaaac 1729
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 281 bits (142), Expect = 1e-72 Identities = 217/241 (90%), Gaps = 1/241 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||| Sbjct: 127 ggtggatacctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgg 185 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 | || ||| || |||||| ||||||||||| ||| |||||| ||||| || ||||||| Sbjct: 186 gaagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcct 245 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 gctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagag 305 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 306 gaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaacc 365 Query: 241 g 241 | Sbjct: 366 g 366 Score = 141 bits (71), Expect = 2e-30 Identities = 86/91 (94%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||| |||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagta 586
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 280 bits (141), Expect = 4e-72 Identities = 217/242 (89%), Gaps = 1/242 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 || ||| |||||||||||||| | |||| ||||||||||||||||||||||||||||||| Sbjct: 10 ggyggagacctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgg 68 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| ||| || |||||| ||||||||||| ||| |||||| ||||| || ||||||| Sbjct: 69 ggagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcct 128 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 gctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagag 188 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 189 gaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaacc 248 Query: 241 gt 242 || Sbjct: 249 gt 250 Score = 143 bits (72), Expect = 6e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 359 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 418 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 419 ctaaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||| |||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagta 469
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 280 bits (141), Expect = 4e-72 Identities = 234/264 (88%), Gaps = 1/264 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||| ||||||||| | ||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcgg 81 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| || || ||||||||||||| ||| ||| |||||| |||||| || ||| | | Sbjct: 82 ggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactactt 141 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||||| Sbjct: 142 gctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccagag 201 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 202 gaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaacc 261 Query: 241 gtgaaaacggggttgtgggagagc 264 | |||| ||||||||||||||||| Sbjct: 262 gcgaaagcggggttgtgggagagc 285 Score = 143 bits (72), Expect = 6e-31 Identities = 144/168 (85%) Strand = Plus / Plus Query: 281 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 340 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 341 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 400 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 401 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 448 |||||||||| | ||||||||||||||||||||||||||||| |||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaag 469
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 280 bits (141), Expect = 4e-72 Identities = 234/264 (88%), Gaps = 1/264 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||| ||||||||| | ||||||||||||||||||| Sbjct: 125242 ggtggatacctaggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcgg 125184 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| || || ||||||||||||| ||| ||| |||||| |||||| || ||| | | Sbjct: 125183 ggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactactt 125124 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||||| Sbjct: 125123 gctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccagag 125064 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 125063 gaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaacc 125004 Query: 241 gtgaaaacggggttgtgggagagc 264 | |||| ||||||||||||||||| Sbjct: 125003 gcgaaagcggggttgtgggagagc 124980 Score = 280 bits (141), Expect = 4e-72 Identities = 234/264 (88%), Gaps = 1/264 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||| ||||||||| | ||||||||||||||||||| Sbjct: 94624 ggtggatacctaggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcgg 94682 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| || || ||||||||||||| ||| ||| |||||| |||||| || ||| | | Sbjct: 94683 ggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactactt 94742 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||||| Sbjct: 94743 gctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccagag 94802 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 94803 gaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaacc 94862 Query: 241 gtgaaaacggggttgtgggagagc 264 | |||| ||||||||||||||||| Sbjct: 94863 gcgaaagcggggttgtgggagagc 94886 Score = 143 bits (72), Expect = 6e-31 Identities = 144/168 (85%) Strand = Plus / Minus Query: 281 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 340 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 341 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 400 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 401 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 448 |||||||||| | ||||||||||||||||||||||||||||| |||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaag 124796 Score = 143 bits (72), Expect = 6e-31 Identities = 144/168 (85%) Strand = Plus / Plus Query: 281 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 340 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 341 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 400 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 401 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 448 |||||||||| | ||||||||||||||||||||||||||||| |||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaag 95070
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 276 bits (139), Expect = 6e-71 Identities = 190/207 (91%) Strand = Plus / Minus Query: 244 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 303 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 304 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 363 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 364 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 424 tactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||| Sbjct: 6104 tactcctgggtgaccgatagcgaagta 6078 Score = 262 bits (132), Expect = 9e-67 Identities = 185/200 (92%), Gaps = 2/200 (1%) Strand = Plus / Minus Query: 43 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 102 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 103 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 162 |||||||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 163 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 222 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6394 acatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaa 6335 Query: 223 atgggagcagcctaaaccgt 242 |||||||||||||||||||| Sbjct: 6334 atgggagcagcctaaaccgt 6315
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 274 bits (138), Expect = 2e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 25 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434061 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19434002 Query: 85 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 144 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19434001 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19433942 Query: 145 acaacctggcgaactgaaacat 166 |||||||||||||||||||||| Sbjct: 19433941 acaacctggcgaactgaaacat 19433920
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 274 bits (138), Expect = 2e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 25 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51588 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 51529 Query: 85 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 144 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 51528 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 51469 Query: 145 acaacctggcgaactgaaacat 166 |||||||||||||||||||||| Sbjct: 51468 acaacctggcgaactgaaacat 51447
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 305 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 364 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 365 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 424 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 425 actcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagta 155
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 274 bits (138), Expect = 2e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 25 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119552 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119493 Query: 85 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 144 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119492 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119433 Query: 145 acaacctggcgaactgaaacat 166 |||||||||||||||||||||| Sbjct: 119432 acaacctggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 274 bits (138), Expect = 2e-70 Identities = 141/142 (99%) Strand = Plus / Plus Query: 25 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6070 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 6129 Query: 85 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 144 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 6130 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 6189 Query: 145 acaacctggcgaactgaaacat 166 |||||||||||||||||||||| Sbjct: 6190 acaacctggcgaactgaaacat 6211
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 258 bits (130), Expect = 1e-65 Identities = 133/134 (99%) Strand = Plus / Plus Query: 317 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 376 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 377 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 437 ccgatagcgaagta 450 |||||||||||||| Sbjct: 121 ccgatagcgaagta 134
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 254 bits (128), Expect = 2e-64 Identities = 378/452 (83%), Gaps = 11/452 (2%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | | || ||||||| || || || ||||||||| || Sbjct: 21 ggtggatacctaggcacccaggg-atgaagaagggcataataattgatgaaatgctttgg 79 Query: 61 ggagttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcc 119 |||||| |||| ||| ||||||||||||||||||| ||||||| ||||||| |||||| Sbjct: 80 ggagttaaaaaataaacatagatccggagattcccgaataggtaaaccttt--aactgc- 136 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 |||| | |||||| |||| ||||||| ||||||| ||||||||||||||||||||||||| Sbjct: 137 tgcttattccatg-gcagacaagaga-aacctggtgaactgaaacatcttagtagccaga 194 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 |||||| |||||||||| |||||| |||||| ||| | |||| |||| ||||||||| Sbjct: 195 ggaaaataaagcaaaagttattcccatagtagtggcaaatgaaaagggaacagcctaaat 254 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 299 || |||| |||||| || |||||||| ||| || || |||||| || || || || Sbjct: 255 cgctaaaatggggtt---ggggagcaataaaagtattttgttgctagacggagtagtgga 311 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgc-tctg 358 || | | ||||||||||| | |||||||||| |||| |||| |||||||||| | | Sbjct: 312 gttctgaaccctagatggtgagagtccagtagtataaagtatcattagcttatgctttta 371 Query: 359 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 418 |||||||||||||||| || |||||||||||||||||||||||||||||||||| |||| Sbjct: 372 acccgagtagcatgggacatatggaatcccgtgtgaatcagcaaggaccaccttgaaagg 431 Query: 419 ctaaatactcctgggtgaccgatagcgaagta 450 |||||||||| ||||||||| |||| |||||| Sbjct: 432 ctaaatactcttgggtgaccaatagtgaagta 463
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 254 bits (128), Expect = 2e-64 Identities = 181/195 (92%), Gaps = 3/195 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaa-tgcttcg 59 |||||||||| |||||||||| | ||||||||| |||||| ||||||||||| ||||||| Sbjct: 89860 ggtggataccaaggcacccagag-acgaggaagagcgtagtaagcgacgaaaatgcttcg 89802 Query: 60 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 119 ||||||||||||||||| |||||||||||||||| ||||||| |||||||| |||||| Sbjct: 89801 gggagttgaaaataagcgtagatccggagattccggaataggttaaccttttgaactgc- 89743 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 89742 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccaga 89683 Query: 180 ggaaaagaaagcaaa 194 ||||||||||||||| Sbjct: 89682 ggaaaagaaagcaaa 89668
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 254 bits (128), Expect = 2e-64 Identities = 181/195 (92%), Gaps = 3/195 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaa-tgcttcg 59 |||||||||| |||||||||| | ||||||||| |||||| ||||||||||| ||||||| Sbjct: 410 ggtggataccaaggcacccagag-acgaggaagagcgtagtaagcgacgaaaatgcttcg 468 Query: 60 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 119 ||||||||||||||||| |||||||||||||||| ||||||| |||||||| |||||| Sbjct: 469 gggagttgaaaataagcgtagatccggagattccggaataggttaaccttttgaactgc- 527 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 528 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccaga 587 Query: 180 ggaaaagaaagcaaa 194 ||||||||||||||| Sbjct: 588 ggaaaagaaagcaaa 602
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 252 bits (127), Expect = 9e-64 Identities = 130/131 (99%) Strand = Plus / Plus Query: 320 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 379 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 380 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 440 atagcgaagta 450 ||||||||||| Sbjct: 123 atagcgaagta 133
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 3e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 288 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 347 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 348 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 407 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 408 accttgcaaggctaaatactcctgggtgaccga 440 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 228 bits (115), Expect = 1e-56 Identities = 226/262 (86%), Gaps = 1/262 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||||| |||| | |||| ||||||||||| ||||||||||||||||||| Sbjct: 23 ggtggatacctaggcatccagag-acgaagaagggcgtagtaagcgacgaaatgcttcgg 81 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| || || ||| ||||||||| |||||||| |||||| |||||| || ||| ||| Sbjct: 82 ggagctgcgaacaagtatagatccgaagattcccgaatagggcaacctcttgtactacct 141 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 | ||| ||| | |||| ||||| ||||| | ||||||||||||||||||||| |||| Sbjct: 142 gtaaaatacataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagag 201 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| | |||||||||||||||||| |||||| ||||||||||| |||| ||||||||||| Sbjct: 202 gaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaacc 261 Query: 241 gtgaaaacggggttgtgggaga 262 |||||| ||||||||||||||| Sbjct: 262 gtgaaagcggggttgtgggaga 283 Score = 113 bits (57), Expect = 5e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 364 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 423 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 424 tactcctgggtgaccgatagcgaag 448 |||||||||||||||||||| |||| Sbjct: 445 tactcctgggtgaccgatagtgaag 469
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 228 bits (115), Expect = 1e-56 Identities = 209/238 (87%), Gaps = 2/238 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| || ||| | |||| ||||||||||| ||||||||||||||||||| Sbjct: 4056 ggtggatacctaggtactcagag-acgaagaagggcgtagtaagcgacgaaatgcttcgg 4114 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||| ||||| | |||||||||||||||||||| ||| || |||| || |||||| Sbjct: 4115 ggagtcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc- 4173 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||||||| || | |||||| ||||||| |||||||||||||||||||||||||| Sbjct: 4174 gctgaatccataggcggataagagagaacctggtgaactgaaacatcttagtagccagag 4233 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 238 ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 4234 gaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 4291 Score = 125 bits (63), Expect = 1e-25 Identities = 123/143 (86%) Strand = Plus / Plus Query: 305 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 364 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 365 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 424 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 425 actcctgggtgaccgatagcgaa 447 |||||||||| |||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaa 4512
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 228 bits (115), Expect = 1e-56 Identities = 209/238 (87%), Gaps = 2/238 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| || ||| | |||| ||||||||||| ||||||||||||||||||| Sbjct: 23 ggtggatacctaggtactcagag-acgaagaagggcgtagtaagcgacgaaatgcttcgg 81 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||| ||||| | |||||||||||||||||||| ||| || |||| || |||||| Sbjct: 82 ggagtcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc- 140 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||||||| || | |||||| ||||||| |||||||||||||||||||||||||| Sbjct: 141 gctgaatccataggcggataagagagaacctggtgaactgaaacatcttagtagccagag 200 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 238 ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 201 gaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 258 Score = 125 bits (63), Expect = 1e-25 Identities = 123/143 (86%) Strand = Plus / Plus Query: 305 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 364 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 365 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 424 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 425 actcctgggtgaccgatagcgaa 447 |||||||||| |||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaa 479
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 220 bits (111), Expect = 3e-54 Identities = 208/238 (87%), Gaps = 2/238 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| || ||| | |||| ||||||||||| ||||||||||||||||||| Sbjct: 23 ggtggatacctaggtactcagag-acgaagaagggcgtagtaagcgacgaaatgcttcgg 81 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||| ||||| | |||||||||||||||||||| ||| || |||| || |||||| Sbjct: 82 ggagtcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc- 140 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| || | |||||| ||||||| |||||||||||||||||||||||||| Sbjct: 141 gctgaatacataggcggataagagagaacctggtgaactgaaacatcttagtagccagag 200 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 238 ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 201 gaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 258 Score = 125 bits (63), Expect = 1e-25 Identities = 123/143 (86%) Strand = Plus / Plus Query: 305 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 364 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 365 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 424 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 425 actcctgggtgaccgatagcgaa 447 |||||||||| |||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaa 479
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 212 bits (107), Expect = 7e-52 Identities = 224/262 (85%), Gaps = 1/262 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||||| |||| | |||| ||||||||||| |||||||||||||||| || Sbjct: 3057 ggtggatacctaggcatccagag-acgaagaagggcgtagtaagcgacgaaatgctttgg 3115 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| || || ||| ||||||||| |||||||| |||||| |||||| || ||| ||| Sbjct: 3116 ggagctgcgaacaagtatagatccgaagattcccgaatagggcaacctcttgtactacct 3175 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 | ||| ||| |||| ||||| ||||| | ||||||||||||||||||||| |||| Sbjct: 3176 gtaaaatacatagtcaggttagagaaaacctagtgaactgaaacatcttagtagctagag 3235 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| | |||||||||||||||||| |||||| ||||||||||| |||| ||||||||||| Sbjct: 3236 gaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaacc 3295 Query: 241 gtgaaaacggggttgtgggaga 262 |||||| ||||||||||||||| Sbjct: 3296 gtgaaagcggggttgtgggaga 3317 Score = 113 bits (57), Expect = 5e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 364 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 423 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 424 tactcctgggtgaccgatagcgaag 448 |||||||||||||||||||| |||| Sbjct: 3479 tactcctgggtgaccgatagtgaag 3503
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 208 bits (105), Expect = 1e-50 Identities = 222/260 (85%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||||| |||| | |||| ||||||||||| |||||||||||||||||| Sbjct: 23 ggtggatacctaggcatccagag-acgaagaagggcgtagtcagcgacgaaatgcttcgg 81 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| || || ||||||| ||||| |||||||| |||||| ||||| || ||| ||| Sbjct: 82 ggagctgcgaacaagcataaatccgaagattcccgaatagggtaacctcttgtactacct 141 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 | |||| || | |||| ||||| ||||| | ||||||||||||||||||||| |||| Sbjct: 142 gtagaattaataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagag 201 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||| ||||||||||| |||| ||||||||||| Sbjct: 202 gaaaagaaagcaaaagcgattccctcagtagtggcgagcgaaacgggaacagcctaaacc 261 Query: 241 gtgaaaacggggttgtggga 260 | |||| ||||||||||||| Sbjct: 262 gcgaaagcggggttgtggga 281 Score = 97.6 bits (49), Expect = 3e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 364 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 423 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 424 tactcctgggtgaccgatagcgaag 448 |||||||||||||||||||| |||| Sbjct: 445 tactcctgggtgaccgatagtgaag 469
>gb|AF482503.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 906 Score = 200 bits (101), Expect = 3e-48 Identities = 164/184 (89%), Gaps = 1/184 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||| |||||||||| || |||||||| ||||||| Sbjct: 724 ggtggatacctaggcacccagag-acgaagaagggcgtactaaccgacgaaacgcttcgg 782 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| |||||| |||||| ||||||||||||||| |||||| |||||| || |||| ||| Sbjct: 783 ggagctgaaaagaagcattgatccggagattcccgaatagggcaacctcttgaacttcct 842 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 843 gctgaattcataggcaggatagagacaacctggcgaactgaaacatcttagtagccagag 902 Query: 181 gaaa 184 |||| Sbjct: 903 gaaa 906
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 198 bits (100), Expect = 1e-47 Identities = 207/239 (86%), Gaps = 3/239 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| || ||| | |||| ||||||||||| ||||||||||| ||||||| Sbjct: 23 ggtggatacctaggtactcagag-acgaagaagggcgtagtaagcgacgaaacgcttcgg 81 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct-tttaaactgcc 119 ||||| ||||| | | ||||||||||||||||| ||| || |||| ||| |||||| Sbjct: 82 ggagtcgaaaacagacgtagatccggagattcccgaatggggtaacccctttgtactgcc 141 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 ||||||| ||| ||| | |||||||||||||| ||||||||||||||||||| ||||| Sbjct: 142 -gctgaattcataagcggataagagacaacctggtgaactgaaacatcttagtaaccaga 200 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 238 |||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 201 ggaaaagaaagcaaaagcgatttcctgagtagcggcgagcgaaatgggagaagcctaaa 259 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Plus Query: 353 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 412 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 413 gcaaggctaaatactcctgggtgaccgatagcgaa 447 ||||||||||||||| |||||| |||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaa 474
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 192 bits (97), Expect = 7e-46 Identities = 220/260 (84%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||||| |||| | |||| ||||||||||| ||||||||||||||||||| Sbjct: 1790 ggtggatacctaggcatccagag-acgaagaagggcgtagtaagcgacgaaatgcttcgg 1848 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| || || ||| ||| ||||| |||||||| |||||| ||||| || ||| ||| Sbjct: 1849 ggagctgcgaacaagtataaatccgaagattcccgaatagggtaacctcttgtactacct 1908 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 | |||| || | |||| ||||| ||||| | ||||||||||||||||||||| |||| Sbjct: 1909 gtataatcaataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagag 1968 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| | |||||||||||||||||| |||||| ||||||||||| |||| | ||||||||| Sbjct: 1969 gaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaaccgcctaaacc 2028 Query: 241 gtgaaaacggggttgtggga 260 || ||| ||||||||||||| Sbjct: 2029 gttaaagcggggttgtggga 2048 Score = 121 bits (61), Expect = 2e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 364 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 423 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 424 tactcctgggtgaccgatagcgaag 448 ||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaag 2236
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 184 bits (93), Expect = 2e-43 Identities = 204/240 (85%), Gaps = 1/240 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||||| |||| | |||| |||||||||| || |||||||| ||| ||| Sbjct: 115653 ggtggatacctaggcatccagag-acgacgaagggcgtactaatcgacgaaacgctccgg 115595 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 | || ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| | Sbjct: 115594 gaagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctcc 115535 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || || | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 115534 gctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccagag 115475 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 115474 gaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 184 bits (93), Expect = 2e-43 Identities = 204/240 (85%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||||| |||| | |||| |||||||||| || |||||||| ||| ||| Sbjct: 86335 ggtggatacctaggcatccagag-acgacgaagggcgtactaatcgacgaaacgctccgg 86393 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 | || ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| | Sbjct: 86394 gaagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctcc 86453 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || || | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 86454 gctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccagag 86513 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 86514 gaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 86573 Score = 127 bits (64), Expect = 3e-26 Identities = 82/88 (93%) Strand = Plus / Minus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 420 taaatactcctgggtgaccgatagcgaa 447 |||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaa 115197 Score = 127 bits (64), Expect = 3e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 420 taaatactcctgggtgaccgatagcgaa 447 |||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaa 86791
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 184 bits (93), Expect = 2e-43 Identities = 185/212 (87%), Gaps = 4/212 (1%) Strand = Plus / Plus Query: 30 gaagggcgtagcaagcgacgaaatgct-tcggggagttgaaaataagcatagatccggag 88 |||||||||| |||||||||||||||| |||| |||| || |||| || ||||||||| Sbjct: 7 gaagggcgtaacaagcgacgaaatgctctcggagagtcgagaataggct--gatccggag 64 Query: 89 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 148 || ||| |||||| ||||| |||||||| |||||||| || |||| | ||||| || Sbjct: 65 atccccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgagagataa 123 Query: 149 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 124 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctcag 183 Query: 209 tagcggcgagcgaaatgggagcagcctaaacc 240 ||| |||||||||||||||| ||||||||||| Sbjct: 184 tagtggcgagcgaaatgggaacagcctaaacc 215 Score = 151 bits (76), Expect = 2e-33 Identities = 88/92 (95%) Strand = Plus / Plus Query: 359 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 418 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 419 ctaaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||| |||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagta 428
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 182 bits (92), Expect = 7e-43 Identities = 218/255 (85%), Gaps = 4/255 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | | || ||||||| || || || |||||||||||| Sbjct: 21 ggtggatacctaggcacccaggg-atgaagaagggcataataattgatgaaatgcttcgg 79 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||| ||||||| ||||||||||||||||||| ||||||| ||||||| |||||| || Sbjct: 80 ggagttaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ct 138 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||| | |||||| |||| ||| ||| ||||||| |||||||| ||||||||||| ||||| Sbjct: 139 gcttattccatg-gcagacaaaaga-aacctggtgaactgaatcatcttagtagacagag 196 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||||| |||||||||| ||| || |||||| |||||| |||| |||| ||||||||||| Sbjct: 197 gaaaataaagcaaaagttattaccatagtagtggcgagtgaaaagggaacagcctaaacc 256 Query: 241 gtgaaaacggggttg 255 | |||| ||||||| Sbjct: 257 gctaaaatggggttg 271 Score = 167 bits (84), Expect = 4e-38 Identities = 129/144 (89%) Strand = Plus / Plus Query: 307 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 366 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 367 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 426 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 427 tcctgggtgaccgatagcgaagta 450 || ||||||||| |||| |||||| Sbjct: 452 tcttgggtgaccaatagtgaagta 475
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 176 bits (89), Expect = 4e-41 Identities = 206/242 (85%), Gaps = 4/242 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||| |||| || |||| ||||||||||| ||||||||||||||||||| Sbjct: 426 ggtggatacctagacacctaga-aacgatgaagggcgtagaaagcgacgaaatgcttcgg 484 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 | || || ||| || | |||||||||||| |||||| |||||| | ||||||| | Sbjct: 485 ttaactgcgaacaag--taaacccggagattcccgaatagggcaacctgt-aaactgctt 541 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| || | |||||||||||||| ||||||||||||||||||| |||||| Sbjct: 542 gctgaattcataggcgagtaagagacaacctggtgaactgaaacatcttagtaaccagag 601 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| |||||||||||||||||||| |||||| ||||||||||| |||| ||||||||||| Sbjct: 602 gaacagaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaacc 661 Query: 241 gt 242 || Sbjct: 662 gt 663 Score = 99.6 bits (50), Expect = 8e-18 Identities = 80/90 (88%) Strand = Plus / Plus Query: 359 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 418 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 419 ctaaatactcctgggtgaccgatagcgaag 448 |||||||||||| ||||| |||||| |||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaag 873
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 174 bits (88), Expect = 2e-40 Identities = 109/116 (93%) Strand = Plus / Plus Query: 335 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 394 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 395 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagta 488 Score = 133 bits (67), Expect = 5e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 134 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 193 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 194 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 253 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 254 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 313 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 314 a 314 | Sbjct: 325 a 325
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 174 bits (88), Expect = 2e-40 Identities = 205/241 (85%), Gaps = 3/241 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 || ||| |||||||||| ||| | |||| ||||||||| | || | |||||||||||||| Sbjct: 10 ggyggagacctaggcactcagag-acgaagaagggcgtggaaaccaacgaaatgcttcgg 68 Query: 61 ggagttgaaaataagc-atagatccggagattcccaaataggtcaaccttttaaactgcc 119 |||| || ||| |||| ||| |||||||||||||| |||||| |||||| || ||| || Sbjct: 69 ggagctggaaacaagctata-atccggagattcccgaatagggcaacctcttgtactacc 127 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 | ||||| ||| ||| ||||||||||| || ||| |||||||||||||||||| || Sbjct: 128 tattgaattcatagataggaaagagacaacccggtgaattgaaacatcttagtagccgga 187 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 188 ggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaatgggaacagcctaaac 247 Query: 240 c 240 | Sbjct: 248 c 248 Score = 111 bits (56), Expect = 2e-21 Identities = 80/88 (90%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| |||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 377 cccgagtagcatgggacacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 436 Query: 420 taaatactcctgggtgaccgatagcgaa 447 |||||||||||| |||||| |||||||| Sbjct: 437 taaatactcctgagtgaccaatagcgaa 464
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 172 bits (87), Expect = 6e-40 Identities = 202/240 (84%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 || ||| ||||||||| |||| | |||| |||||||||| || |||||||| ||| ||| Sbjct: 10 ggyggagacctaggcatccagag-acgacgaagggcgtactaatcgacgaaacgctccgg 68 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 | || ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| | Sbjct: 69 gaagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctcc 128 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || || | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 129 gctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccagag 188 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 189 gaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 248 Score = 127 bits (64), Expect = 3e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 420 taaatactcctgggtgaccgatagcgaa 447 |||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaa 465
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 167 bits (84), Expect = 4e-38 Identities = 84/84 (100%) Strand = Plus / Plus Query: 367 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 427 tcctgggtgaccgatagcgaagta 450 |||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagta 84
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 165 bits (83), Expect = 2e-37 Identities = 123/135 (91%), Gaps = 1/135 (0%) Strand = Plus / Plus Query: 313 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 371 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 372 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 431 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 432 ggtgaccgatagcga 446 ||||||||||||||| Sbjct: 95372 ggtgaccgatagcga 95386
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 165 bits (83), Expect = 2e-37 Identities = 123/135 (91%), Gaps = 1/135 (0%) Strand = Plus / Minus Query: 313 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 371 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 372 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 431 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 432 ggtgaccgatagcga 446 ||||||||||||||| Sbjct: 817 ggtgaccgatagcga 803
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 165 bits (83), Expect = 2e-37 Identities = 123/135 (91%), Gaps = 1/135 (0%) Strand = Plus / Plus Query: 313 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 371 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 372 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 431 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 432 ggtgaccgatagcga 446 ||||||||||||||| Sbjct: 11893645 ggtgaccgatagcga 11893659
>gb|AF141148.1|AF141148 Vigna unguiculata clone VU53KNF3-2 16S ribsomal RNA gene; partial sequence, tRNA-Ile gene; complete sequence, and 18S ribosomal RNA gene; partial sequence; chloroplast genes for chloroplast products Length = 387 Score = 165 bits (83), Expect = 2e-37 Identities = 121/130 (93%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 136 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 78 Query: 61 ggagttgaaaataagcatagatccggagattccc-aaataggtcaaccttttaaactgcc 119 |||||||||||||||| ||||||||||||||||| | |||||||||||||| ||||| | Sbjct: 77 ggagttgaaaataagcgtagatccggagattcccgatataggtcaacctttcgaactg-c 19 Query: 120 tgctgaatcc 129 |||||||||| Sbjct: 18 tgctgaatcc 9
>gb|AF142335.1|AF142335 Vigna vexillata clone TVBA27 putative ribosomal RNA genomic sequence Length = 383 Score = 165 bits (83), Expect = 2e-37 Identities = 121/130 (93%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 130 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 72 Query: 61 ggagttgaaaataagcatagatccggagattccc-aaataggtcaaccttttaaactgcc 119 |||||||||||||||| ||||||||||||||||| | |||||||||||||| ||||| | Sbjct: 71 ggagttgaaaataagcgtagatccggagattcccgatataggtcaacctttcgaactg-c 13 Query: 120 tgctgaatcc 129 |||||||||| Sbjct: 12 tgctgaatcc 3
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 165 bits (83), Expect = 2e-37 Identities = 123/135 (91%), Gaps = 1/135 (0%) Strand = Plus / Plus Query: 313 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 371 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 372 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 431 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 432 ggtgaccgatagcga 446 ||||||||||||||| Sbjct: 11972052 ggtgaccgatagcga 11972066
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 163 bits (82), Expect = 6e-37 Identities = 202/241 (83%), Gaps = 1/241 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||||||| || | |||| ||||||||| | | |||||| | ||| ||| Sbjct: 10 ggtggatacctaggcacctagag-acgaagaagggcgtcactaccgacgatacgctccgg 68 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| || || ||||| | ||||||||||||||| ||| || |||||| ||| ||| Sbjct: 69 ggagctggaagtaagcttcgatccggagattcccgaatggggcaacctcaaggactccct 128 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| ||||| |||| |||| || |||||||||||||||||||||| ||| Sbjct: 129 gctgaattcataggcagggtagaggaaacccggtgaactgaaacatcttagtagccggag 188 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 189 gaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaacgggaccagcctaaacc 248 Query: 241 g 241 | Sbjct: 249 g 249 Score = 127 bits (64), Expect = 3e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 420 taaatactcctgggtgaccgatagcgaa 447 || |||||||| |||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaa 463
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 161 bits (81), Expect = 2e-36 Identities = 183/217 (84%) Strand = Plus / Plus Query: 25 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 84 |||| ||||||||| | || |||||||| |||||| |||| || ||| ||||| ||| | Sbjct: 26 acgatgaagggcgtggaaaccgacgaaacgcttcgaggagctggaaacaagcaatgattc 85 Query: 85 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 144 |||||||||| |||||| |||||| || ||| ||| ||||| ||| ||| ||||| Sbjct: 86 ggagattcccgaatagggcaacctcttgtacttccttttgaattcatagaaaggaaagag 145 Query: 145 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 204 |||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 146 acaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattccc 205 Query: 205 gtagtagcggcgagcgaaatgggagcagcctaaaccg 241 |||||||||||||||||| ||||| ||| |||||||| Sbjct: 206 gtagtagcggcgagcgaactgggaacagtctaaaccg 242 Score = 111 bits (56), Expect = 2e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 490 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 549 Query: 420 taaatactcctgggtgaccgatag 443 |||||||| ||| |||||||||| Sbjct: 550 taaatacttttggatgaccgatag 573
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 161 bits (81), Expect = 2e-36 Identities = 111/120 (92%), Gaps = 1/120 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||| ||||||||| |||||||||||| || Sbjct: 24063480 ggtggatacctaggtacccagag-acgaggaaggacgtagcaagagacgaaatgctttgg 24063422 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 24063421 ggagttgaaaataatcatagatccggagattcccaaataggtcaacattttgaactgcct 24063362
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 161 bits (81), Expect = 2e-36 Identities = 111/120 (92%), Gaps = 1/120 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||| ||||||||| |||||||||||| || Sbjct: 23991686 ggtggatacctaggtacccagag-acgaggaaggacgtagcaagagacgaaatgctttgg 23991628 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 23991627 ggagttgaaaataatcatagatccggagattcccaaataggtcaacattttgaactgcct 23991568
>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 176388 Score = 161 bits (81), Expect = 2e-36 Identities = 111/120 (92%), Gaps = 1/120 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||| ||||||||| |||||||||||| || Sbjct: 23916 ggtggatacctaggtacccagag-acgaggaaggacgtagcaagagacgaaatgctttgg 23974 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 23975 ggagttgaaaataatcatagatccggagattcccaaataggtcaacattttgaactgcct 24034
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 159 bits (80), Expect = 9e-36 Identities = 179/212 (84%) Strand = Plus / Plus Query: 30 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 89 ||||||||||| | |||||| | ||||||||||| || || |||| | |||||| ||| Sbjct: 38 gaagggcgtagttaccgacgatacgcttcggggagctggaatcaagctttgatccgaaga 97 Query: 90 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 149 ||||| |||||| ||||||| || ||| |||| ||||| ||| |||| |||||||||| Sbjct: 98 ttcccgaatagggcaaccttatatacttcctgttgaattcatagacaggtaagagacaac 157 Query: 150 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 209 | |||||| |||||||||||||||||| | ||||||||||||||| ||||||||| |||| Sbjct: 158 ccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattcccttagt 217 Query: 210 agcggcgagcgaaatgggagcagcctaaaccg 241 || ||||||||||| |||| ||| |||||||| Sbjct: 218 agtggcgagcgaaaagggatcagtctaaaccg 249 Score = 111 bits (56), Expect = 2e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 420 taaatactcctgggtgaccgatag 443 |||||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatag 454
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 159 bits (80), Expect = 9e-36 Identities = 98/104 (94%) Strand = Plus / Plus Query: 138 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 197 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 198 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 241 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 143 bits (72), Expect = 6e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 359 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 418 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 419 ctaaatactcctgggtgaccgatagcgaagta 450 |||||||||||| | |||||||||| |||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagta 464 Score = 69.9 bits (35), Expect = 7e-09 Identities = 77/90 (85%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||||| | || | |||||||||||||| | | |||||||||||||||| Sbjct: 23 ggtggatacctaggcatctagag-acgaggaagggcgtggttaccgacgaaatgcttcgg 81 Query: 61 ggagttgaaaataagcatagatccggagat 90 ||||||| ||| | || |||||||||||| Sbjct: 82 ggagttggaaagaggctgagatccggagat 111
>gb|AF141147.1|AF141147 Vigna unguiculata clone VU53KNF3-1 16S ribosomal RNA gene, and 18S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 370 Score = 159 bits (80), Expect = 9e-36 Identities = 105/111 (94%), Gaps = 2/111 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 136 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 78 Query: 61 ggagttgaaaataagcatagatccggagattccc-aaataggtcaaccttt 110 |||||||||||||||| ||||||||||||||||| | |||||||||||||| Sbjct: 77 ggagttgaaaataagcgtagatccggagattcccgatataggtcaaccttt 27
>emb|X00012.1|CHSORN1 Spirodela oligorhiza chloroplast 5' end of gene for 23S rRNA Length = 200 Score = 157 bits (79), Expect = 4e-35 Identities = 97/102 (95%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 100 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgt 158 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggt 102 |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 159 ggagttgaaaataagcatagatccggagattcccgaataggt 200
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 155 bits (78), Expect = 1e-34 Identities = 166/190 (87%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| |||||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggcgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 153 bits (77), Expect = 6e-34 Identities = 116/129 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagta 450 || |||||| Sbjct: 444 agtgaagta 452
>dbj|AK111146.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-E08, full insert sequence Length = 953 Score = 155 bits (78), Expect = 1e-34 Identities = 78/78 (100%) Strand = Plus / Plus Query: 194 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 62 Query: 254 tgtgggagagcaatacaa 271 |||||||||||||||||| Sbjct: 63 tgtgggagagcaatacaa 80
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 155 bits (78), Expect = 1e-34 Identities = 90/94 (95%) Strand = Plus / Plus Query: 147 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 206 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| | Sbjct: 1911 aacctggcgaactgaaacatcttagtaaccagaggaaaataaagcaaaagcgattccctt 1970 Query: 207 agtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||| ||||||||||| Sbjct: 1971 agtagcggcgagcgaaatgggaacagcctaaacc 2004 Score = 111 bits (56), Expect = 2e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 2137 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 2196 Query: 420 taaatactcctgggtgaccgatag 443 |||||| ||||| |||||||||| Sbjct: 2197 taaatattcctgaatgaccgatag 2220
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 153 bits (77), Expect = 6e-34 Identities = 116/129 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagta 450 || |||||| Sbjct: 444 agtgaagta 452 Score = 153 bits (77), Expect = 6e-34 Identities = 200/235 (85%), Gaps = 5/235 (2%) Strand = Plus / Plus Query: 4 ggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgggga 63 |||||||||||||||||| | ||| ||||||| || || || ||||||||||||||| Sbjct: 24 ggatacctaggcacccagggt-cgaagaagggcataataattgatgaaatgcttcgggga 82 Query: 64 gttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgc 122 ||| |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| ||| Sbjct: 83 gttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgc 141 Query: 123 tgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagga 182 | | |||||| | || ||||||| |||| || ||||||||||||||||||| |||||||| Sbjct: 142 ttattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagagga 199 Query: 183 aaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 237 ||| |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 200 aaataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 153 bits (77), Expect = 6e-34 Identities = 116/129 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 442 agcgaagta 450 || |||||| Sbjct: 443 agtgaagta 451 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 153 bits (77), Expect = 6e-34 Identities = 116/129 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagta 450 || |||||| Sbjct: 444 agtgaagta 452 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 153 bits (77), Expect = 6e-34 Identities = 116/129 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagta 450 || |||||| Sbjct: 444 agtgaagta 452 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 153 bits (77), Expect = 6e-34 Identities = 116/129 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagta 450 || |||||| Sbjct: 444 agtgaagta 452 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 153 bits (77), Expect = 6e-34 Identities = 116/129 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagta 450 || |||||| Sbjct: 444 agtgaagta 452 Score = 147 bits (74), Expect = 4e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 ag 229 || Sbjct: 245 ag 246
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 153 bits (77), Expect = 6e-34 Identities = 116/129 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 442 agcgaagta 450 || |||||| Sbjct: 443 agtgaagta 451 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 153 bits (77), Expect = 6e-34 Identities = 116/129 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagta 450 || |||||| Sbjct: 444 agtgaagta 452 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 153 bits (77), Expect = 6e-34 Identities = 116/129 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagta 450 || |||||| Sbjct: 444 agtgaagta 452 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 153 bits (77), Expect = 6e-34 Identities = 116/129 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagta 450 || |||||| Sbjct: 444 agtgaagta 452 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 153 bits (77), Expect = 6e-34 Identities = 116/129 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagta 450 || |||||| Sbjct: 444 agtgaagta 452 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 153 bits (77), Expect = 6e-34 Identities = 116/129 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagta 450 || |||||| Sbjct: 444 agtgaagta 452 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 153 bits (77), Expect = 6e-34 Identities = 116/129 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagta 450 || |||||| Sbjct: 444 agtgaagta 452 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 153 bits (77), Expect = 6e-34 Identities = 116/129 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagta 450 || |||||| Sbjct: 444 agtgaagta 452 Score = 147 bits (74), Expect = 4e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|L49156.1|PDICPRGOL Pediastrum biradiatum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 4173 Score = 151 bits (76), Expect = 2e-33 Identities = 94/100 (94%) Strand = Plus / Plus Query: 141 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 200 ||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 147 agagaaaacctggtgaactgaaacatctcagtagccagaggaaaagaaagcaaaagcgat 206 Query: 201 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||||||||||||||||||||||| ||| ||||||||||| Sbjct: 207 tcccgtagtagcggcgagcgaaacggggccagcctaaacc 246 Score = 123 bits (62), Expect = 5e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 468 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 527 Query: 420 taaatactcctgggtgaccgatagcg 445 |||||||||||| | ||||||||||| Sbjct: 528 taaatactcctgagagaccgatagcg 553
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 151 bits (76), Expect = 2e-33 Identities = 166/196 (84%) Strand = Plus / Plus Query: 45 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 104 |||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggca 104 Query: 105 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 164 |||| |||| ||| | ||| ||| || |||||||||| |||| || |||||||||| Sbjct: 105 acctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaac 164 Query: 165 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 224 |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 165 atctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaa 224 Query: 225 gggagcagcctaaacc 240 |||| ||||||||||| Sbjct: 225 gggaacagcctaaacc 240 Score = 143 bits (72), Expect = 6e-31 Identities = 84/88 (95%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 420 taaatactcctgggtgaccgatagcgaa 447 |||||||||||||||||||||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaa 688
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 149 bits (75), Expect = 9e-33 Identities = 87/91 (95%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 420 taaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagta 648 Score = 131 bits (66), Expect = 2e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 159 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 218 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 219 cgaaatgggagcagcctaaacc 240 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 147 bits (74), Expect = 4e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 ag 229 || Sbjct: 245 ag 246 Score = 145 bits (73), Expect = 1e-31 Identities = 115/129 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagta 450 || |||||| Sbjct: 444 agtgaagta 452
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 147 bits (74), Expect = 4e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 140 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 199 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 200 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 241 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 119 bits (60), Expect = 8e-24 Identities = 78/84 (92%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 420 taaatactcctgggtgaccgatag 443 |||||||||||||||||||||||| Sbjct: 587 taaatactcctgggtgaccgatag 610 Score = 61.9 bits (31), Expect = 2e-06 Identities = 89/108 (82%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 || ||| |||||||||||||| | |||| ||||||||| | || |||||||| ||||||| Sbjct: 10 ggyggagacctaggcacccagag-acgaagaagggcgtggaaaccgacgaaacgcttcgg 68 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 108 | || || ||| |||| |||||| |||||||| |||||| |||||| Sbjct: 69 gaagctggaaacaagctatgatccgaagattcccgaatagggcaacct 116
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 145 bits (73), Expect = 1e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 140 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 199 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 200 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 145 bits (73), Expect = 1e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 140 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 199 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 200 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 129 bits (65), Expect = 8e-27 Identities = 83/89 (93%) Strand = Plus / Minus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 420 taaatactcctgggtgaccgatagcgaag 448 |||||||||||| ||||||||||| |||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaag 155745 Score = 129 bits (65), Expect = 8e-27 Identities = 83/89 (93%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 420 taaatactcctgggtgaccgatagcgaag 448 |||||||||||| ||||||||||| |||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaag 78147 Score = 46.1 bits (23), Expect = 0.098 Identities = 92/114 (80%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 156279 ggtggagacctaggcactcagag-acgatgaagggcgcagataccggcgatacgcttcgg 156221 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 114 |||| || || |||||| |||||| |||| ||| |||||| |||||| ||||| Sbjct: 156220 ggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaaa 156167 Score = 46.1 bits (23), Expect = 0.098 Identities = 92/114 (80%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 77613 ggtggagacctaggcactcagag-acgatgaagggcgcagataccggcgatacgcttcgg 77671 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 114 |||| || || |||||| |||||| |||| ||| |||||| |||||| ||||| Sbjct: 77672 ggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaaa 77725
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 145 bits (73), Expect = 1e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 136 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 195 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 196 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 143 bits (72), Expect = 6e-31 Identities = 84/88 (95%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 420 taaatactcctgggtgaccgatagcgaa 447 |||||||||||||||||||||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaa 778
>gb|AF141154.1|AF141154 Vigna unguiculata clone VU124NBS4 ribosomal RNA operon, partial sequence Length = 370 Score = 145 bits (73), Expect = 1e-31 Identities = 120/132 (90%), Gaps = 3/132 (2%) Strand = Plus / Plus Query: 5 gatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 64 ||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||| Sbjct: 240 gatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggag 298 Query: 65 ttgaaaataagcatagatccggagattccc-aaataggtcaaccttttaaactgcctgct 123 |||||||| ||| ||||||||||||||||| | |||||||||||||| ||||| ||||| Sbjct: 299 ttgaaaatcagcgtagatccggagattcccgatataggtcaacctttcgaactg-ctgct 357 Query: 124 gaatccatgagc 135 ||| ||| |||| Sbjct: 358 gaacccacgagc 369
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 145 bits (73), Expect = 1e-31 Identities = 88/93 (94%) Strand = Plus / Plus Query: 147 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 206 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 188152 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 188211 Query: 207 agtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||| |||| |||||||||| Sbjct: 188212 agtagcggcgagcgaagcgggaacagcctaaac 188244 Score = 145 bits (73), Expect = 1e-31 Identities = 88/93 (94%) Strand = Plus / Plus Query: 147 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 206 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 149709 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 149768 Query: 207 agtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||| |||| |||||||||| Sbjct: 149769 agtagcggcgagcgaagcgggaacagcctaaac 149801 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 364 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 423 ||||||| |||||||||| |||||||||||||||||| |||||||||| ||||||||||| Sbjct: 188383 agtagcacggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgcaaggctaaa 188442 Query: 424 tactcctgggtgaccgatag 443 || | ||| |||||||||| Sbjct: 188443 tattactgaatgaccgatag 188462 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 364 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 423 ||||||| |||||||||| |||||||||||||||||| |||||||||| | ||||||||| Sbjct: 149940 agtagcacggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaa 149999 Query: 424 tactcctgggtgaccgatag 443 || | ||| |||||||||| Sbjct: 150000 tattactgaatgaccgatag 150019 Score = 46.1 bits (23), Expect = 0.098 Identities = 50/59 (84%) Strand = Plus / Plus Query: 30 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggag 88 ||||||||| || | |||||||| ||| ||||||| || || ||||| ||||||||||| Sbjct: 188035 gaagggcgtggctaccgacgaaacgctccggggagctggaagtaagcttagatccggag 188093 Score = 46.1 bits (23), Expect = 0.098 Identities = 50/59 (84%) Strand = Plus / Plus Query: 30 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggag 88 ||||||||| || | |||||||| ||| ||||||| || || ||||| ||||||||||| Sbjct: 149592 gaagggcgtggctaccgacgaaacgctccggggagctggaagtaagcttagatccggag 149650
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 145 bits (73), Expect = 1e-31 Identities = 88/93 (94%) Strand = Plus / Plus Query: 147 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 206 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 189075 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 189134 Query: 207 agtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||| |||| |||||||||| Sbjct: 189135 agtagcggcgagcgaagcgggaacagcctaaac 189167 Score = 145 bits (73), Expect = 1e-31 Identities = 88/93 (94%) Strand = Plus / Plus Query: 147 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 206 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 150502 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 150561 Query: 207 agtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||| |||| |||||||||| Sbjct: 150562 agtagcggcgagcgaagcgggaacagcctaaac 150594 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 364 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 423 |||||||||||||||||| |||||||||||||||||| |||||||||| | ||||||||| Sbjct: 189306 agtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaa 189365 Query: 424 tactcctgggtgaccgatag 443 || | ||| |||||||||| Sbjct: 189366 tattactgaatgaccgatag 189385 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 364 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 423 |||||||||||||||||| |||||||||||||||||| |||||||||| | ||||||||| Sbjct: 150733 agtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaa 150792 Query: 424 tactcctgggtgaccgatag 443 || | ||| |||||||||| Sbjct: 150793 tattactgaatgaccgatag 150812 Score = 46.1 bits (23), Expect = 0.098 Identities = 50/59 (84%) Strand = Plus / Plus Query: 30 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggag 88 ||||||||| || | |||||||| ||| ||||||| || || ||||| ||||||||||| Sbjct: 188958 gaagggcgtggctaccgacgaaacgctccggggagctggaagtaagcttagatccggag 189016 Score = 46.1 bits (23), Expect = 0.098 Identities = 50/59 (84%) Strand = Plus / Plus Query: 30 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggag 88 ||||||||| || | |||||||| ||| ||||||| || || ||||| ||||||||||| Sbjct: 150385 gaagggcgtggctaccgacgaaacgctccggggagctggaagtaagcttagatccggag 150443
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 143 bits (72), Expect = 6e-31 Identities = 81/84 (96%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 509 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 568 Query: 420 taaatactcctgggtgaccgatag 443 |||||||||||||||||||||||| Sbjct: 569 taaatactcctgggtgaccgatag 592 Score = 127 bits (64), Expect = 3e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 141 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 200 |||||||||| || ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 159 agagacaacccggtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 218 Query: 201 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 258
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 143 bits (72), Expect = 6e-31 Identities = 84/88 (95%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 420 taaatactcctgggtgaccgatagcgaa 447 |||||||||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaa 496 Score = 123 bits (62), Expect = 5e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 159 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 218 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 219 cgaaatgggagcagcctaaacc 240 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 46.1 bits (23), Expect = 0.098 Identities = 87/108 (80%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 || ||| |||||||||||||| | |||| |||||||| || | || ||||| ||||||| Sbjct: 3 ggyggagacctaggcacccagag-acgatgaagggcgcagataccggcgaaacgcttcgg 61 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 108 |||| || || |||| | |||||| |||| ||| |||||| |||||| Sbjct: 62 ggagctggcaacaagctttgatccgaagatccccgaatagggcaacct 109
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 143 bits (72), Expect = 6e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 147 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 206 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 148 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaacgcgattccctt 207 Query: 207 agtagcggcgagcgaaatgggagcagcctaaa 238 ||||||||||||||||| |||| ||||||||| Sbjct: 208 agtagcggcgagcgaaacgggaacagcctaaa 239 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||| |||| |||||| ||||||| |||||||||| |||||||||| | ||||| Sbjct: 369 cccgagtagcctgggacacgtgaaatcccgggtgaatcagcgaggaccacctcgtaaggc 428 Query: 420 taaatactcctgggtgaccgatag 443 ||||||||||| ||||||||||| Sbjct: 429 taaatactcctaagtgaccgatag 452 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 30 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 89 ||||||||| | || | |||||||||||||||||| || ||| |||| |||||||||| Sbjct: 31 gaagggcgtggaaaccaacgaaatgcttcggggagctggaaacaagctacgatccggaga 90 Query: 90 ttcccaaataggtcaacc 107 ||||| ||| || ||||| Sbjct: 91 ttcccgaatggggcaacc 108
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 143 bits (72), Expect = 6e-31 Identities = 84/88 (95%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 420 taaatactcctgggtgaccgatagcgaa 447 |||||||||||| ||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaa 458 Score = 109 bits (55), Expect = 8e-21 Identities = 76/83 (91%) Strand = Plus / Plus Query: 140 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 199 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 200 ttcccgtagtagcggcgagcgaa 222 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>gb|AY690322.1| Citrus meyeri tRNA-Ala (trnA) gene, complete sequence; and tRNA-Ile (trnI) gene, partial sequence; chloroplast Length = 1322 Score = 143 bits (72), Expect = 6e-31 Identities = 87/91 (95%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 90 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 32 Query: 61 ggagttgaaaataagcatagatccggagatt 91 |||||||||||||||| |||||||||||||| Sbjct: 31 ggagttgaaaataagcgtagatccggagatt 1
>gb|AY690321.1| Citrus reticulata tRNA-tRNA (trnA) gene, complete sequence; and tRNA-Ile (trnI) gene, partial sequence; chloroplast Length = 1322 Score = 143 bits (72), Expect = 6e-31 Identities = 87/91 (95%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 90 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 32 Query: 61 ggagttgaaaataagcatagatccggagatt 91 |||||||||||||||| |||||||||||||| Sbjct: 31 ggagttgaaaataagcgtagatccggagatt 1
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 143 bits (72), Expect = 6e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 147 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 206 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 2029 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaacgcgattccctt 2088 Query: 207 agtagcggcgagcgaaatgggagcagcctaaa 238 ||||||||||||||||| |||| ||||||||| Sbjct: 2089 agtagcggcgagcgaaacgggaacagcctaaa 2120 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||| |||| |||||| ||||||| |||||||||| |||||||||| | ||||| Sbjct: 2250 cccgagtagcctgggacacgtgaaatcccgggtgaatcagcgaggaccacctcgtaaggc 2309 Query: 420 taaatactcctgggtgaccgatag 443 ||||||||||| ||||||||||| Sbjct: 2310 taaatactcctaagtgaccgatag 2333 Score = 58.0 bits (29), Expect = 3e-05 Identities = 88/107 (82%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||| || | ||| ||||||||| | || | |||||||||||||| Sbjct: 1884 ggtggatacctaggcacttagagt-cgatgaagggcgtggaaaccaacgaaatgcttcgg 1942 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacc 107 |||| || ||| |||| ||||||||||||||| ||| || ||||| Sbjct: 1943 ggagctggaaacaagctacgatccggagattcccgaatggggcaacc 1989
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 143 bits (72), Expect = 6e-31 Identities = 81/84 (96%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 509 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 568 Query: 420 taaatactcctgggtgaccgatag 443 |||||||||||||||||||||||| Sbjct: 569 taaatactcctgggtgaccgatag 592 Score = 127 bits (64), Expect = 3e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 141 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 200 |||||||||| || ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 159 agagacaacccggtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 218 Query: 201 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 258
>gb|AY155547.1| Cyanothece sp. PCC 8801 23S ribosomal RNA gene, partial sequence Length = 732 Score = 141 bits (71), Expect = 2e-30 Identities = 89/95 (93%) Strand = Plus / Plus Query: 146 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 205 ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 167 caaccgggcgaactgaaacatcttagtagcccgaggaaaagaaagcaaaagcgattcccc 226 Query: 206 tagtagcggcgagcgaaatgggagcagcctaaacc 240 ||||||||||||||||| |||| ||||||||||| Sbjct: 227 cagtagcggcgagcgaaaagggaacagcctaaacc 261 Score = 103 bits (52), Expect = 5e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||| ||||||||||||||||||||||||||||| | |||||| | | ||||| Sbjct: 387 cccgagtagcacggggcacgtggaatcccgtgtgaatcagcgaagaccacttcgtaaggc 446 Query: 420 taaatactcctgggtgaccgatag 443 |||||||||||| || |||||||| Sbjct: 447 taaatactcctgtgtaaccgatag 470
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 139 bits (70), Expect = 9e-30 Identities = 88/94 (93%) Strand = Plus / Plus Query: 147 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 206 ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1692 aacctggtgaactgaaacatcttagtagccagaggaaaagaaagcaacagcgattccccc 1751 Query: 207 agtagcggcgagcgaaatgggagcagcctaaacc 240 ||||||||||||||||| |||| ||||||||||| Sbjct: 1752 agtagcggcgagcgaaaagggaacagcctaaacc 1785 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatc 397 |||||||||||||||||||||| |||||||||| |||| Sbjct: 1912 cccgagtagcatggggcacgtgaaatcccgtgtaaatc 1949
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 139 bits (70), Expect = 9e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 140 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 199 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 200 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 241 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242 Score = 135 bits (68), Expect = 1e-28 Identities = 83/88 (94%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 420 taaatactcctgggtgaccgatagcgaa 447 |||||||||||||||||||||||||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaa 529
>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CpaI, site-specific DNA endonuclease I-CpaIII, site-specific DNA endonuclease I-CpaIV, site-specific DNA endonuclease I-CpaV genes Length = 8217 Score = 139 bits (70), Expect = 9e-30 Identities = 193/233 (82%), Gaps = 1/233 (0%) Strand = Plus / Plus Query: 8 acctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttg 67 |||||||||| ||| | |||| |||||||| || | || ||||| ||||||||||| || Sbjct: 28 acctaggcactcagag-acgatgaagggcgcagataccggcgaaacgcttcggggagctg 86 Query: 68 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 127 || |||| | |||||| |||||||| |||||| |||||| ||||||| ||| ||| Sbjct: 87 gcaacaagctttgatccgaagattcccgaatagggcaacctattaaacttcctatacaat 146 Query: 128 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 187 ||| ||| |||||| |||| | |||||||||||||| |||||| |||||||||| Sbjct: 147 tcatatttaggaaagagagaacccagtgaactgaaacatctaagtagctggaggaaaaga 206 Query: 188 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 207 aagcaaaagcgattcccgtagtagcggcgagcgaactgggatcagcctaaacc 259 Score = 119 bits (60), Expect = 8e-24 Identities = 81/88 (92%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 517 cccgagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 576 Query: 420 taaatactcctgggtgaccgatagcgaa 447 |||||||||||| ||||||||||||||| Sbjct: 577 taaatactcctgagtgaccgatagcgaa 604
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 139 bits (70), Expect = 9e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 140 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 199 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 200 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 241 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241 Score = 119 bits (60), Expect = 8e-24 Identities = 81/88 (92%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 420 taaatactcctgggtgaccgatagcgaa 447 |||||||| ||| ||||||||||||||| Sbjct: 566 taaatactactgagtgaccgatagcgaa 593
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 139 bits (70), Expect = 9e-30 Identities = 88/94 (93%) Strand = Plus / Plus Query: 147 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 206 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 207 agtagcggcgagcgaaatgggagcagcctaaacc 240 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 113 bits (57), Expect = 5e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 354 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 413 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 414 caaggctaaatactcctgggtgaccgatagcgaagta 450 ||||||||||||||||||||||||||||| |||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagta 434 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 25 acgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||| ||||||||||| ||||||||||| ||||||| Sbjct: 7 acgaagaagggcgtagtaagcgacgaaacgcttcgg 42
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 139 bits (70), Expect = 9e-30 Identities = 88/94 (93%) Strand = Plus / Minus Query: 147 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 206 |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 2334657 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagaaaactcgattccctt 2334598 Query: 207 agtagcggcgagcgaaatgggagcagcctaaacc 240 ||||||||||||||||| |||| ||||||||||| Sbjct: 2334597 agtagcggcgagcgaaaggggaacagcctaaacc 2334564 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 375 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 434 ||||||||||| ||| |||||| || |||||||||| | ||||||||||||||||| || Sbjct: 2334423 gcacgtggaattccggatgaatctgcgaggaccacctcgtaaggctaaatactcctgtgt 2334364 Query: 435 gaccgatagcg 445 ||||||||||| Sbjct: 2334363 gaccgatagcg 2334353
>emb|X68899.1|CHCPRRNX1 Chloroplast Chlamydomonas pallidostigmatica rrnL gene, exon 1 Length = 2219 Score = 139 bits (70), Expect = 9e-30 Identities = 193/233 (82%), Gaps = 1/233 (0%) Strand = Plus / Plus Query: 8 acctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttg 67 |||||||||| ||| | |||| |||||||| || | || ||||| ||||||||||| || Sbjct: 28 acctaggcactcagag-acgatgaagggcgcagataccggcgaaacgcttcggggagctg 86 Query: 68 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 127 || |||| | |||||| |||||||| |||||| |||||| ||||||| ||| ||| Sbjct: 87 gcaacaagctttgatccgaagattcccgaatagggcaacctattaaacttcctatacaat 146 Query: 128 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 187 ||| ||| |||||| |||| | |||||||||||||| |||||| |||||||||| Sbjct: 147 tcatatttaggaaagagagaacccagtgaactgaaacatctaagtagctggaggaaaaga 206 Query: 188 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 207 aagcaaaagcgattcccgtagtagcggcgagcgaactgggatcagcctaaacc 259 Score = 119 bits (60), Expect = 8e-24 Identities = 81/88 (92%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 517 cccgagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 576 Query: 420 taaatactcctgggtgaccgatagcgaa 447 |||||||||||| ||||||||||||||| Sbjct: 577 taaatactcctgagtgaccgatagcgaa 604
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 139 bits (70), Expect = 9e-30 Identities = 88/94 (93%) Strand = Plus / Plus Query: 147 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 206 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | | Sbjct: 1718 aacctagcgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattctctt 1777 Query: 207 agtagcggcgagcgaaatgggagcagcctaaacc 240 ||||||||||||||||| |||| ||||||||||| Sbjct: 1778 agtagcggcgagcgaaaagggaacagcctaaacc 1811 Score = 63.9 bits (32), Expect = 4e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||| ||||| |||||| || ||||| ||||||||| |||||||||| | ||||| Sbjct: 1937 cccgagtaatatgggacacgtgaaaccccgtatgaatcagcgaggaccacctcgtaaggc 1996 Query: 420 taaatactcctgggtgaccgatag 443 |||||| |||| | | |||||||| Sbjct: 1997 taaatattcctagataaccgatag 2020
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 137 bits (69), Expect = 3e-29 Identities = 201/242 (83%), Gaps = 3/242 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 || ||| |||||||||| ||| | |||| ||||||||| | || |||||||| ||||||| Sbjct: 10 ggyggagacctaggcactcagag-acgatgaagggcgtggtaaccgacgaaacgcttcgg 68 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| || | | ||| | |||||| |||||||| |||||| |||||| || ||| | | Sbjct: 69 ggagctggatacgagctttgatccgaagattcccgaatagggcaacctcttggactcctt 128 Query: 121 gctgaatccatgagc-aggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 ||||| ||| ||| | | |||||| |||| || ||| ||||||||||||||| || || Sbjct: 129 agtgaattcat-agctaagaaagagataacccggtgaattgaaacatcttagtaaccgga 187 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 188 ggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaatgggaacagcctaaac 247 Query: 240 cg 241 || Sbjct: 248 cg 249 Score = 127 bits (64), Expect = 3e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 420 taaatactcctgggtgaccgatagcgaa 447 |||||||||||| ||||||||||||||| Sbjct: 506 taaatactcctgagtgaccgatagcgaa 533
>gb|AY389861.1| Uncultured chlorophyte large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 750 Score = 135 bits (68), Expect = 1e-28 Identities = 80/84 (95%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 4 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 63 Query: 420 taaatactcctgggtgaccgatag 443 |||||||||||||||||||||||| Sbjct: 64 taaatactcctgggtgaccgatag 87
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 135 bits (68), Expect = 1e-28 Identities = 83/88 (94%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 420 taaatactcctgggtgaccgatagcgaa 447 |||||||||||| ||||||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaa 497 Score = 95.6 bits (48), Expect = 1e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 140 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 199 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 200 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>gb|L43540.1|DUNCPRRNL Dunaliella parva Length = 5685 Score = 135 bits (68), Expect = 1e-28 Identities = 80/84 (95%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 406 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 465 Query: 420 taaatactcctgggtgaccgatag 443 |||||||||||||||||||||||| Sbjct: 466 taaatactcctgggtgaccgatag 489 Score = 125 bits (63), Expect = 1e-25 Identities = 196/240 (81%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 || ||| |||||||||||||| | |||| |||||||| || | || ||||| ||| ||| Sbjct: 3 ggyggagacctaggcacccagag-acgaagaagggcgcagataccggcgaaacgctccgg 61 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||| || || | | ||||||||||| ||| |||||| |||||| | |||| || Sbjct: 62 ggagttggcaacaaactttgatccggagatccccgaatagggcaacctgtacaacttcca 121 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 | |||| ||| || || ||||| ||||| | ||| ||||||||||||||||| ||| Sbjct: 122 acagaattcataagttggaaagaggcaacccagtgaattgaaacatcttagtagctggag 181 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 182 gaaaagaaagcaaacgcgattcccgtagtagcggcgagcgaaccgggaacagcctaaacc 241
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 135 bits (68), Expect = 1e-28 Identities = 83/88 (94%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 420 taaatactcctgggtgaccgatagcgaa 447 |||||||||||| ||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaa 481 Score = 113 bits (57), Expect = 5e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 155 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 214 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 215 cgagcgaaatgggagcagcctaaac 239 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 50.1 bits (25), Expect = 0.006 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 21 ggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcgg 79 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 108 |||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 80 ggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 135 bits (68), Expect = 1e-28 Identities = 83/88 (94%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 420 taaatactcctgggtgaccgatagcgaa 447 |||||||||||| ||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaa 538 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 155 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 214 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 215 cgagcgaaatgggagcagcctaaacc 240 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 50.1 bits (25), Expect = 0.006 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 21 ggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcgg 79 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 108 |||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 80 ggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>gb|L43353.1|CRECPRRNLD Chlamydomonas geitleri chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4406 Score = 135 bits (68), Expect = 1e-28 Identities = 80/84 (95%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 380 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 439 Query: 420 taaatactcctgggtgaccgatag 443 |||||||||||||||||||||||| Sbjct: 440 taaatactcctgggtgaccgatag 463 Score = 119 bits (60), Expect = 8e-24 Identities = 90/100 (90%) Strand = Plus / Plus Query: 141 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 200 |||||||||| || ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 159 agagacaacccggtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 218 Query: 201 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||| |||| |||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaaccgggattagcctaaacc 258
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 135 bits (68), Expect = 1e-28 Identities = 80/84 (95%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 420 taaatactcctgggtgaccgatag 443 |||||||||||| ||||||||||| Sbjct: 472 taaatactcctgagtgaccgatag 495 Score = 123 bits (62), Expect = 5e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 159 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 218 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 219 cgaaatgggagcagcctaaacc 240 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240
>gb|L44123.1|CMJCPRGOL Chlorococcum echinozygotum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CecI gene Length = 7283 Score = 135 bits (68), Expect = 1e-28 Identities = 80/84 (95%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 635 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 694 Query: 420 taaatactcctgggtgaccgatag 443 |||||||||||||||||||||||| Sbjct: 695 taaatactcctgggtgaccgatag 718 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 141 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 200 |||||||||| | ||| ||||||||||||||| | | ||||||||||||||| ||||| Sbjct: 141 agagacaacccagtgaattgaaacatcttagtaactggcggaaaagaaagcaaacgcgat 200 Query: 201 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 201 tcccgtagtagcggcgagcgaaccgggaacagcctaaacc 240
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 135 bits (68), Expect = 1e-28 Identities = 83/88 (94%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| ||||||||||||||| || |||||||||||| ||||| Sbjct: 379 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccaccttgtaaggc 438 Query: 420 taaatactcctgggtgaccgatagcgaa 447 ||||||||||| |||||||||||||||| Sbjct: 439 taaatactcctaggtgaccgatagcgaa 466 Score = 89.7 bits (45), Expect = 7e-15 Identities = 87/101 (86%) Strand = Plus / Plus Query: 140 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 199 |||||| ||||| | ||| ||||||||||||||||| ||||||||||| |||||| |||| Sbjct: 147 aagagataacctagtgaattgaaacatcttagtagctagaggaaaagagagcaaacgcga 206 Query: 200 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 || || ||||||||||||||||| || | |||||||||| Sbjct: 207 tttcctgagtagcggcgagcgaaacggaacgagcctaaacc 247
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 135 bits (68), Expect = 1e-28 Identities = 80/84 (95%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 420 taaatactcctgggtgaccgatag 443 |||||||||||||||||||||||| Sbjct: 627 taaatactcctgggtgaccgatag 650 Score = 119 bits (60), Expect = 8e-24 Identities = 90/100 (90%) Strand = Plus / Plus Query: 141 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 200 |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 199 Query: 201 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 200 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 135 bits (68), Expect = 1e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 146 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 205 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 206 tagtagcggcgagcgaaatgggagcagcctaaaccg 241 |||||||||||||||| |||| |||||||||||| Sbjct: 210 cagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 129 bits (65), Expect = 8e-27 Identities = 83/89 (93%) Strand = Plus / Plus Query: 359 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 418 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 365 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 424 Query: 419 ctaaatactcctgggtgaccgatagcgaa 447 |||||||||||||| |||||||||||||| Sbjct: 425 ctaaatactcctggatgaccgatagcgaa 453 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 282 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 331 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 287 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 336
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 135 bits (68), Expect = 1e-28 Identities = 83/88 (94%) Strand = Plus / Minus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 420 taaatactcctgggtgaccgatagcgaa 447 |||||||||||| ||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaa 151903 Score = 135 bits (68), Expect = 1e-28 Identities = 83/88 (94%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 420 taaatactcctgggtgaccgatagcgaa 447 |||||||||||| ||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaa 42300 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 155 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 214 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 215 cgagcgaaatgggagcagcctaaacc 240 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 155 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 214 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 215 cgagcgaaatgggagcagcctaaacc 240 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 42.1 bits (21), Expect = 1.5 Identities = 87/108 (80%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 152360 ggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcgg 152302 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 108 |||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 152301 ggagctggcaacaagctttgatccgaagattcccgaatagggcaacct 152254 Score = 42.1 bits (21), Expect = 1.5 Identities = 87/108 (80%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 41843 ggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcgg 41901 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 108 |||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 41902 ggagctggcaacaagctttgatccgaagattcccgaatagggcaacct 41949
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 135 bits (68), Expect = 1e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 146 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 205 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 163 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 222 Query: 206 tagtagcggcgagcgaaatgggagcagcctaaaccg 241 |||||||||||||||| |||| |||||||||||| Sbjct: 223 cagtagcggcgagcgaagagggaacagcctaaaccg 258 Score = 129 bits (65), Expect = 8e-27 Identities = 83/89 (93%) Strand = Plus / Plus Query: 359 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 418 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 437 Query: 419 ctaaatactcctgggtgaccgatagcgaa 447 |||||||||||||| |||||||||||||| Sbjct: 438 ctaaatactcctggatgaccgatagcgaa 466 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 282 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 331 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 300 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 349
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 135 bits (68), Expect = 1e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 146 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 205 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 4737 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 4796 Query: 206 tagtagcggcgagcgaaatgggagcagcctaaaccg 241 |||||||||||||||| |||| |||||||||||| Sbjct: 4797 cagtagcggcgagcgaagagggaacagcctaaaccg 4832 Score = 129 bits (65), Expect = 8e-27 Identities = 83/89 (93%) Strand = Plus / Plus Query: 359 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 418 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 4952 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 5011 Query: 419 ctaaatactcctgggtgaccgatagcgaa 447 |||||||||||||| |||||||||||||| Sbjct: 5012 ctaaatactcctggatgaccgatagcgaa 5040 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 282 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 331 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 4874 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 4923
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 135 bits (68), Expect = 1e-28 Identities = 68/68 (100%) Strand = Plus / Plus Query: 383 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 443 gcgaagta 450 |||||||| Sbjct: 61 gcgaagta 68
>emb|X68893.1|CHCIRRNX1 Chloroplast Chlamydomonas indica rrnL gene, exon 1 Length = 810 Score = 135 bits (68), Expect = 1e-28 Identities = 80/84 (95%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 447 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 506 Query: 420 taaatactcctgggtgaccgatag 443 |||||||||||||||||||||||| Sbjct: 507 taaatactcctgggtgaccgatag 530 Score = 111 bits (56), Expect = 2e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 141 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 200 |||||||||| | ||| ||||||||||||||| | | ||||||||||||||||||||| Sbjct: 159 agagacaacccagtgaattgaaacatcttagtaactggcggaaaagaaagcaaaagcgat 218 Query: 201 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaaccgggaacagcctaaacc 258
>emb|X68891.1|CHCGRRNL1 Chloroplast Chlamydomonas geitleri rrnL gene, exon 1 Length = 1964 Score = 135 bits (68), Expect = 1e-28 Identities = 80/84 (95%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 380 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 439 Query: 420 taaatactcctgggtgaccgatag 443 |||||||||||||||||||||||| Sbjct: 440 taaatactcctgggtgaccgatag 463 Score = 119 bits (60), Expect = 8e-24 Identities = 90/100 (90%) Strand = Plus / Plus Query: 141 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 200 |||||||||| || ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 159 agagacaacccggtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 218 Query: 201 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||| |||| |||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaaccgggattagcctaaacc 258
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 135 bits (68), Expect = 1e-28 Identities = 83/88 (94%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 420 taaatactcctgggtgaccgatagcgaa 447 |||||||||||| ||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaa 538 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 155 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 214 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 215 cgagcgaaatgggagcagcctaaacc 240 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 50.1 bits (25), Expect = 0.006 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 21 ggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcgg 79 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 108 |||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 80 ggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,963,651 Number of Sequences: 3902068 Number of extensions: 2963651 Number of successful extensions: 73654 Number of sequences better than 10.0: 4769 Number of HSP's better than 10.0 without gapping: 4684 Number of HSP's successfully gapped in prelim test: 108 Number of HSP's that attempted gapping in prelim test: 60874 Number of HSP's gapped (non-prelim): 11951 length of query: 450 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 428 effective length of database: 17,147,199,772 effective search space: 7339001502416 effective search space used: 7339001502416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)