ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26o06 |
|---|---|
| Clone Library Name | barley_pub |
>PSD12_PONPY (Q5RBI3) 26S proteasome non-ATPase regulatory subunit 12 (26S| proteasome regulatory subunit p55) Length = 455 Score = 178 bits (452), Expect = 1e-44 Identities = 89/178 (50%), Positives = 124/178 (69%) Frame = +2 Query: 116 LDAAIESLLNTEKQCRLAGDVAGTRKAAVDIVELCFKDGAWKALNDQIVVLSKRRGQLKQ 295 L IE+LL+ EKQ R A D+ T + V +V++C++ W LN+ I++LSKRR QLKQ Sbjct: 39 LQEVIETLLSLEKQTRTASDMVSTSRILVAVVKMCYEAKEWDLLNENIMLLSKRRSQLKQ 98 Query: 296 AITAVVQKAMEYIDVAPDVETRIELIKTLSSVAAGKIYVEIERARLIKRLAKIKEEQGKI 475 A+ +VQ+ Y++ D+ ++ LI TL V GKIYVEIERARL K LA IKE+ G + Sbjct: 99 AVAKMVQQCCTYVEEITDLPIKLRLIDTLRMVTEGKIYVEIERARLTKTLATIKEQNGDV 158 Query: 476 DEAAEIMQEVAVETFGSMAKTEKLAFILEQVRLCLDRQDYVRAQILSRKISPRVFDAD 649 EAA I+QE+ VET+GSM K E++ FILEQ+RLCL +DY+R QI+S+KI+ + F + Sbjct: 159 KEAASILQELQVETYGSMEKKERVEFILEQMRLCLAVKDYIRTQIISKKINTKFFQEE 216
>PSD12_HUMAN (O00232) 26S proteasome non-ATPase regulatory subunit 12 (26S| proteasome regulatory subunit p55) Length = 455 Score = 178 bits (452), Expect = 1e-44 Identities = 89/178 (50%), Positives = 124/178 (69%) Frame = +2 Query: 116 LDAAIESLLNTEKQCRLAGDVAGTRKAAVDIVELCFKDGAWKALNDQIVVLSKRRGQLKQ 295 L IE+LL+ EKQ R A D+ T + V +V++C++ W LN+ I++LSKRR QLKQ Sbjct: 39 LQEVIETLLSLEKQTRTASDMVSTSRILVAVVKMCYEAKEWDLLNENIMLLSKRRSQLKQ 98 Query: 296 AITAVVQKAMEYIDVAPDVETRIELIKTLSSVAAGKIYVEIERARLIKRLAKIKEEQGKI 475 A+ +VQ+ Y++ D+ ++ LI TL V GKIYVEIERARL K LA IKE+ G + Sbjct: 99 AVAKMVQQCCTYVEEITDLPIKLRLIDTLRMVTEGKIYVEIERARLTKTLATIKEQNGDV 158 Query: 476 DEAAEIMQEVAVETFGSMAKTEKLAFILEQVRLCLDRQDYVRAQILSRKISPRVFDAD 649 EAA I+QE+ VET+GSM K E++ FILEQ+RLCL +DY+R QI+S+KI+ + F + Sbjct: 159 KEAASILQELQVETYGSMEKKERVEFILEQMRLCLAVKDYIRTQIISKKINTKFFQEE 216
>PSD12_MOUSE (Q9D8W5) 26S proteasome non-ATPase regulatory subunit 12 (26S| proteasome regulatory subunit p55) Length = 455 Score = 174 bits (440), Expect = 3e-43 Identities = 87/173 (50%), Positives = 121/173 (69%) Frame = +2 Query: 116 LDAAIESLLNTEKQCRLAGDVAGTRKAAVDIVELCFKDGAWKALNDQIVVLSKRRGQLKQ 295 L IE+LL+ EKQ R A D+ T + V +V++C++ W N+ I++LSKRR QLKQ Sbjct: 39 LQEVIETLLSLEKQTRTASDMVSTSRILVAVVKMCYEAKEWDLHNENIMLLSKRRSQLKQ 98 Query: 296 AITAVVQKAMEYIDVAPDVETRIELIKTLSSVAAGKIYVEIERARLIKRLAKIKEEQGKI 475 A+ +VQ+ Y++ D+ ++ LI TL V GKIYVEIERARL K LA IKE+ G + Sbjct: 99 AVAKMVQQCCTYVEEITDLPVKLRLIDTLRMVTEGKIYVEIERARLTKTLATIKEQNGDV 158 Query: 476 DEAAEIMQEVAVETFGSMAKTEKLAFILEQVRLCLDRQDYVRAQILSRKISPR 634 EAA I+QE+ VET+GSM K E++ FILEQ+RLCL +DY+R QI+S+KI+ + Sbjct: 159 KEAASILQELQVETYGSMEKKERVEFILEQMRLCLAVKDYIRTQIISKKINTK 211
>RPN5_SCHPO (Q9UTM3) 26S proteasome regulatory subunit rpn5| Length = 443 Score = 157 bits (396), Expect = 3e-38 Identities = 84/178 (47%), Positives = 120/178 (67%) Frame = +2 Query: 116 LDAAIESLLNTEKQCRLAGDVAGTRKAAVDIVELCFKDGAWKALNDQIVVLSKRRGQLKQ 295 +DA +E LL EKQ R A D + K + I +L F+ G ++ LN+Q+V L K+ GQLKQ Sbjct: 28 IDANLEKLLIFEKQVRQASDTSTNTKVLIYIADLLFRAGDFQGLNEQLVSLFKKHGQLKQ 87 Query: 296 AITAVVQKAMEYIDVAPDVETRIELIKTLSSVAAGKIYVEIERARLIKRLAKIKEEQGKI 475 ++T++VQ M Y+ D++T+I LI+TL ++ GKIYVE+ERARL + L++IKEEQG I Sbjct: 88 SMTSLVQHVMTYLPGIDDLKTKINLIETLRTITDGKIYVEVERARLTQLLSQIKEEQGDI 147 Query: 476 DEAAEIMQEVAVETFGSMAKTEKLAFILEQVRLCLDRQDYVRAQILSRKISPRVFDAD 649 A EI+ VET+GS EK+AFIL+QVRL L R DY A ++KI+ + F+ + Sbjct: 148 KSAQEILCNEPVETYGSFDLKEKVAFILDQVRLFLLRSDYYMASTYTKKINVKFFEKE 205
>RPN5_YEAST (Q12250) 26S proteasome regulatory subunit RPN5 (Proteasome| non-ATPase subunit 5) Length = 445 Score = 155 bits (391), Expect = 1e-37 Identities = 81/176 (46%), Positives = 122/176 (69%), Gaps = 2/176 (1%) Frame = +2 Query: 119 DAAIESLLNTEKQCRLAGDVAGTRKAAVDIVELCFKDGAWKALNDQIVVLSKRRGQLKQA 298 ++A++ LL EK+ R A D+A +++ IV+L W LN+Q+ +LSK+ GQLK + Sbjct: 33 NSALDQLLVLEKKTRQASDLASSKEVLAKIVDLLASRNKWDDLNEQLTLLSKKHGQLKLS 92 Query: 299 ITAVVQKAMEYIDVAP--DVETRIELIKTLSSVAAGKIYVEIERARLIKRLAKIKEEQGK 472 I ++QK MEY+ + D+ TRI +I+T+ V KI+VE+ERAR+ K L +IK+E+GK Sbjct: 93 IQYMIQKVMEYLKSSKSLDLNTRISVIETIRVVTENKIFVEVERARVTKDLVEIKKEEGK 152 Query: 473 IDEAAEIMQEVAVETFGSMAKTEKLAFILEQVRLCLDRQDYVRAQILSRKISPRVF 640 IDEAA+I+ E+ VET+GSM +EK+ FILEQ+ L + + DY +A +LSRKI + F Sbjct: 153 IDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTF 208
>PFD3_SCHPO (Q10143) Probable prefoldin subunit 3| Length = 169 Score = 32.7 bits (73), Expect = 0.96 Identities = 23/110 (20%), Positives = 52/110 (47%), Gaps = 1/110 (0%) Frame = +2 Query: 302 TAVVQKAMEYIDVAPDVETRIELIKTLSSVAAGKIYVEIERARLIKRLAKIKEEQGK-ID 478 T+VV++ D PD+ ++ ++ L V E + A+++ + + Sbjct: 44 TSVVRRVASLDDKIPDIRKTLQSVQFLKERQGDSFTVTYELNDTLNAKAEVEAKDNVYLW 103 Query: 479 EAAEIMQEVAVETFGSMAKTEKLAFILEQVRLCLDRQDYVRAQILSRKIS 628 A +M E VE ++ T+KL E ++ C + +++RAQ+ + +++ Sbjct: 104 LGANVMLEYTVEEAEALL-TQKLNSAEETLKACKEDLEFLRAQVTTMEVN 152
>RL36A_SCHPO (Q92365) 60S ribosomal protein L36-A| Length = 99 Score = 32.7 bits (73), Expect = 0.96 Identities = 23/77 (29%), Positives = 35/77 (45%) Frame = +2 Query: 269 SKRRGQLKQAITAVVQKAMEYIDVAPDVETRIELIKTLSSVAAGKIYVEIERARLIKRLA 448 S+R+GQL + + V E AP +ELI+ A K+ KRL Sbjct: 25 SRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAK--------KRLG 76 Query: 449 KIKEEQGKIDEAAEIMQ 499 +K +GKI+E ++Q Sbjct: 77 TLKRAKGKIEELTSVIQ 93
>GPR97_MOUSE (Q8R0T6) Probable G-protein coupled receptor 97 precursor| Length = 542 Score = 32.0 bits (71), Expect = 1.6 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 19/88 (21%) Frame = -1 Query: 403 FSSSDTAQCFDKLNTCLHVWCHVDVLHRFLHHSSNCLLE-----------------LASP 275 F +DTAQCF K H C V L R+ + + LLE +++ Sbjct: 41 FDLNDTAQCFTKCGQSEHSPCDVGNLQRYWLNYESYLLENSMETVDMPFVKALIQNISTD 100 Query: 274 LGED--DDLVVESLPGAVLEAELDDVDG 197 + ED L++ +P V++ E + DG Sbjct: 101 VSEDLLYSLMLSQIPRQVMQGEDEPADG 128
>TIG_VIBCH (Q9KQS5) Trigger factor (TF)| Length = 433 Score = 31.6 bits (70), Expect = 2.1 Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 3/72 (4%) Frame = +2 Query: 335 DVAPDVETRIELIKTLSSVAAGKIYVEIERARLIKRLAKIKEEQG---KIDEAAEIMQEV 505 +V P+VE +K L ++A K E+ A + + L ++++Q ++DEAAE + V Sbjct: 110 EVYPEVE-----LKGLENIAVEKPAAEVTDADVAEMLETLRKQQATWKEVDEAAENGKRV 164 Query: 506 AVETFGSMAKTE 541 +++ GS+ E Sbjct: 165 SIDFVGSIDGVE 176
>PEPL_MOUSE (Q9R269) Periplakin| Length = 1755 Score = 31.2 bits (69), Expect = 2.8 Identities = 24/94 (25%), Positives = 44/94 (46%) Frame = +2 Query: 290 KQAITAVVQKAMEYIDVAPDVETRIELIKTLSSVAAGKIYVEIERARLIKRLAKIKEEQG 469 +Q + V + +Y D E E +++L + G+ +RARL AK+KEE+ Sbjct: 779 EQEVQKVYADSQQYQQAVKDYELEAEKLRSLLDLENGRNSHVNKRARLQSPAAKVKEEEA 838 Query: 470 KIDEAAEIMQEVAVETFGSMAKTEKLAFILEQVR 571 + AA+ + A+ + + + L F L +R Sbjct: 839 AL--AAKFTEVNAI----NRQRLQNLEFALNLLR 866
>PEPL_HUMAN (O60437) Periplakin (195 kDa cornified envelope precursor protein)| (190 kDa paraneoplastic pemphigus antigen) Length = 1756 Score = 31.2 bits (69), Expect = 2.8 Identities = 22/94 (23%), Positives = 43/94 (45%) Frame = +2 Query: 290 KQAITAVVQKAMEYIDVAPDVETRIELIKTLSSVAAGKIYVEIERARLIKRLAKIKEEQG 469 +Q + + + +Y D E E +++L + G+ +RARL K+KEE+ Sbjct: 781 EQEVQKICANSQQYQQAVKDYELEAEKLRSLLDLENGRSSHVSKRARLQSPATKVKEEEA 840 Query: 470 KIDEAAEIMQEVAVETFGSMAKTEKLAFILEQVR 571 + AA+ + A+ + + + L F L +R Sbjct: 841 AL--AAKFTEVYAI----NRQRLQNLEFALNLLR 868
>TLE1_BRARE (O13168) Groucho 1 protein (Fragment)| Length = 535 Score = 30.8 bits (68), Expect = 3.6 Identities = 19/46 (41%), Positives = 22/46 (47%) Frame = -2 Query: 261 TIWSLRAFQAPSLKQSSTMSTAAFLVPATSPARRHCFSVLRSDSIA 124 TIW L A Q P +K T S A A SP + CFS +IA Sbjct: 320 TIWDL-ASQTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIA 364
>TLE2_BRARE (O13166) Groucho 2 protein| Length = 761 Score = 30.8 bits (68), Expect = 3.6 Identities = 19/46 (41%), Positives = 22/46 (47%) Frame = -2 Query: 261 TIWSLRAFQAPSLKQSSTMSTAAFLVPATSPARRHCFSVLRSDSIA 124 TIW L A Q P +K T S A A SP + CFS +IA Sbjct: 546 TIWDL-ASQTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIA 590
>CTR9_YEAST (P89105) Protein CTR9| Length = 1077 Score = 30.8 bits (68), Expect = 3.6 Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 2/95 (2%) Frame = +2 Query: 347 DVETRIELIKTLSSVAAGKIYVEIERARLIKRLAKIKEEQGKIDEAAEIMQEVAVETFGS 526 ++E RI+L +T A + E E + KE++ KIDEA +I++E ++ G Sbjct: 876 ELEQRIQLGETTMKSALERSLNEQEEFK--------KEQRAKIDEARKILEENELKEQGW 927 Query: 527 MAKTEKLAFILEQVRLCLDRQ--DYVRAQILSRKI 625 M + E E RL L++Q +Y + Q ++KI Sbjct: 928 MKQEE------EARRLKLEKQAEEYRKLQDEAQKI 956
>CCHCR_MOUSE (Q8K2I2) Coiled-coil alpha-helical rod protein 1 (Alpha helical| coiled-coil rod protein) Length = 770 Score = 30.8 bits (68), Expect = 3.6 Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 10/101 (9%) Frame = +2 Query: 227 DGAWKALNDQIVVLSKRRGQLKQAITAVVQKAM---EYIDVAPDVETRIELIKTLSSVAA 397 +G K+LN + +KR G+ KQ A + M + ++E ++ L+++L Sbjct: 198 EGLEKSLNS---LETKRAGEAKQLAMAQKEADMLRNQLSKTQEELEAQVTLVESLRKYVG 254 Query: 398 GKIYVE-------IERARLIKRLAKIKEEQGKIDEAAEIMQ 499 ++ E +ER L+ L +KE++ + E++Q Sbjct: 255 EQVLPEFPSQEWELERKELLDTLKHLKEDRADLQATVELLQ 295 Score = 30.4 bits (67), Expect = 4.8 Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Frame = +2 Query: 347 DVETRIELIKTLSSVAAGKIYVEIERARLIKRLAKIKEEQGKIDEA-AEIMQEVAVETFG 523 D E ++ V + E+ER RLI+ ++++E + E+ A + Q++ G Sbjct: 520 DAELQLSAHLIQQEVGRAREQGEVERRRLIEVAQQLEQELQRAQESLASVGQQLEAARRG 579 Query: 524 SMAKTEKLAFILEQVRLCLDRQDYVRAQILSRKIS 628 TE+ A + ++ L +Q + Q L K++ Sbjct: 580 QQESTEEAASLRQE----LTQQQEIYGQALQEKVA 610
>MECA_STRR6 (Q8DPE0) Adapter protein mecA| Length = 245 Score = 30.4 bits (67), Expect = 4.8 Identities = 23/81 (28%), Positives = 38/81 (46%) Frame = +2 Query: 326 EYIDVAPDVETRIELIKTLSSVAAGKIYVEIERARLIKRLAKIKEEQGKIDEAAEIMQEV 505 E ++PD E IKTL A K +IE + ++++ +EEQ + ++ AE +E Sbjct: 97 ELAQMSPD-----EFIKTLEKSIADKTKDDIEAIQSLEQVEAKEEEQEQAEQEAESKKEP 151 Query: 506 AVETFGSMAKTEKLAFILEQV 568 + S AK L + V Sbjct: 152 YIYYILSFAKLADLVAFAKTV 172
>TAXB1_XENTR (Q6P3P1) Tax1-binding protein 1 homolog| Length = 841 Score = 30.4 bits (67), Expect = 4.8 Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 2/100 (2%) Frame = +2 Query: 356 TRIELIKTLSSVAAGKIYVEIERARLIKRLAKIKEEQGKIDEAAEIMQEVAVETFGSMAK 535 T IE K L+ V K ++ + LI KEE GK+ +++ E + + Sbjct: 295 TEIENTKLLTEVQTLK-NLDTNKENLISHY---KEELGKLQICLADKEKMNKELLQNSSN 350 Query: 536 TEKLAFILEQVRLCLDRQDYVRAQI--LSRKISPRVFDAD 649 E +AF+ +Q+R D+ R ++ +SR++S V D Sbjct: 351 KEDIAFLKQQLRKLEDQHQASRQEVSLMSRELSEAVNKRD 390
>RL36B_SCHPO (O94658) 60S ribosomal protein L36-B| Length = 99 Score = 30.4 bits (67), Expect = 4.8 Identities = 22/77 (28%), Positives = 33/77 (42%) Frame = +2 Query: 269 SKRRGQLKQAITAVVQKAMEYIDVAPDVETRIELIKTLSSVAAGKIYVEIERARLIKRLA 448 S+R+G L + V E AP +ELI+ A K+ KRL Sbjct: 25 SRRKGHLSKRTAFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAK--------KRLG 76 Query: 449 KIKEEQGKIDEAAEIMQ 499 +K +GKI+E ++Q Sbjct: 77 TLKRAKGKIEELTSVIQ 93
>SYV_FRATT (Q5NHZ4) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 919 Score = 30.4 bits (67), Expect = 4.8 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 7/97 (7%) Frame = +2 Query: 323 MEYIDVAPDVETRIELIKTLSSVAAGKIYVEIERARLIKRLAKIKEEQGKIDEAAEIMQE 502 +E+ D P ++I L+ AG + +E E+ARL K L K+K DE + ++ Sbjct: 826 IEFNDNPPTSLSQIVEGLELNIPLAGLVDIEAEKARLDKELDKLK------DEVDRVQKK 879 Query: 503 VAVETFGS-------MAKTEKLAFILEQVRLCLDRQD 592 ++ E F S A+ EKLA E L++++ Sbjct: 880 LSNERFVSNAPEAVVAAEQEKLAKYQELYAKTLEKKE 916
>YQIK_ECOLI (P77306) Inner membrane protein yqiK| Length = 553 Score = 30.0 bits (66), Expect = 6.2 Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 11/56 (19%) Frame = +2 Query: 194 AAVDIVELCFKDG-----AWKALNDQIVVLSKRRGQLK------QAITAVVQKAME 328 A V++ E K G A +ALND I VLS + LK QA+ AV++K++E Sbjct: 413 AIVELAEATRKKGLAEAEAQRALNDAINVLSDEQTSLKFKLALLQALPAVIEKSVE 468
>MECA_STRPN (Q97Q68) Adapter protein mecA| Length = 245 Score = 30.0 bits (66), Expect = 6.2 Identities = 23/81 (28%), Positives = 38/81 (46%) Frame = +2 Query: 326 EYIDVAPDVETRIELIKTLSSVAAGKIYVEIERARLIKRLAKIKEEQGKIDEAAEIMQEV 505 E ++PD E IKTL A K +IE + ++++ +EEQ + ++ AE +E Sbjct: 97 ELAQMSPD-----EFIKTLEKSIADKTKDDIEAIQSLEQVEVKEEEQEQAEQEAESKKEP 151 Query: 506 AVETFGSMAKTEKLAFILEQV 568 + S AK L + V Sbjct: 152 YIYYILSFAKLADLVAFAKTV 172
>DCE1_MOUSE (P48318) Glutamate decarboxylase 1 (EC 4.1.1.15) (Glutamate| decarboxylase, 67 kDa isoform) (GAD-67) (67 kDa glutamic acid decarboxylase) Length = 593 Score = 30.0 bits (66), Expect = 6.2 Identities = 17/58 (29%), Positives = 29/58 (50%) Frame = +2 Query: 476 DEAAEIMQEVAVETFGSMAKTEKLAFILEQVRLCLDRQDYVRAQILSRKISPRVFDAD 649 D+A + + V + F M K + Q+ CL+ DY+ A+I +R+ VFD + Sbjct: 449 DKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELADYLYAKIKNREEFEMVFDGE 506
>RECA_LACDE (Q02347) Protein recA (Recombinase A) (Fragment)| Length = 104 Score = 30.0 bits (66), Expect = 6.2 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%) Frame = +2 Query: 353 ETRIELIKTLSSVAAGKIYVEIERARLIKRLAKIKEEQGK--IDEAAEIMQEVAVETFGS 526 E +++ TL S A I V A L+ R A+I+ E G + A +M + + G+ Sbjct: 22 EEGLQIADTLISSGAIDIVVVDSVAVLVPR-AEIEGEMGDSHVGLQARLMSQALRKLSGT 80 Query: 527 MAKTEKLAFILEQVR 571 +AKT+ +A + Q+R Sbjct: 81 IAKTKTIAIFINQIR 95
>YIAV_ECOLI (P37683) Inner membrane protein yiaV precursor| Length = 378 Score = 29.6 bits (65), Expect = 8.1 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = -1 Query: 301 NCLLELASPLGEDDDLVVESLPGAVLEAELDDVDGGLPGAGHIS 170 N LL LA G+D ++V +LPG V +L + +PG + S Sbjct: 267 NSLLRLAP--GDDAEVVFNALPGKVFSGKLAAISPAVPGGAYQS 308
>GLTL1_MOUSE (Q9JJ61) Putative polypeptide| N-acetylgalactosaminyltransferase-like protein 1 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase-like protein 1) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase-like protein 1) (Polypeptide G Length = 558 Score = 29.6 bits (65), Expect = 8.1 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -2 Query: 201 TAAFLVPATSPARRHCFSVLRSDSIAASRPL 109 +A L P P R+H F+ L SD +++ RP+ Sbjct: 75 SAKQLKPGEDPYRQHAFNQLESDKLSSDRPI 105
>MYS2_DICDI (P08799) Myosin-2 heavy chain, non muscle (Myosin II heavy chain, non| muscle) Length = 2116 Score = 29.6 bits (65), Expect = 8.1 Identities = 47/195 (24%), Positives = 79/195 (40%), Gaps = 27/195 (13%) Frame = +2 Query: 119 DAAIESLL-----NTEKQCRLAGDVAGTRKAAVDIV--------ELCFKDGAWKALNDQI 259 DA I+ L TE + + D TRK D+ E+ D K L I Sbjct: 1539 DAEIDDLRARLDRETESRIKSDEDKKNTRKQFADLEAKVEEAQREVVTIDRLKKKLESDI 1598 Query: 260 VVLS--------------KRRGQLKQAITAVVQKAMEYIDVAPDVETRIELIKTLSSVAA 397 + LS K + +L+Q + A + A E A D E R ++ + + + A Sbjct: 1599 IDLSTQLDTETKSRIKIEKSKKKLEQTL-AERRAAEEGSSKAADEEIRKQVWQEVDELRA 1657 Query: 398 GKIYVEIERARLIKRLAKIKEEQGKIDEAAEIMQEVAVETFGSMAKTEKLAFILEQVRLC 577 ++ ERA L KIK ++DE E +++ + + L LE+VR Sbjct: 1658 ---QLDSERAALNASEKKIKSLVAEVDEVKEQLEDEILAKDKLVKAKRALEVELEEVRDQ 1714 Query: 578 LDRQDYVRAQILSRK 622 L+ ++ R+++ K Sbjct: 1715 LEEEEDSRSELEDSK 1729 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,630,489 Number of Sequences: 219361 Number of extensions: 1328009 Number of successful extensions: 4666 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 4512 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4660 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6143359464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
