ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd27d04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_468146.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1281 Score = 494 bits (249), Expect = e-136 Identities = 444/509 (87%) Strand = Plus / Plus Query: 81 atggcgccggagccggaggacgacatcatggcggagaagaacccgcgccccctcgacgag 140 ||||||||||||||||| |||||||||||| ||||||||||| ||||| ||||||||| Sbjct: 1 atggcgccggagccggaagacgacatcatgaacgagaagaacccccgcccgctcgacgag 60 Query: 141 gacgacatcgccctcctcaagacctacgggcttgggccatactccacgagcatcaagacg 200 ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| | Sbjct: 61 gacgacatcgctctcctcaagacctacgggcttgggccatactccacaagcattaagaag 120 Query: 201 gccgagaaggagatcaaggagttggccaagaggatcaatgacctttgtgggataaaggag 260 | ||||| || || || || |||| |||| ||||||||||||||||||||| |||||| Sbjct: 121 gtggagaaagaaataaaagaaatggctaagaagatcaatgacctttgtgggattaaggag 180 Query: 261 tctgatactgggctagctccacctagccagtgggatctagtgtcagacaaacagatgatg 320 ||||| |||||||| || ||||| ||||| ||||||||||| ||||| || ||||||||| Sbjct: 181 tctgacactgggctggcaccacccagccaatgggatctagtatcagataagcagatgatg 240 Query: 321 caggaggagcagccactgcaagtagcaaggtgcaccaagattataaaccctaataccgac 380 || || ||||| || |||||||| || ||||| ||||||||||||| |||||||| || Sbjct: 241 caagaagagcaaccgctgcaagtggctaggtgtaccaagattataagtcctaatactgat 300 Query: 381 gatgccaaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggtgat 440 ||||| ||||| |||| |||||||||||||||||||||||||| ||||| | || ||| Sbjct: 301 gatgctaaatatgtgattaatgtaaaacaaattgcaaagtttgtggttggcctaggggat 360 Query: 441 aaagtttccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaagtac 500 |||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 361 aaagtttctccaactgacattgaggaagggatgagagtgggtgttgatcggaacaagtac 420 Query: 501 cagattcagattccgttgccaccgaagattgaccccagcgtcactatgatgacggttgag 560 |||||||| ||||| |||||||| || |||||||| || || || |||||||| |||||| Sbjct: 421 cagattcaaattcctttgccacccaaaattgacccaagtgttaccatgatgacagttgag 480 Query: 561 gagaaaccagatgtcacgtataatgatgt 589 || ||||| ||||| || ||||||||||| Sbjct: 481 gaaaaacctgatgtgacatataatgatgt 509
>gb|AY104186.1| Zea mays PCO090008 mRNA sequence Length = 1614 Score = 412 bits (208), Expect = e-112 Identities = 437/512 (85%), Gaps = 1/512 (0%) Strand = Plus / Plus Query: 78 gccatggcgccggagccggaggacgacatcatggcggagaagaacccgcgccccctcgac 137 ||||||||||||||||||||||| || || ||| |||||||| || ||||| |||||| Sbjct: 101 gccatggcgccggagccggaggatgatattatgaacgagaagaatccccgcccgctcgac 160 Query: 138 gaggacgacatcgccctcctcaagacctacgggcttgggccatactccacgagcatcaag 197 |||||||||||||| |||||||| ||||| ||||||||||| ||||| || ||||| ||| Sbjct: 161 gaggacgacatcgcgctcctcaaaacctatgggcttgggccgtactcgactagcattaag 220 Query: 198 acggccgagaaggagatcaaggagttggccaagaggatcaatgacctttgtgggataaag 257 | || |||||||||||||||||| ||||||||| ||||||||||||||||| |||||| Sbjct: 221 aaggtcgagaaggagatcaaggaaatggccaagaaaatcaatgacctttgtggtataaag 280 Query: 258 gagtctgatactgggctagctccacctagccagtgggatctagtgtcagacaaacagatg 317 ||||||||||| ||| | ||||||||||||||||||||| | || ||||| ||||||||| Sbjct: 281 gagtctgatacagggttggctccacctagccagtgggatttggtttcagataaacagatg 340 Query: 318 atgcaggaggagcagccactgcaagtagcaaggtgcaccaagattataaaccctaatacc 377 ||||| || || || || | ||||| |||||||| || ||||| |||| ||||||||| Sbjct: 341 atgcaagaagaacaaccgttacaagtggcaaggtgtacaaagatcataagccctaatacg 400 Query: 378 gacgatgccaaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggt 437 || ||||||||||| | || |||||||||||||| ||||| |||||||||||| |||| Sbjct: 401 gatgatgccaaatatgttataaatgtaaaacaaatcgcaaaatttgttgttggactgggg 460 Query: 438 gataaagtttccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaag 497 |||||||| || ||||||||||| |||||||||||||| || ||||||||||| |||||| Sbjct: 461 gataaagtgtctccaactgatatcgaggaagggatgagggttggtgttgatcgcaacaag 520 Query: 498 taccagattcagattccgttgccaccgaagattgaccccagcgtcactatgatgacggtt 557 ||||||||||| || || | ||||| || |||||||| || || || |||||||| || Sbjct: 521 taccagattcaaatccctctcccacc-aaaattgacccaagtgttaccatgatgactgtg 579 Query: 558 gaggagaaaccagatgtcacgtataatgatgt 589 ||||| || |||||||| ||||| |||||||| Sbjct: 580 gaggaaaagccagatgtgacgtacaatgatgt 611
>dbj|AK061876.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A12, full insert sequence Length = 1567 Score = 379 bits (191), Expect = e-102 Identities = 434/515 (84%) Strand = Plus / Plus Query: 78 gccatggcgccggagccggaggacgacatcatggcggagaagaacccgcgccccctcgac 137 ||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||| Sbjct: 111 gccatggcgccggagcccgaggacgacatcatgaacgagaagaacccgcgcccgctcgac 170 Query: 138 gaggacgacatcgccctcctcaagacctacgggcttgggccatactccacgagcatcaag 197 |||||||||||||||||||||||||||||||| ||||| || ||||| || ||||| ||| Sbjct: 171 gaggacgacatcgccctcctcaagacctacggtcttggaccttactcgaccagcattaag 230 Query: 198 acggccgagaaggagatcaaggagttggccaagaggatcaatgacctttgtgggataaag 257 | || |||||||| ||||| ||| |||| |||| ||| ||||| || ||||| || || Sbjct: 231 aaggttgagaaggaaatcaaagagatggcgaagaagataaatgatctctgtggaattaaa 290 Query: 258 gagtctgatactgggctagctccacctagccagtgggatctagtgtcagacaaacagatg 317 |||||||| ||||| | |||||||||||||||||||| || || || || || |||||| Sbjct: 291 gagtctgacactggattggctccacctagccagtgggaccttgtatccgataagcagatg 350 Query: 318 atgcaggaggagcagccactgcaagtagcaaggtgcaccaagattataaaccctaatacc 377 |||||||||||||| || ||||| || ||||| ||||| ||||| || | |||||| || Sbjct: 351 atgcaggaggagcaacccctgcaggttgcaagatgcacaaagatcatcagccctaacacg 410 Query: 378 gacgatgccaaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggt 437 |||||||| ||||| | |||||||| || |||||||| |||||||| ||||| ||||| Sbjct: 411 gacgatgctaaatatgtcatcaatgtcaagcaaattgcgaagtttgtggttgggttgggc 470 Query: 438 gataaagtttccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaag 497 || || || ||||| |||||||| |||||||| ||| | || || |||||||| |||||| Sbjct: 471 gacaaggtctcccccactgatatcgaggaaggaatgcgggttggagttgatcgaaacaag 530 Query: 498 taccagattcagattccgttgccaccgaagattgaccccagcgtcactatgatgacggtt 557 ||||| ||||| ||||| |||||||| |||||||| |||||||| || |||||||| || Sbjct: 531 taccaaattcaaattcctttgccaccaaagattgatcccagcgttaccatgatgactgtg 590 Query: 558 gaggagaaaccagatgtcacgtataatgatgttgg 592 || || ||||||||||| || || ||||||||||| Sbjct: 591 gaagaaaaaccagatgtgacttacaatgatgttgg 625
>dbj|AK070538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060N22, full insert sequence Length = 1828 Score = 379 bits (191), Expect = e-102 Identities = 434/515 (84%) Strand = Plus / Plus Query: 78 gccatggcgccggagccggaggacgacatcatggcggagaagaacccgcgccccctcgac 137 ||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||| Sbjct: 112 gccatggcgccggagcccgaggacgacatcatgaacgagaagaacccgcgcccgctcgac 171 Query: 138 gaggacgacatcgccctcctcaagacctacgggcttgggccatactccacgagcatcaag 197 |||||||||||||||||||||||||||||||| ||||| || ||||| || ||||| ||| Sbjct: 172 gaggacgacatcgccctcctcaagacctacggtcttggaccttactcgaccagcattaag 231 Query: 198 acggccgagaaggagatcaaggagttggccaagaggatcaatgacctttgtgggataaag 257 | || |||||||| ||||| ||| |||| |||| ||| ||||| || ||||| || || Sbjct: 232 aaggttgagaaggaaatcaaagagatggcgaagaagataaatgatctctgtggaattaaa 291 Query: 258 gagtctgatactgggctagctccacctagccagtgggatctagtgtcagacaaacagatg 317 |||||||| ||||| | |||||||||||||||||||| || || || || || |||||| Sbjct: 292 gagtctgacactggattggctccacctagccagtgggaccttgtatccgataagcagatg 351 Query: 318 atgcaggaggagcagccactgcaagtagcaaggtgcaccaagattataaaccctaatacc 377 |||||||||||||| || ||||| || ||||| ||||| ||||| || | |||||| || Sbjct: 352 atgcaggaggagcaacccctgcaggttgcaagatgcacaaagatcatcagccctaacacg 411 Query: 378 gacgatgccaaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggt 437 |||||||| ||||| | |||||||| || |||||||| |||||||| ||||| ||||| Sbjct: 412 gacgatgctaaatatgtcatcaatgtcaagcaaattgcgaagtttgtggttgggttgggc 471 Query: 438 gataaagtttccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaag 497 || || || ||||| |||||||| |||||||| ||| | || || |||||||| |||||| Sbjct: 472 gacaaggtctcccccactgatatcgaggaaggaatgcgggttggagttgatcgaaacaag 531 Query: 498 taccagattcagattccgttgccaccgaagattgaccccagcgtcactatgatgacggtt 557 ||||| ||||| ||||| |||||||| |||||||| |||||||| || |||||||| || Sbjct: 532 taccaaattcaaattcctttgccaccaaagattgatcccagcgttaccatgatgactgtg 591 Query: 558 gaggagaaaccagatgtcacgtataatgatgttgg 592 || || ||||||||||| || || ||||||||||| Sbjct: 592 gaagaaaaaccagatgtgacttacaatgatgttgg 626
>dbj|AB033535.1| Oryza sativa (japonica cultivar-group) OsRPT1 mRNA for 26S proteasome regulatory particle triple-A ATPase subunit1, complete cds Length = 1481 Score = 379 bits (191), Expect = e-102 Identities = 434/515 (84%) Strand = Plus / Plus Query: 78 gccatggcgccggagccggaggacgacatcatggcggagaagaacccgcgccccctcgac 137 ||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||| Sbjct: 15 gccatggcgccggagcccgaggacgacatcatgaacgagaagaacccgcgcccgctcgac 74 Query: 138 gaggacgacatcgccctcctcaagacctacgggcttgggccatactccacgagcatcaag 197 |||||||||||||||||||||||||||||||| ||||| || ||||| || ||||| ||| Sbjct: 75 gaggacgacatcgccctcctcaagacctacggtcttggaccttactcgaccagcattaag 134 Query: 198 acggccgagaaggagatcaaggagttggccaagaggatcaatgacctttgtgggataaag 257 | || |||||||| ||||| ||| |||| |||| ||| ||||| || ||||| || || Sbjct: 135 aaggttgagaaggaaatcaaagagatggcgaagaagataaatgatctctgtggaattaaa 194 Query: 258 gagtctgatactgggctagctccacctagccagtgggatctagtgtcagacaaacagatg 317 |||||||| ||||| | |||||||||||||||||||| || || || || || |||||| Sbjct: 195 gagtctgacactggattggctccacctagccagtgggaccttgtatccgataagcagatg 254 Query: 318 atgcaggaggagcagccactgcaagtagcaaggtgcaccaagattataaaccctaatacc 377 |||||||||||||| || ||||| || ||||| ||||| ||||| || | |||||| || Sbjct: 255 atgcaggaggagcaacccctgcaggttgcaagatgcacaaagatcatcagccctaacacg 314 Query: 378 gacgatgccaaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggt 437 |||||||| ||||| | |||||||| || |||||||| |||||||| ||||| ||||| Sbjct: 315 gacgatgctaaatatgtcatcaatgtcaagcaaattgcgaagtttgtggttgggttgggc 374 Query: 438 gataaagtttccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaag 497 || || || ||||| |||||||| |||||||| ||| | || || |||||||| |||||| Sbjct: 375 gacaaggtctcccccactgatatcgaggaaggaatgcgggttggagttgatcgaaacaag 434 Query: 498 taccagattcagattccgttgccaccgaagattgaccccagcgtcactatgatgacggtt 557 ||||| ||||| ||||| |||||||| |||||||| |||||||| || |||||||| || Sbjct: 435 taccaaattcaaattcctttgccaccaaagattgatcccagcgttaccatgatgactgtg 494 Query: 558 gaggagaaaccagatgtcacgtataatgatgttgg 592 || || ||||||||||| || || ||||||||||| Sbjct: 495 gaagaaaaaccagatgtgacttacaatgatgttgg 529
>dbj|AK100060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159J17, full insert sequence Length = 1510 Score = 371 bits (187), Expect = 2e-99 Identities = 434/515 (84%), Gaps = 1/515 (0%) Strand = Plus / Plus Query: 78 gccatggcgccggagccggaggacgacatcatggcggagaagaacccgcgccccctcgac 137 ||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||| Sbjct: 111 gccatggcgccggagcccgaggacgacatcatgaacgagaagaacccgcgcccgctcgac 170 Query: 138 gaggacgacatcgccctcctcaagacctacgggcttgggccatactccacgagcatcaag 197 |||||||||||||||||||||||||||||||| ||||| || ||||| || ||||| ||| Sbjct: 171 gaggacgacatcgccctcctcaagacctacggtcttggaccttactcgaccagcattaag 230 Query: 198 acggccgagaaggagatcaaggagttggccaagaggatcaatgacctttgtgggataaag 257 | || |||||||| ||||| ||| |||| |||| ||| ||||| || ||||| || || Sbjct: 231 aaggttgagaaggaaatcaaagagatggcgaagaagataaatgatctctgtggaattaaa 290 Query: 258 gagtctgatactgggctagctccacctagccagtgggatctagtgtcagacaaacagatg 317 |||||||| ||||| | |||||||||||||||||||| || || || || || |||||| Sbjct: 291 gagtctgacactggattggctccacctagccagtgggaccttgtatccgataagcagatg 350 Query: 318 atgcaggaggagcagccactgcaagtagcaaggtgcaccaagattataaaccctaatacc 377 |||||||||||||| || ||||| || ||||| ||||| ||||| || | |||||| || Sbjct: 351 atgcaggaggagcaacccctgcaggttgcaagatgcacaaagatcatcagccctaacacg 410 Query: 378 gacgatgccaaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggt 437 |||||||| ||||| | |||||||| || |||||||| |||||||| ||||| ||||| Sbjct: 411 gacgatgctaaatatgtcatcaatgt-aagcaaattgcgaagtttgtggttgggttgggc 469 Query: 438 gataaagtttccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaag 497 || || || ||||| |||||||| |||||||| ||| | || || |||||||| |||||| Sbjct: 470 gacaaggtctcccccactgatatcgaggaaggaatgcgggttggagttgatcgaaacaag 529 Query: 498 taccagattcagattccgttgccaccgaagattgaccccagcgtcactatgatgacggtt 557 ||||| ||||| ||||| |||||||| |||||||| |||||||| || |||||||| || Sbjct: 530 taccaaattcaaattcctttgccaccaaagattgatcccagcgttaccatgatgactgtg 589 Query: 558 gaggagaaaccagatgtcacgtataatgatgttgg 592 || || ||||||||||| || || ||||||||||| Sbjct: 590 gaagaaaaaccagatgtgacttacaatgatgttgg 624
>dbj|AK103801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033146D17, full insert sequence Length = 1512 Score = 363 bits (183), Expect = 4e-97 Identities = 432/515 (83%) Strand = Plus / Plus Query: 78 gccatggcgccggagccggaggacgacatcatggcggagaagaacccgcgccccctcgac 137 ||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||| Sbjct: 112 gccatggcgccggagcccgaggacgacatcatgaacgagaagaacccgcgcccgctcgac 171 Query: 138 gaggacgacatcgccctcctcaagacctacgggcttgggccatactccacgagcatcaag 197 |||||||||||||||||||||||||||||||| ||||| || ||||| || ||||| ||| Sbjct: 172 gaggacgacatcgccctcctcaagacctacggtcttggaccttactcgaccagcattaag 231 Query: 198 acggccgagaaggagatcaaggagttggccaagaggatcaatgacctttgtgggataaag 257 | || ||| |||| ||||| ||| |||| |||| ||| ||||| || ||||| || || Sbjct: 232 aaggttgaggaggaaatcaaagagatggcgaagaagataaatgatctctgtggaattaaa 291 Query: 258 gagtctgatactgggctagctccacctagccagtgggatctagtgtcagacaaacagatg 317 |||||||| ||||| | |||||||||||||||||||| || || || || || |||||| Sbjct: 292 gagtctgacactggattggctccacctagccagtgggaccttgtatccgataagcagatg 351 Query: 318 atgcaggaggagcagccactgcaagtagcaaggtgcaccaagattataaaccctaatacc 377 |||||||||||||| || ||||| || ||||| ||||| ||||| || | |||||| || Sbjct: 352 atgcaggaggagcaacccctgcaggttgcaagatgcacaaagatcatcagccctaacacg 411 Query: 378 gacgatgccaaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggt 437 |||||||| ||||| | |||||||| || |||||||| |||||||| ||||| ||||| Sbjct: 412 gacgatgctaaatatgtcatcaatgtcaagcaaattgcgaagtttgtggttgggttgggc 471 Query: 438 gataaagtttccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaag 497 || || || ||||| |||||||| |||||||| ||| | || || |||| ||| |||||| Sbjct: 472 gacaaggtctcccccactgatatcgaggaaggaatgcgggttggagttggtcgaaacaag 531 Query: 498 taccagattcagattccgttgccaccgaagattgaccccagcgtcactatgatgacggtt 557 ||||| ||||| ||||| |||||||| |||||||| |||||||| || |||||||| || Sbjct: 532 taccaaattcaaattcctttgccaccaaagattgatcccagcgttaccatgatgactgtg 591 Query: 558 gaggagaaaccagatgtcacgtataatgatgttgg 592 || || ||||||||||| || || ||||||||||| Sbjct: 592 gaagaaaaaccagatgtgacttacaatgatgttgg 626
>dbj|AK109151.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-F10, full insert sequence Length = 666 Score = 353 bits (178), Expect = 4e-94 Identities = 316/362 (87%) Strand = Plus / Plus Query: 228 aagaggatcaatgacctttgtgggataaaggagtctgatactgggctagctccacctagc 287 |||| ||||||||||||||||||||| ||||||||||| |||||||| || ||||| ||| Sbjct: 2 aagaagatcaatgacctttgtgggattaaggagtctgacactgggctggcaccacccagc 61 Query: 288 cagtgggatctagtgtcagacaaacagatgatgcaggaggagcagccactgcaagtagca 347 || ||||||||||| ||||| || ||||||||||| || ||||| || |||||||| || Sbjct: 62 caatgggatctagtatcagataagcagatgatgcaagaagagcaaccgctgcaagtggct 121 Query: 348 aggtgcaccaagattataaaccctaataccgacgatgccaaatacatgatcaatgtaaaa 407 ||||| ||||||||||||| |||||||| || ||||| ||||| |||| ||||||||| Sbjct: 122 aggtgtaccaagattataagtcctaatactgatgatgctaaatatgtgattaatgtaaaa 181 Query: 408 caaattgcaaagtttgttgttggattgggtgataaagtttccccaactgatattgaggaa 467 ||||||||||||||||| ||||| | || ||||||||||| |||||||| ||||||||| Sbjct: 182 caaattgcaaagtttgtggttggcctaggggataaagtttctccaactgacattgaggaa 241 Query: 468 gggatgagagtcggtgttgatcggaacaagtaccagattcagattccgttgccaccgaag 527 ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || Sbjct: 242 gggatgagagtgggtgttgatcggaacaagtaccagattcaaattcctttgccacccaaa 301 Query: 528 attgaccccagcgtcactatgatgacggttgaggagaaaccagatgtcacgtataatgat 587 |||||||| || || || |||||||| |||||||| ||||| ||||| || ||||||||| Sbjct: 302 attgacccaagtgttaccatgatgacagttgaggaaaaacctgatgtgacatataatgat 361 Query: 588 gt 589 || Sbjct: 362 gt 363 Score = 168 bits (85), Expect = 1e-38 Identities = 112/121 (92%) Strand = Plus / Plus Query: 78 gccatggcgccggagccggaggacgacatcatggcggagaagaacccgcgccccctcgac 137 |||||||||||||||||||| |||||||||||| ||||||||||| ||||| |||||| Sbjct: 538 gccatggcgccggagccggaagacgacatcatgaacgagaagaacccccgcccgctcgac 597 Query: 138 gaggacgacatcgccctcctcaagacctacgggcttgggccatactccacgagcatcaag 197 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 598 gaggacgacatcgctctcctcaagacctacgggcttgggccatactccacaagcattaag 657 Query: 198 a 198 | Sbjct: 658 a 658
>gb|AF041258.1|AF041258 Prunus persica 26S proteasome subunit 7 mRNA, complete cds Length = 1539 Score = 252 bits (127), Expect = 1e-63 Identities = 391/479 (81%) Strand = Plus / Plus Query: 114 gagaagaacccgcgccccctcgacgaggacgacatcgccctcctcaagacctacgggctt 173 ||||||||||| | || || |||||||||||||||||||||||||||||||| ||| | Sbjct: 139 gagaagaaccctagaccgcttgacgaggacgacatcgccctcctcaagacctatgggtta 198 Query: 174 gggccatactccacgagcatcaagacggccgagaaggagatcaaggagttggccaagagg 233 ||||| || || || || |||| ||||||||||| ||||||| ||||| |||| | Sbjct: 199 gggccttattcaacacatattaagaaagccgagaaggaagtcaaggatttggctaagaag 258 Query: 234 atcaatgacctttgtgggataaaggagtctgatactgggctagctccacctagccagtgg 293 ||||||| | ||||| || ||||||||||||||||| ||||| |||| ||||||||| Sbjct: 259 gtcaatgatttgtgtggtattaaggagtctgatactggcttagctgcacccagccagtgg 318 Query: 294 gatctagtgtcagacaaacagatgatgcaggaggagcagccactgcaagtagcaaggtgc 353 ||||| || || ||||| || |||||||||||||||||||| || || || ||||| || Sbjct: 319 gatcttgtttctgacaagcaaatgatgcaggaggagcagcctcttcaggttgcaagatgt 378 Query: 354 accaagattataaaccctaataccgacgatgccaaatacatgatcaatgtaaaacaaatt 413 || ||||| || || || ||| | || ||||| |||||| | || ||||| || |||||| Sbjct: 379 acgaagataatcaatcccaattctgaggatgctaaatacgtcattaatgtcaagcaaatt 438 Query: 414 gcaaagtttgttgttggattgggtgataaagtttccccaactgatattgaggaagggatg 473 ||||||||||||||||| ||||||| || ||||| ||||||||||| || ||||| ||| Sbjct: 439 gcaaagtttgttgttgggctgggtgacaaggtttctccaactgatatagaagaaggcatg 498 Query: 474 agagtcggtgttgatcggaacaagtaccagattcagattccgttgccaccgaagattgac 533 | || || ||||| |||||||||| || ||||||||||| ||||| || ||||| || Sbjct: 499 cgtgtgggggttgacaggaacaagtatcaaattcagattcctttgcctccaaagatcgat 558 Query: 534 cccagcgtcactatgatgacggttgaggagaaaccagatgtcacgtataatgatgttgg 592 || || || || ||||||||||| || ||||| |||||||| || |||||||||||||| Sbjct: 559 ccaagtgtgaccatgatgacggtggaagagaagccagatgtaacatataatgatgttgg 617
>dbj|D86121.1|SPI26SPAS Spinacia oleracea L. mRNA for 26S proteasome ATPase subunit, complete cds Length = 1708 Score = 234 bits (118), Expect = 3e-58 Identities = 283/338 (83%) Strand = Plus / Plus Query: 255 aaggagtctgatactgggctagctccacctagccagtgggatctagtgtcagacaaacag 314 ||||| ||||||||||| |||| | |||||||| |||||||| || || ||||| || Sbjct: 268 aaggaatctgatactggattagcagctcctagccaatgggatctcgtctctgacaagcaa 327 Query: 315 atgatgcaggaggagcagccactgcaagtagcaaggtgcaccaagattataaaccctaat 374 ||||||||||||||||||||||| || || ||||| ||||||||||| || || || || Sbjct: 328 atgatgcaggaggagcagccactccaggttgcaagatgcaccaagataatcaatccaaac 387 Query: 375 accgacgatgccaaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattg 434 || || ||||| || || |||| ||||| || || |||||||||||||||||||| || Sbjct: 388 actgaagatgctaagtatgtgattaatgtgaagcagattgcaaagtttgttgttgggctg 447 Query: 435 ggtgataaagtttccccaactgatattgaggaagggatgagagtcggtgttgatcggaac 494 || ||||||||||| ||||| |||||||| ||||| ||| | || ||||||||| | ||| Sbjct: 448 ggagataaagtttctccaacagatattgaagaaggcatgcgtgttggtgttgatagaaac 507 Query: 495 aagtaccagattcagattccgttgccaccgaagattgaccccagcgtcactatgatgacg 554 |||||||||||||||||||| |||||||| |||||||||||||| || || |||||||| Sbjct: 508 aagtaccagattcagattcccttgccaccaaagattgaccccagtgtgaccatgatgact 567 Query: 555 gttgaggagaaaccagatgtcacgtataatgatgttgg 592 || || ||||| |||||||| || ||||| |||||||| Sbjct: 568 gtggaagagaagccagatgtgacatataacgatgttgg 605
>ref|NM_104252.2| Arabidopsis thaliana RPT1A; ATPase AT1G53750 (RPT1A) mRNA, complete cds Length = 1630 Score = 174 bits (88), Expect = 2e-40 Identities = 298/368 (80%) Strand = Plus / Plus Query: 225 gccaagaggatcaatgacctttgtgggataaaggagtctgatactgggctagctccacct 284 ||||||| |||||| || || ||||| || ||||||||||||||||| ||||||| || Sbjct: 287 gccaagaagatcaacgatctatgtggtatcaaggagtctgatactggtttagctcctccc 346 Query: 285 agccagtgggatctagtgtcagacaaacagatgatgcaggaggagcagccactgcaagta 344 || || |||||||| || || || || || |||||||| || ||||| || ||||| || Sbjct: 347 agtcaatgggatcttgtatctgataagcaaatgatgcaagaagagcaacctctgcaggtt 406 Query: 345 gcaaggtgcaccaagattataaaccctaataccgacgatgccaaatacatgatcaatgta 404 || || ||||| |||||||||| || || || || || ||||||||| | || ||||| Sbjct: 407 gcgagatgcacaaagattataagtccaaacactgaagacgccaaatacgtcataaatgtc 466 Query: 405 aaacaaattgcaaagtttgttgttggattgggtgataaagtttccccaactgatattgag 464 ||||||||||| ||||||||||||||| | || ||||||||||| || |||||||||||| Sbjct: 467 aaacaaattgctaagtttgttgttggacttggcgataaagtttctcccactgatattgag 526 Query: 465 gaagggatgagagtcggtgttgatcggaacaagtaccagattcagattccgttgccaccg 524 ||||| ||| | || || ||||||||||| || || |||||||||||||| | || || Sbjct: 527 gaaggcatgcgtgttggagttgatcggaataaatatcagattcagattcctctacctccc 586 Query: 525 aagattgaccccagcgtcactatgatgacggttgaggagaaaccagatgtcacgtataat 584 || || || || ||||| || |||||||| || || |||||||| ||||| || || ||| Sbjct: 587 aaaatcgatcctagcgtgaccatgatgactgtcgaagagaaacctgatgtaacttacaat 646 Query: 585 gatgttgg 592 |||||||| Sbjct: 647 gatgttgg 654
>gb|BT000069.1| Arabidopsis thaliana 26S proteasome ATPase subunit (At1g53750) mRNA, complete cds Length = 1323 Score = 174 bits (88), Expect = 2e-40 Identities = 298/368 (80%) Strand = Plus / Plus Query: 225 gccaagaggatcaatgacctttgtgggataaaggagtctgatactgggctagctccacct 284 ||||||| |||||| || || ||||| || ||||||||||||||||| ||||||| || Sbjct: 145 gccaagaagatcaacgatctatgtggtatcaaggagtctgatactggtttagctcctccc 204 Query: 285 agccagtgggatctagtgtcagacaaacagatgatgcaggaggagcagccactgcaagta 344 || || |||||||| || || || || || |||||||| || ||||| || ||||| || Sbjct: 205 agtcaatgggatcttgtatctgataagcaaatgatgcaagaagagcaacctctgcaggtt 264 Query: 345 gcaaggtgcaccaagattataaaccctaataccgacgatgccaaatacatgatcaatgta 404 || || ||||| |||||||||| || || || || || ||||||||| | || ||||| Sbjct: 265 gcgagatgcacaaagattataagtccaaacactgaagacgccaaatacgtcataaatgtc 324 Query: 405 aaacaaattgcaaagtttgttgttggattgggtgataaagtttccccaactgatattgag 464 ||||||||||| ||||||||||||||| | || ||||||||||| || |||||||||||| Sbjct: 325 aaacaaattgctaagtttgttgttggacttggcgataaagtttctcccactgatattgag 384 Query: 465 gaagggatgagagtcggtgttgatcggaacaagtaccagattcagattccgttgccaccg 524 ||||| ||| | || || ||||||||||| || || |||||||||||||| | || || Sbjct: 385 gaaggcatgcgtgttggagttgatcggaataaatatcagattcagattcctctacctccc 444 Query: 525 aagattgaccccagcgtcactatgatgacggttgaggagaaaccagatgtcacgtataat 584 || || || || ||||| || |||||||| || || |||||||| ||||| || || ||| Sbjct: 445 aaaatcgatcctagcgtgaccatgatgactgtcgaagagaaacctgatgtaacttacaat 504 Query: 585 gatgttgg 592 |||||||| Sbjct: 505 gatgttgg 512
>gb|AY062860.1| Arabidopsis thaliana 26S proteasome ATPase subunit (At1g53750; T18A20.1) mRNA, complete cds Length = 1579 Score = 174 bits (88), Expect = 2e-40 Identities = 298/368 (80%) Strand = Plus / Plus Query: 225 gccaagaggatcaatgacctttgtgggataaaggagtctgatactgggctagctccacct 284 ||||||| |||||| || || ||||| || ||||||||||||||||| ||||||| || Sbjct: 285 gccaagaagatcaacgatctatgtggtatcaaggagtctgatactggtttagctcctccc 344 Query: 285 agccagtgggatctagtgtcagacaaacagatgatgcaggaggagcagccactgcaagta 344 || || |||||||| || || || || || |||||||| || ||||| || ||||| || Sbjct: 345 agtcaatgggatcttgtatctgataagcaaatgatgcaagaagagcaacctctgcaggtt 404 Query: 345 gcaaggtgcaccaagattataaaccctaataccgacgatgccaaatacatgatcaatgta 404 || || ||||| |||||||||| || || || || || ||||||||| | || ||||| Sbjct: 405 gcgagatgcacaaagattataagtccaaacactgaagacgccaaatacgtcataaatgtc 464 Query: 405 aaacaaattgcaaagtttgttgttggattgggtgataaagtttccccaactgatattgag 464 ||||||||||| ||||||||||||||| | || ||||||||||| || |||||||||||| Sbjct: 465 aaacaaattgctaagtttgttgttggacttggcgataaagtttctcccactgatattgag 524 Query: 465 gaagggatgagagtcggtgttgatcggaacaagtaccagattcagattccgttgccaccg 524 ||||| ||| | || || ||||||||||| || || |||||||||||||| | || || Sbjct: 525 gaaggcatgcgtgttggagttgatcggaataaatatcagattcagattcctctacctccc 584 Query: 525 aagattgaccccagcgtcactatgatgacggttgaggagaaaccagatgtcacgtataat 584 || || || || ||||| || |||||||| || || |||||||| ||||| || || ||| Sbjct: 585 aaaatcgatcctagcgtgaccatgatgactgtcgaagagaaacctgatgtaacttacaat 644 Query: 585 gatgttgg 592 |||||||| Sbjct: 645 gatgttgg 652
>gb|AY089125.1| Arabidopsis thaliana clone 36419 mRNA, complete sequence Length = 1583 Score = 174 bits (88), Expect = 2e-40 Identities = 298/368 (80%) Strand = Plus / Plus Query: 225 gccaagaggatcaatgacctttgtgggataaaggagtctgatactgggctagctccacct 284 ||||||| |||||| || || ||||| || ||||||||||||||||| ||||||| || Sbjct: 285 gccaagaagatcaacgatctatgtggtatcaaggagtctgatactggtttagctcctccc 344 Query: 285 agccagtgggatctagtgtcagacaaacagatgatgcaggaggagcagccactgcaagta 344 || || |||||||| || || || || || |||||||| || ||||| || ||||| || Sbjct: 345 agtcaatgggatcttgtatctgataagcaaatgatgcaagaagagcaacctctgcaggtt 404 Query: 345 gcaaggtgcaccaagattataaaccctaataccgacgatgccaaatacatgatcaatgta 404 || || ||||| |||||||||| || || || || || ||||||||| | || ||||| Sbjct: 405 gcgagatgcacaaagattataagtccaaacactgaagacgccaaatacgtcataaatgtc 464 Query: 405 aaacaaattgcaaagtttgttgttggattgggtgataaagtttccccaactgatattgag 464 ||||||||||| ||||||||||||||| | || ||||||||||| || |||||||||||| Sbjct: 465 aaacaaattgctaagtttgttgttggacttggcgataaagtttctcccactgatattgag 524 Query: 465 gaagggatgagagtcggtgttgatcggaacaagtaccagattcagattccgttgccaccg 524 ||||| ||| | || || ||||||||||| || || |||||||||||||| | || || Sbjct: 525 gaaggcatgcgtgttggagttgatcggaataaatatcagattcagattcctctacctccc 584 Query: 525 aagattgaccccagcgtcactatgatgacggttgaggagaaaccagatgtcacgtataat 584 || || || || ||||| || |||||||| || || |||||||| ||||| || || ||| Sbjct: 585 aaaatcgatcctagcgtgaccatgatgactgtcgaagagaaacctgatgtaacttacaat 644 Query: 585 gatgttgg 592 |||||||| Sbjct: 645 gatgttgg 652
>gb|AF123390.1|AF123390 Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT1a (RPT1a) mRNA, complete cds Length = 1608 Score = 174 bits (88), Expect = 2e-40 Identities = 298/368 (80%) Strand = Plus / Plus Query: 225 gccaagaggatcaatgacctttgtgggataaaggagtctgatactgggctagctccacct 284 ||||||| |||||| || || ||||| || ||||||||||||||||| ||||||| || Sbjct: 284 gccaagaagatcaacgatctatgtggtatcaaggagtctgatactggtttagctcctccc 343 Query: 285 agccagtgggatctagtgtcagacaaacagatgatgcaggaggagcagccactgcaagta 344 || || |||||||| || || || || || |||||||| || ||||| || ||||| || Sbjct: 344 agtcaatgggatcttgtatctgataagcaaatgatgcaagaagagcaacctctgcaggtt 403 Query: 345 gcaaggtgcaccaagattataaaccctaataccgacgatgccaaatacatgatcaatgta 404 || || ||||| |||||||||| || || || || || ||||||||| | || ||||| Sbjct: 404 gcgagatgcacaaagattataagtccaaacactgaagacgccaaatacgtcataaatgtc 463 Query: 405 aaacaaattgcaaagtttgttgttggattgggtgataaagtttccccaactgatattgag 464 ||||||||||| ||||||||||||||| | || ||||||||||| || |||||||||||| Sbjct: 464 aaacaaattgctaagtttgttgttggacttggcgataaagtttctcccactgatattgag 523 Query: 465 gaagggatgagagtcggtgttgatcggaacaagtaccagattcagattccgttgccaccg 524 ||||| ||| | || || ||||||||||| || || |||||||||||||| | || || Sbjct: 524 gaaggcatgcgtgttggagttgatcggaataaatatcagattcagattcctctacctccc 583 Query: 525 aagattgaccccagcgtcactatgatgacggttgaggagaaaccagatgtcacgtataat 584 || || || || ||||| || |||||||| || || |||||||| ||||| || || ||| Sbjct: 584 aaaatcgatcctagcgtgaccatgatgactgtcgaagagaaacctgatgtaacttacaat 643 Query: 585 gatgttgg 592 |||||||| Sbjct: 644 gatgttgg 651
>emb|BX815777.1|CNS0ACY3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZD08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1472 Score = 168 bits (85), Expect = 1e-38 Identities = 313/389 (80%) Strand = Plus / Plus Query: 204 gagaaggagatcaaggagttggccaagaggatcaatgacctttgtgggataaaggagtct 263 ||||| ||||| ||||| | ||||||| |||||| || || ||||| || ||||||||| Sbjct: 185 gagaaagagattaaggatctcgccaagaagatcaacgatctatgtggtatcaaggagtct 244 Query: 264 gatactgggctagctccacctagccagtgggatctagtgtcagacaaacagatgatgcag 323 |||||||| ||||||| || || || |||||||| || || || || || |||||||| Sbjct: 245 gatactggtttagctcctcccagtcaatgggatcttgtatctgataagcaaatgatgcaa 304 Query: 324 gaggagcagccactgcaagtagcaaggtgcaccaagattataaaccctaataccgacgat 383 || ||||| || ||||| || || || ||||| |||||||| | || || || || || Sbjct: 305 gaagagcaacctctgcaggttgcgagatgcacaaagattatgagtccaaacactgaagac 364 Query: 384 gccaaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggtgataaa 443 ||||||||| | || ||||| ||||||||||| ||||||||||||||| | || |||||| Sbjct: 365 gccaaatacgtcataaatgtcaaacaaattgctaagtttgttgttggacttggcgataaa 424 Query: 444 gtttccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccag 503 ||||| || ||||||||||||||||| ||| | || || ||||||||||| || || ||| Sbjct: 425 gtttctcccactgatattgaggaaggcatgcgtgttggagttgatcggaataaatatcag 484 Query: 504 attcagattccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggag 563 ||||||||||| | || || ||| | || || ||||| || |||||||| || || ||| Sbjct: 485 attcagattcctctacctcccaaggtcgatcctagcgtgaccatgatgactgtcgaagag 544 Query: 564 aaaccagatgtcacgtataatgatgttgg 592 ||||| ||||| || || ||||||||||| Sbjct: 545 aaacctgatgtaacttacaatgatgttgg 573
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 141 bits (71), Expect = 3e-30 Identities = 86/91 (94%) Strand = Plus / Plus Query: 78 gccatggcgccggagccggaggacgacatcatggcggagaagaacccgcgccccctcgac 137 ||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||| Sbjct: 4678419 gccatggcgccggagcccgaggacgacatcatgaacgagaagaacccgcgcccgctcgac 4678478 Query: 138 gaggacgacatcgccctcctcaagacctacg 168 ||||||||||||||||||||||||||||||| Sbjct: 4678479 gaggacgacatcgccctcctcaagacctacg 4678509 Score = 99.6 bits (50), Expect = 1e-17 Identities = 95/110 (86%) Strand = Plus / Plus Query: 483 gttgatcggaacaagtaccagattcagattccgttgccaccgaagattgaccccagcgtc 542 |||||||| ||||||||||| ||||| ||||| |||||||| |||||||| |||||||| Sbjct: 4680273 gttgatcgaaacaagtaccaaattcaaattcctttgccaccaaagattgatcccagcgtt 4680332 Query: 543 actatgatgacggttgaggagaaaccagatgtcacgtataatgatgttgg 592 || |||||||| || || || ||||||||||| || || ||||||||||| Sbjct: 4680333 accatgatgactgtggaagaaaaaccagatgtgacttacaatgatgttgg 4680382 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 258 gagtctgatactgggctagctccacctagccagtgggatctagtgtcagacaaacagatg 317 |||||||| ||||| | |||||||||||||||||||| || || || || || |||||| Sbjct: 4679244 gagtctgacactggattggctccacctagccagtgggaccttgtatccgataagcagatg 4679303 Query: 318 atgcaggaggagcagccactgca 340 |||||||||||||| || ||||| Sbjct: 4679304 atgcaggaggagcaacccctgca 4679326 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 ccgccagcgcccgccgccga 71 |||||||||||||||||||| Sbjct: 6273146 ccgccagcgcccgccgccga 6273127
>dbj|AP004738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0090D06 Length = 174500 Score = 141 bits (71), Expect = 3e-30 Identities = 86/91 (94%) Strand = Plus / Plus Query: 78 gccatggcgccggagccggaggacgacatcatggcggagaagaacccgcgccccctcgac 137 ||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||| Sbjct: 165783 gccatggcgccggagcccgaggacgacatcatgaacgagaagaacccgcgcccgctcgac 165842 Query: 138 gaggacgacatcgccctcctcaagacctacg 168 ||||||||||||||||||||||||||||||| Sbjct: 165843 gaggacgacatcgccctcctcaagacctacg 165873 Score = 99.6 bits (50), Expect = 1e-17 Identities = 95/110 (86%) Strand = Plus / Plus Query: 483 gttgatcggaacaagtaccagattcagattccgttgccaccgaagattgaccccagcgtc 542 |||||||| ||||||||||| ||||| ||||| |||||||| |||||||| |||||||| Sbjct: 167637 gttgatcgaaacaagtaccaaattcaaattcctttgccaccaaagattgatcccagcgtt 167696 Query: 543 actatgatgacggttgaggagaaaccagatgtcacgtataatgatgttgg 592 || |||||||| || || || ||||||||||| || || ||||||||||| Sbjct: 167697 accatgatgactgtggaagaaaaaccagatgtgacttacaatgatgttgg 167746 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 258 gagtctgatactgggctagctccacctagccagtgggatctagtgtcagacaaacagatg 317 |||||||| ||||| | |||||||||||||||||||| || || || || || |||||| Sbjct: 166608 gagtctgacactggattggctccacctagccagtgggaccttgtatccgataagcagatg 166667 Query: 318 atgcaggaggagcagccactgca 340 |||||||||||||| || ||||| Sbjct: 166668 atgcaggaggagcaacccctgca 166690
>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0698A06 Length = 156514 Score = 141 bits (71), Expect = 3e-30 Identities = 86/91 (94%) Strand = Plus / Plus Query: 78 gccatggcgccggagccggaggacgacatcatggcggagaagaacccgcgccccctcgac 137 ||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||| Sbjct: 41018 gccatggcgccggagcccgaggacgacatcatgaacgagaagaacccgcgcccgctcgac 41077 Query: 138 gaggacgacatcgccctcctcaagacctacg 168 ||||||||||||||||||||||||||||||| Sbjct: 41078 gaggacgacatcgccctcctcaagacctacg 41108 Score = 99.6 bits (50), Expect = 1e-17 Identities = 95/110 (86%) Strand = Plus / Plus Query: 483 gttgatcggaacaagtaccagattcagattccgttgccaccgaagattgaccccagcgtc 542 |||||||| ||||||||||| ||||| ||||| |||||||| |||||||| |||||||| Sbjct: 42872 gttgatcgaaacaagtaccaaattcaaattcctttgccaccaaagattgatcccagcgtt 42931 Query: 543 actatgatgacggttgaggagaaaccagatgtcacgtataatgatgttgg 592 || |||||||| || || || ||||||||||| || || ||||||||||| Sbjct: 42932 accatgatgactgtggaagaaaaaccagatgtgacttacaatgatgttgg 42981 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 258 gagtctgatactgggctagctccacctagccagtgggatctagtgtcagacaaacagatg 317 |||||||| ||||| | |||||||||||||||||||| || || || || || |||||| Sbjct: 41843 gagtctgacactggattggctccacctagccagtgggaccttgtatccgataagcagatg 41902 Query: 318 atgcaggaggagcagccactgca 340 |||||||||||||| || ||||| Sbjct: 41903 atgcaggaggagcaacccctgca 41925
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 78 gccatggcgccggagccggaggacgacatcatggcggagaagaacccgcgccccctcgac 137 |||||||||||||||||||| |||||||||||| ||||||||||| ||||| |||||| Sbjct: 33337608 gccatggcgccggagccggaagacgacatcatgaacgagaagaacccccgcccgctcgac 33337549 Query: 138 gaggacgacatcgccctcctcaagacctacg 168 |||||||||||||| |||||||||||||||| Sbjct: 33337548 gaggacgacatcgctctcctcaagacctacg 33337518 Score = 113 bits (57), Expect = 7e-22 Identities = 96/109 (88%) Strand = Plus / Minus Query: 481 gtgttgatcggaacaagtaccagattcagattccgttgccaccgaagattgaccccagcg 540 |||||||||||||||||||||||||||| ||||| |||||||| || |||||||| || | Sbjct: 33335552 gtgttgatcggaacaagtaccagattcaaattcctttgccacccaaaattgacccaagtg 33335493 Query: 541 tcactatgatgacggttgaggagaaaccagatgtcacgtataatgatgt 589 | || |||||||| |||||||| ||||| ||||| || ||||||||||| Sbjct: 33335492 ttaccatgatgacagttgaggaaaaacctgatgtgacatataatgatgt 33335444 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Minus Query: 249 gggataaaggagtctgatactgggctagctccacctagccagtgggatctagtgtcagac 308 ||||| ||||||||||| |||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 33336609 gggattaaggagtctgacactgggctggcaccacccagccaatgggatctagtatcagat 33336550 Query: 309 aaacagatgatgcaggaggagcagccactgcaagta 344 || ||||||||||| || ||||| || ||||||||| Sbjct: 33336549 aagcagatgatgcaagaagagcaaccgctgcaagta 33336514 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 348 aggtgcaccaagattataaaccctaataccgacgatgccaaatacatgatcaatgtaaaa 407 ||||| ||||||||||||| |||||||| || ||||| ||||| |||| ||||||||| Sbjct: 33336353 aggtgtaccaagattataagtcctaatactgatgatgctaaatatgtgattaatgtaaaa 33336294 Query: 408 caaattgcaaag 419 |||||||||||| Sbjct: 33336293 caaattgcaaag 33336282 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 438 gataaagtttccccaactgatattgaggaagggatgagagt 478 ||||||||||| |||||||| |||||||||||||||||||| Sbjct: 33336170 gataaagtttctccaactgacattgaggaagggatgagagt 33336130 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 168 gggcttgggccatactccacgagcatcaagacggccgagaaggagatcaaggagttggcc 227 |||||||||||||||||||| ||||| |||| || ||||| || || || || |||| Sbjct: 33337167 gggcttgggccatactccacaagcattaagaaggtggagaaagaaataaaagaaatggct 33337108 Query: 228 aagaggatcaatgacctttgtgg 250 |||| |||||||||||||||||| Sbjct: 33337107 aagaagatcaatgacctttgtgg 33337085
>dbj|AP004095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1715_H01 Length = 138733 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 78 gccatggcgccggagccggaggacgacatcatggcggagaagaacccgcgccccctcgac 137 |||||||||||||||||||| |||||||||||| ||||||||||| ||||| |||||| Sbjct: 78358 gccatggcgccggagccggaagacgacatcatgaacgagaagaacccccgcccgctcgac 78299 Query: 138 gaggacgacatcgccctcctcaagacctacg 168 |||||||||||||| |||||||||||||||| Sbjct: 78298 gaggacgacatcgctctcctcaagacctacg 78268 Score = 113 bits (57), Expect = 7e-22 Identities = 96/109 (88%) Strand = Plus / Minus Query: 481 gtgttgatcggaacaagtaccagattcagattccgttgccaccgaagattgaccccagcg 540 |||||||||||||||||||||||||||| ||||| |||||||| || |||||||| || | Sbjct: 76302 gtgttgatcggaacaagtaccagattcaaattcctttgccacccaaaattgacccaagtg 76243 Query: 541 tcactatgatgacggttgaggagaaaccagatgtcacgtataatgatgt 589 | || |||||||| |||||||| ||||| ||||| || ||||||||||| Sbjct: 76242 ttaccatgatgacagttgaggaaaaacctgatgtgacatataatgatgt 76194 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Minus Query: 249 gggataaaggagtctgatactgggctagctccacctagccagtgggatctagtgtcagac 308 ||||| ||||||||||| |||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 77359 gggattaaggagtctgacactgggctggcaccacccagccaatgggatctagtatcagat 77300 Query: 309 aaacagatgatgcaggaggagcagccactgcaagta 344 || ||||||||||| || ||||| || ||||||||| Sbjct: 77299 aagcagatgatgcaagaagagcaaccgctgcaagta 77264 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 348 aggtgcaccaagattataaaccctaataccgacgatgccaaatacatgatcaatgtaaaa 407 ||||| ||||||||||||| |||||||| || ||||| ||||| |||| ||||||||| Sbjct: 77103 aggtgtaccaagattataagtcctaatactgatgatgctaaatatgtgattaatgtaaaa 77044 Query: 408 caaattgcaaag 419 |||||||||||| Sbjct: 77043 caaattgcaaag 77032 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 438 gataaagtttccccaactgatattgaggaagggatgagagt 478 ||||||||||| |||||||| |||||||||||||||||||| Sbjct: 76920 gataaagtttctccaactgacattgaggaagggatgagagt 76880 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 168 gggcttgggccatactccacgagcatcaagacggccgagaaggagatcaaggagttggcc 227 |||||||||||||||||||| ||||| |||| || ||||| || || || || |||| Sbjct: 77917 gggcttgggccatactccacaagcattaagaaggtggagaaagaaataaaagaaatggct 77858 Query: 228 aagaggatcaatgacctttgtgg 250 |||| |||||||||||||||||| Sbjct: 77857 aagaagatcaatgacctttgtgg 77835
>gb|AC135796.25| Medicago truncatula clone mth2-28b18, complete sequence Length = 118959 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 255 aaggagtctgatactgggctagctccacctagccagtgggatctagtgtcagacaaacag 314 ||||||||||||||||| ||||| |||| |||||||||||||| || || |||||||| Sbjct: 57806 aaggagtctgatactggtttagctgcaccaagccagtgggatcttgtttctgacaaacaa 57747 Query: 315 atgatgcaggaggagcagcc 334 |||||||||||||||||||| Sbjct: 57746 atgatgcaggaggagcagcc 57727 Score = 95.6 bits (48), Expect = 2e-16 Identities = 96/112 (85%) Strand = Plus / Minus Query: 481 gtgttgatcggaacaagtaccagattcagattccgttgccaccgaagattgaccccagcg 540 |||||||| | ||||| ||||||||||||||||| ||||| || |||||||| || || | Sbjct: 57216 gtgttgatagaaacaaataccagattcagattcctttgcctccaaagattgatcctagtg 57157 Query: 541 tcactatgatgacggttgaggagaaaccagatgtcacgtataatgatgttgg 592 | || |||||||| ||||| |||||||| ||||| || |||||||||||||| Sbjct: 57156 ttacaatgatgacagttgaagagaaaccggatgtgacatataatgatgttgg 57105 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 114 gagaagaacccgcgccccctcgacgaggacgacatcgccctcctcaagacctacg 168 ||||||||||| |||||||| |||||||| || ||||| |||||||| ||||||| Sbjct: 59024 gagaagaaccctcgcccccttgacgaggatgatatcgctctcctcaaaacctacg 58970
>emb|CR723313.2|CNS0GL1Z Tetraodon nigroviridis full-length cDNA Length = 1418 Score = 91.7 bits (46), Expect = 2e-15 Identities = 211/266 (79%) Strand = Plus / Plus Query: 327 gagcagccactgcaagtagcaaggtgcaccaagattataaaccctaataccgacgatgcc 386 |||||||| |||||||||||||| ||||| ||||| || ||| | | |||| || || Sbjct: 326 gagcagcccctgcaagtagcaagatgcacaaagatcattaacgccgactccgaggacccc 385 Query: 387 aaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggtgataaagtt 446 |||||||| |||||||| ||||| ||||||||||||| || | || | ||| |||| Sbjct: 386 aaatacatcatcaatgtcaaacagtttgcaaagtttgtggtggacctgagcgatcaagta 445 Query: 447 tccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagatt 506 | |||||||| ||||| || || |||||||| |||||||| | ||||| || |||||| Sbjct: 446 gctccaactgacattgaagagggaatgagagttggtgttgacagaaacaaatatcagatt 505 Query: 507 cagattccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaa 566 || ||||| |||| || ||||| ||||| | |||||||||||| ||| ||||| || Sbjct: 506 cacattcctctgcctcccaagatcgacccaacggtcactatgatgcgggtagaggaaaag 565 Query: 567 ccagatgtcacgtataatgatgttgg 592 |||||||| || |||| ||||||||| Sbjct: 566 ccagatgtgacctatagtgatgttgg 591
>emb|CR699571.2|CNS0G2QN Tetraodon nigroviridis full-length cDNA Length = 1445 Score = 91.7 bits (46), Expect = 2e-15 Identities = 211/266 (79%) Strand = Plus / Plus Query: 327 gagcagccactgcaagtagcaaggtgcaccaagattataaaccctaataccgacgatgcc 386 |||||||| |||||||||||||| ||||| ||||| || ||| | | |||| || || Sbjct: 355 gagcagcccctgcaagtagcaagatgcacaaagatcattaacgccgactccgaggacccc 414 Query: 387 aaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggtgataaagtt 446 |||||||| |||||||| ||||| ||||||||||||| || | || | ||| |||| Sbjct: 415 aaatacatcatcaatgtcaaacagtttgcaaagtttgtggtggacctgagcgatcaagta 474 Query: 447 tccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagatt 506 | |||||||| ||||| || || |||||||| |||||||| | ||||| || |||||| Sbjct: 475 gctccaactgacattgaagagggaatgagagttggtgttgacagaaacaaatatcagatt 534 Query: 507 cagattccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaa 566 || ||||| |||| || ||||| ||||| | |||||||||||| ||| ||||| || Sbjct: 535 cacattcctctgcctcccaagatcgacccaacggtcactatgatgcaggtagaggaaaag 594 Query: 567 ccagatgtcacgtataatgatgttgg 592 |||||||| || |||| ||||||||| Sbjct: 595 ccagatgtgacctatagtgatgttgg 620
>emb|CR695279.1|CNS0FZFF Tetraodon nigroviridis full-length cDNA Length = 1357 Score = 91.7 bits (46), Expect = 2e-15 Identities = 211/266 (79%) Strand = Plus / Plus Query: 327 gagcagccactgcaagtagcaaggtgcaccaagattataaaccctaataccgacgatgcc 386 |||||||| |||||||||||||| ||||| ||||| || ||| | | |||| || || Sbjct: 294 gagcagcccctgcaagtagcaagatgcacaaagatcattaacgccgactccgaggacccc 353 Query: 387 aaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggtgataaagtt 446 |||||||| |||||||| ||||| ||||||||||||| || | || | ||| |||| Sbjct: 354 aaatacatcatcaatgtcaaacagtttgcaaagtttgtggtggacctgagcgatcaagta 413 Query: 447 tccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagatt 506 | |||||||| ||||| || || |||||||| |||||||| | ||||| || |||||| Sbjct: 414 gctccaactgacattgaagagggaatgagagttggtgttgacagaaacaaatatcagatt 473 Query: 507 cagattccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaa 566 || ||||| |||| || ||||| ||||| | |||||||||||| ||| ||||| || Sbjct: 474 cacattcctctgcctcccaagatcgacccaacggtcactatgatgcaggtagaggaaaag 533 Query: 567 ccagatgtcacgtataatgatgttgg 592 |||||||| || |||| ||||||||| Sbjct: 534 ccagatgtgacctatagtgatgttgg 559
>emb|CR690805.2|CNS0FVZ5 Tetraodon nigroviridis full-length cDNA Length = 1441 Score = 91.7 bits (46), Expect = 2e-15 Identities = 211/266 (79%) Strand = Plus / Plus Query: 327 gagcagccactgcaagtagcaaggtgcaccaagattataaaccctaataccgacgatgcc 386 |||||||| |||||||||||||| ||||| ||||| || ||| | | |||| || || Sbjct: 349 gagcagcccctgcaagtagcaagatgcacaaagatcattaacgccgactccgaggacccc 408 Query: 387 aaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggtgataaagtt 446 |||||||| |||||||| ||||| ||||||||||||| || | || | ||| |||| Sbjct: 409 aaatacatcatcaatgtcaaacagtttgcaaagtttgtggtggacctgagcgatcaagta 468 Query: 447 tccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagatt 506 | |||||||| ||||| || || |||||||| |||||||| | ||||| || |||||| Sbjct: 469 gctccaactgacattgaagagggaatgagagttggtgttgacagaaacaaatatcagatt 528 Query: 507 cagattccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaa 566 || ||||| |||| || ||||| ||||| | |||||||||||| ||| ||||| || Sbjct: 529 cacattcctctgcctcccaagatcgacccaacggtcactatgatgcaggtggaggaaaag 588 Query: 567 ccagatgtcacgtataatgatgttgg 592 |||||||| || |||| ||||||||| Sbjct: 589 ccagatgtgacctatagtgatgttgg 614
>emb|CR685098.1|CNS0FRKM Tetraodon nigroviridis full-length cDNA Length = 1416 Score = 91.7 bits (46), Expect = 2e-15 Identities = 211/266 (79%) Strand = Plus / Plus Query: 327 gagcagccactgcaagtagcaaggtgcaccaagattataaaccctaataccgacgatgcc 386 |||||||| |||||||||||||| ||||| ||||| || ||| | | |||| || || Sbjct: 324 gagcagcccctgcaagtagcaagatgcacaaagatcattaacgccgactccgaggacccc 383 Query: 387 aaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggtgataaagtt 446 |||||||| |||||||| ||||| ||||||||||||| || | || | ||| |||| Sbjct: 384 aaatacatcatcaatgtcaaacagtttgcaaagtttgtggtggacctgagcgatcaagta 443 Query: 447 tccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagatt 506 | |||||||| ||||| || || |||||||| |||||||| | ||||| || |||||| Sbjct: 444 gctccaactgacattgaagagggaatgagagttggtgttgacagaaacaaatatcagatt 503 Query: 507 cagattccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaa 566 || ||||| |||| || ||||| ||||| | |||||||||||| ||| ||||| || Sbjct: 504 cacattcctctgcctcccaagatcgacccaacggtcactatgatgcaggtagaggaaaag 563 Query: 567 ccagatgtcacgtataatgatgttgg 592 |||||||| || |||| ||||||||| Sbjct: 564 ccagatgtgacctatagtgatgttgg 589
>emb|CR664754.2|CNS0FBW8 Tetraodon nigroviridis full-length cDNA Length = 1423 Score = 91.7 bits (46), Expect = 2e-15 Identities = 211/266 (79%) Strand = Plus / Plus Query: 327 gagcagccactgcaagtagcaaggtgcaccaagattataaaccctaataccgacgatgcc 386 |||||||| |||||||||||||| ||||| ||||| || ||| | | |||| || || Sbjct: 344 gagcagcccctgcaagtagcaagatgcacaaagatcattaacgccgactccgaggacccc 403 Query: 387 aaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggtgataaagtt 446 |||||||| |||||||| ||||| ||||||||||||| || | || | ||| |||| Sbjct: 404 aaatacatcatcaatgtcaaacagtttgcaaagtttgtggtggacctgagcgatcaagta 463 Query: 447 tccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagatt 506 | |||||||| ||||| || || |||||||| |||||||| | ||||| || |||||| Sbjct: 464 gctccaactgacattgaagagggaatgagagttggtgttgacagaaacaaatatcagatt 523 Query: 507 cagattccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaa 566 || ||||| |||| || ||||| ||||| | |||||||||||| ||| ||||| || Sbjct: 524 cacattcctctgcctcccaagatcgacccaacggtcactatgatgcaggtagaggaaaag 583 Query: 567 ccagatgtcacgtataatgatgttgg 592 |||||||| || |||| ||||||||| Sbjct: 584 ccagatgtgacctatagtgatgttgg 609
>dbj|AP006733.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02K14, TM0918b, complete sequence Length = 41851 Score = 91.7 bits (46), Expect = 2e-15 Identities = 94/110 (85%) Strand = Plus / Minus Query: 483 gttgatcggaacaagtaccagattcagattccgttgccaccgaagattgaccccagcgtc 542 |||||| |||||||||| |||||||||||||| ||||| || || |||||||| || || Sbjct: 41207 gttgataggaacaagtatcagattcagattccattgcctccaaaaattgacccaagtgtt 41148 Query: 543 actatgatgacggttgaggagaaaccagatgtcacgtataatgatgttgg 592 || |||||||| ||||| ||||| || ||||| || |||||||||||||| Sbjct: 41147 accatgatgacagttgaagagaagcctgatgtgacatataatgatgttgg 41098 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 255 aaggagtctgatactgggctagctccacctagccagtgggatctagtgtcagacaaacag 314 |||||||||||||| || | ||| |||| |||||||||||||| || || || ||||| Sbjct: 41692 aaggagtctgataccggtttggctgcacccagccagtgggatcttgtatctgataaacaa 41633 Query: 315 atgatgcaggaggagcagcc 334 |||||||||||||||||||| Sbjct: 41632 atgatgcaggaggagcagcc 41613 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 418 agtttgttgttggattgggtgataaagtttccccaactgatattgaggaagggatg 473 ||||||||||||| ||||||| ||||||||||| ||||| || |||||||||||| Sbjct: 41377 agtttgttgttgggctgggtgacaaagtttcccccactgacatagaggaagggatg 41322
>ref|XM_637738.1| Dictyostelium discoideum hypothetical protein (DDB0168337), partial mRNA Length = 1287 Score = 87.7 bits (44), Expect = 4e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 405 aaacaaattgcaaagtttgttgttggattgggtgataaagtttccccaactgatattgag 464 ||||||||||||||||||||||||| ||| ||||||||| | || ||||||||| |||| Sbjct: 331 aaacaaattgcaaagtttgttgttgcattaggtgataaattatcaccaactgatgttgaa 390 Query: 465 gaagggatgagagtcggtgttgatcggaacaagtaccagattcagattccgttgccaccg 524 ||||| || | || ||||||||| | || || || || ||||| ||||| |||||||| Sbjct: 391 gaaggtattcgtgttggtgttgatagaaataaatatcaaattcaaattccattgccacca 450 Query: 525 aagattga 532 |||||||| Sbjct: 451 aagattga 458
>emb|CR683769.2|CNS0FQJP Tetraodon nigroviridis full-length cDNA Length = 1407 Score = 85.7 bits (43), Expect = 2e-13 Identities = 213/267 (79%), Gaps = 2/267 (0%) Strand = Plus / Plus Query: 327 gagcagccactgcaagtagcaaggtgcaccaagattat-aaaccctaataccgacgatgc 385 |||||||| |||||||||||||| ||||| ||||| || ||| || | | |||| || | Sbjct: 333 gagcagcccctgcaagtagcaagatgcacaaagatcattaaagccgact-ccgaggaccc 391 Query: 386 caaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggtgataaagt 445 ||||||||| |||||||| ||||| ||||||||||||| || | || | ||| |||| Sbjct: 392 caaatacatcatcaatgtcaaacagtttgcaaagtttgtggtggacctgagcgatcaagt 451 Query: 446 ttccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagat 505 | |||||||| ||||| || || |||||||| |||||||| | ||||| || ||||| Sbjct: 452 agctccaactgacattgaagagggaatgagagttggtgttgacagaaacaaatatcagat 511 Query: 506 tcagattccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaa 565 ||| ||||| |||| || ||||| ||||| | |||||||||||| ||| ||||| || Sbjct: 512 tcacattcctctgcctcccaagatcgacccaacggtcactatgatgcaggtggaggaaaa 571 Query: 566 accagatgtcacgtataatgatgttgg 592 |||||||| || |||| ||||||||| Sbjct: 572 gccagatgtgacctatagtgatgttgg 598
>emb|CR697578.2|CNS0G17A Tetraodon nigroviridis full-length cDNA Length = 1408 Score = 83.8 bits (42), Expect = 6e-13 Identities = 210/266 (78%) Strand = Plus / Plus Query: 327 gagcagccactgcaagtagcaaggtgcaccaagattataaaccctaataccgacgatgcc 386 |||||||| |||||||||||||| ||||| ||||| || ||| | | |||| || || Sbjct: 320 gagcagcccctgcaagtagcaagatgcacaaagatcattaacgccgactccgaggacccc 379 Query: 387 aaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggtgataaagtt 446 |||||||| |||||||| ||||| ||||||||||||| || | || | ||| |||| Sbjct: 380 aaatacatcatcaatgtcaaacagtttgcaaagtttgtggtggacctgagcgatcaagta 439 Query: 447 tccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagatt 506 | |||||||| ||||| | || |||||||| |||||||| | ||||| || |||||| Sbjct: 440 gctccaactgacattgaaaagggaatgagagttggtgttgacagaaacaaatatcagatt 499 Query: 507 cagattccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaa 566 || ||||| |||| || ||||| ||||| | |||||||||||| ||| ||||| || Sbjct: 500 cacattcctctgcctcccaagatcgacccaacggtcactatgatgcaggtggaggaaaag 559 Query: 567 ccagatgtcacgtataatgatgttgg 592 |||||||| || |||| ||||||||| Sbjct: 560 ccagatgtgacctatagtgatgttgg 585
>emb|CR682079.2|CNS0FP8R Tetraodon nigroviridis full-length cDNA Length = 1422 Score = 83.8 bits (42), Expect = 6e-13 Identities = 211/266 (79%), Gaps = 1/266 (0%) Strand = Plus / Plus Query: 327 gagcagccactgcaagtagcaaggtgcaccaagattataaaccctaataccgacgatgcc 386 |||||||| |||||||||||||| ||||| ||||| || ||| | | |||| || || Sbjct: 331 gagcagcccctgcaagtagcaagatgcacaaagatcattaacgccgactccgaggacccc 390 Query: 387 aaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggtgataaagtt 446 |||||||| |||||||| ||||| ||||||||||||| || ||| | ||| |||| Sbjct: 391 aaatacatcatcaatgtcaaacagtttgcaaagtttgtggt-ggacctagcgatcaagta 449 Query: 447 tccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagatt 506 | |||||||| ||||| || || |||||||| |||||||| | ||||| || |||||| Sbjct: 450 gctccaactgacattgaagagggaatgagagttggtgttgacagaaacaaatatcagatt 509 Query: 507 cagattccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaa 566 || ||||| |||| || ||||| ||||| | |||||||||||| ||| ||||| || Sbjct: 510 cacattcctctgcctcccaagatcgacccaacggtcactatgatgcaggtagaggaaaag 569 Query: 567 ccagatgtcacgtataatgatgttgg 592 |||||||| || |||| ||||||||| Sbjct: 570 ccagatgtgacctatagtgatgttgg 595
>emb|CR675711.2|CNS0FKCL Tetraodon nigroviridis full-length cDNA Length = 1443 Score = 83.8 bits (42), Expect = 6e-13 Identities = 210/266 (78%) Strand = Plus / Plus Query: 327 gagcagccactgcaagtagcaaggtgcaccaagattataaaccctaataccgacgatgcc 386 |||||||| |||||||||||||| ||||| ||||| || ||| | | |||| || || Sbjct: 351 gagcagcccctgcaagtagcaagatgcacaaagatcattaacgccgactccgaggacccc 410 Query: 387 aaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggtgataaagtt 446 |||||||| |||||||| ||||| ||||||||||||| || | || | ||| |||| Sbjct: 411 aaatacatcatcaatgtcaaacagtttgcaaagtttgtggtggacctgagcgatcaagta 470 Query: 447 tccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagatt 506 | |||||||| ||||| || || |||||||| |||||||| | ||||| || |||||| Sbjct: 471 gctccaactgacattgaagagggaatgagagttggtgttgacagaaacaaatatcagatt 530 Query: 507 cagattccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaa 566 || ||||| |||| || ||||| ||||| | | |||||||||| ||| ||||| || Sbjct: 531 cacattcctctgcctcccaagatcgacccaacggccactatgatgcaggtagaggaaaag 590 Query: 567 ccagatgtcacgtataatgatgttgg 592 |||||||| || |||| ||||||||| Sbjct: 591 ccagatgtgacctatagtgatgttgg 616
>emb|BX538352.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 3/4 Length = 293050 Score = 83.8 bits (42), Expect = 6e-13 Identities = 123/150 (82%) Strand = Plus / Plus Query: 387 aaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggtgataaagtt 446 ||||| |||||||| | |||||||| || |||| ||| |||||| | || ||||||||| Sbjct: 290951 aaatatatgatcaacattaaacaaatggccaagtatgtagttggactaggagataaagtt 291010 Query: 447 tccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagatt 506 | ||||||||||| || ||||| |||||||| ||||||||||| | |||||| ||||| Sbjct: 291011 gctccaactgatatagaagaaggaatgagagtaggtgttgatcgtaccaagtataagatt 291070 Query: 507 cagattccgttgccaccgaagattgacccc 536 ||||| || || ||||| || || |||||| Sbjct: 291071 cagatacctttaccaccaaaaatagacccc 291100
>ref|XM_627766.1| Cryptosporidium parvum Iowa II 26S proteasome regulatory subunit 7 (RPT1)-like. AAA atpase (cgd6_4350), partial mRNA Length = 1299 Score = 83.8 bits (42), Expect = 6e-13 Identities = 123/150 (82%) Strand = Plus / Plus Query: 387 aaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggtgataaagtt 446 ||||| |||||||| | |||||||| || |||| ||| |||||| | || ||||||||| Sbjct: 325 aaatatatgatcaacattaaacaaatggccaagtatgtagttggactaggagataaagtt 384 Query: 447 tccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagatt 506 | ||||||||||| || ||||| |||||||| ||||||||||| | |||||| ||||| Sbjct: 385 gctccaactgatatagaagaaggaatgagagtaggtgttgatcgtaccaagtataagatt 444 Query: 507 cagattccgttgccaccgaagattgacccc 536 ||||| || || ||||| || || |||||| Sbjct: 445 cagatacctttaccaccaaaaatagacccc 474
>ref|XM_660980.1| Cryptosporidium hominis TU502 26S proteasome ATPase subunit (Chro.60498) partial mRNA Length = 1299 Score = 81.8 bits (41), Expect = 2e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 387 aaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggtgataaagtt 446 ||||| |||||||| | |||||||| || |||| ||| |||||| | || ||||||||| Sbjct: 325 aaatatatgatcaacattaaacaaatggccaagtatgtagttggactaggagataaagtt 384 Query: 447 tccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagatt 506 | ||||||||||| || ||||| |||||||| ||||||||||| | |||||| ||||| Sbjct: 385 gctccaactgatatagaagaaggaatgagagtaggtgttgatcgtaccaagtataagatt 444 Query: 507 cagat 511 ||||| Sbjct: 445 cagat 449
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 527 gattgaccccagcgtcactatgatgacggttgaggagaaaccagatgtcacgtat 581 |||||||||||| || |||||||||||||| ||||||||||||||||| |||||| Sbjct: 448055 gattgaccccagtgtgactatgatgacggtggaggagaaaccagatgtgacgtat 448001
>ref|NM_208806.1| Eremothecium gossypii ACR050Cp (ACR050C), mRNA Length = 1428 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 527 gattgaccccagcgtcactatgatgacggttgaggagaaaccagatgtcacgtat 581 |||||||||||| || |||||||||||||| ||||||||||||||||| |||||| Sbjct: 594 gattgaccccagtgtgactatgatgacggtggaggagaaaccagatgtgacgtat 648
>gb|BC054143.1| Xenopus laevis xMSS1 protein, mRNA (cDNA clone MGC:64244 IMAGE:6872349), complete cds Length = 1492 Score = 75.8 bits (38), Expect = 1e-10 Identities = 164/206 (79%) Strand = Plus / Plus Query: 387 aaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggtgataaagtt 446 |||||||| || |||||||||||| |||| |||||||| || | | |||| ||||| Sbjct: 406 aaatacattattaatgtaaaacaatttgctaagtttgtagtagacctcagtgaccaagtt 465 Query: 447 tccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagatt 506 | || ||||||||||| || || |||||||| |||||||| ||||||| ||||||||| Sbjct: 466 gctcctactgatattgaagagggtatgagagttggtgttgacaggaacaaataccagatt 525 Query: 507 cagattccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaa 566 || || || | || || ||||||||||||| || || |||||| ||| ||||||||| Sbjct: 526 cacatccctctccctccaaagattgaccccacagtaacaatgatgcaggtagaggagaaa 585 Query: 567 ccagatgtcacgtataatgatgttgg 592 || ||||| || |||| |||||||| Sbjct: 586 cctgatgtgacatatagcgatgttgg 611
>emb|X80157.1|XLMSS1R X.laevis xMSS1 mRNA Length = 1537 Score = 75.8 bits (38), Expect = 1e-10 Identities = 164/206 (79%) Strand = Plus / Plus Query: 387 aaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggtgataaagtt 446 |||||||| || |||||||||||| |||| |||||||| || | | |||| ||||| Sbjct: 439 aaatacattattaatgtaaaacaatttgctaagtttgtagtagacctcagtgaccaagtt 498 Query: 447 tccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagatt 506 | || ||||||||||| || || |||||||| |||||||| ||||||| ||||||||| Sbjct: 499 gctcctactgatattgaagagggtatgagagttggtgttgacaggaacaaataccagatt 558 Query: 507 cagattccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaa 566 || || || | || || ||||||||||||| || || |||||| ||| ||||||||| Sbjct: 559 cacatccctctccctccaaagattgaccccacagtaacaatgatgcaggtagaggagaaa 618 Query: 567 ccagatgtcacgtataatgatgttgg 592 || ||||| || |||| |||||||| Sbjct: 619 cctgatgtgacatatagcgatgttgg 644
>dbj|AK113906.1| Ciona intestinalis cDNA, clone:cicl016d12, full insert sequence Length = 1560 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 448 ccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattc 507 ||||||||||||| || || || ||||| ||||| || |||||||| || |||||||| | Sbjct: 417 ccccaactgatatagaagagggtatgagggtcggggtagatcggaataaataccagatcc 476 Query: 508 agattccgttgccaccgaagattgacccca 537 | |||||| |||| |||||||||||||||| Sbjct: 477 atattccgctgcccccgaagattgacccca 506
>ref|XM_789501.1| PREDICTED: Strongylocentrotus purpuratus similar to 26S protease regulatory subunit 7 (MSS1 protein) (LOC589870), mRNA Length = 1239 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 471 atgagagtcggtgttgatcggaacaagtaccagattcagattccgttgccaccgaagatt 530 ||||| ||||| |||||||| ||||||||||||||||| ||||| ||||||| |||||| Sbjct: 349 atgagggtcggggttgatcgtaacaagtaccagattcacattccactgccacccaagatt 408 Query: 531 gaccc 535 ||||| Sbjct: 409 gaccc 413
>gb|AC116987.2| Dictyostelium discoideum chromosome 2 map 3527441-3568052 strain AX4, complete sequence Length = 40611 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 405 aaacaaattgcaaagtttgttgttggattgggtgataaagtttccccaactgatattgag 464 ||||||||||||||||||||||||| ||| ||||||||| | || ||||||||| |||| Sbjct: 38322 aaacaaattgcaaagtttgttgttgcattaggtgataaattatcaccaactgatgttgaa 38381 Query: 465 gaagg 469 ||||| Sbjct: 38382 gaagg 38386
>gb|AY814884.1| Schistosoma japonicum SJCHGC09284 protein mRNA, complete cds Length = 1558 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Plus Query: 450 ccaactgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcag 509 ||||||||||||||||| |||||| | || || |||||||| | || |||||||| || Sbjct: 456 ccaactgatattgaggaggggatgcgtgttggggttgatcgcactaaataccagatccac 515 Query: 510 attccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaacca 569 ||||| || || || || || || || ||||| ||||||||| ||| ||||| |||||| Sbjct: 516 attcctttacctccaaaaatcgatccgagcgtaactatgatgcaggtggaggataaacca 575 Query: 570 gatgtcacgta 580 ||||||||||| Sbjct: 576 gatgtcacgta 586
>emb|CR666416.2|CNS0FD6E Tetraodon nigroviridis full-length cDNA Length = 1329 Score = 69.9 bits (35), Expect = 9e-09 Identities = 116/143 (81%) Strand = Plus / Plus Query: 450 ccaactgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcag 509 |||||||| ||||| || || |||||||| |||||||| | ||||| || |||||||| Sbjct: 359 ccaactgacattgaagagggaatgagagttggtgttgacagaaacaaatatcagattcac 418 Query: 510 attccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaacca 569 ||||| |||| || ||||| ||||| | |||||||||||| ||| ||||| || ||| Sbjct: 419 attcctctgcctcccaagatcgacccaacggtcactatgatgcaggtagaggaaaagcca 478 Query: 570 gatgtcacgtataatgatgttgg 592 ||||| || |||| ||||||||| Sbjct: 479 gatgtgacctatagtgatgttgg 501
>gb|BC041186.1| Xenopus laevis cDNA clone IMAGE:4681581, partial cds Length = 1449 Score = 67.9 bits (34), Expect = 4e-08 Identities = 163/206 (79%) Strand = Plus / Plus Query: 387 aaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggtgataaagtt 446 |||||||| || |||||||||||| | || |||||||| || | | ||||| ||||| Sbjct: 362 aaatacattattaatgtaaaacaattcgctaagtttgtggtagacctcagtgatcaagtt 421 Query: 447 tccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagatt 506 | || ||||||||||| || || |||||||| |||||||| ||||||| ||||||||| Sbjct: 422 gctcctactgatattgaagagggaatgagagttggtgttgacaggaacaaataccagatt 481 Query: 507 cagattccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaa 566 || || || | || || |||||||| |||| || || |||||| ||| ||||||||| Sbjct: 482 catatccctcttcctccaaagattgatcccacagtaacaatgatgcaggtagaggagaaa 541 Query: 567 ccagatgtcacgtataatgatgttgg 592 || ||||| || |||| |||||||| Sbjct: 542 cctgatgtgacatatagcgatgttgg 567
>gb|BC061627.1| Xenopus tropicalis 26S protease regulatory subunit 7, mRNA (cDNA clone MGC:76296 IMAGE:5379538), complete cds Length = 1418 Score = 65.9 bits (33), Expect = 1e-07 Identities = 126/157 (80%) Strand = Plus / Plus Query: 436 gtgataaagtttccccaactgatattgaggaagggatgagagtcggtgttgatcggaaca 495 ||||| ||||| | || ||||| ||||| || || ||||||||||||||||| |||||| Sbjct: 391 gtgatcaagttgctcctactgacattgaagagggtatgagagtcggtgttgacaggaaca 450 Query: 496 agtaccagattcagattccgttgccaccgaagattgaccccagcgtcactatgatgacgg 555 | ||||||||||| || || | || || |||||||| |||| || || |||||| || Sbjct: 451 aataccagattcatatccctcttcctccaaagattgatcccactgtaacaatgatgcagg 510 Query: 556 ttgaggagaaaccagatgtcacgtataatgatgttgg 592 | ||||||||||| ||||| || || | ||||||||| Sbjct: 511 tagaggagaaacctgatgtaacatacagtgatgttgg 547
>ref|NM_203824.1| Xenopus tropicalis 26S protease regulatory subunit 7 (MGC76296), mRNA Length = 1418 Score = 65.9 bits (33), Expect = 1e-07 Identities = 126/157 (80%) Strand = Plus / Plus Query: 436 gtgataaagtttccccaactgatattgaggaagggatgagagtcggtgttgatcggaaca 495 ||||| ||||| | || ||||| ||||| || || ||||||||||||||||| |||||| Sbjct: 391 gtgatcaagttgctcctactgacattgaagagggtatgagagtcggtgttgacaggaaca 450 Query: 496 agtaccagattcagattccgttgccaccgaagattgaccccagcgtcactatgatgacgg 555 | ||||||||||| || || | || || |||||||| |||| || || |||||| || Sbjct: 451 aataccagattcatatccctcttcctccaaagattgatcccactgtaacaatgatgcagg 510 Query: 556 ttgaggagaaaccagatgtcacgtataatgatgttgg 592 | ||||||||||| ||||| || || | ||||||||| Sbjct: 511 tagaggagaaacctgatgtaacatacagtgatgttgg 547
>gb|BC080137.1| Xenopus tropicalis 26S protease regulatory subunit 7, mRNA (cDNA clone MGC:89661 IMAGE:7026093), complete cds Length = 1482 Score = 65.9 bits (33), Expect = 1e-07 Identities = 126/157 (80%) Strand = Plus / Plus Query: 436 gtgataaagtttccccaactgatattgaggaagggatgagagtcggtgttgatcggaaca 495 ||||| ||||| | || ||||| ||||| || || ||||||||||||||||| |||||| Sbjct: 461 gtgatcaagttgctcctactgacattgaagagggtatgagagtcggtgttgacaggaaca 520 Query: 496 agtaccagattcagattccgttgccaccgaagattgaccccagcgtcactatgatgacgg 555 | ||||||||||| || || | || || |||||||| |||| || || |||||| || Sbjct: 521 aataccagattcatatccctcttcctccaaagattgatcccactgtaacaatgatgcagg 580 Query: 556 ttgaggagaaaccagatgtcacgtataatgatgttgg 592 | ||||||||||| ||||| || || | ||||||||| Sbjct: 581 tagaggagaaacctgatgtaacatacagtgatgttgg 617
>emb|CR760112.2| Xenopus tropicalis finished cDNA, clone TNeu106h10 Length = 1420 Score = 65.9 bits (33), Expect = 1e-07 Identities = 126/157 (80%) Strand = Plus / Plus Query: 436 gtgataaagtttccccaactgatattgaggaagggatgagagtcggtgttgatcggaaca 495 ||||| ||||| | || ||||| ||||| || || ||||||||||||||||| |||||| Sbjct: 396 gtgatcaagttgctcctactgacattgaagagggtatgagagtcggtgttgacaggaaca 455 Query: 496 agtaccagattcagattccgttgccaccgaagattgaccccagcgtcactatgatgacgg 555 | ||||||||||| || || | || || |||||||| |||| || || |||||| || Sbjct: 456 aataccagattcatatccctcttcctccaaagattgatcccactgtaacaatgatgcagg 515 Query: 556 ttgaggagaaaccagatgtcacgtataatgatgttgg 592 | ||||||||||| ||||| || || | ||||||||| Sbjct: 516 tagaggagaaacctgatgtaacatacagtgatgttgg 552
>ref|XM_519288.1| PREDICTED: Pan troglodytes similar to proteasome 26S ATPase subunit 2; proteasome 26S subunit, ATPase, 2; mammalian suppressor of sgv-1 of yeast; protease 26S subunit 7 (LOC463632), mRNA Length = 1374 Score = 63.9 bits (32), Expect = 6e-07 Identities = 113/140 (80%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagatt 512 ||||| ||||| |||||||||||||| || || ||| | || || || || ||||| ||| Sbjct: 466 actgacattgaagaagggatgagagtgggcgtggatagaaataaatatcaaattcacatt 525 Query: 513 ccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaaccagat 572 || ||||| || ||||||||||| | || ||||||||| ||| || |||||||| ||| Sbjct: 526 ccattgcctcctaagattgacccaacagttactatgatgcaggtggaagagaaacctgat 585 Query: 573 gtcacgtataatgatgttgg 592 ||||| || | ||||||||| Sbjct: 586 gtcacatacagtgatgttgg 605
>ref|NM_001015639.1| Bos taurus proteasome (prosome, macropain) 26S subunit, ATPase 2 (PSMC2), mRNA Length = 1440 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 456 gatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagattccg 515 |||||||| |||||||||||||| ||||| || | || ||||| |||||||| ||||| Sbjct: 430 gatattgaagaagggatgagagttggtgtggacagaaataagtatcagattcacattcca 489 Query: 516 ttgccaccgaagattgaccc 535 ||||| || ||||||||||| Sbjct: 490 ttgcctcctaagattgaccc 509
>emb|CR859816.1| Pongo pygmaeus mRNA; cDNA DKFZp469O1334 (from clone DKFZp469O1334) Length = 1549 Score = 63.9 bits (32), Expect = 6e-07 Identities = 113/140 (80%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagatt 512 ||||| ||||| |||||||||||||| ||||| ||| | || || || || ||||| ||| Sbjct: 458 actgacattgaagaagggatgagagtgggtgtggatagaaataaatatcaaattcacatt 517 Query: 513 ccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaaccagat 572 || ||||| || ||||||||||| | || || |||||| ||| || |||||||| ||| Sbjct: 518 ccattgcctcctaagattgacccaacagttaccatgatgcaggtggaagagaaacctgat 577 Query: 573 gtcacgtataatgatgttgg 592 ||||| || | ||||||||| Sbjct: 578 gtcacatacagtgatgttgg 597
>gb|BC102391.1| Bos taurus proteasome (prosome, macropain) 26S subunit, ATPase 2, mRNA (cDNA clone IMAGE:7948626), partial cds Length = 1492 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 456 gatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagattccg 515 |||||||| |||||||||||||| ||||| || | || ||||| |||||||| ||||| Sbjct: 467 gatattgaagaagggatgagagttggtgtggacagaaataagtatcagattcacattcca 526 Query: 516 ttgccaccgaagattgaccc 535 ||||| || ||||||||||| Sbjct: 527 ttgcctcctaagattgaccc 546
>gb|AC024260.4|AC024260 Arabidopsis thaliana chromosome 1 BAC F22G10 genomic sequence, complete sequence Length = 111936 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 418 agtttgttgttggattgggtgataaagtttccccaactgatattgaggaagg 469 |||||||||||||| | || ||||||||||| || ||||||||||||||||| Sbjct: 4815 agtttgttgttggacttggcgataaagtttctcccactgatattgaggaagg 4866 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 483 gttgatcggaacaagtaccagattcagattccgttgccaccgaagattgaccccagcgtc 542 ||||||||||| || || |||||||||||||| | || || || || || || ||||| Sbjct: 5007 gttgatcggaataaatatcagattcagattcctctacctcccaaaatcgatcctagcgtg 5066 Query: 543 actatgatgacggttgaggagaaaccagatgtcacgtataatgatgttgg 592 || |||||||| || || |||||||| ||||| || || ||||||||||| Sbjct: 5067 accatgatgactgtcgaagagaaacctgatgtaacttacaatgatgttgg 5116 Score = 44.1 bits (22), Expect = 0.52 Identities = 70/86 (81%) Strand = Plus / Plus Query: 255 aaggagtctgatactgggctagctccacctagccagtgggatctagtgtcagacaaacag 314 ||||||||||||||||| ||||||| || || || |||||||| || || || || || Sbjct: 4468 aaggagtctgatactggtttagctcctcccagtcaatgggatcttgtatctgataagcaa 4527 Query: 315 atgatgcaggaggagcagccactgca 340 |||||||| || ||||| || ||||| Sbjct: 4528 atgatgcaagaagagcaacctctgca 4553
>gb|AC009324.2| Arabidopsis thaliana chromosome I BAC T18A20 genomic sequence, complete sequence Length = 85413 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 418 agtttgttgttggattgggtgataaagtttccccaactgatattgaggaagg 469 |||||||||||||| | || ||||||||||| || ||||||||||||||||| Sbjct: 2607 agtttgttgttggacttggcgataaagtttctcccactgatattgaggaagg 2556 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Minus Query: 483 gttgatcggaacaagtaccagattcagattccgttgccaccgaagattgaccccagcgtc 542 ||||||||||| || || |||||||||||||| | || || || || || || ||||| Sbjct: 2415 gttgatcggaataaatatcagattcagattcctctacctcccaaaatcgatcctagcgtg 2356 Query: 543 actatgatgacggttgaggagaaaccagatgtcacgtataatgatgttgg 592 || |||||||| || || |||||||| ||||| || || ||||||||||| Sbjct: 2355 accatgatgactgtcgaagagaaacctgatgtaacttacaatgatgttgg 2306 Score = 46.1 bits (23), Expect = 0.13 Identities = 74/91 (81%) Strand = Plus / Minus Query: 483 gttgatcggaacaagtaccagattcagattccgttgccaccgaagattgaccccagcgtc 542 ||||||| ||| || || ||||| |||||||| | || || |||||||| || || || Sbjct: 10754 gttgatcagaagaaatatcagatacagattcctctacctccaaagattgatcctagtgtg 10695 Query: 543 actatgatgacggttgaggagaaaccagatg 573 || |||||||||||||| |||||||| |||| Sbjct: 10694 accatgatgacggttgaagagaaacctgatg 10664 Score = 44.1 bits (22), Expect = 0.52 Identities = 70/86 (81%) Strand = Plus / Minus Query: 255 aaggagtctgatactgggctagctccacctagccagtgggatctagtgtcagacaaacag 314 ||||||||||||||||| ||||||| || || || |||||||| || || || || || Sbjct: 2954 aaggagtctgatactggtttagctcctcccagtcaatgggatcttgtatctgataagcaa 2895 Query: 315 atgatgcaggaggagcagccactgca 340 |||||||| || ||||| || ||||| Sbjct: 2894 atgatgcaagaagagcaacctctgca 2869
>gb|BT020961.1| Bos taurus proteasome (prosome, macropain) 26S subunit, ATPase, 2 (PSMC2), mRNA, complete cds Length = 1440 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 456 gatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagattccg 515 |||||||| |||||||||||||| ||||| || | || ||||| |||||||| ||||| Sbjct: 430 gatattgaagaagggatgagagttggtgtggacagaaataagtatcagattcacattcca 489 Query: 516 ttgccaccgaagattgaccc 535 ||||| || ||||||||||| Sbjct: 490 ttgcctcctaagattgaccc 509
>ref|XM_533103.2| PREDICTED: Canis familiaris similar to proteasome (prosome, macropain) 26S subunit, ATPase 2 (LOC475896), mRNA Length = 2863 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 459 attgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagattccgttg 518 ||||| |||||||||||||| ||||| || | || ||||| |||||||| |||||| || Sbjct: 1819 attgaagaagggatgagagtgggtgtggacagaaataagtatcagattcatattccgctg 1878 Query: 519 ccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaaccagatgtcac 577 || || ||||||||||| | || || |||||| ||| ||||| ||||| |||||||| Sbjct: 1879 cctcctaagattgacccaacagttaccatgatgcaggtggaggaaaaacctgatgtcac 1937
>dbj|AP006734.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02K14, TM0918c, complete sequence Length = 26540 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 114 gagaagaacccgcgccccctcgacgaggacgacatcgccctcctcaagacctacg 168 |||||||| || |||||||| || ||||| ||||||||||||||||| ||||||| Sbjct: 469 gagaagaatcctcgccccctggatgaggatgacatcgccctcctcaaaacctacg 415
>ref|XM_734022.1| Plasmodium chabaudi chabaudi hypothetical protein (PC301998.00.0) partial mRNA Length = 420 Score = 60.0 bits (30), Expect = 9e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 399 aatgtaaaacaaattgcaaagtttgttgttggattgggtgataaagtttccccaactgat 458 |||||||||||||| ||||| |||||||| || || || |||||||| | || | |||| Sbjct: 301 aatgtaaaacaaatagcaaaatttgttgtcggtttaggcgataaagtggcacctagtgat 360 Query: 459 attgaggaagggatgagagtcggtgttgat 488 ||||| ||||| |||||||| || |||||| Sbjct: 361 attgaagaaggtatgagagttggagttgat 390
>ref|XM_666872.1| Plasmodium berghei strain ANKA hypothetical protein (PB301098.00.0) partial mRNA Length = 408 Score = 60.0 bits (30), Expect = 9e-06 Identities = 129/162 (79%) Strand = Plus / Plus Query: 327 gagcagccactgcaagtagcaaggtgcaccaagattataaaccctaataccgacgatgcc 386 ||||||||||| |||||||| || || || ||||| ||||| || ||||||| | | Sbjct: 229 gagcagccactacaagtagctagatgtacaaagataataaattctgataccgatcaaaca 288 Query: 387 aaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggtgataaagtt 446 ||||| || || |||||||||||||| |||||||||||||| || || || || || || Sbjct: 289 aaatatataataaatgtaaaacaaatagcaaagtttgttgtcggcttaggcgagaaggtg 348 Query: 447 tccccaactgatattgaggaagggatgagagtcggtgttgat 488 | || | ||||||||| ||||| |||||||| || |||||| Sbjct: 349 gcacctagtgatattgaagaaggcatgagagttggggttgat 390
>ref|XM_675243.1| Plasmodium berghei strain ANKA 26S proteasome regulatory subunit 7 (PB001133.00.0) partial mRNA Length = 1263 Score = 60.0 bits (30), Expect = 9e-06 Identities = 129/162 (79%) Strand = Plus / Plus Query: 327 gagcagccactgcaagtagcaaggtgcaccaagattataaaccctaataccgacgatgcc 386 ||||||||||| |||||||| || || || ||||| ||||| || ||||||| | | Sbjct: 229 gagcagccactacaagtagctagatgtacaaagataataaattctgataccgatcaaaca 288 Query: 387 aaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggtgataaagtt 446 ||||| || || |||||||||||||| |||||||||||||| || || || || || || Sbjct: 289 aaatatataataaatgtaaaacaaatagcaaagtttgttgtcggcttaggcgagaaggtg 348 Query: 447 tccccaactgatattgaggaagggatgagagtcggtgttgat 488 | || | ||||||||| ||||| |||||||| || |||||| Sbjct: 349 gcacctagtgatattgaagaaggcatgagagttggggttgat 390
>ref|NM_073604.3| Caenorhabditis elegans proteasome Regulatory Particle, ATPase-like family member (rpt-1) (rpt-1) mRNA, complete cds Length = 1603 Score = 60.0 bits (30), Expect = 9e-06 Identities = 99/122 (81%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagatt 512 |||||||||||||| || |||||||| || || || || |||||||| || ||||| || Sbjct: 438 actgatattgaggagggcatgagagtaggagtagaccgtaacaagtatcaaattcatctt 497 Query: 513 ccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaaccagat 572 |||||||| | || ||||| || | |||||| |||||| |||||| || ||||||||| Sbjct: 498 ccgttgcccgccaaaattgatccaaccgtcacaatgatgcaggttgaagaaaaaccagat 557 Query: 573 gt 574 || Sbjct: 558 gt 559
>ref|NM_033236.1| Rattus norvegicus proteasome (prosome, macropain) 26S subunit, ATPase 2 (Psmc2), mRNA Length = 1403 Score = 58.0 bits (29), Expect = 3e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagatt 512 ||||| ||||||||||||||||||||||| || || | || || ||||| ||||| ||| Sbjct: 412 actgacattgaggaagggatgagagtcggcgtggacagaaataaataccaaattcacatt 471 Query: 513 ccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaaccagat 572 || |||| || ||||||||||| | || || |||||| ||| ||||| ||||| ||| Sbjct: 472 ccactgcctcctaagattgacccaacagttaccatgatgcaggtggaggaaaaacctgat 531 Query: 573 gtcac 577 ||||| Sbjct: 532 gtcac 536
>gb|BC061542.1| Rattus norvegicus proteasome (prosome, macropain) 26S subunit, ATPase 2, mRNA (cDNA clone MGC:72754 IMAGE:6918933), complete cds Length = 1473 Score = 58.0 bits (29), Expect = 3e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagatt 512 ||||| ||||||||||||||||||||||| || || | || || ||||| ||||| ||| Sbjct: 454 actgacattgaggaagggatgagagtcggcgtggacagaaataaataccaaattcacatt 513 Query: 513 ccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaaccagat 572 || |||| || ||||||||||| | || || |||||| ||| ||||| ||||| ||| Sbjct: 514 ccactgcctcctaagattgacccaacagttaccatgatgcaggtggaggaaaaacctgat 573 Query: 573 gtcac 577 ||||| Sbjct: 574 gtcac 578
>ref|XM_655429.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2917.2), mRNA Length = 1332 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 489 cggaacaagtaccagattcagattccgttgccaccgaagattgaccccagcgtcactatg 548 |||||||||||||||||| | | |||||||| || ||||||||||| ||||| || ||| Sbjct: 460 cggaacaagtaccagattatgttgccgttgccgcccaagattgaccctagcgttacgatg 519 Query: 549 atgac 553 ||||| Sbjct: 520 atgac 524
>dbj|D50694.1|RATMSS1A Rattus norvegicus mRNA for proteasomal ATPase (MSS1), complete cds Length = 1403 Score = 58.0 bits (29), Expect = 3e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagatt 512 ||||| ||||||||||||||||||||||| || || | || || ||||| ||||| ||| Sbjct: 412 actgacattgaggaagggatgagagtcggcgtggacagaaataaataccaaattcacatt 471 Query: 513 ccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaaccagat 572 || |||| || ||||||||||| | || || |||||| ||| ||||| ||||| ||| Sbjct: 472 ccactgcctcctaagattgacccaacagttaccatgatgcaggtggaggaaaaacctgat 531 Query: 573 gtcac 577 ||||| Sbjct: 532 gtcac 536
>ref|NM_002803.2| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 2 (PSMC2), mRNA Length = 1545 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagatt 512 ||||| ||||| |||||||||||||| || || ||| | || || || || ||||| ||| Sbjct: 464 actgacattgaagaagggatgagagtgggcgtggatagaaataaatatcaaattcacatt 523 Query: 513 ccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaaccagat 572 || ||||| || ||||||||||| | || || |||||| ||| || |||||||| ||| Sbjct: 524 ccattgcctcctaagattgacccaacagttaccatgatgcaggtggaagagaaacctgat 583 Query: 573 gtcacgtataatgatgttgg 592 ||||| || | ||||||||| Sbjct: 584 gtcacatacagtgatgttgg 603
>ref|XM_710833.1| Candida albicans SC5314 putative 26S proteasome regulatory particle ATPase Rpt1p (CaO19_8071), mRNA Length = 1335 Score = 56.0 bits (28), Expect = 1e-04 Identities = 130/164 (79%) Strand = Plus / Plus Query: 411 attgcaaagtttgttgttggattgggtgataaagtttccccaactgatattgaggaaggg 470 ||||| ||||||||||| ||||| ||||| | | |||| || || ||||| || ||||| Sbjct: 385 attgccaagtttgttgtaggattaggtgaaagactttctcctaccgatatcgaagaagga 444 Query: 471 atgagagtcggtgttgatcggaacaagtaccagattcagattccgttgccaccgaagatt 530 |||||||| ||||||||| | ||||||| | ||||| | ||||||||||| | ||| Sbjct: 445 atgagagttggtgttgatagacacaagtatgaaattcaattaccgttgccacctagaatt 504 Query: 531 gaccccagcgtcactatgatgacggttgaggagaaaccagatgt 574 || || || || |||||||| || ||||||||||||||||| Sbjct: 505 gatccatcagtgaccatgatgacagtggaggagaaaccagatgt 548 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 249 gggataaaggagtctgatactgggctagctccacct 284 |||||||| ||| |||||||||| ||||||||||| Sbjct: 190 gggataaaagagagtgatactgggttagctccacct 225
>ref|XM_710783.1| Candida albicans SC5314 putative 26S proteasome regulatory particle ATPase Rpt1p (CaO19_441), mRNA Length = 1335 Score = 56.0 bits (28), Expect = 1e-04 Identities = 130/164 (79%) Strand = Plus / Plus Query: 411 attgcaaagtttgttgttggattgggtgataaagtttccccaactgatattgaggaaggg 470 ||||| ||||||||||| ||||| ||||| | | |||| || || ||||| || ||||| Sbjct: 385 attgccaagtttgttgtaggattaggtgaaagactttctcctaccgatatcgaagaagga 444 Query: 471 atgagagtcggtgttgatcggaacaagtaccagattcagattccgttgccaccgaagatt 530 |||||||| ||||||||| | ||||||| | ||||| | ||||||||||| | ||| Sbjct: 445 atgagagttggtgttgatagacacaagtatgaaattcaattaccgttgccacctagaatt 504 Query: 531 gaccccagcgtcactatgatgacggttgaggagaaaccagatgt 574 || || || || |||||||| || ||||||||||||||||| Sbjct: 505 gatccatcagtgaccatgatgacagtggaggagaaaccagatgt 548 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 249 gggataaaggagtctgatactgggctagctccacct 284 |||||||| ||| |||||||||| ||||||||||| Sbjct: 190 gggataaaagagagtgatactgggttagctccacct 225
>gb|BC002589.2| Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 2, mRNA (cDNA clone MGC:3004 IMAGE:3161790), complete cds Length = 1507 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagatt 512 ||||| ||||| |||||||||||||| || || ||| | || || || || ||||| ||| Sbjct: 426 actgacattgaagaagggatgagagtgggcgtggatagaaataaatatcaaattcacatt 485 Query: 513 ccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaaccagat 572 || ||||| || ||||||||||| | || || |||||| ||| || |||||||| ||| Sbjct: 486 ccattgcctcctaagattgacccaacagttaccatgatgcaggtggaagagaaacctgat 545 Query: 573 gtcacgtataatgatgttgg 592 ||||| || | ||||||||| Sbjct: 546 gtcacatacagtgatgttgg 565
>emb|CR624764.1| full-length cDNA clone CS0DJ012YE07 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1402 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagatt 512 ||||| ||||| |||||||||||||| || || ||| | || || || || ||||| ||| Sbjct: 429 actgacattgaagaagggatgagagtgggcgtggatagaaataaatatcaaattcacatt 488 Query: 513 ccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaaccagat 572 || ||||| || ||||||||||| | || || |||||| ||| || |||||||| ||| Sbjct: 489 ccattgcctcctaagattgacccaacagttaccatgatgcaggtggaagagaaacctgat 548 Query: 573 gtcacgtataatgatgttgg 592 ||||| || | ||||||||| Sbjct: 549 gtcacatacagtgatgttgg 568
>emb|CR620729.1| full-length cDNA clone CS0DF038YI21 of Fetal brain of Homo sapiens (human) Length = 1406 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagatt 512 ||||| ||||| |||||||||||||| || || ||| | || || || || ||||| ||| Sbjct: 421 actgacattgaagaagggatgagagtgggcgtggatagaaataaatatcaaattcacatt 480 Query: 513 ccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaaccagat 572 || ||||| || ||||||||||| | || || |||||| ||| || |||||||| ||| Sbjct: 481 ccattgcctcctaagattgacccaacagttaccatgatgcaggtggaagagaaacctgat 540 Query: 573 gtcacgtataatgatgttgg 592 ||||| || | ||||||||| Sbjct: 541 gtcacatacagtgatgttgg 560
>emb|CR618659.1| full-length cDNA clone CS0DF020YB13 of Fetal brain of Homo sapiens (human) Length = 1457 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagatt 512 ||||| ||||| |||||||||||||| || || ||| | || || || || ||||| ||| Sbjct: 479 actgacattgaagaagggatgagagtgggcgtggatagaaataaatatcaaattcacatt 538 Query: 513 ccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaaccagat 572 || ||||| || ||||||||||| | || || |||||| ||| || |||||||| ||| Sbjct: 539 ccattgcctcctaagattgacccaacagttaccatgatgcaggtggaagagaaacctgat 598 Query: 573 gtcacgtataatgatgttgg 592 ||||| || | ||||||||| Sbjct: 599 gtcacatacagtgatgttgg 618
>emb|CR605145.1| full-length cDNA clone CS0DA005YB23 of Neuroblastoma of Homo sapiens (human) Length = 1414 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagatt 512 ||||| ||||| |||||||||||||| || || ||| | || || || || ||||| ||| Sbjct: 421 actgacattgaagaagggatgagagtgggcgtggatagaaataaatatcaaattcacatt 480 Query: 513 ccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaaccagat 572 || ||||| || ||||||||||| | || || |||||| ||| || |||||||| ||| Sbjct: 481 ccattgcctcctaagattgacccaacagttaccatgatgcaggtggaagagaaacctgat 540 Query: 573 gtcacgtataatgatgttgg 592 ||||| || | ||||||||| Sbjct: 541 gtcacatacagtgatgttgg 560
>emb|CR602126.1| full-length cDNA clone CS0DI006YP09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1436 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagatt 512 ||||| ||||| |||||||||||||| || || ||| | || || || || ||||| ||| Sbjct: 444 actgacattgaagaagggatgagagtgggcgtggatagaaataaatatcaaattcacatt 503 Query: 513 ccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaaccagat 572 || ||||| || ||||||||||| | || || |||||| ||| || |||||||| ||| Sbjct: 504 ccattgcctcctaagattgacccaacagttaccatgatgcaggtggaagagaaacctgat 563 Query: 573 gtcacgtataatgatgttgg 592 ||||| || | ||||||||| Sbjct: 564 gtcacatacagtgatgttgg 583
>dbj|AB075520.1| Homo sapiens neuroblastoma cDNA, clone:Nbla10058, full insert sequence Length = 2049 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagatt 512 ||||| ||||| |||||||||||||| || || ||| | || || || || ||||| ||| Sbjct: 443 actgacattgaagaagggatgagagtgggcgtggatagaaataaatatcaaattcacatt 502 Query: 513 ccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaaccagat 572 || ||||| || ||||||||||| | || || |||||| ||| || |||||||| ||| Sbjct: 503 ccattgcctcctaagattgacccaacagttaccatgatgcaggtggaagagaaacctgat 562 Query: 573 gtcacgtataatgatgttgg 592 ||||| || | ||||||||| Sbjct: 563 gtcacatacagtgatgttgg 582
>dbj|AB169834.1| Macaca fascicularis brain cDNA, clone: QnpA-16482, similar to human proteasome (prosome, macropain) 26S subunit, ATPase, 2(PSMC2), mRNA, RefSeq: NM_002803.2 Length = 1488 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagatt 512 ||||| ||||| |||||||||||||| ||||| || | || || || || ||||| ||| Sbjct: 464 actgacattgaagaagggatgagagtgggtgtggacagaaataaatatcaaattcacatt 523 Query: 513 ccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaaccagat 572 || ||||| || ||||||||||| | || || |||||| ||| || |||||||| ||| Sbjct: 524 ccattgcctcctaagattgacccaacagttaccatgatgcaggtggaagagaaacctgat 583 Query: 573 gtcacgtataatgatgttgg 592 ||||| || | ||||||||| Sbjct: 584 gtcacatacagtgatgttgg 603
>dbj|D11094.1|HUMMSS1 Homo sapiens MSS1 mRNA for mammalian suppressor of sgv1, complete cds Length = 1478 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagatt 512 ||||| ||||| |||||||||||||| || || ||| | || || || || ||||| ||| Sbjct: 460 actgacattgaagaagggatgagagtgggcgtggatagaaataaatatcaaattcacatt 519 Query: 513 ccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaaccagat 572 || ||||| || ||||||||||| | || || |||||| ||| || |||||||| ||| Sbjct: 520 ccattgcctcctaagattgacccaacagttaccatgatgcaggtggaagagaaacctgat 579 Query: 573 gtcacgtataatgatgttgg 592 ||||| || | ||||||||| Sbjct: 580 gtcacatacagtgatgttgg 599
>emb|CR681987.1|CNS0FP67 Tetraodon nigroviridis full-length cDNA Length = 1266 Score = 54.0 bits (27), Expect = 5e-04 Identities = 111/139 (79%) Strand = Plus / Plus Query: 454 ctgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagattc 513 |||| ||||| || || |||||||| |||||||| | |||| || |||||||| |||| Sbjct: 416 ctgacattgaagagggaatgagagttggtgttgacagacacaaatatcagattcacattc 475 Query: 514 cgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaaccagatg 573 | |||| || ||||| ||||| | |||||||||||| ||| ||||| || ||||||| Sbjct: 476 ctctgcctcccaagatcgacccaacggtcactatgatgcaggtagaggaaaagccagatg 535 Query: 574 tcacgtataatgatgttgg 592 | || |||| ||||||||| Sbjct: 536 tgacctatagtgatgttgg 554 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 327 gagcagccactgcaagtagcaaggtgcaccaagat 361 |||||||| |||||||||||||| ||||| ||||| Sbjct: 291 gagcagcccctgcaagtagcaagatgcacaaagat 325
>emb|CR655828.2|CNS0F50A Tetraodon nigroviridis full-length cDNA Length = 977 Score = 54.0 bits (27), Expect = 5e-04 Identities = 115/143 (80%), Gaps = 1/143 (0%) Strand = Plus / Plus Query: 450 ccaactgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcag 509 |||||||| ||||| || || |||||||| |||||||| | ||||| || |||||| | Sbjct: 14 ccaactgacattgaagagggaatgagagttggtgttgacagaaacaaatatcagatt-ac 72 Query: 510 attccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaacca 569 ||||| |||| || ||||| ||||| | |||||||||||| ||| ||||| || ||| Sbjct: 73 attcctctgcctcccaagatcgacccaacggtcactatgatgcaggtagaggaaaagcca 132 Query: 570 gatgtcacgtataatgatgttgg 592 ||||| || |||| ||||||||| Sbjct: 133 gatgtgacctatagtgatgttgg 155
>gb|AC148763.14| Medicago truncatula clone mth2-29o24, complete sequence Length = 104879 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 546 atgatgacggttgaggagaaaccagatgtcacgtataatgatgttgg 592 |||||||| ||||| |||||||||||| | || |||||||||||||| Sbjct: 93639 atgatgacagttgaagagaaaccagatttgacatataatgatgttgg 93685
>emb|AL113283.1|CNS01AQZ Botrytis cinerea strain T4 cDNA library Length = 696 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 456 gatattgaggaagggatgagagtcggtgttgatcggaacaagtacca 502 |||||||||||||| |||||||| ||||| || || ||||||||||| Sbjct: 589 gatattgaggaaggaatgagagttggtgtcgaccgcaacaagtacca 635
>emb|AL113226.1|CNS01APE Botrytis cinerea strain T4 cDNA library Length = 720 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 456 gatattgaggaagggatgagagtcggtgttgatcggaacaagtacca 502 |||||||||||||| |||||||| ||||| || || ||||||||||| Sbjct: 187 gatattgaggaaggaatgagagttggtgtcgaccgcaacaagtacca 233
>ref|XM_623740.1| PREDICTED: Apis mellifera similar to ENSANGP00000021987 (LOC551343), mRNA Length = 1534 Score = 54.0 bits (27), Expect = 5e-04 Identities = 114/143 (79%) Strand = Plus / Plus Query: 450 ccaactgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcag 509 |||||||||||||| ||||| ||| |||| || || ||||| || || || |||||||| Sbjct: 509 ccaactgatattgaagaaggtatgcgagtaggagtagatcgtaataaatatcagattcat 568 Query: 510 attccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaacca 569 ||||| | ||||| || ||||| || | || || |||||| ||||| |||||||| Sbjct: 569 attccacttccaccaaaaattgatccaactgtaacaatgatgcaagttgaagagaaacct 628 Query: 570 gatgtcacgtataatgatgttgg 592 |||||||| |||| ||||||||| Sbjct: 629 gatgtcacatatagtgatgttgg 651
>gb|AY324383.1| Perkinsus marinus divalent cation transporter gene, complete cds Length = 10156 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgttgatcgg 491 ||||||||||||||||| ||||||||||| || |||||| Sbjct: 9413 actgatattgaggaaggtatgagagtcggagtggatcgg 9451 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 546 atgatgacggttgaggagaaaccagatgtcacgta 580 |||||||| ||||||||||| ||||| |||||||| Sbjct: 9559 atgatgaccgttgaggagaagccagacgtcacgta 9593
>gb|AY609476.1| Sus scrofa clone Clu_12870.scr.msk.p1.Contig3, mRNA sequence Length = 1571 Score = 54.0 bits (27), Expect = 5e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 459 attgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagattccgttg 518 ||||| |||||||||||||| ||||| || | || ||||| |||||||| ||||| || Sbjct: 471 attgaagaagggatgagagttggtgtggacagaaataagtatcagattcacattccactg 530 Query: 519 ccaccgaagattgacccca 537 || || ||||||||||||| Sbjct: 531 cctcctaagattgacccca 549
>ref|XM_725641.1| Plasmodium yoelii yoelii str. 17XNL 26S proteasome subunit P45 (PY02805) partial mRNA Length = 1428 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 399 aatgtaaaacaaattgcaaagtttgttgttggattgggtgataaagtttccccaactgat 458 |||||||||||||| ||||| |||||||| || || ||||| || || | || | |||| Sbjct: 391 aatgtaaaacaaatagcaaaatttgttgtcggtttaggtgagaaggtggcacctagtgat 450 Query: 459 attgaggaagggatgagagtcggtgttgat 488 ||||| ||||| |||||||| || |||||| Sbjct: 451 attgaagaaggtatgagagttggagttgat 480
>emb|AL114604.1|CNS01BRO Botrytis cinerea strain T4 cDNA library Length = 720 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 456 gatattgaggaagggatgagagtcggtgttgatcggaacaagtacc 501 |||||||||||||| |||||||| ||||| || || |||||||||| Sbjct: 577 gatattgaggaaggaatgagagttggtgtcgaccgcaacaagtacc 622
>ref|NM_104255.3| Arabidopsis thaliana ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT1G53780 mRNA, complete cds Length = 1585 Score = 50.1 bits (25), Expect = 0.008 Identities = 124/157 (78%) Strand = Plus / Plus Query: 417 aagtttgttgttggattgggtgataaagtttccccaactgatattgaggaagggatgaga 476 |||| |||||||||| | || ||||||| ||| || ||||| || || | ||| ||| | Sbjct: 448 aagtatgttgttggacttggcgataaagcttctcccactgacatagaagcaggaatgcgt 507 Query: 477 gtcggtgttgatcggaacaagtaccagattcagattccgttgccaccgaagattgacccc 536 || || ||||||| ||| || || ||||| |||||||| | || || |||||||| || Sbjct: 508 gtgggagttgatcagaagaaatatcagatacagattcctctacctccaaagattgatcct 567 Query: 537 agcgtcactatgatgacggttgaggagaaaccagatg 573 || || || |||||||||||||| |||||||| |||| Sbjct: 568 agtgtgaccatgatgacggttgaagagaaacctgatg 604
>gb|DQ216287.1| Taeniopygia guttata clone 0064P0002D03 26S protease regulatory subunit 7-like mRNA, complete sequence Length = 1456 Score = 50.1 bits (25), Expect = 0.008 Identities = 82/101 (81%) Strand = Plus / Plus Query: 492 aacaagtaccagattcagattccgttgccaccgaagattgaccccagcgtcactatgatg 551 ||||||||||| || || ||||| ||||| || |||||||| |||| ||||| |||||| Sbjct: 460 aacaagtaccaaatccatattcccttgcctccaaagattgatcccacagtcaccatgatg 519 Query: 552 acggttgaggagaaaccagatgtcacgtataatgatgttgg 592 || ||||| ||||| |||||||| || | ||||||||| Sbjct: 520 caagtagaggaaaaacctgatgtcacttacagtgatgttgg 560 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 327 gagcagccactgcaagtagcaaggtgcaccaagattat 364 ||||| ||| ||||||| ||||||||||| |||||||| Sbjct: 295 gagcaaccattgcaagttgcaaggtgcacaaagattat 332
>ref|XM_761139.1| Theileria parva strain Muguga chromosome 1 26S proteasome regulatory subunit 7 (TP01_0711) partial mRNA Length = 1278 Score = 50.1 bits (25), Expect = 0.008 Identities = 145/185 (78%) Strand = Plus / Plus Query: 384 gccaaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggtgataaa 443 ||||||||||| ||||| || |||||||| || || || ||||| ||||||||||| || Sbjct: 301 gccaaatacatcatcaacgttaaacaaatcgccaaattcgttgtgggattgggtgagaag 360 Query: 444 gtttccccaactgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccag 503 | | | | || ||||| ||||| || || ||||| || ||||| || |||||||| || Sbjct: 361 gctgcggctacggatatagaggagggtatcagagttggagttgaccgtaacaagtataag 420 Query: 504 attcagattccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggag 563 || ||||| | || || || || ||||||||| || || |||||||| ||||||||| Sbjct: 421 atacagataactttaccgcctaaaattgacccctcagtaaccatgatgacagttgaggag 480 Query: 564 aaacc 568 ||||| Sbjct: 481 aaacc 485
>gb|U13895.1|RNU13895 Rattus norvegicus MSS1 protein (MSS1) mRNA, partial cds Length = 429 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcgg 481 ||||| ||||||||||||||||||||||| Sbjct: 357 actgacattgaggaagggatgagagtcgg 385
>ref|NM_011188.1| Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase 2 (Psmc2), mRNA Length = 1784 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgt 484 ||||| ||||| |||||||||||||||||||| Sbjct: 796 actgacattgaagaagggatgagagtcggtgt 827
>ref|XM_805956.1| Trypanosoma cruzi strain CL Brener proteasome regulatory ATPase subunit 1 (Tc00.1047053506857.90) partial mRNA Length = 1314 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 544 ctatgatgacggttgaggagaaaccagatgtcacgtataatgatgttggcgg 595 |||||||| ||| |||||||||||||||||||| || || ||||| ||||| Sbjct: 503 ctatgatgcaggtggaggagaaaccagatgtcacatacaacgatgtaggcgg 554
>ref|XM_808626.1| Trypanosoma cruzi strain CL Brener proteasome regulatory ATPase subunit 1 (Tc00.1047053509207.160) partial mRNA Length = 1314 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 544 ctatgatgacggttgaggagaaaccagatgtcacgtataatgatgttggcgg 595 |||||||| ||| |||||||||||||||||||| || || ||||| ||||| Sbjct: 503 ctatgatgcaggtggaggagaaaccagatgtcacatacaacgatgtaggcgg 554
>gb|BC005462.1| Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase 2, mRNA (cDNA clone MGC:6418 IMAGE:3590739), complete cds Length = 1448 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgt 484 ||||| ||||| |||||||||||||||||||| Sbjct: 444 actgacattgaagaagggatgagagtcggtgt 475
>ref|XM_967296.1| PREDICTED: Tribolium castaneum similar to CG1341-PA (LOC661114), mRNA Length = 1311 Score = 48.1 bits (24), Expect = 0.033 Identities = 78/96 (81%) Strand = Plus / Plus Query: 456 gatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagattccg 515 ||||| ||||| || |||||||| |||||||| || || |||||||| || || || || Sbjct: 406 gatatcgaggagggtatgagagtgggtgttgaccgcaataagtaccaaatccacatcccc 465 Query: 516 ttgccaccgaagattgaccccagcgtcactatgatg 551 ||||| || || || ||||||| |||||||||||| Sbjct: 466 ttgccccccaaaatcgaccccactgtcactatgatg 501
>dbj|AK146919.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920075E16 product:proteasome (prosome, macropain) 26S subunit, ATPase 2, full insert sequence Length = 1424 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgt 484 ||||| ||||| |||||||||||||||||||| Sbjct: 435 actgacattgaagaagggatgagagtcggtgt 466
>dbj|AK153413.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830157F19 product:proteasome (prosome, macropain) 26S subunit, ATPase 2, full insert sequence Length = 1427 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgt 484 ||||| ||||| |||||||||||||||||||| Sbjct: 438 actgacattgaagaagggatgagagtcggtgt 469
>dbj|AK168548.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920034A08 product:proteasome (prosome, macropain) 26S subunit, ATPase 2, full insert sequence Length = 1426 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgt 484 ||||| ||||| |||||||||||||||||||| Sbjct: 435 actgacattgaagaagggatgagagtcggtgt 466
>dbj|AK076874.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930525G09 product:PROTEASOME (PROSOME, MACROPAIN) 26S SUBUNIT, ATPASE 2, full insert sequence Length = 1784 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgt 484 ||||| ||||| |||||||||||||||||||| Sbjct: 796 actgacattgaagaagggatgagagtcggtgt 827
>dbj|AK005083.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500000I15 product:proteasome (prosome, macropain) 26S subunit, ATPase 2, full insert sequence Length = 1406 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgt 484 ||||| ||||| |||||||||||||||||||| Sbjct: 417 actgacattgaagaagggatgagagtcggtgt 448
>dbj|AK216249.1| Mus musculus cDNA, clone:Y2G0137L14, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000030769, based on BLAT search Length = 287 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgt 484 ||||| ||||| |||||||||||||||||||| Sbjct: 167 actgacattgaagaagggatgagagtcggtgt 198
>ref|XM_523172.1| PREDICTED: Pan troglodytes LOC467777 (LOC467777), mRNA Length = 2781 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 217 aggagttggccaagaggatcaat 239 ||||||||||||||||||||||| Sbjct: 1844 aggagttggccaagaggatcaat 1866
>ref|XM_459634.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E07931g) partial mRNA Length = 1341 Score = 46.1 bits (23), Expect = 0.13 Identities = 80/99 (80%) Strand = Plus / Plus Query: 411 attgcaaagtttgttgttggattgggtgataaagtttccccaactgatattgaggaaggg 470 ||||| || ||||| |||||||||||||| | ||||| || || ||||| || ||||| Sbjct: 391 attgccaaatttgtggttggattgggtgaaagggtttctcctacggatatagaagaaggt 450 Query: 471 atgagagtcggtgttgatcggaacaagtaccagattcag 509 |||||||| ||||| ||| | | |||||| |||||||| Sbjct: 451 atgagagttggtgtggatagacagaagtacgagattcag 489
>ref|XM_751676.1| Ustilago maydis 521 hypothetical protein (UM00622.1) partial mRNA Length = 1437 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 456 gatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagattcc 514 |||||||| || || ||| | |||||||| ||||| ||||||||||| || |||||||| Sbjct: 532 gatattgaagagggcatgcgcgtcggtgtcgatcgcaacaagtaccaaatccagattcc 590
>ref|XM_502698.1| Yarrowia lipolytica CLIB122, YALI0D11418g predicted mRNA Length = 1311 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 539 cgtcactatgatgacggttgaggagaaaccagatgtcac 577 |||||| ||||||||||| |||||||| || |||||||| Sbjct: 489 cgtcaccatgatgacggtcgaggagaagcccgatgtcac 527
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 46.1 bits (23), Expect = 0.13 Identities = 80/99 (80%) Strand = Plus / Minus Query: 411 attgcaaagtttgttgttggattgggtgataaagtttccccaactgatattgaggaaggg 470 ||||| || ||||| |||||||||||||| | ||||| || || ||||| || ||||| Sbjct: 581906 attgccaaatttgtggttggattgggtgaaagggtttctcctacggatatagaagaaggt 581847 Query: 471 atgagagtcggtgttgatcggaacaagtaccagattcag 509 |||||||| ||||| ||| | | |||||| |||||||| Sbjct: 581846 atgagagttggtgtggatagacagaagtacgagattcag 581808
>gb|AY842844.1| Leishmania tarentolae chromosome 9 J-binding protein 1 (JBP1) gene, complete cds Length = 34527 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 203 cgagaaggagatcaaggagttggccaa 229 ||||||||||||| ||||||||||||| Sbjct: 5333 cgagaaggagatcgaggagttggccaa 5307
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 539 cgtcactatgatgacggttgaggagaaaccagatgtcac 577 |||||| ||||||||||| |||||||| || |||||||| Sbjct: 1429201 cgtcaccatgatgacggtcgaggagaagcccgatgtcac 1429163
>ref|XM_640986.1| Dictyostelium discoideum hypothetical protein (DDB0191270), partial mRNA Length = 4173 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 435 ggtgataaagtttccccaactg 456 |||||||||||||||||||||| Sbjct: 3923 ggtgataaagtttccccaactg 3902
>gb|BC053187.1| Danio rerio proteasome (prosome, macropain) 26S subunit, ATPase 2, mRNA (cDNA clone MGC:63995 IMAGE:6792582), complete cds Length = 1472 Score = 44.1 bits (22), Expect = 0.52 Identities = 97/122 (79%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagatt 512 ||||| ||||| ||||| ||||| || |||||||| |||| ||||| ||||| || ||| Sbjct: 449 actgacattgaagaaggaatgagggttggtgttgacaggaataagtatcagatccatatt 508 Query: 513 ccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaaccagat 572 || ||||||| || || || || | |||||||||||| ||| |||||||| || ||| Sbjct: 509 cctctgccacccaaaatcgatcctacggtcactatgatgcaggtagaggagaagcctgat 568 Query: 573 gt 574 || Sbjct: 569 gt 570
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 136 acgaggacgacatcgccctcctcaag 161 ||||||||||||||||||| |||||| Sbjct: 412581 acgaggacgacatcgccctgctcaag 412606 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 131 cctcgacgaggacgacatcgccct 154 |||||||||| ||||||||||||| Sbjct: 41918 cctcgacgagcacgacatcgccct 41895
>ref|XM_736119.1| Plasmodium chabaudi chabaudi 26S proteasome regulatory subunit 7 (PC300797.00.0) partial mRNA Length = 888 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 543 actatgatgacggttgaggagaaaccagatgtcacgtataatgatgttgg 592 ||||||||||| ||||| || ||||||||| | || ||||||||| |||| Sbjct: 70 actatgatgactgttgaagaaaaaccagatataacatataatgatattgg 119
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 125 gcgccccctcgacgaggacgac 146 |||||||||||||||||||||| Sbjct: 126835 gcgccccctcgacgaggacgac 126814
>emb|BX470086.9| Zebrafish DNA sequence from clone CH211-117C19 in linkage group 5, complete sequence Length = 190665 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 401 tgtaaaacaaattgcaaagttt 422 |||||||||||||||||||||| Sbjct: 44227 tgtaaaacaaattgcaaagttt 44248
>ref|NM_200966.1| Danio rerio proteasome (prosome, macropain) 26S subunit, ATPase 2 (psmc2), mRNA Length = 1472 Score = 44.1 bits (22), Expect = 0.52 Identities = 97/122 (79%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagatt 512 ||||| ||||| ||||| ||||| || |||||||| |||| ||||| ||||| || ||| Sbjct: 449 actgacattgaagaaggaatgagggttggtgttgacaggaataagtatcagatccatatt 508 Query: 513 ccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaaccagat 572 || ||||||| || || || || | |||||||||||| ||| |||||||| || ||| Sbjct: 509 cctctgccacccaaaatcgatcctacggtcactatgatgcaggtagaggagaagcctgat 568 Query: 573 gt 574 || Sbjct: 569 gt 570
>dbj|AB009080.1| Dictyostelium discoideum gene for TRFA, complete cds Length = 4875 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 435 ggtgataaagtttccccaactg 456 |||||||||||||||||||||| Sbjct: 4609 ggtgataaagtttccccaactg 4588
>gb|AC084532.1|CBRG22L08 Caenorhabditis briggsae cosmid G22L08, complete sequence Length = 34558 Score = 44.1 bits (22), Expect = 0.52 Identities = 40/46 (86%) Strand = Plus / Minus Query: 463 aggaagggatgagagtcggtgttgatcggaacaagtaccagattca 508 ||||||| ||||||||||| || ||||| |||||||| || ||||| Sbjct: 14630 aggaaggaatgagagtcggagtcgatcgcaacaagtatcaaattca 14585
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 125 gcgccccctcgacgaggacgac 146 |||||||||||||||||||||| Sbjct: 8109693 gcgccccctcgacgaggacgac 8109714 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 cagatgatgcaggaggagcagc 333 |||||||||||||||||||||| Sbjct: 8065602 cagatgatgcaggaggagcagc 8065581
>ref|XM_363655.1| Magnaporthe grisea 70-15 hypothetical protein (MG01581.4) partial mRNA Length = 1320 Score = 42.1 bits (21), Expect = 2.1 Identities = 90/113 (79%) Strand = Plus / Plus Query: 456 gatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagattccg 515 |||||||||||||||||| | || || || || ||||||| |||||||| | | || Sbjct: 415 gatattgaggaagggatgcgtgttggcgtggacaggaacaaataccagatcctcctgcct 474 Query: 516 ttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaacc 568 ||||| || ||||| || ||||||| || |||||||| || ||||||||||| Sbjct: 475 ttgccccccaagatcgatgccagcgttaccatgatgaccgtcgaggagaaacc 527
>ref|XM_710834.1| Candida albicans SC5314 hypothetical protein (CaO19_8072), mRNA Length = 615 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 546 atgatgacggttgaggagaaaccagatgt 574 |||||||| || ||||||||||||||||| Sbjct: 575 atgatgacagtggaggagaaaccagatgt 547
>ref|XM_710784.1| Candida albicans SC5314 hypothetical protein (CaO19_442), mRNA Length = 615 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 546 atgatgacggttgaggagaaaccagatgt 574 |||||||| || ||||||||||||||||| Sbjct: 575 atgatgacagtggaggagaaaccagatgt 547
>gb|BC067047.1| Mus musculus cDNA sequence BC067047, mRNA (cDNA clone IMAGE:30534841), partial cds Length = 5835 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 tcaaggagttggccaagagga 234 ||||||||||||||||||||| Sbjct: 619 tcaaggagttggccaagagga 639
>gb|AC113028.15| Mus musculus chromosome 5, clone RP23-205D3, complete sequence Length = 275646 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcgg 481 ||||| ||||| ||||||||||||||||| Sbjct: 13374 actgacattgaagaagggatgagagtcgg 13402
>ref|XM_983285.1| PREDICTED: Mus musculus cDNA sequence BC067047 (BC067047), mRNA Length = 5025 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 tcaaggagttggccaagagga 234 ||||||||||||||||||||| Sbjct: 707 tcaaggagttggccaagagga 727
>ref|XM_923276.2| PREDICTED: Mus musculus cDNA sequence BC067047, transcript variant 10 (BC067047), mRNA Length = 7024 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 tcaaggagttggccaagagga 234 ||||||||||||||||||||| Sbjct: 619 tcaaggagttggccaagagga 639
>ref|XM_923283.2| PREDICTED: Mus musculus cDNA sequence BC067047, transcript variant 11 (BC067047), mRNA Length = 5503 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 tcaaggagttggccaagagga 234 ||||||||||||||||||||| Sbjct: 707 tcaaggagttggccaagagga 727
>ref|XM_923308.2| PREDICTED: Mus musculus cDNA sequence BC067047, transcript variant 16 (BC067047), mRNA Length = 7118 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 tcaaggagttggccaagagga 234 ||||||||||||||||||||| Sbjct: 707 tcaaggagttggccaagagga 727
>ref|XM_914522.2| PREDICTED: Mus musculus cDNA sequence BC067047, transcript variant 9 (BC067047), mRNA Length = 7121 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 tcaaggagttggccaagagga 234 ||||||||||||||||||||| Sbjct: 716 tcaaggagttggccaagagga 736
>ref|XM_902963.2| PREDICTED: Mus musculus cDNA sequence BC067047, transcript variant 2 (BC067047), mRNA Length = 7024 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 tcaaggagttggccaagagga 234 ||||||||||||||||||||| Sbjct: 619 tcaaggagttggccaagagga 639
>ref|XM_902964.2| PREDICTED: Mus musculus cDNA sequence BC067047, transcript variant 3 (BC067047), mRNA Length = 5503 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 tcaaggagttggccaagagga 234 ||||||||||||||||||||| Sbjct: 707 tcaaggagttggccaagagga 727
>ref|XM_902969.2| PREDICTED: Mus musculus cDNA sequence BC067047, transcript variant 8 (BC067047), mRNA Length = 7118 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 tcaaggagttggccaagagga 234 ||||||||||||||||||||| Sbjct: 707 tcaaggagttggccaagagga 727
>ref|XM_485102.4| PREDICTED: Mus musculus cDNA sequence BC067047, transcript variant 1 (BC067047), mRNA Length = 7121 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 tcaaggagttggccaagagga 234 ||||||||||||||||||||| Sbjct: 716 tcaaggagttggccaagagga 736
>gb|AC146174.2| Pan troglodytes BAC clone CH251-549F12 from Y, complete sequence Length = 191823 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 429 ggattgggtgataaagtttcc 449 ||||||||||||||||||||| Sbjct: 122971 ggattgggtgataaagtttcc 122991
>gb|AC125313.2| Mus musculus BAC clone RP24-353A16 from 5, complete sequence Length = 152433 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 453 actgatattgaggaagggatgagagtcgg 481 ||||| ||||| ||||||||||||||||| Sbjct: 56430 actgacattgaagaagggatgagagtcgg 56402
>dbj|BS000614.1| Pan troglodytes chromosome Y clone:PTBY-009K01, complete sequences Length = 63466 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 429 ggattgggtgataaagtttcc 449 ||||||||||||||||||||| Sbjct: 32000 ggattgggtgataaagtttcc 31980
>dbj|BS000556.1| Pan troglodytes chromosome Y clone:PTB-461C11, complete sequences Length = 148964 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 429 ggattgggtgataaagtttcc 449 ||||||||||||||||||||| Sbjct: 126636 ggattgggtgataaagtttcc 126616
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 429 ggattgggtgataaagtttcc 449 ||||||||||||||||||||| Sbjct: 23757806 ggattgggtgataaagtttcc 23757826
>ref|NM_058125.3| Drosophila melanogaster Rpt1 CG1341-RA (Rpt1), mRNA Length = 1513 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 492 aacaagtaccagattcagattccgttgccaccgaagattga 532 |||||||||||||| || |||||| |||| || |||||||| Sbjct: 544 aacaagtaccagatccacattccgctgcctcccaagattga 584
>gb|AY061606.1| Drosophila melanogaster SD07148 full length cDNA Length = 1518 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 492 aacaagtaccagattcagattccgttgccaccgaagattga 532 |||||||||||||| || |||||| |||| || |||||||| Sbjct: 528 aacaagtaccagatccacattccgctgcctcccaagattga 568
>gb|AC093046.1| Drosophila melanogaster, chromosome 2R, region 43D-43E, BAC clone BACR29D02, complete sequence Length = 158372 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 492 aacaagtaccagattcagattccgttgccaccgaagattga 532 |||||||||||||| || |||||| |||| || |||||||| Sbjct: 74075 aacaagtaccagatccacattccgctgcctcccaagattga 74035
>gb|AC008259.4|AC008259 Drosophila melanogaster, chromosome 2R, region 43D-43D, BAC clone BACR04H12, complete sequence Length = 175285 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 492 aacaagtaccagattcagattccgttgccaccgaagattga 532 |||||||||||||| || |||||| |||| || |||||||| Sbjct: 146592 aacaagtaccagatccacattccgctgcctcccaagattga 146552
>gb|AC068130.3| Homo sapiens BAC clone RP11-640F22 from 2, complete sequence Length = 187543 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 400 atgtaaaacaaattgcaaagt 420 ||||||||||||||||||||| Sbjct: 92434 atgtaaaacaaattgcaaagt 92454
>dbj|AK173168.1| Mus musculus mRNA for mKIAA1415 protein Length = 6530 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 tcaaggagttggccaagagga 234 ||||||||||||||||||||| Sbjct: 716 tcaaggagttggccaagagga 736
>gb|AC079612.6| Homo sapiens BAC clone RP11-314A6 from 2, complete sequence Length = 118368 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 207 aaggagatcaaggagttggccaagaggat 235 |||||||| ||| |||||||||||||||| Sbjct: 88211 aaggagatgaagaagttggccaagaggat 88183
>gb|AF145307.1|AF145307 Drosophila melanogaster 26S proteasome regulatory complex subunit p48B mRNA, complete cds Length = 1302 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 492 aacaagtaccagattcagattccgttgccaccgaagattga 532 |||||||||||||| || |||||| |||| || |||||||| Sbjct: 433 aacaagtaccagatccacattccgctgcctcccaagattga 473
>dbj|AP002973.1| Albula glossodonta mitochondrial DNA, complete genome Length = 16255 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 ataaaggagtctgatactggg 272 ||||||||||||||||||||| Sbjct: 6020 ataaaggagtctgatactggg 6000
>gb|AE003840.3| Drosophila melanogaster chromosome 2R, section 10 of 73 of the complete sequence Length = 272100 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 492 aacaagtaccagattcagattccgttgccaccgaagattga 532 |||||||||||||| || |||||| |||| || |||||||| Sbjct: 136996 aacaagtaccagatccacattccgctgcctcccaagattga 136956
>gb|DQ347952.1| Hemibarbus longirostris mitochondrion, complete genome Length = 16609 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 ataaaggagtctgatactggg 272 ||||||||||||||||||||| Sbjct: 6041 ataaaggagtctgatactggg 6021
>gb|AC005447.1|AC005447 Drosophila melanogaster, chromosome 2R, region 43E5-43E10, P1 clone DS03503, complete sequence Length = 77907 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 492 aacaagtaccagattcagattccgttgccaccgaagattga 532 |||||||||||||| || |||||| |||| || |||||||| Sbjct: 51244 aacaagtaccagatccacattccgctgcctcccaagattga 51204
>gb|AC167663.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940143D9, complete sequence Length = 118759 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 gccgagaaggagatcaaggag 221 ||||||||||||||||||||| Sbjct: 17449 gccgagaaggagatcaaggag 17469
>dbj|AP004577.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT10N22, TM0381, complete sequence Length = 80655 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 acatgatcaatgtaaaacaaa 411 ||||||||||||||||||||| Sbjct: 55646 acatgatcaatgtaaaacaaa 55666
>gb|AC161878.3| Mus musculus BAC clone RP23-303B4 from chromosome 1, complete sequence Length = 169556 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 aattgcaaagtttgttgttgg 430 ||||||||||||||||||||| Sbjct: 18130 aattgcaaagtttgttgttgg 18150
>gb|AC167560.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940139D9, complete sequence Length = 118752 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 gccgagaaggagatcaaggag 221 ||||||||||||||||||||| Sbjct: 17448 gccgagaaggagatcaaggag 17468
>emb|AL683878.9| Mouse DNA sequence from clone RP23-201G13 on chromosome 2, complete sequence Length = 195221 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 318 atgcaggaggagcagccactg 338 ||||||||||||||||||||| Sbjct: 105976 atgcaggaggagcagccactg 105996
>gb|AC167664.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940124D9, complete sequence Length = 118889 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 gccgagaaggagatcaaggag 221 ||||||||||||||||||||| Sbjct: 101311 gccgagaaggagatcaaggag 101291
>ref|NM_104256.2| Arabidopsis thaliana unknown protein AT1G53790 mRNA, complete cds Length = 1396 Score = 40.1 bits (20), Expect = 8.1 Identities = 41/48 (85%) Strand = Plus / Plus Query: 233 gatcaatgacctttgtgggataaaggagtctgatactgggctagctcc 280 |||||| || || ||||| || ||||||||||||||||| ||||||| Sbjct: 190 gatcaacgatctatgtggtatcaaggagtctgatactggtttagctcc 237
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ggccgagaaggagatcaagg 219 |||||||||||||||||||| Sbjct: 2373183 ggccgagaaggagatcaagg 2373164
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 197 gacggccgagaaggagatcaagga 220 |||||||| ||||||||||||||| Sbjct: 1715906 gacggccgcgaaggagatcaagga 1715883
>ref|XM_526309.1| PREDICTED: Pan troglodytes similar to proteasome (prosome, macropain) 26S subunit, ATPase 2; Proteasome (prosome, macropain) 26S subunit, ATPase (LOC470926), mRNA Length = 1200 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgt 484 ||||| ||||| |||||||||||||| ||||| Sbjct: 394 actgacattgaagaagggatgagagtaggtgt 425
>gb|AY440779.1| Armigeres subalbatus ASAP ID: 39443 unknown mRNA sequence Length = 332 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 acgacatcatggcggagaagaacc 123 |||||||||| ||||||||||||| Sbjct: 93 acgacatcatcgcggagaagaacc 116
>gb|AC149234.1| Pan troglodytes chromosome X clone PTB-085L05 map human ortholog q28, complete sequence Length = 186825 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 ccagacaccgccagcgcccgccgc 68 ||||||||| |||||||||||||| Sbjct: 5040 ccagacacctccagcgcccgccgc 5063
>gb|AC149233.1| Pan troglodytes chromosome X clone RP43-034P07 map human ortholog q28, complete sequence Length = 169963 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 ccagacaccgccagcgcccgccgc 68 ||||||||| |||||||||||||| Sbjct: 112286 ccagacacctccagcgcccgccgc 112309
>ref|XM_657518.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5006.2), mRNA Length = 4935 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 cagatgatgcaggaggagca 331 |||||||||||||||||||| Sbjct: 1105 cagatgatgcaggaggagca 1124
>emb|AJ865305.1| Cocos nucifera microsatellite DNA, clone CnCir 226 Length = 470 Score = 40.1 bits (20), Expect = 8.1 Identities = 44/52 (84%) Strand = Plus / Plus Query: 418 agtttgttgttggattgggtgataaagtttccccaactgatattgaggaagg 469 ||||||| ||||| |||||||| ||||| || | ||||||||||| ||||| Sbjct: 391 agtttgtggttggcttgggtgacaaagtctctctgactgatattgaagaagg 442
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 acccgcgccccctcgacgaggacg 144 |||||||| ||||||||||||||| Sbjct: 349032 acccgcgcaccctcgacgaggacg 349055
>ref|XM_384228.1| Gibberella zeae PH-1 chromosome 2 conserved hypothetical protein (FG04052.1) partial mRNA Length = 207 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 131 cctcgacgaggacgacatcgccctcctc 158 |||||||||||||||||| ||| ||||| Sbjct: 69 cctcgacgaggacgacatggccttcctc 96
>ref|XM_445972.1| Candida glabrata CBS138, CAGL0E06490g partial mRNA Length = 1419 Score = 40.1 bits (20), Expect = 8.1 Identities = 86/108 (79%) Strand = Plus / Plus Query: 381 gatgccaaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggtgat 440 |||||||||||| |||| || | || ||||| ||||| ||||| || || |||||||| Sbjct: 439 gatgccaaatacgtgattaacttgaagcaaatcgcaaaatttgtcgtagggttgggtgag 498 Query: 441 aaagtttccccaactgatattgaggaagggatgagagtcggtgttgat 488 | ||| || || || || || || ||||| |||||||| ||||||||| Sbjct: 499 agagtctctcccacagacatagaagaaggtatgagagttggtgttgat 546
>gb|AC117409.4| Homo sapiens 3 BAC RP11-64K7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154336 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgt 484 ||||| ||||| |||||||||||||| ||||| Sbjct: 135262 actgacattgaagaagggatgagagtaggtgt 135293
>gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cds, alternatively spliced Length = 1285452 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 aatacatgatcaatgtaaaa 407 |||||||||||||||||||| Sbjct: 682490 aatacatgatcaatgtaaaa 682471
>emb|Y14317.1|SRFRPS Streptomyces reticuli furS and cpeB genes Length = 2904 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 133 tcgacgaggacgacatcgccctcctcaagacc 164 ||||||| | |||||||||| ||||||||||| Sbjct: 1918 tcgacgacgccgacatcgccatcctcaagacc 1949
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 40.1 bits (20), Expect = 8.1 Identities = 86/108 (79%) Strand = Plus / Plus Query: 381 gatgccaaatacatgatcaatgtaaaacaaattgcaaagtttgttgttggattgggtgat 440 |||||||||||| |||| || | || ||||| ||||| ||||| || || |||||||| Sbjct: 650027 gatgccaaatacgtgattaacttgaagcaaatcgcaaaatttgtcgtagggttgggtgag 650086 Query: 441 aaagtttccccaactgatattgaggaagggatgagagtcggtgttgat 488 | ||| || || || || || || ||||| |||||||| ||||||||| Sbjct: 650087 agagtctctcccacagacatagaagaaggtatgagagttggtgttgat 650134
>emb|AJ719466.1| Gallus gallus mRNA for hypothetical protein, clone 2j13 Length = 1466 Score = 40.1 bits (20), Expect = 8.1 Identities = 110/140 (78%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagatt 512 ||||| ||||| ||||| |||||||| || || || | |||||||| || || || || Sbjct: 430 actgacattgaagaaggcatgagagttggagtggacagaaacaagtatcaaatccacatc 489 Query: 513 ccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaaccagat 572 || ||||| || |||||||| |||| ||||| |||||| || || || ||||||||| Sbjct: 490 cccttgcctccaaagattgatcccacagtcaccatgatgcaagtagaagaaaaaccagat 549 Query: 573 gtcacgtataatgatgttgg 592 ||||| |||| ||| ||||| Sbjct: 550 gtcacttatagtgacgttgg 569
>ref|NM_001006225.1| Gallus gallus proteasome (prosome, macropain) 26S subunit, ATPase, 2 (PSMC2), mRNA Length = 1466 Score = 40.1 bits (20), Expect = 8.1 Identities = 110/140 (78%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgttgatcggaacaagtaccagattcagatt 512 ||||| ||||| ||||| |||||||| || || || | |||||||| || || || || Sbjct: 430 actgacattgaagaaggcatgagagttggagtggacagaaacaagtatcaaatccacatc 489 Query: 513 ccgttgccaccgaagattgaccccagcgtcactatgatgacggttgaggagaaaccagat 572 || ||||| || |||||||| |||| ||||| |||||| || || || ||||||||| Sbjct: 490 cccttgcctccaaagattgatcccacagtcaccatgatgcaagtagaagaaaaaccagat 549 Query: 573 gtcacgtataatgatgttgg 592 ||||| |||| ||| ||||| Sbjct: 550 gtcacttatagtgacgttgg 569
>gb|AC073021.12| Homo sapiens 3 BAC RP11-250B16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183155 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 453 actgatattgaggaagggatgagagtcggtgt 484 ||||| ||||| |||||||||||||| ||||| Sbjct: 59359 actgacattgaagaagggatgagagtaggtgt 59390
>gb|DQ397830.1| Cenarchaeum symbiosum clone C01C10, complete sequence Length = 40511 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 aagacggccgagaaggagatcaag 218 |||||||||||||||||| ||||| Sbjct: 36097 aagacggccgagaaggagctcaag 36120
>gb|AC021909.7| Homo sapiens, clone RP11-22F19, complete sequence Length = 178621 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 aatacatgatcaatgtaaaa 407 |||||||||||||||||||| Sbjct: 146664 aatacatgatcaatgtaaaa 146645
>tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene, alternatively spliced, complete cds Length = 1421559 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 aatacatgatcaatgtaaaa 407 |||||||||||||||||||| Sbjct: 682490 aatacatgatcaatgtaaaa 682471
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 ccgccagcgcccgccgccga 71 |||||||||||||||||||| Sbjct: 25314497 ccgccagcgcccgccgccga 25314478 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 ccgccagcgcccgccgccga 71 |||||||||||||||||||| Sbjct: 6867301 ccgccagcgcccgccgccga 6867282
>gb|AC007365.3| Homo sapiens BAC clone RP11-451M22 from 2, complete sequence Length = 184285 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 acatcgccctcctcaagacctacg 168 ||||| |||||||||||||||||| Sbjct: 62924 acatcaccctcctcaagacctacg 62901
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 ccgccagcgcccgccgccga 71 |||||||||||||||||||| Sbjct: 67222 ccgccagcgcccgccgccga 67203
>gb|AC122771.10| Mus musculus chromosome 1, clone RP24-156G20, complete sequence Length = 207446 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 caggaggagcagccactgca 340 |||||||||||||||||||| Sbjct: 147207 caggaggagcagccactgca 147188
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 ccgccagcgcccgccgccga 71 |||||||||||||||||||| Sbjct: 25242673 ccgccagcgcccgccgccga 25242654 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 ccgccagcgcccgccgccga 71 |||||||||||||||||||| Sbjct: 6867180 ccgccagcgcccgccgccga 6867161
>emb|AL731740.4|CNS08C7P Oryza sativa chromosome 12, . BAC OSJNBb0001P19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144563 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 ccgccagcgcccgccgccga 71 |||||||||||||||||||| Sbjct: 94737 ccgccagcgcccgccgccga 94756
>emb|AL590443.1|CNS07EGA chromosome III of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 194439 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 463 aggaagggatgagagtcggtgttgatcggaacaagtaccagatt 506 |||| |||||||| || || |||||| | ||||||||||||||| Sbjct: 155445 aggaggggatgagggtaggagttgatagaaacaagtaccagatt 155488
>emb|AL732535.4|CNS08C9A Oryza sativa chromosome 12, . BAC OSJNBa0035N13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158927 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 ccgccagcgcccgccgccga 71 |||||||||||||||||||| Sbjct: 22693 ccgccagcgcccgccgccga 22712
>gb|AF068761.1|AF068761 Nocardia corallina NcoI DNA modification methyltransferase (ncoIM) and NcoI restriction endonuclease (ncoIR) genes, complete cds Length = 2659 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 gattccgttgccaccgaaga 528 |||||||||||||||||||| Sbjct: 2027 gattccgttgccaccgaaga 2008
>emb|AL592209.3|HS1164K7 Homo sapiens chromosome 3 from BAC RPCI-11 1164K7 map 3q21 region D3S3607-D3S1290, complete sequence Length = 154341 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 453 actgatattgaggaagggatgagagtcggtgt 484 ||||| ||||| |||||||||||||| ||||| Sbjct: 19070 actgacattgaagaagggatgagagtaggtgt 19039
>emb|Z78012.1|CEC52E4 Caenorhabditis elegans Cosmid C52E4, complete sequence Length = 33089 Score = 40.1 bits (20), Expect = 8.1 Identities = 83/104 (79%) Strand = Plus / Minus Query: 471 atgagagtcggtgttgatcggaacaagtaccagattcagattccgttgccaccgaagatt 530 |||||||| || || || || |||||||| || ||||| |||||||||| | || ||| Sbjct: 17842 atgagagtaggagtagaccgtaacaagtatcaaattcatcttccgttgcccgccaaaatt 17783 Query: 531 gaccccagcgtcactatgatgacggttgaggagaaaccagatgt 574 || || | |||||| |||||| |||||| || ||||||||||| Sbjct: 17782 gatccaaccgtcacaatgatgcaggttgaagaaaaaccagatgt 17739
>emb|AL844863.7| Mouse DNA sequence from clone RP23-273C23 on chromosome X, complete sequence Length = 143387 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 agaaggagatcaaggagttg 224 |||||||||||||||||||| Sbjct: 31982 agaaggagatcaaggagttg 32001
>gb|M24493.1|BACGAPDHA B.stearothermophilus glyceraldehyde-3-phosphate dehydrogenase gene, complete cds Length = 3541 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 ccgccagcgcccgccgccga 71 |||||||||||||||||||| Sbjct: 1102 ccgccagcgcccgccgccga 1083 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,499,980 Number of Sequences: 3902068 Number of extensions: 4499980 Number of successful extensions: 95308 Number of sequences better than 10.0: 194 Number of HSP's better than 10.0 without gapping: 192 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 94343 Number of HSP's gapped (non-prelim): 941 length of query: 596 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 573 effective length of database: 17,143,297,704 effective search space: 9823109584392 effective search space used: 9823109584392 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
