ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd27d03 |
|---|---|
| Clone Library Name | barley_pub |
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 277 bits (709), Expect = 1e-74 Identities = 132/142 (92%), Positives = 137/142 (96%) Frame = +1 Query: 97 GKAVKNMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEF 276 GKAVKN+ SAL G+ARV MRKTAAKAKQV+SSSPWYG+DRVLYLGPLSGEPPSYLTGEF Sbjct: 15 GKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEF 74 Query: 277 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 456 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA WFKA Sbjct: 75 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKA 134 Query: 457 GSQIFSEGGLDYLGNPSLVHAQ 522 GSQIFS+GGLDYLGNPSLVHAQ Sbjct: 135 GSQIFSDGGLDYLGNPSLVHAQ 156
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 263 bits (673), Expect = 2e-70 Identities = 130/143 (90%), Positives = 133/143 (93%), Gaps = 1/143 (0%) Frame = +1 Query: 97 GKAVKNMALSALFGEARVTMRKTAAKAKQVASS-SPWYGADRVLYLGPLSGEPPSYLTGE 273 GKAV S+ FGEARVTMRKTAAKAK A+S SPWYG DRVLYLGPLSGEPPSYLTGE Sbjct: 15 GKAVN--VPSSSFGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGE 72 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 453 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 73 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 132 Query: 454 AGSQIFSEGGLDYLGNPSLVHAQ 522 AGSQIFSEGGLDYLGNPSL+HAQ Sbjct: 133 AGSQIFSEGGLDYLGNPSLIHAQ 155
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 263 bits (672), Expect = 2e-70 Identities = 131/143 (91%), Positives = 133/143 (93%), Gaps = 1/143 (0%) Frame = +1 Query: 97 GKAVKNMALSALFGEARVTMRKTAAKAKQVASS-SPWYGADRVLYLGPLSGEPPSYLTGE 273 GKAV S+LFGEARVTMRKTAAKAK ASS SPWYG DRVLYLGPLSGEPPSYLTGE Sbjct: 15 GKAVN--VPSSLFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGE 72 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 453 FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 73 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 132 Query: 454 AGSQIFSEGGLDYLGNPSLVHAQ 522 AGSQIFSEGGLDYLGNPSL+HAQ Sbjct: 133 AGSQIFSEGGLDYLGNPSLIHAQ 155
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 263 bits (671), Expect = 3e-70 Identities = 127/134 (94%), Positives = 129/134 (96%), Gaps = 1/134 (0%) Frame = +1 Query: 124 SALFGEARVTMRKTAAKAKQVASS-SPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 300 SALFGEAR+TMRKTAAK K ASS SPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT Sbjct: 22 SALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 81 Query: 301 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 480 AGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG Sbjct: 82 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 141 Query: 481 GLDYLGNPSLVHAQ 522 GLDYLGNPSL+HAQ Sbjct: 142 GLDYLGNPSLIHAQ 155
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 261 bits (666), Expect = 1e-69 Identities = 123/140 (87%), Positives = 129/140 (92%) Frame = +1 Query: 103 AVKNMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPG 282 A+ A + +FGE R+TMRK+AAK K AS SPWYGADRVLYLGPLSGEPPSYLTGEFPG Sbjct: 12 ALAGKAAAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPG 71 Query: 283 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 462 DYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGS Sbjct: 72 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 131 Query: 463 QIFSEGGLDYLGNPSLVHAQ 522 QIFSEGGLDYLGNPSL+HAQ Sbjct: 132 QIFSEGGLDYLGNPSLIHAQ 151
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 258 bits (658), Expect = 9e-69 Identities = 125/143 (87%), Positives = 127/143 (88%), Gaps = 1/143 (0%) Frame = +1 Query: 97 GKAVK-NMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGE 273 GKAVK S + GE R+TMRKTA K K V SSSPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGE 74 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 453 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134 Query: 454 AGSQIFSEGGLDYLGNPSLVHAQ 522 AGSQIFSEGGLDYLGNPSLVHAQ Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQ 157
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 256 bits (654), Expect = 3e-68 Identities = 124/143 (86%), Positives = 130/143 (90%), Gaps = 1/143 (0%) Frame = +1 Query: 97 GKAVK-NMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGE 273 GKAVK + + S + G +VTMRKTA+KAK V+S SPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 74 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 453 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134 Query: 454 AGSQIFSEGGLDYLGNPSLVHAQ 522 AGSQIFSEGGLDYLGNPSLVHAQ Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQ 157
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 256 bits (653), Expect = 3e-68 Identities = 124/143 (86%), Positives = 130/143 (90%), Gaps = 1/143 (0%) Frame = +1 Query: 97 GKAVK-NMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGE 273 GKAVK + + S + G +VTMRKTA+KAK V+S SPWYG DRV YLGP SGE PSYLTGE Sbjct: 14 GKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 73 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 453 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 74 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 133 Query: 454 AGSQIFSEGGLDYLGNPSLVHAQ 522 AGSQIFSEGGLDYLGNPSLVHAQ Sbjct: 134 AGSQIFSEGGLDYLGNPSLVHAQ 156
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 255 bits (652), Expect = 5e-68 Identities = 124/143 (86%), Positives = 128/143 (89%), Gaps = 1/143 (0%) Frame = +1 Query: 97 GKAVK-NMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGE 273 GKAVK + + S + G RVTMRKTA KAK +S SPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGE 74 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 453 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134 Query: 454 AGSQIFSEGGLDYLGNPSLVHAQ 522 AGSQIFSEGGLDYLGNPSLVHAQ Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQ 157
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 254 bits (650), Expect = 8e-68 Identities = 124/143 (86%), Positives = 129/143 (90%), Gaps = 1/143 (0%) Frame = +1 Query: 97 GKAVK-NMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGE 273 GKAVK + + S + G +VTMRKTA KAK V+S SPWYG DRV YLGP SGE PSYLTGE Sbjct: 14 GKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 73 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 453 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 74 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 133 Query: 454 AGSQIFSEGGLDYLGNPSLVHAQ 522 AGSQIFSEGGLDYLGNPSLVHAQ Sbjct: 134 AGSQIFSEGGLDYLGNPSLVHAQ 156 Score = 30.8 bits (68), Expect = 2.4 Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 5/114 (4%) Frame = +1 Query: 97 GKAVKNMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPL-----SGEPPSY 261 G+AV A S +F E + + + + W A +V+ +G + +GEP Sbjct: 127 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIW--ACQVVLMGAVEGYRVAGEPLGE 184 Query: 262 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 423 + +D GL+ DPE FA+ + E+ + R AM G L+ G Sbjct: 185 VVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKG 238
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 253 bits (646), Expect = 2e-67 Identities = 122/143 (85%), Positives = 128/143 (89%), Gaps = 1/143 (0%) Frame = +1 Query: 97 GKAVK-NMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGE 273 GKAVK + + S + G +VTMRKT KAK ++S SPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGE 74 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 453 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134 Query: 454 AGSQIFSEGGLDYLGNPSLVHAQ 522 AGSQIFSEGGLDYLGNPSLVHAQ Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQ 157
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 253 bits (646), Expect = 2e-67 Identities = 122/143 (85%), Positives = 130/143 (90%), Gaps = 1/143 (0%) Frame = +1 Query: 97 GKAVK-NMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGE 273 GKAVK + + S + G +VTMRKTA+KAK V+SSSPWYG +RV YLGP SGE PSYLTGE Sbjct: 15 GKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGE 74 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 453 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134 Query: 454 AGSQIFSEGGLDYLGNPSLVHAQ 522 GSQIFS+GGLDYLGNPSLVHAQ Sbjct: 135 GGSQIFSQGGLDYLGNPSLVHAQ 157 Score = 29.6 bits (65), Expect = 5.3 Identities = 17/62 (27%), Positives = 28/62 (45%) Frame = +1 Query: 238 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 417 ++GEP + +D GL+ DPE FA+ + E+ + R AM G ++ Sbjct: 178 VAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237 Query: 418 NG 423 G Sbjct: 238 KG 239
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 252 bits (644), Expect = 4e-67 Identities = 120/142 (84%), Positives = 124/142 (87%) Frame = +1 Query: 97 GKAVKNMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEF 276 GKAV + S + G + TMRKT KAK V+S SPWYG DRV YLGP SGE PSYLTGEF Sbjct: 15 GKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 74 Query: 277 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 456 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNGVKFGEAVWFKA Sbjct: 75 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKA 134 Query: 457 GSQIFSEGGLDYLGNPSLVHAQ 522 GSQIFSEGGLDYLGNPSLVHAQ Sbjct: 135 GSQIFSEGGLDYLGNPSLVHAQ 156
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 249 bits (637), Expect = 2e-66 Identities = 121/143 (84%), Positives = 126/143 (88%), Gaps = 1/143 (0%) Frame = +1 Query: 97 GKAVK-NMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGE 273 GKAVK + + S + G + TMRKT KAK V+S SPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 453 FPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 75 FPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134 Query: 454 AGSQIFSEGGLDYLGNPSLVHAQ 522 AGSQIFSEGGLDYLGNPSLVHAQ Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQ 157
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 249 bits (636), Expect = 3e-66 Identities = 119/143 (83%), Positives = 126/143 (88%), Gaps = 1/143 (0%) Frame = +1 Query: 97 GKAVK-NMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGE 273 GKAVK + + S + G +VTMRKT KAK +SSSPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGE 74 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 453 FP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNG+KFGEAVWFK Sbjct: 75 FPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFK 134 Query: 454 AGSQIFSEGGLDYLGNPSLVHAQ 522 AG+QIFSEGGLDYLGNPSLVHAQ Sbjct: 135 AGAQIFSEGGLDYLGNPSLVHAQ 157
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 249 bits (636), Expect = 3e-66 Identities = 116/130 (89%), Positives = 119/130 (91%) Frame = +1 Query: 133 FGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 312 FGE R+TMRKT K K AS SPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLS Sbjct: 23 FGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 82 Query: 313 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 492 ADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDY Sbjct: 83 ADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY 142 Query: 493 LGNPSLVHAQ 522 LGNPSL+HAQ Sbjct: 143 LGNPSLIHAQ 152
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 249 bits (635), Expect = 4e-66 Identities = 120/143 (83%), Positives = 125/143 (87%), Gaps = 1/143 (0%) Frame = +1 Query: 97 GKAVK-NMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGE 273 GK VK + + S + G + TMRKTA KAK V+S SPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 453 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNGVKFGEAVW K Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLK 134 Query: 454 AGSQIFSEGGLDYLGNPSLVHAQ 522 AGSQIFSEGGLDYLGNPSLVHAQ Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQ 157
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 248 bits (634), Expect = 6e-66 Identities = 120/143 (83%), Positives = 125/143 (87%), Gaps = 1/143 (0%) Frame = +1 Query: 97 GKAVK-NMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGE 273 G AVK + + S + G + MRKT KAK V+S SPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 453 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134 Query: 454 AGSQIFSEGGLDYLGNPSLVHAQ 522 AGSQIFSEGGLDYLGNPSLVHAQ Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQ 157
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 246 bits (629), Expect = 2e-65 Identities = 122/143 (85%), Positives = 127/143 (88%), Gaps = 1/143 (0%) Frame = +1 Query: 97 GKAVK-NMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGE 273 G+AVK + + + G RV+MRKT AK VASSSPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GQAVKLSPSAPEITGNGRVSMRKTVAKP--VASSSPWYGPDRVKYLGPFSGESPSYLTGE 72 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 453 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 73 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 132 Query: 454 AGSQIFSEGGLDYLGNPSLVHAQ 522 AGSQIFSEGGLDYLGNPSLVHAQ Sbjct: 133 AGSQIFSEGGLDYLGNPSLVHAQ 155
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 246 bits (629), Expect = 2e-65 Identities = 121/143 (84%), Positives = 125/143 (87%), Gaps = 1/143 (0%) Frame = +1 Query: 97 GKAVK-NMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGE 273 GKAVK + S +FG RVTMRKT S SPWYG+DRV YLGP SGEPPSYLTGE Sbjct: 15 GKAVKLSPGASEVFGTGRVTMRKTVKPTGP--SGSPWYGSDRVKYLGPFSGEPPSYLTGE 72 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 453 FPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 73 FPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 132 Query: 454 AGSQIFSEGGLDYLGNPSLVHAQ 522 AGSQIFSEGGLDYLGNPSLVHAQ Sbjct: 133 AGSQIFSEGGLDYLGNPSLVHAQ 155
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 246 bits (629), Expect = 2e-65 Identities = 118/134 (88%), Positives = 122/134 (91%), Gaps = 1/134 (0%) Frame = +1 Query: 124 SALFGEARVTMRK-TAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 300 + + GEARVTMRK T K AS+SPWYG DRVLYLGP SGEPPSYLTGEFPGDYGWDT Sbjct: 31 AGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDT 90 Query: 301 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 480 AGLSADPE FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEG Sbjct: 91 AGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG 150 Query: 481 GLDYLGNPSLVHAQ 522 GLDYLGNPSLVHAQ Sbjct: 151 GLDYLGNPSLVHAQ 164
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 245 bits (626), Expect = 5e-65 Identities = 121/143 (84%), Positives = 126/143 (88%), Gaps = 1/143 (0%) Frame = +1 Query: 97 GKAVK-NMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGE 273 G+AVK + + S + G R+TMRK A AK SSSPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GQAVKLSPSASEISGNGRITMRK--AVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGE 72 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 453 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 73 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 132 Query: 454 AGSQIFSEGGLDYLGNPSLVHAQ 522 AGSQIFSEGGLDYLGNPSLVHAQ Sbjct: 133 AGSQIFSEGGLDYLGNPSLVHAQ 155
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 244 bits (623), Expect = 1e-64 Identities = 121/143 (84%), Positives = 126/143 (88%), Gaps = 1/143 (0%) Frame = +1 Query: 97 GKAVK-NMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGE 273 GKAVK + A S + G RVTMRKT AK K S SPWYG+DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYLGPFSGESPSYLTGE 73 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 453 FPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 74 FPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 133 Query: 454 AGSQIFSEGGLDYLGNPSLVHAQ 522 AGSQIFS+GGLDYLGNPSLVHAQ Sbjct: 134 AGSQIFSDGGLDYLGNPSLVHAQ 156
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 244 bits (622), Expect = 1e-64 Identities = 116/142 (81%), Positives = 121/142 (85%) Frame = +1 Query: 97 GKAVKNMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEF 276 GKAV + S + +VTMRKT KAK V+S SPWYG DRV YLGP SGE PSYLTGEF Sbjct: 15 GKAVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 74 Query: 277 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 456 PGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPEL ARNGVKFGEAVWFKA Sbjct: 75 PGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKA 134 Query: 457 GSQIFSEGGLDYLGNPSLVHAQ 522 GSQIF EGGLDYLGNPSLVHAQ Sbjct: 135 GSQIFKEGGLDYLGNPSLVHAQ 156
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 242 bits (618), Expect = 4e-64 Identities = 120/143 (83%), Positives = 125/143 (87%), Gaps = 1/143 (0%) Frame = +1 Query: 97 GKAVK-NMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGE 273 GKAV + A S + G RVTMRKT AK K S SPWYG+DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVNLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYLGPFSGESPSYLTGE 73 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 453 FPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 74 FPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 133 Query: 454 AGSQIFSEGGLDYLGNPSLVHAQ 522 AGSQIFS+GGLDYLGNPSLVHAQ Sbjct: 134 AGSQIFSDGGLDYLGNPSLVHAQ 156
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 241 bits (616), Expect = 7e-64 Identities = 113/131 (86%), Positives = 117/131 (89%) Frame = +1 Query: 130 LFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGL 309 +FGE R+TMRKTAAK K S SPWYGADRVLYLGPLSG PPSYLTGEFPGDYGWDT GL Sbjct: 24 VFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGL 83 Query: 310 SADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLD 489 SADPETFAKNRELEVIHCRWA+ LGCVFPELLARNGVKFGE VWFKAGSQIFSEGGL Sbjct: 84 SADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKAGSQIFSEGGLS 143 Query: 490 YLGNPSLVHAQ 522 + GNPSLVHAQ Sbjct: 144 HPGNPSLVHAQ 154
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 241 bits (616), Expect = 7e-64 Identities = 119/143 (83%), Positives = 127/143 (88%), Gaps = 1/143 (0%) Frame = +1 Query: 97 GKAVK-NMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGE 273 G+AVK + + G A+ TMRKTA+K+ V+S SPWYG DRV YLGP SGEPPSYLTGE Sbjct: 5 GQAVKLSPNAPEIQGNAKFTMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 62 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 453 FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFK Sbjct: 63 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 122 Query: 454 AGSQIFSEGGLDYLGNPSLVHAQ 522 AGSQIFSEGGLDYLGNPSLVHAQ Sbjct: 123 AGSQIFSEGGLDYLGNPSLVHAQ 145
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 241 bits (615), Expect = 9e-64 Identities = 121/143 (84%), Positives = 123/143 (86%), Gaps = 1/143 (0%) Frame = +1 Query: 97 GKAVKNMALSA-LFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGE 273 GKAVK S+ LFG RV+MRKT K S SPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKVAPSSSELFGNGRVSMRKTV---KAPVSDSPWYGPDRVKYLGPFSGEAPSYLTGE 71 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 453 FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 72 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 131 Query: 454 AGSQIFSEGGLDYLGNPSLVHAQ 522 AGSQIFSEGGLDYLGNPSLVHAQ Sbjct: 132 AGSQIFSEGGLDYLGNPSLVHAQ 154
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 240 bits (613), Expect = 2e-63 Identities = 120/143 (83%), Positives = 126/143 (88%), Gaps = 1/143 (0%) Frame = +1 Query: 97 GKAVKNMALSA-LFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGE 273 GKAVKN++ S+ + G+ARV+MRKTAA K SPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKNLSSSSEVQGDARVSMRKTAATKKV---GSPWYGPDRVKYLGPFSGESPSYLTGE 71 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 453 FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 72 FPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFK 131 Query: 454 AGSQIFSEGGLDYLGNPSLVHAQ 522 GSQIFSEGGL YLGNPSLVHAQ Sbjct: 132 KGSQIFSEGGLQYLGNPSLVHAQ 154
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 240 bits (613), Expect = 2e-63 Identities = 116/142 (81%), Positives = 121/142 (85%) Frame = +1 Query: 97 GKAVKNMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEF 276 GK +K S G AR TMRK+A K +S SPWYG DRV YLGP SGE PSYLTGEF Sbjct: 18 GKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEF 77 Query: 277 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 456 PGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKA Sbjct: 78 PGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 137 Query: 457 GSQIFSEGGLDYLGNPSLVHAQ 522 GSQIFSEGGLDYLGNPSLVHAQ Sbjct: 138 GSQIFSEGGLDYLGNPSLVHAQ 159
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 239 bits (611), Expect = 3e-63 Identities = 119/142 (83%), Positives = 124/142 (87%) Frame = +1 Query: 97 GKAVKNMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEF 276 GKAVK + G RV+MRKT K QV+S SPWYG DRV YLGP SGEPPSYLTGEF Sbjct: 16 GKAVKLGPSAPEVG--RVSMRKTVTK--QVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 71 Query: 277 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 456 PGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKA Sbjct: 72 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 131 Query: 457 GSQIFSEGGLDYLGNPSLVHAQ 522 GSQIFSEGGLDYLGNPSL+HAQ Sbjct: 132 GSQIFSEGGLDYLGNPSLIHAQ 153
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 238 bits (608), Expect = 6e-63 Identities = 113/137 (82%), Positives = 119/137 (86%), Gaps = 1/137 (0%) Frame = +1 Query: 115 MALSALFGEARVTMRKTAAKAKQVAS-SSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYG 291 + + GEAR+TMRK K AS SPWYG DRVLYLGP SGEPPSYLTGEFPGDYG Sbjct: 32 LGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYG 91 Query: 292 WDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIF 471 WDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIF Sbjct: 92 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIF 151 Query: 472 SEGGLDYLGNPSLVHAQ 522 SEGGLDYLG+P L+HAQ Sbjct: 152 SEGGLDYLGSPQLIHAQ 168
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 238 bits (607), Expect = 7e-63 Identities = 117/144 (81%), Positives = 122/144 (84%), Gaps = 2/144 (1%) Frame = +1 Query: 97 GKAVKNMA--LSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTG 270 GK V+ A S G AR TMRK+A K +S SPWYG DRV YLGP SGE PSYLTG Sbjct: 15 GKPVETSANPSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTG 74 Query: 271 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 450 EFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWF Sbjct: 75 EFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWF 134 Query: 451 KAGSQIFSEGGLDYLGNPSLVHAQ 522 KAGSQIFSEGGLDYLGNPSLVHAQ Sbjct: 135 KAGSQIFSEGGLDYLGNPSLVHAQ 158
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 236 bits (603), Expect = 2e-62 Identities = 111/137 (81%), Positives = 119/137 (86%), Gaps = 1/137 (0%) Frame = +1 Query: 115 MALSALFGEARVTMRKTAAKAKQVAS-SSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYG 291 + + GEAR+TMRK + AS SPWYG DRV+YLGP SGEPPSYLTGEFPGDYG Sbjct: 32 LGVGGAHGEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYG 91 Query: 292 WDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIF 471 WDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIF Sbjct: 92 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIF 151 Query: 472 SEGGLDYLGNPSLVHAQ 522 SEGGLDYLG+P L+HAQ Sbjct: 152 SEGGLDYLGSPQLIHAQ 168
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 235 bits (600), Expect = 5e-62 Identities = 113/129 (87%), Positives = 117/129 (90%) Frame = +1 Query: 136 GEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSA 315 G RV+MRKTA+K V+S SPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSA Sbjct: 9 GVGRVSMRKTASKT--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSA 66 Query: 316 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 495 DPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEA WFKAGSQIFSEGGLDYL Sbjct: 67 DPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSEGGLDYL 126 Query: 496 GNPSLVHAQ 522 GN SL+HAQ Sbjct: 127 GNQSLIHAQ 135
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 226 bits (575), Expect = 4e-59 Identities = 106/130 (81%), Positives = 114/130 (87%) Frame = +1 Query: 133 FGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 312 FGE R+TMR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 30 FGEGRITMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85 Query: 313 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 492 ADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGSQIFSEGGLDY Sbjct: 86 ADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDY 145 Query: 493 LGNPSLVHAQ 522 LGNP+LVHAQ Sbjct: 146 LGNPNLVHAQ 155
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 224 bits (570), Expect = 1e-58 Identities = 110/141 (78%), Positives = 117/141 (82%) Frame = +1 Query: 100 KAVKNMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFP 279 K V ++ GEARV M +KA S S WYG+DR LYLGP SG PPSYL+GEFP Sbjct: 18 KPVNELSRKVGAGEARVQMMAPKSKAP---SGSIWYGSDRPLYLGPFSGSPPSYLSGEFP 74 Query: 280 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 459 GDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAG Sbjct: 75 GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAG 134 Query: 460 SQIFSEGGLDYLGNPSLVHAQ 522 SQIF+EGGLDYLGNPSLVHAQ Sbjct: 135 SQIFAEGGLDYLGNPSLVHAQ 155
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 221 bits (564), Expect = 7e-58 Identities = 104/115 (90%), Positives = 107/115 (93%) Frame = +1 Query: 178 KQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 357 K +SSSPW+G D V YLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI Sbjct: 4 KVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 63 Query: 358 HCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 522 H RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ Sbjct: 64 HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 118
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 219 bits (558), Expect = 4e-57 Identities = 103/130 (79%), Positives = 111/130 (85%) Frame = +1 Query: 133 FGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 312 FG R TMR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 30 FGGGRATMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85 Query: 313 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 492 ADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKAGSQIFSEGGLDY Sbjct: 86 ADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDY 145 Query: 493 LGNPSLVHAQ 522 LGNP+L+HAQ Sbjct: 146 LGNPNLIHAQ 155
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 219 bits (558), Expect = 4e-57 Identities = 103/130 (79%), Positives = 111/130 (85%) Frame = +1 Query: 133 FGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 312 F R TMR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 30 FNGGRATMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85 Query: 313 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 492 ADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGSQIFSEGGLDY Sbjct: 86 ADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDY 145 Query: 493 LGNPSLVHAQ 522 LGNP+L+HAQ Sbjct: 146 LGNPNLIHAQ 155
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 218 bits (556), Expect = 6e-57 Identities = 103/129 (79%), Positives = 112/129 (86%) Frame = +1 Query: 136 GEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSA 315 G RV+MR+T A +S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSA Sbjct: 31 GGGRVSMRRTVKSAP----TSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSA 86 Query: 316 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 495 DPETFAKNRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGSQIFSEGGLDYL Sbjct: 87 DPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYL 146 Query: 496 GNPSLVHAQ 522 GNP+L+HAQ Sbjct: 147 GNPNLIHAQ 155
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 218 bits (555), Expect = 8e-57 Identities = 104/126 (82%), Positives = 110/126 (87%) Frame = +1 Query: 145 RVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 324 RV+MR+T A + S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPE Sbjct: 33 RVSMRRTIKSAPE----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 88 Query: 325 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 504 TFAKNRELEVIHCRWAMLGALGCVFPELLA+NGVKFGEAVWFKAGSQIF EGGLDYLGNP Sbjct: 89 TFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNP 148 Query: 505 SLVHAQ 522 +LVHAQ Sbjct: 149 NLVHAQ 154
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 218 bits (554), Expect = 1e-56 Identities = 103/130 (79%), Positives = 111/130 (85%) Frame = +1 Query: 133 FGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 312 F RVTMR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 2 FEGGRVTMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 57 Query: 313 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 492 ADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKAGSQIFSEGGLDY Sbjct: 58 ADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDY 117 Query: 493 LGNPSLVHAQ 522 LGNP+L+HAQ Sbjct: 118 LGNPNLIHAQ 127
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 216 bits (549), Expect = 4e-56 Identities = 102/130 (78%), Positives = 111/130 (85%) Frame = +1 Query: 133 FGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 312 FG+AR TMR+T A + S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 30 FGQARFTMRRTVKSAPE----SIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLS 85 Query: 313 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 492 ADPETFA+NRELEVIH RWAMLGALGC FPELL +NGVKFGEAVWFKAGSQIF+EGGLDY Sbjct: 86 ADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDY 145 Query: 493 LGNPSLVHAQ 522 LGNP+L+HAQ Sbjct: 146 LGNPNLIHAQ 155
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 215 bits (547), Expect = 7e-56 Identities = 102/128 (79%), Positives = 113/128 (88%) Frame = +1 Query: 139 EARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 318 EARVTMR+T +K+ S + WYGADR +LGP SGE PSYL GEF GDYGWDTAGLS+D Sbjct: 33 EARVTMRRTVSKS--AGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSD 90 Query: 319 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLG 498 PETFA+NRELEVIH RWAMLGALGC+ PELLA++GVKFGEAVWFKAG+QIFSEGGLDYLG Sbjct: 91 PETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLG 150 Query: 499 NPSLVHAQ 522 NPSLVHAQ Sbjct: 151 NPSLVHAQ 158 Score = 29.3 bits (64), Expect = 6.9 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +1 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 423 +PG +D GL+ DP+TFA+ + E+ + R AM G ++ G Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 214 bits (545), Expect = 1e-55 Identities = 101/126 (80%), Positives = 110/126 (87%) Frame = +1 Query: 145 RVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 324 R+TMR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPE Sbjct: 32 RITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87 Query: 325 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 504 TFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP Sbjct: 88 TFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 147 Query: 505 SLVHAQ 522 +LVHAQ Sbjct: 148 NLVHAQ 153
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 214 bits (544), Expect = 2e-55 Identities = 100/128 (78%), Positives = 110/128 (85%) Frame = +1 Query: 139 EARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 318 +AR+TMR+T A + S WYG DR YLGP S PSYLTGEFPGDYGWDTA +SAD Sbjct: 33 QARITMRRTVRSAPE----SIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSAD 88 Query: 319 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLG 498 PETFAKNRELEVIHCRWAMLGALGCVFPELLA+NG+KFGEAVWFKAG+QIFSEGGLDY G Sbjct: 89 PETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAG 148 Query: 499 NPSLVHAQ 522 NP+L+HAQ Sbjct: 149 NPNLIHAQ 156
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 210 bits (535), Expect = 2e-54 Identities = 99/128 (77%), Positives = 110/128 (85%) Frame = +1 Query: 139 EARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 318 + R +MR+T Q S WYGADR +LGP S + PSYLTGEFPGDYGWDTAGLSAD Sbjct: 31 DGRFSMRRTVKAVPQ----SIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSAD 86 Query: 319 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLG 498 PETFAKNRELEVIH RWAMLGALGC+FPELL++NGV+FGEAVWFKAG+QIFSEGGLDYLG Sbjct: 87 PETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLG 146 Query: 499 NPSLVHAQ 522 NP+LVHAQ Sbjct: 147 NPNLVHAQ 154
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 209 bits (532), Expect = 4e-54 Identities = 108/142 (76%), Positives = 114/142 (80%) Frame = +1 Query: 97 GKAVKNMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEF 276 G+A+K + G RV+MRKTA K V+S SPWYG DRV YLGP SGE PSYLTGEF Sbjct: 15 GQAMKLAPSTPELGVGRVSMRKTAPKT--VSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 72 Query: 277 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 456 G LSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA Sbjct: 73 HG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 124 Query: 457 GSQIFSEGGLDYLGNPSLVHAQ 522 GSQIFSEGGLDYLGNPSL+HAQ Sbjct: 125 GSQIFSEGGLDYLGNPSLIHAQ 146
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 197 bits (502), Expect = 1e-50 Identities = 92/96 (95%), Positives = 93/96 (96%) Frame = +1 Query: 235 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 414 P SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH WAMLGALGCVFPELL+ Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLS 60 Query: 415 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 522 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ Sbjct: 61 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 96
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 189 bits (481), Expect = 3e-48 Identities = 96/134 (71%), Positives = 107/134 (79%), Gaps = 2/134 (1%) Frame = +1 Query: 127 ALFGEARVTMRKTAAKAKQVASSS-PWYGADRVLYLGPLS-GEPPSYLTGEFPGDYGWDT 300 AL + T +KTAAKA SS +YG +R +LGP S P+YLTGEFPGDYGWDT Sbjct: 10 ALQVTCKATGKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDT 69 Query: 301 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 480 AGLSADPETF + RELE+IH RWAMLGALGC PELLA++G KFGEAVWFKAG+QIFSEG Sbjct: 70 AGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEG 129 Query: 481 GLDYLGNPSLVHAQ 522 GLDYLGNPSLVHAQ Sbjct: 130 GLDYLGNPSLVHAQ 143
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 187 bits (474), Expect = 2e-47 Identities = 88/108 (81%), Positives = 94/108 (87%), Gaps = 1/108 (0%) Frame = +1 Query: 202 WYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 381 WYG DRV YLGP S + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG Sbjct: 50 WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLG 109 Query: 382 ALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 522 ALGCVFPE+L + GV+F E VWFKAGSQIFSEGGLDYLGNP+LVHAQ Sbjct: 110 ALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQ 157 Score = 30.8 bits (68), Expect = 2.4 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +1 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 423 +PG +D GL+ DP TFA+ + E+ + R AM G ++ G Sbjct: 191 YPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 186 bits (473), Expect = 3e-47 Identities = 99/137 (72%), Positives = 105/137 (76%) Frame = +1 Query: 112 NMALSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYG 291 N S L A TM K AAK+K +S+ RV YLGP SGE PSYLTGEFPGDYG Sbjct: 27 NPISSTLIVTAGFTMLKHAAKSKVSSSTCD----RRVKYLGPFSGEWPSYLTGEFPGDYG 82 Query: 292 WDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIF 471 WDTAGLSA PETFAKNRELEVIH R AM ALGC+FPELL+ G FGEAVWFKAG+QIF Sbjct: 83 WDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIF 142 Query: 472 SEGGLDYLGNPSLVHAQ 522 SEGGLDYLGNPSLVHAQ Sbjct: 143 SEGGLDYLGNPSLVHAQ 159
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 184 bits (467), Expect = 1e-46 Identities = 88/117 (75%), Positives = 96/117 (82%), Gaps = 1/117 (0%) Frame = +1 Query: 175 AKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 354 A+ S+ WYG DRV YLGP S + PSYL GEFPGDYGWDTAGLSADPE FAKNR LEV Sbjct: 38 ARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV 97 Query: 355 IHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 522 IH RWAMLGALGC+FPE+L + V F E VWFKAGSQIFS+GGLDYLGNP+LVHAQ Sbjct: 98 IHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQ 154 Score = 31.2 bits (69), Expect = 1.8 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +1 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 423 +PG +D GL+ DP TFA+ + E+ + R AM G ++ G Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 180 bits (456), Expect = 2e-45 Identities = 90/141 (63%), Positives = 103/141 (73%), Gaps = 2/141 (1%) Frame = +1 Query: 106 VKNMALSALFGEARVTMRKTAAKAKQVASSS-PWYGADRVLYLGPLSGEPPSYLTGEFPG 282 + N AL+ A+ KA S+ WYG DR +LGP S P+YLTGEFPG Sbjct: 6 ISNRALTVKVEAAKKAAGTKQTKAAPAKSAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPG 65 Query: 283 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAG 459 DYGWDTAGLSADPETF K RELEVIH RWA+LGALG + PELL+ GVKFGE VWFKAG Sbjct: 66 DYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAG 125 Query: 460 SQIFSEGGLDYLGNPSLVHAQ 522 +QIFSEGGLDYLG+P+L+HAQ Sbjct: 126 AQIFSEGGLDYLGSPALIHAQ 146 Score = 30.8 bits (68), Expect = 2.4 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +1 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 423 +PG+ +D GL+ DP+TFA+ + E+ + R AM G ++ G Sbjct: 180 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKG 228
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 164 bits (415), Expect = 1e-40 Identities = 83/139 (59%), Positives = 106/139 (76%), Gaps = 4/139 (2%) Frame = +1 Query: 118 ALSALFGEARVTMRKTAAK--AKQVASSSPWYGADRVLYLGPLS-GEPPSYLTGEFPGDY 288 AL A G + +R+T + A ++ +YG DR +LGP S + P YLTGEFPGDY Sbjct: 3 ALIARSGLKALNIRQTRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDY 62 Query: 289 GWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQ 465 GWDTAGLSADP+TFA+ RE+E+IH RWA+LGALG + PELL++ GV+FGE VWFKAG+Q Sbjct: 63 GWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQ 122 Query: 466 IFSEGGLDYLGNPSLVHAQ 522 IF++GGL+YLGN SL+HAQ Sbjct: 123 IFADGGLNYLGNESLIHAQ 141 Score = 30.4 bits (67), Expect = 3.1 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +1 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 423 +PG +D GL+ DP+TFA+ + E+ + R AM LG ++ G Sbjct: 177 YPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKG 225
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 143 bits (360), Expect = 3e-34 Identities = 74/126 (58%), Positives = 92/126 (73%), Gaps = 2/126 (1%) Frame = +1 Query: 151 TMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETF 330 T + A +K +S++ +YG D L + P TGEFPGDYGWDTAGLSADPETF Sbjct: 40 TKKGAKAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETF 98 Query: 331 AKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGE-AVWFKAGSQIFSEGGLDYLGNP 504 + RELE+IH R +LGALG V PELLA +G+KFG+ A+WFKAG+ IF +GGL+YLGNP Sbjct: 99 KRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNP 158 Query: 505 SLVHAQ 522 SL+HAQ Sbjct: 159 SLIHAQ 164 Score = 32.3 bits (72), Expect = 0.81 Identities = 17/50 (34%), Positives = 28/50 (56%) Frame = +1 Query: 274 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 423 +PG+ +D GL+ DP+TFA+ + E+ + R AM LG ++ G Sbjct: 198 YPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKG 246
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 103 bits (257), Expect = 3e-22 Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 4/128 (3%) Frame = +1 Query: 127 ALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYL--GPLS-GEPPSYLTGEFPGDYGWD 297 ALF + + K+ A ++ + WYG DR ++L G L E P YL GE GDYG+D Sbjct: 37 ALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYD 96 Query: 298 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFS 474 GL PE FAK + E+IH RWAMLGA G + PE L + G G EAVWFK G+ + Sbjct: 97 PFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLD 156 Query: 475 EGGLDYLG 498 L+Y G Sbjct: 157 GNTLNYFG 164
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 83.2 bits (204), Expect = 4e-16 Identities = 42/107 (39%), Positives = 59/107 (55%) Frame = +1 Query: 145 RVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 324 RV+ T A+ + DR L+ PP +L G PGD+G+D GL++DPE Sbjct: 41 RVSKYSTTPTARSATTVCVAADPDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLASDPE 98 Query: 325 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQ 465 + N++ E++HCRWAMLGA G PELL + G+ W+ AG Q Sbjct: 99 SLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGI-LNTPSWYTAGEQ 144
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 79.7 bits (195), Expect = 4e-15 Identities = 35/40 (87%), Positives = 39/40 (97%) Frame = +1 Query: 403 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 522 ELL +NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQ Sbjct: 1 ELLVKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 40
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 78.2 bits (191), Expect = 1e-14 Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 2/116 (1%) Frame = +1 Query: 124 SALFGEARVTMRKTAAK--AKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD 297 ++ G R+ + K A ++ VA S+ DR L+ PP +L G PGD+G+D Sbjct: 32 ASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFP--GSTPPEWLDGSLPGDFGFD 89 Query: 298 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQ 465 GL +DPE+ N + E++H RWAMLGA G PE L + GV W+ AG Q Sbjct: 90 PLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGV-LNTPSWYTAGEQ 144
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 75.1 bits (183), Expect = 1e-13 Identities = 35/76 (46%), Positives = 48/76 (63%) Frame = +1 Query: 241 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 420 + EPP+ LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PELL Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELL--- 249 Query: 421 GVKFGEAVWFKAGSQI 468 G+ WF+AG + Sbjct: 250 ----GKGAWFEAGDSV 261 Score = 72.4 bits (176), Expect = 7e-13 Identities = 35/73 (47%), Positives = 45/73 (61%) Frame = +1 Query: 250 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 429 PP YLTGE GD G+D AGL+ADP TF + + EV HCR +ML +GC+ PELL Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL------ 433 Query: 430 FGEAVWFKAGSQI 468 G WF+ ++ Sbjct: 434 -GNGAWFQIWDKV 445 Score = 63.9 bits (154), Expect = 3e-10 Identities = 31/68 (45%), Positives = 44/68 (64%) Frame = +1 Query: 253 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 432 PS+L GE+ GD G+D AGL+ADP+TF + R EV H R AML +G + P+ L Sbjct: 12 PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYL------- 64 Query: 433 GEAVWFKA 456 G+ +W++A Sbjct: 65 GKGIWYEA 72
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 70.5 bits (171), Expect = 3e-12 Identities = 45/121 (37%), Positives = 60/121 (49%), Gaps = 7/121 (5%) Frame = +1 Query: 163 TAAKAKQVASSSPWYGADRVLYLGPLS-----GEP-PSYLTGEFPGDYGWDTAGLSADPE 324 ++ K+K A+ + GA + +S G+P PSYL G PGD+G+D+ GL P Sbjct: 20 SSTKSKFAAAMPVYVGATNFMSRFSMSADWMPGQPRPSYLDGSAPGDFGFDSLGLGEVPA 79 Query: 325 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGG-LDYLGN 501 + +E E+IHCRWAML G + PE L G W KA GG YLG Sbjct: 80 NLERYKESELIHCRWAMLAVPGIIVPEAL-------GLGNWVKAQEWAAIPGGQATYLGQ 132 Query: 502 P 504 P Sbjct: 133 P 133
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 67.8 bits (164), Expect = 2e-11 Identities = 30/74 (40%), Positives = 46/74 (62%) Frame = +1 Query: 247 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 426 +PP++LTGE+P D G+D ++ADP +A+ R EV H R +ML +G + PELL Sbjct: 167 QPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELL----- 221 Query: 427 KFGEAVWFKAGSQI 468 G+ WF+ G+ + Sbjct: 222 --GKGAWFEVGNSV 233 Score = 38.5 bits (88), Expect = 0.011 Identities = 19/50 (38%), Positives = 28/50 (56%) Frame = +1 Query: 319 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQI 468 P + + R EV + R AML +GCV+PELL G VWF+ +++ Sbjct: 1 PTVYERMRVAEVFNGRLAMLAIVGCVYPELL-------GNGVWFEVWNKV 43
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 60.1 bits (144), Expect = 4e-09 Identities = 28/71 (39%), Positives = 40/71 (56%) Frame = +1 Query: 253 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 432 P YLTG GD G+D GL+ DPE + E+++ RWAMLG G + PE+ + G+ Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI-I 122 Query: 433 GEAVWFKAGSQ 465 W+ AG + Sbjct: 123 NVPEWYDAGKE 133
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 58.9 bits (141), Expect = 8e-09 Identities = 43/124 (34%), Positives = 56/124 (45%), Gaps = 6/124 (4%) Frame = +1 Query: 109 KNMALSALFGEARV------TMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTG 270 K + S LF ++V T RK A A W A + G + P +L G Sbjct: 23 KKSSQSLLFVNSKVGAGVSTTSRKLVVVAAAAAPKKSWIPAVK----GGGNFLDPEWLDG 78 Query: 271 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 450 PGD+G+D GL DP RE E+IH RWAML LG + A G+ WF Sbjct: 79 SLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVGQ--AWTGIP-----WF 131 Query: 451 KAGS 462 +AG+ Sbjct: 132 EAGA 135
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 57.4 bits (137), Expect = 2e-08 Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 8/109 (7%) Frame = +1 Query: 157 RKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPET--- 327 RK + + ++ GA+R L+ S + SYL G PGD+G+D GLS DPE Sbjct: 33 RKASFVVRAASTPPVKQGANRQLWFA--SKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGG 89 Query: 328 FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEA--VWFKAG 459 F + + L EVI+ R+AMLGA G + PE+L + G+ E WF+ G Sbjct: 90 FIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTG 138
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 57.0 bits (136), Expect = 3e-08 Identities = 41/114 (35%), Positives = 50/114 (43%) Frame = +1 Query: 121 LSALFGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 300 L+A G A R T A A+ W A R G + P +L G PGDYG+D Sbjct: 31 LAARVGGAATPKRFTVLAA---AAKKSWIPAVR----GGGNLVDPEWLDGSLPGDYGFDP 83 Query: 301 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 462 GL DP RE E+IH RWAM LG G + WF+AG+ Sbjct: 84 LGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV-------GQAWSGIPWFEAGA 130
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 56.6 bits (135), Expect = 4e-08 Identities = 44/119 (36%), Positives = 51/119 (42%), Gaps = 1/119 (0%) Frame = +1 Query: 109 KNMALSALFGEARVTMRKT-AAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGD 285 K AL ARVT K A VA W A V G L P +L G PGD Sbjct: 23 KTQALLGAHVTARVTTPKRFVVAAAAVAPKKSWIPA--VKSGGNLVD--PEWLDGSLPGD 78 Query: 286 YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 462 +G+D GL DP RE E+IH RWAM LG G + WF+AG+ Sbjct: 79 FGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV-------GQAWSGIPWFEAGA 130
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 43.5 bits (101), Expect = 4e-04 Identities = 47/162 (29%), Positives = 55/162 (33%), Gaps = 44/162 (27%) Frame = +1 Query: 151 TMRKTAAKAKQVASSSP-WYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE- 324 T + + KAK V S P W+ + P YL G GDYG+D GL E Sbjct: 37 TKKASPKKAKTVISDRPLWFPG----------AKSPEYLDGSLVGDYGFDPFGLGKPAEY 86 Query: 325 ----------TFAKN--------------------------------RELEVIHCRWAML 378 AKN RE E+IH RWAML Sbjct: 87 LQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAML 146 Query: 379 GALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 504 LG + E L GV W AG +G YLG P Sbjct: 147 ATLGAITVEWL--TGV-----TWQDAGKVELVDGS-SYLGQP 180 Score = 33.5 bits (75), Expect = 0.36 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +1 Query: 220 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 390 VL +G + + + L E +PG +D GL++DP A+ + E+ H R AM+G LG Sbjct: 193 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLG 252
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 41.2 bits (95), Expect = 0.002 Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Frame = +1 Query: 97 GKAVK-NMALSALFGEARVTMRKTAAKAKQVASSSPW 204 GKAVK + + S + G R+TMRKTAAK K +S SPW Sbjct: 15 GKAVKLSPSSSEISGNGRITMRKTAAKPKPASSGSPW 51
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 41.2 bits (95), Expect = 0.002 Identities = 48/167 (28%), Positives = 60/167 (35%), Gaps = 43/167 (25%) Frame = +1 Query: 133 FGEARVTMRKTAAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 312 FG+ + +K+A K V + P + Y G +S P +L G GDYG+D GL Sbjct: 36 FGKKKAAPKKSAKKT--VTTDRPLW------YPGAIS---PDWLDGSLVGDYGFDPFGLG 84 Query: 313 ADPE-----------TFAKN--------------------------------RELEVIHC 363 E AKN RE E+IH Sbjct: 85 KPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHG 144 Query: 364 RWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 504 RWAML LG + E L GV W AG +G YLG P Sbjct: 145 RWAMLATLGALSVEWL--TGV-----TWQDAGKVELVDGS-SYLGQP 183 Score = 35.4 bits (80), Expect = 0.096 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +1 Query: 220 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 390 VL +G + + + L E +PG +D GL+ADPE A+ + E+ H R AM+ LG Sbjct: 196 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLG 255
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 40.4 bits (93), Expect = 0.003 Identities = 39/128 (30%), Positives = 44/128 (34%), Gaps = 43/128 (33%) Frame = +1 Query: 250 PPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN------------------- 339 PP +L G GD G+D GL E AKN Sbjct: 65 PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124 Query: 340 -------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 480 RE E+IH RWAMLG LG + E L G+ W AG EG Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEAL--TGI-----AWQDAGKVELVEG 177 Query: 481 GLDYLGNP 504 YLG P Sbjct: 178 S-SYLGQP 184 Score = 30.8 bits (68), Expect = 2.4 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Frame = +1 Query: 220 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 387 VL +G + + S L E +PG Y +D GL+ADPE + E+ H R AM+ L Sbjct: 197 VLVVGYIEFQRNSELDPEKRIYPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFL 254
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 39.7 bits (91), Expect = 0.005 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%) Frame = +1 Query: 229 LGPLSGEPPSYLT-GEFPGDYGWDTAGLS-ADPETFAKNRELEVIHCRWAMLGALGCVFP 402 + P +G+ S L G PGD G+D GL+ +DP+ F +E E+ H R AM+ A G + Sbjct: 132 VNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQ 191 Query: 403 ELLARN--GVKFGEAVW 447 E ++ + G +G+A + Sbjct: 192 EAVSGDTWGTYWGDATF 208
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 38.5 bits (88), Expect = 0.011 Identities = 20/37 (54%), Positives = 24/37 (64%), Gaps = 1/37 (2%) Frame = +1 Query: 97 GKAVKNMALSA-LFGEARVTMRKTAAKAKQVASSSPW 204 GK VK S+ + G R+TMRKTAAK K +S SPW Sbjct: 15 GKTVKLAPSSSEITGNGRITMRKTAAKPKPASSGSPW 51
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 37.0 bits (84), Expect = 0.033 Identities = 47/154 (30%), Positives = 56/154 (36%), Gaps = 53/154 (34%) Frame = +1 Query: 139 EARVTMRKTAAKA--KQVASSSPWY--GADRVLYLGPLSGEP----PSYLTGEFPGDYGW 294 +A T K A KA K+VA+S+ G Y G P P +L G PGD G+ Sbjct: 13 KAGTTATKPAPKATTKKVATSTGTRSGGVGYRKYQGDALWLPNTTRPEWLDGSLPGDRGF 72 Query: 295 DTAGLSADPE-----------TFAKN---------------------------------- 339 D GLS E AKN Sbjct: 73 DPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSENRLAPYSEVFGLARF 132 Query: 340 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 441 RE E+IH RWAML LG + E A GV + EA Sbjct: 133 RECELIHGRWAMLACLGALVAE--ATTGVSWVEA 164
>VL2_HPV41 (P27558) Minor capsid protein L2| Length = 554 Score = 33.5 bits (75), Expect = 0.36 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Frame = -1 Query: 507 AGVAEIVKAAFAEDL---GAGLEPNSLTKLDAIAGEQLGEDTTKRTKHSPSTVDHLQLTV 337 +GV A F +D+ G +EP +LD + GEQ GE T R +PS + LT Sbjct: 366 SGVQVGSAAHFFQDISPIGQAIEPIDAIELDVL-GEQSGEGTIVRGDPTPSIEQDIGLTA 424 Query: 336 LGEGL 322 LG+ + Sbjct: 425 LGDNI 429
>GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 373 Score = 33.1 bits (74), Expect = 0.48 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 1/78 (1%) Frame = +1 Query: 136 GEARVTMRKTAAKAKQVASSS-PWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 312 G A +R T + + S+ PW+G ++ L G P + + FPG G G+ Sbjct: 107 GPAETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVG 166 Query: 313 ADPETFAKNRELEVIHCR 366 AD A R++ H R Sbjct: 167 ADR---AYGRDIVEAHYR 181
>GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 32.3 bits (72), Expect = 0.81 Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 11/99 (11%) Frame = +1 Query: 184 VASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH- 360 V+S PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 123 VSSQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179 Query: 361 --CRWAMLGALGC---VFP-----ELLARNGVKFGEAVW 447 C +A + G V P ++ G++ G+ +W Sbjct: 180 RACLYAGIKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 32.0 bits (71), Expect = 1.1 Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%) Frame = +1 Query: 97 GKAVK-NMALSALFGEARVTMRKTAAKAKQVASSSPW 204 G+AVK + + S + G R+TMRK A AK SSSPW Sbjct: 15 GQAVKLSPSASEISGNGRITMRK--AVAKSAPSSSPW 49
>HMEN_DROVI (P09145) Segmentation polarity homeobox protein engrailed| Length = 584 Score = 32.0 bits (71), Expect = 1.1 Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 14/100 (14%) Frame = -2 Query: 503 GLPR*SRPPSLKIWEPALNQTASPNL-------------TPLRASNSGKTQ-PSAPSIAH 366 G P PP+ K+ EP++ ++A +L TP+ +S +Q S P ++ Sbjct: 311 GNPNAVLPPTAKLTEPSVEKSALGSLCKTVSQIGQAQSTTPVTTPSSRPSQLASPPPASN 370 Query: 365 RQWITSSSRFLAKVSGSAESPAVSHP*SPGNSPVK*LGGS 246 I+SSS A S S+ S S S +SP L G+ Sbjct: 371 ASTISSSSSTAASCSASSSSGCSSAASSLNSSPSSRLAGA 410
>GLN11_ORYSA (P14656) Glutamine synthetase cytosolic isozyme 1-1 (EC 6.3.1.2)| (OsGLN1;1) (OsGS1;1) (Glutamate--ammonia ligase GLN1;1) (Glutamine synthetase shoot isozyme) Length = 356 Score = 32.0 bits (71), Expect = 1.1 Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 4/109 (3%) Frame = +1 Query: 157 RKTAAK---AKQVASSSPWYGADR-VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 324 R AAK + +VAS PWYG ++ L P + G FPG G G+ AD Sbjct: 107 RHNAAKIFSSPEVASEEPWYGIEQEYTLLQKDINWPLGWPVGGFPGPQGPYYCGIGADKS 166 Query: 325 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIF 471 + C +A + G + + + G +V AG Q++ Sbjct: 167 FGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDQVW 215
>SYNJ2_RAT (O55207) Synaptojanin-2 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 2) Length = 1496 Score = 31.6 bits (70), Expect = 1.4 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%) Frame = -2 Query: 452 LNQTASPNLTPLRASNSGKTQPSAPSIAHRQWITSSSRFLAKVSGSAESPAVSHP*SPGN 273 L+ +P L + + SAP+ H Q + S+S+ L ++ S+ SP+ P +P Sbjct: 1325 LSSPEAPEAPSLAPKVPPRRKKSAPAAFHLQVLQSNSQLLQGLTCSSSSPSPPKPDTPLL 1384 Query: 272 SPVK*LGG----SPDS-GPR*S-TRSAPYHG 198 P LG SP++ GPR + +A +HG Sbjct: 1385 YPQMALGTSSAISPETDGPRVTEPEAASFHG 1415
>GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.6 bits (70), Expect = 1.4 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = +1 Query: 142 ARVTMRKTAAKAKQVASSS-PWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 318 A +R T + + S+ PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 319 PETFAKNRELEVIHCR 366 A R++ H R Sbjct: 168 K---AYGRDIVEAHYR 180
>GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.6 bits (70), Expect = 1.4 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = +1 Query: 142 ARVTMRKTAAKAKQVASSS-PWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 318 A +R T + + S+ PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLLGTDGHPFGWPSDGFPGPQGLYYCGVGAD 167 Query: 319 PETFAKNRELEVIHCR 366 A R++ H R Sbjct: 168 K---AYRRDIMEAHYR 180
>GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.6 bits (70), Expect = 1.4 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = +1 Query: 142 ARVTMRKTAAKAKQVASSS-PWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 318 A +R T + + S+ PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 319 PETFAKNRELEVIHCR 366 A R++ H R Sbjct: 168 K---AYGRDIVEAHYR 180
>GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) Length = 392 Score = 31.6 bits (70), Expect = 1.4 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = +1 Query: 142 ARVTMRKTAAKAKQVASS-SPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 318 A +R T K ++ + PW+G ++ L ++G P + FPG G G+ AD Sbjct: 109 AETNLRHTCKKIMEMVNDHRPWFGMEQEYTLLGINGHPYGWPENGFPGPQGPYYCGVGAD 168
>TIR1_YEAST (P10863) Cold shock-induced protein TIR1 precursor (Serine-rich| protein 1) Length = 254 Score = 31.2 bits (69), Expect = 1.8 Identities = 26/108 (24%), Positives = 43/108 (39%) Frame = -2 Query: 458 PALNQTASPNLTPLRASNSGKTQPSAPSIAHRQWITSSSRFLAKVSGSAESPAVSHP*SP 279 P + P L L S PS+ + SSS + S+ S A S +P Sbjct: 96 PWYSSRLEPALKSLNGDASSSAAPSSSAAPTSSAAPSSSAAPTSSAASSSSEAKSSSAAP 155 Query: 278 GNSPVK*LGGSPDSGPR*STRSAPYHGLLEATCFAFAAVFRIVTRASP 135 +S K +P S S+ +AP +++ A ++ +T A+P Sbjct: 156 SSSEAKSSSAAPSSSEAKSSSAAPSSSEAKSSSAAPSSTEAKITSAAP 203
>GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.2 bits (69), Expect = 1.8 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = +1 Query: 142 ARVTMRKTAAKAKQVASSS-PWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 318 A +R T + + S+ PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 319 PETFAKNRELEVIHCR 366 A R++ H R Sbjct: 168 R---AYGRDIVEAHYR 180
>BSND_MOUSE (Q8VIM4) Barttin| Length = 307 Score = 31.2 bits (69), Expect = 1.8 Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 4/103 (3%) Frame = -2 Query: 485 RPPSLKIWEPALNQTASPNLTPLRASNSGKTQPSAPSIAHRQWITSSSRFLAK---VSGS 315 +PP +++WE A + P+ T ++ G ++ P +A +SS + Sbjct: 92 QPPYVRLWEEAAYDQSLPDFTHIQMKVMGYSEDPRPLLAPELKTGASSVREGEPRTAQAW 151 Query: 314 AESPAVSHP*SPGNSPVK*LG-GSPDSGPR*STRSAPYHGLLE 189 E+P V H S N K SP GP+ S A +H L+ Sbjct: 152 MEAPVVVHRGSDENEGEKSHSQSSPSVGPQGSAPLASFHDDLD 194
>GLNA_HEBCY (Q96UV5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 354 Score = 31.2 bits (69), Expect = 1.8 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Frame = +1 Query: 145 RVTMRKTAAKA-KQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYG 291 R R AAK +Q PW+G ++ L G P + G FPG G Sbjct: 105 RTNFRHHAAKVMEQAKEDVPWFGLEQEYTLFDADGSPYGWPKGGFPGPQG 154
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 31.2 bits (69), Expect = 1.8 Identities = 13/13 (100%), Positives = 13/13 (100%) Frame = +1 Query: 484 LDYLGNPSLVHAQ 522 LDYLGNPSLVHAQ Sbjct: 1 LDYLGNPSLVHAQ 13
>GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 30.8 bits (68), Expect = 2.4 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 11/99 (11%) Frame = +1 Query: 184 VASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH- 360 V++ PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 123 VSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179 Query: 361 --CRWA---MLGALGCVFP-----ELLARNGVKFGEAVW 447 C +A + G V P ++ G++ G+ +W Sbjct: 180 RACLYAGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
>GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 30.8 bits (68), Expect = 2.4 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 11/99 (11%) Frame = +1 Query: 184 VASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH- 360 V++ PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 123 VSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179 Query: 361 --CRWA---MLGALGCVFP-----ELLARNGVKFGEAVW 447 C +A + G V P ++ G++ G+ +W Sbjct: 180 RACLYAGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
>YBK4_YEAST (P38164) WD-repeat protein YBL104C| Length = 1038 Score = 30.4 bits (67), Expect = 3.1 Identities = 15/73 (20%), Positives = 35/73 (47%) Frame = -2 Query: 506 LGLPR*SRPPSLKIWEPALNQTASPNLTPLRASNSGKTQPSAPSIAHRQWITSSSRFLAK 327 +GL R SL+IW+ + + + P+ + + ++ S + + +S++FL + Sbjct: 165 MGLDRNKHDSSLQIWDMNYHDDSHETINPMFSYCTNESIVSLKFLNDTSVLAASTKFLKE 224 Query: 326 VSGSAESPAVSHP 288 + + +P HP Sbjct: 225 IDVRSPNPIYQHP 237
>GLNA3_MEDSA (Q43785) Glutamine synthetase, nodule isozyme (EC 6.3.1.2)| (Glutamate--ammonia ligase) Length = 356 Score = 30.4 bits (67), Expect = 3.1 Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 7/113 (6%) Frame = +1 Query: 157 RKTAAKA---KQVASSSPWYGADR-VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 324 R AAK VA+ PWYG ++ L + P + G FPG G G+ AD Sbjct: 107 RHNAAKIFSHPDVAAEVPWYGIEQEYTLLQKDTNWPLGWPIGGFPGPQGPYYCGIGADK- 165 Query: 325 TFAKNRELEVIH---CRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFS 474 A R++ H C +A + G + + + G +V AG +I++ Sbjct: 166 --AYGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDEIWA 216
>GLNA_SQUAC (P41320) Glutamine synthetase, mitochondrial precursor (EC 6.3.1.2)| (Glutamate--ammonia ligase) Length = 403 Score = 30.4 bits (67), Expect = 3.1 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 11/99 (11%) Frame = +1 Query: 184 VASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH- 360 +A+ PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 153 IANEYPWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGADK---AYGRDIVEAHY 209 Query: 361 --CRWAMLGALGCVFPELLAR--------NGVKFGEAVW 447 C +A + G + A+ G++ G+ +W Sbjct: 210 RACLYAGIELSGTNAEVMAAQWEYQVGPCEGIQMGDHLW 248
>HFLK_VIBPA (P40605) Protein hflK| Length = 400 Score = 30.0 bits (66), Expect = 4.0 Identities = 14/29 (48%), Positives = 20/29 (68%) Frame = -1 Query: 429 LDAIAGEQLGEDTTKRTKHSPSTVDHLQL 343 +D +AG++ G+ TKR S ST DH+QL Sbjct: 349 IDKLAGQE-GQTDTKRKSKSSSTYDHIQL 376
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 30.0 bits (66), Expect = 4.0 Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = +1 Query: 97 GKAVK-NMALSALFGEARVTMRKTAAKAKQVASSSPW 204 G+AVK + + S G R+TMRK A AK SSSPW Sbjct: 15 GQAVKLSPSASENSGNGRITMRK--AVAKSAPSSSPW 49
>TRSF_DROSI (Q24669) Female-specific protein transformer| Length = 184 Score = 30.0 bits (66), Expect = 4.0 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = -3 Query: 316 QLRARQYPTHSHQGTRRSSSSVAHLIADRGRAHDQHR 206 Q R R +HQ TRR+ S +DRG H +HR Sbjct: 54 QDRIRSLRQRAHQSTRRTRSRSRSQSSDRGSRHRRHR 90
>GLNA_AMAMU (Q8X169) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 354 Score = 30.0 bits (66), Expect = 4.0 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Frame = +1 Query: 145 RVTMRKTAAKAKQVASSS-PWYGADRVLYLGPLSGEPPSYLTGEFPGDYG 291 R R AK ++A PW+G ++ L G P + G FPG G Sbjct: 105 RTNHRHHTAKVMELAKDEIPWFGIEQEYTLFDADGSPYGWPKGGFPGPQG 154
>STAG2_MOUSE (O35638) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)| Length = 1231 Score = 29.6 bits (65), Expect = 5.3 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 5/63 (7%) Frame = +1 Query: 322 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG-----GL 486 ET +K R+++ I C ++ +L +F E++ NG F + +G + F+ GL Sbjct: 902 ETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKEFARRFALTFGL 961 Query: 487 DYL 495 D L Sbjct: 962 DQL 964
>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast| precursor Length = 270 Score = 29.6 bits (65), Expect = 5.3 Identities = 33/92 (35%), Positives = 41/92 (44%), Gaps = 4/92 (4%) Frame = +1 Query: 148 VTMRKTAAKAKQVASSSPWYG--ADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADP 321 V+ KT + K V S+S A+ YL L G +G F G WD L+A Sbjct: 28 VSGSKTVSGGKTVGSASAESRRVAEVQAYLATLPG--CGVESGPFKGV--WDPLSLAATA 83 Query: 322 ET--FAKNRELEVIHCRWAMLGALGCVFPELL 411 + RE E+ H R AML ALG V E L Sbjct: 84 TVGDVRRWRESEITHGRVAMLAALGFVVGEQL 115
>GLNA1_DROME (P20477) Glutamine synthetase 1, mitochondrial precursor (EC| 6.3.1.2) (Glutamate--ammonia ligase 1) Length = 399 Score = 29.6 bits (65), Expect = 5.3 Identities = 17/69 (24%), Positives = 28/69 (40%) Frame = +1 Query: 184 VASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 363 ++ PW+G ++ L + G P + FP G G+ AD E V+ C Sbjct: 161 ISDQEPWFGIEQEYTLLDVDGRPFGWPENGFPAPQGPYYCGVGADRVYARDLVEAHVVAC 220 Query: 364 RWAMLGALG 390 +A + G Sbjct: 221 LYAGIDFAG 229
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 29.6 bits (65), Expect = 5.3 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = -2 Query: 482 PPSLKIWEPALNQTASPNLTPLRASNSGKTQPSAPSIA 369 PP+ P T+SP+ T ++S++ T SAPS A Sbjct: 57 PPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTA 94
>GLNA_CHICK (P16580) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 373 Score = 29.6 bits (65), Expect = 5.3 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = +1 Query: 142 ARVTMRKTAAKAKQVASSS-PWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 318 A +R T + + S+ PW+G ++ L G P + + FPG G G+ AD Sbjct: 109 ADTNLRHTCRRIMDMVSNQHPWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGAD 168 Query: 319 PETFAKNRELEVIHCR 366 A R++ H R Sbjct: 169 K---AYGRDIVEAHYR 181
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 29.6 bits (65), Expect = 5.3 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = -2 Query: 482 PPSLKIWEPALNQTASPNLTPLRASNSGKTQPSAPSIA 369 PP+ P T+SP+ T ++S++ T SAPS A Sbjct: 57 PPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTA 94
>STAG2_HUMAN (Q8N3U4) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)| Length = 1231 Score = 29.3 bits (64), Expect = 6.9 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +1 Query: 322 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 432 ET +K R+++ I C ++ +L +F E++ NG F Sbjct: 902 ETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNF 938
>TENS1_BOVIN (Q9GLM4) Tensin-1| Length = 1715 Score = 29.3 bits (64), Expect = 6.9 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 6/65 (9%) Frame = -2 Query: 455 ALNQTASPNLTPL-----RASNSGKTQPSAPSIAHRQWI-TSSSRFLAKVSGSAESPAVS 294 A ++T N P RA N PS+PS++HRQ + + F S +S A + Sbjct: 1161 ARHRTVGTNTPPSPGFGRRAVNPSLAAPSSPSLSHRQVMGPLGTGFHGNTGSSPQSSAAT 1220 Query: 293 HP*SP 279 P SP Sbjct: 1221 TPGSP 1225
>MUC1_MOUSE (Q02496) Mucin-1 precursor (Polymorphic epithelial mucin) (PEMT)| (Episialin) Length = 630 Score = 29.3 bits (64), Expect = 6.9 Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 1/87 (1%) Frame = -2 Query: 455 ALNQTASPNLTPLRASNSGKTQPSAPSIAHRQWITSSSRFLAKVSGSAESPAVSHP*SPG 276 A T+SP +PL+ SNS S S A S+ V G SPA S P Sbjct: 109 AHGDTSSPATSPLKDSNSSPVVHSGTSSAATTAPVDSTS-SPVVHGGTSSPATSPPGDST 167 Query: 275 NSPVK*LGGSPDS-GPR*STRSAPYHG 198 +SP SP + P ST +A G Sbjct: 168 SSPDHSSTSSPATRAPEDSTSTAVLSG 194
>FA53C_PONPY (Q5R815) Protein FAM53C| Length = 392 Score = 29.3 bits (64), Expect = 6.9 Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 2/72 (2%) Frame = -2 Query: 488 SRPPSLKIWEPALNQTASPNLTPLRASNSGKTQPSAPSIAHRQ--WITSSSRFLAKVSGS 315 S P L W+P S TP++ SG P + H+ SS RFL S S Sbjct: 122 SVPVDLSRWQPVWRPAPSKLWTPIKHRGSG--GGGGPQVPHQSPPKRVSSLRFLQAPSAS 179 Query: 314 AESPAVSHP*SP 279 ++ P SP Sbjct: 180 SQCAPAHRPYSP 191
>FA53C_HUMAN (Q9NYF3) Protein FAM53C| Length = 392 Score = 29.3 bits (64), Expect = 6.9 Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 2/72 (2%) Frame = -2 Query: 488 SRPPSLKIWEPALNQTASPNLTPLRASNSGKTQPSAPSIAHRQ--WITSSSRFLAKVSGS 315 S P L W+P S TP++ SG P + H+ SS RFL S S Sbjct: 122 SVPVDLSRWQPVWRPAPSKLWTPIKHRGSG--GGGGPQVPHQSPPKRVSSLRFLQAPSAS 179 Query: 314 AESPAVSHP*SP 279 ++ P SP Sbjct: 180 SQCAPAHRPYSP 191
>GLNA4_MAIZE (P38562) Glutamine synthetase root isozyme 4 (EC 6.3.1.2)| (Glutamate--ammonia ligase) (GS107) Length = 355 Score = 29.3 bits (64), Expect = 6.9 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 4/109 (3%) Frame = +1 Query: 157 RKTAAK---AKQVASSSPWYGADR-VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 324 R +AAK + +VA+ PWYG ++ L + P + G FPG G G+ A+ Sbjct: 107 RYSAAKIFSSPEVAAEEPWYGIEQEYTLLQKDTNWPLGWPIGGFPGPQGPYYCGIGAEKS 166 Query: 325 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIF 471 + C +A + G + + + G +V +G Q++ Sbjct: 167 FGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISSGDQVW 215
>GLNA2_DROME (P20478) Glutamine synthetase 2, cytoplasmic (EC 6.3.1.2)| (Glutamate--ammonia ligase 2) Length = 369 Score = 28.9 bits (63), Expect = 9.0 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = +1 Query: 157 RKTAAK-AKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 318 RKT + A + A+ PW+G ++ G P + FPG G G+ A+ Sbjct: 120 RKTCLEVANKCAAEEPWFGIEQEYTFLDFDGHPLGWPKNGFPGPQGPYYCGVGAN 174
>BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted)| Length = 1206 Score = 28.9 bits (63), Expect = 9.0 Identities = 22/85 (25%), Positives = 43/85 (50%) Frame = -2 Query: 455 ALNQTASPNLTPLRASNSGKTQPSAPSIAHRQWITSSSRFLAKVSGSAESPAVSHP*SPG 276 +L + S +L P +S+SG + S P +Q ++S++ S S+ + + + SP Sbjct: 224 SLATSTSTSLAPKSSSSSGGSN-STPQQQQQQLVSSNN------SSSSSNNSFTKASSPN 276 Query: 275 NSPVK*LGGSPDSGPR*STRSAPYH 201 N+ + +GG+ S +T +A H Sbjct: 277 NNGARSVGGAATSAATGTTAAAGSH 301
>TPP1_CANFA (Q9XSB8) Tripeptidyl-peptidase 1 precursor (EC 3.4.14.9)| (Tripeptidyl-peptidase I) (TPP-I) (Tripeptidyl aminopeptidase) (Lysosomal pepstatin insensitive protease) (LPIC) Length = 563 Score = 28.9 bits (63), Expect = 9.0 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Frame = -2 Query: 443 TASPNLTPLRASN-SGKTQPSAPSIAHRQWITSSSRFLAKVSGSAESPAV 297 ++SP+L P N SG+ P +++ W+ S+S + VSG++ S V Sbjct: 431 SSSPHLPPSSYFNASGRAYPDVAALSDGYWVVSNSVPIPWVSGTSASTPV 480
>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2| Length = 326 Score = 28.9 bits (63), Expect = 9.0 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 3/71 (4%) Frame = -3 Query: 412 RATRGRHNQAHQA*PIDSGSPPAHGSW--RRSQGQLRAR-QYPTHSHQGTRRSSSSVAHL 242 RA + H ++ ++ SGSP S+ R + +AR + P H H+ R + Sbjct: 211 RAQKSEHRESKKS---HSGSPDGRSSYHARAEDPECKARKEKPKHEHKSASRREAEEKSR 267 Query: 241 IADRGRAHDQH 209 +RGR+ H Sbjct: 268 ERERGRSSGTH 278
>GLNA3_MAIZE (P38561) Glutamine synthetase root isozyme 3 (EC 6.3.1.2)| (Glutamate--ammonia ligase) (GS112) Length = 356 Score = 28.9 bits (63), Expect = 9.0 Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 4/109 (3%) Frame = +1 Query: 157 RKTAAK---AKQVASSSPWYGADR-VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 324 R AAK + +VA+ PWYG ++ L + P + G FPG G G+ A+ Sbjct: 107 RYNAAKIFSSPEVAAEEPWYGIEQEYTLLQKDTNWPLGWPIGGFPGPQGPYYCGIGAEKS 166 Query: 325 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIF 471 + C +A + G + + + G +V +G Q++ Sbjct: 167 FGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISSGDQVW 215
>GLN13_ARATH (Q9LVI8) Glutamine synthetase cytosolic isozyme 1-3 (EC 6.3.1.2)| (GLN1;3) (Glutamate--ammonia ligase GLN1;3) (GS1) Length = 354 Score = 28.9 bits (63), Expect = 9.0 Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 15/112 (13%) Frame = +1 Query: 157 RKTAAKA---KQVASSSPWYGADRVLYLGPLS-GEPPSYLTGEFPGDYGWDTAGLSADPE 324 R AAK VA PWYG ++ L P + G +PG G G+ AD Sbjct: 107 RHNAAKIFSHPDVAKEEPWYGIEQEYTLMQKDVNWPIGWPVGGYPGPQGPYYCGVGADK- 165 Query: 325 TFAKNRELEVIH---CRWAMLGALGC---VFP-----ELLARNGVKFGEAVW 447 A R++ H C +A +G G V P ++ G+ G+ VW Sbjct: 166 --AIGRDIVDAHYKACLYAGIGISGINGEVMPGQWEFQVGPVEGISSGDQVW 215 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,865,069 Number of Sequences: 219361 Number of extensions: 1617392 Number of successful extensions: 5799 Number of sequences better than 10.0: 119 Number of HSP's better than 10.0 without gapping: 5575 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5766 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3985467738 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
