ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26n23 |
|---|---|
| Clone Library Name | barley_pub |
>ICTA_SYNY3 (P27372) Inorganic carbon transport protein| Length = 80 Score = 43.9 bits (102), Expect = 3e-04 Identities = 16/53 (30%), Positives = 32/53 (60%) Frame = +1 Query: 355 IAFFYLFVAPPIIMNWMRLRWFKRKFIETYLQFMFTYLFFPGLMLWAPFVNFR 513 ++ YL V P ++ +++ RW+ +E + + +LFFPGL++ +P +N R Sbjct: 22 LSLAYLLVFPALLYWYLQKRWYVASSVERLVMYFLVFLFFPGLLVLSPVLNLR 74
>LBD18_ARATH (O22131) LOB domain protein 18| Length = 262 Score = 37.4 bits (85), Expect = 0.025 Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 10/87 (11%) Frame = +3 Query: 273 GASPGCSGDGERGGGHRHPGDPAAGGRDRLLLPLRCSPD-----YHELDEAEVVQAQVHR 437 G GC G G GGG G L +C P Y + ++ A VH+ Sbjct: 13 GGGGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHK 72 Query: 438 -----DVSAVHVHVPLLPRFDALGTVC 503 +VS + +H+P+ R DA+ T+C Sbjct: 73 VFGASNVSKLLLHIPVHRRSDAVVTIC 99
>WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1| Length = 574 Score = 37.0 bits (84), Expect = 0.033 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 3/84 (3%) Frame = +2 Query: 23 PPKASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSR---RSPSPGSSAVSM 193 PP+++A PP G S+P P P S P R+ P L +SR P+P + Sbjct: 342 PPRSNAAGSIPLPPQGRSAPPPP---PPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGR 398 Query: 194 TSLSLPPRARSCRSWPPCCSAAPS 265 ++ +LPP + R+ P PS Sbjct: 399 SAPALPPLGNASRTSTPPVPTPPS 422
>YHL1_EBV (P03181) Hypothetical protein BHLF1| Length = 660 Score = 35.0 bits (79), Expect = 0.12 Identities = 25/87 (28%), Positives = 35/87 (40%) Frame = +2 Query: 29 KASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTSLSL 208 + S + PP PS P GGR APG + +P PG A + + Sbjct: 536 RRSGAQRGHPPPGAGQRPSGPT--------GGRPAAPGAPGTPAAPGPGGGAAVPSGATP 587 Query: 209 PPRARSCRSWPPCCSAAPSGQRCKPRL 289 P S + PP + P +R +PRL Sbjct: 588 HPERGSGPADPPAAARLPP-ERQEPRL 613 Score = 35.0 bits (79), Expect = 0.12 Identities = 25/87 (28%), Positives = 35/87 (40%) Frame = +2 Query: 29 KASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTSLSL 208 + S + PP PS P GGR APG + +P PG A + + Sbjct: 411 RRSGAQRGHPPPGAGQRPSGPT--------GGRPAAPGAPGTPAAPGPGGGAAVPSGATP 462 Query: 209 PPRARSCRSWPPCCSAAPSGQRCKPRL 289 P S + PP + P +R +PRL Sbjct: 463 HPERGSGPADPPAAARLPP-ERQEPRL 488 Score = 35.0 bits (79), Expect = 0.12 Identities = 25/87 (28%), Positives = 35/87 (40%) Frame = +2 Query: 29 KASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTSLSL 208 + S + PP PS P GGR APG + +P PG A + + Sbjct: 286 RRSGAQRGHPPPGAGQRPSGPT--------GGRPAAPGAPGTPAAPGPGGGAAVPSGATP 337 Query: 209 PPRARSCRSWPPCCSAAPSGQRCKPRL 289 P S + PP + P +R +PRL Sbjct: 338 HPERGSGPADPPAAARLPP-ERQEPRL 363 Score = 35.0 bits (79), Expect = 0.12 Identities = 25/87 (28%), Positives = 35/87 (40%) Frame = +2 Query: 29 KASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTSLSL 208 + S + PP PS P GGR APG + +P PG A + + Sbjct: 161 RRSGAQRGHPPPGAGQRPSGPT--------GGRPAAPGAPGTPAAPGPGGGAAVPSGATP 212 Query: 209 PPRARSCRSWPPCCSAAPSGQRCKPRL 289 P S + PP + P +R +PRL Sbjct: 213 HPERGSGPADPPAAARLPP-ERQEPRL 238
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 34.3 bits (77), Expect = 0.21 Identities = 34/115 (29%), Positives = 40/115 (34%) Frame = +3 Query: 6 GATAXCRPKPLPAINGDHRLMALPPRRVLAATRSAPSQAAGVVPLVSSTAGDLQVQDPLP 185 G A RP P G P R A SAP A + V+ P P Sbjct: 64 GPAASARPGAKPTPGGPR-----PGPRTPAPAASAPQAPAEQTARPTDARPGPAVK-PGP 117 Query: 186 SP*QAFPYRPELAAAEAGLRVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGG 350 +P A P PE AA+A +R G PG + PG PA GG Sbjct: 118 APTPARPAAPEAPAAKAAPEAPAQRPTPGGPRPGQQ--------QQRPGAPAQGG 164
>TWST1_GORGO (Q8MI06) Twist-related protein 1| Length = 203 Score = 34.3 bits (77), Expect = 0.21 Identities = 18/39 (46%), Positives = 21/39 (53%) Frame = +3 Query: 243 RVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGGRDR 359 R + RR G GA PG + G GGG PG PA G R + Sbjct: 39 RRSSRRSAGGGAGPGGAASGGAGGGD-EPGSPAQGKRGK 76
>ARHGF_HUMAN (O94989) Rho guanine nucleotide exchange factor 15 (Vsm-RhoGEF)| Length = 841 Score = 34.3 bits (77), Expect = 0.21 Identities = 35/114 (30%), Positives = 40/114 (35%), Gaps = 25/114 (21%) Frame = +2 Query: 23 PPKASACHQWRSPPHGASSPSR----------PRCHPL-CS*PGGRRRAPGL-------- 145 PP S Q PPH SSP P C P+ P + P L Sbjct: 24 PPSRSRAAQSPGPPHNGSSPQELPRNSNDAPTPMCTPIFWEPPAASLKPPALLPPSASRA 83 Query: 146 -FNSRRSP-----SPGSSAVSMTSLSLPPRARSCRSWPPCCSAAPSGQRCKPRL 289 +S+ SP +P S VS S S P RS P PSG C P L Sbjct: 84 SLDSQTSPDSPSSTPTPSPVSRRSASPEPAPRS-----PVPPPKPSGSPCTPLL 132
>TWST1_PONPY (Q8MIB9) Twist-related protein 1| Length = 203 Score = 33.9 bits (76), Expect = 0.28 Identities = 18/39 (46%), Positives = 21/39 (53%) Frame = +3 Query: 243 RVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGGRDR 359 R + RR G GA PG + G GGG PG PA G R + Sbjct: 40 RSSSRRSAGGGAGPGGAASGGVGGGD-EPGSPAQGKRGK 77
>HCN2_RAT (Q9JKA9) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 Length = 863 Score = 33.5 bits (75), Expect = 0.36 Identities = 30/86 (34%), Positives = 33/86 (38%), Gaps = 3/86 (3%) Frame = +2 Query: 14 GXLPPKASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSM 193 G LPP AS SPP SSP PR P PG G R S S +S Sbjct: 736 GPLPPAASPGPPAASPPAAPSSPRAPRTSPY-GVPGSPATRVGPALPARRLSRASRPLSA 794 Query: 194 TSLSLP---PRARSCRSWPPCCSAAP 262 + SLP P S P S+ P Sbjct: 795 SQPSLPHGAPAPSPAASARPASSSTP 820
>HCN2_MOUSE (O88703) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 (Brain cyclic nucleotide gated channel 2) (BCNG-2) (Hyperpolarization-activated cation channel 1) (HAC-1) Length = 863 Score = 33.5 bits (75), Expect = 0.36 Identities = 30/86 (34%), Positives = 33/86 (38%), Gaps = 3/86 (3%) Frame = +2 Query: 14 GXLPPKASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSM 193 G LPP AS SPP SSP PR P PG G R S S +S Sbjct: 736 GPLPPAASPGPPAASPPAAPSSPRAPRTSPY-GVPGSPATRVGPALPARRLSRASRPLSA 794 Query: 194 TSLSLP---PRARSCRSWPPCCSAAP 262 + SLP P S P S+ P Sbjct: 795 SQPSLPHGVPAPSPAASARPASSSTP 820
>TWST1_PANTR (Q8MI03) Twist-related protein 1| Length = 201 Score = 33.1 bits (74), Expect = 0.47 Identities = 18/39 (46%), Positives = 21/39 (53%) Frame = +3 Query: 243 RVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGGRDR 359 R + RR G GA PG + G GGG PG PA G R + Sbjct: 39 RRSSRRSAGGGAGPGGAAGGGVGGGD-EPGSPAQGKRGK 76
>TWST1_MACTO (Q7JGP2) Twist-related protein 1| Length = 201 Score = 33.1 bits (74), Expect = 0.47 Identities = 18/39 (46%), Positives = 21/39 (53%) Frame = +3 Query: 243 RVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGGRDR 359 R + RR G GA PG + G GGG PG PA G R + Sbjct: 39 RRSSRRSAGGGAGPGGAAGGGVGGGD-EPGSPAQGKRGK 76
>SOCS7_MOUSE (Q8VHQ2) Suppressor of cytokine signaling 7 (SOCS-7)| Length = 579 Score = 33.1 bits (74), Expect = 0.47 Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 1/96 (1%) Frame = +3 Query: 60 RLMALPPRRVLAATRSAPSQAAGVVPLVSSTAGDLQVQDPLPSP*QAFPYRPELAAAEAG 239 RL+ PP L P +VP + G+ Q Q P P P P RP + G Sbjct: 150 RLLLQPPGPELPPV---PFPLQDLVPPGRLSRGEQQQQQPPPPPPPPGPLRPLAGPSRKG 206 Query: 240 -LRVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAA 344 ++ + R + + G SG G+ G G R GD AA Sbjct: 207 SFKIRLSRLFRTKSCNGGSGGGD-GTGKRPSGDLAA 241
>TWST1_HYLCO (Q8MIE7) Twist-related protein 1| Length = 204 Score = 33.1 bits (74), Expect = 0.47 Identities = 18/39 (46%), Positives = 21/39 (53%) Frame = +3 Query: 243 RVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGGRDR 359 R + RR G GA PG + G GGG PG PA G R + Sbjct: 39 RRSSRRSAGGGAGPGGAAGGGVGGGD-EPGSPAQGKRGK 76
>TWST1_HUMAN (Q15672) Twist-related protein 1 (H-twist)| Length = 202 Score = 33.1 bits (74), Expect = 0.47 Identities = 18/39 (46%), Positives = 21/39 (53%) Frame = +3 Query: 243 RVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGGRDR 359 R + RR G GA PG + G GGG PG PA G R + Sbjct: 39 RRSSRRSAGGGAGPGGAAGGGVGGGD-EPGSPAQGKRGK 76
>TWST1_CALJA (Q8MIH1) Twist-related protein 1| Length = 203 Score = 33.1 bits (74), Expect = 0.47 Identities = 18/39 (46%), Positives = 21/39 (53%) Frame = +3 Query: 243 RVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGGRDR 359 R + RR G GA PG + G GGG PG PA G R + Sbjct: 39 RRSSRRSAGGGAGPGGAAGGGVGGGD-EPGSPAQGKRGK 76
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 32.7 bits (73), Expect = 0.61 Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 2/79 (2%) Frame = +2 Query: 53 RSPPHGASSPSRPRCHPLCS*PGGRRRAPG--LFNSRRSPSPGSSAVSMTSLSLPPRARS 226 R P ++SPS + S G RRR+P RRSPSP + + PPR R+ Sbjct: 522 RHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRT 581 Query: 227 CRSWPPCCSAAPSGQRCKP 283 PP +PS +R P Sbjct: 582 --PSPPPRRRSPSPRRYSP 598 Score = 29.3 bits (64), Expect = 6.8 Identities = 28/82 (34%), Positives = 30/82 (36%), Gaps = 9/82 (10%) Frame = +2 Query: 23 PPKASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLF---------NSRRSPSPG 175 PPK H PP SSP R P S + +P N R SPSP Sbjct: 630 PPKRRVSHS--PPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPR 687 Query: 176 SSAVSMTSLSLPPRARSCRSWP 241 A TS S PP R S P Sbjct: 688 PRA-PQTSSSPPPVRRGASSSP 708
>UL61_HCMVA (P16818) Hypothetical protein UL61| Length = 431 Score = 32.7 bits (73), Expect = 0.61 Identities = 38/125 (30%), Positives = 50/125 (40%), Gaps = 14/125 (11%) Frame = +3 Query: 24 RPKPLPAINGDHR----LMALPPRRVLAATRSAPSQAA------GVVPLVS-STAGDLQV 170 RP P P+ +R A P R+ A S+A G P+ T+ V Sbjct: 163 RPSPPPSTRPTYRRRRPTAATPSRKKKARRGPKASKAGREGELGGGSPVAHRGTSLGTGV 222 Query: 171 QDPLPSP*QAFPYRPELAAAEAGLRVAVRRHLGSGASPGCSGDGERGGGHRHP-GDPAA- 344 +DP P + P + AG + RR G+ PG ERGGG + P G P A Sbjct: 223 RDPAPRGGRGRARTPGPVHSAAGGPGSRRRSPGAARDPGPEPGEERGGGGKPPLGSPRAT 282 Query: 345 -GGRD 356 G RD Sbjct: 283 DGNRD 287
>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein| Length = 2480 Score = 32.3 bits (72), Expect = 0.80 Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 2/84 (2%) Frame = +2 Query: 26 PKASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTSLS 205 P + Q P GA P R C CS PG + ++R PSP +S + Sbjct: 802 PSSPLVLQVGRPEQGAVGPHRSHC---CSQPGTQPAQ----EAQRGPSPEASWLCGRYCP 854 Query: 206 LPPRARSC--RSWPPCCSAAPSGQ 271 PPR R C R C S S Q Sbjct: 855 TPPRGRPCPQRRSSSCGSTGSSHQ 878
>YRA1_YEAST (Q12159) RNA annealing protein YRA1| Length = 226 Score = 32.3 bits (72), Expect = 0.80 Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 8/136 (5%) Frame = +3 Query: 6 GATAXCRPKPLPAINGDHRLMALPPRR--VLAATRSAPSQAAGVVPLVSSTAGDLQVQDP 179 G T P+ + G R +LP RR + TR+ P+ A V L+ +T + Sbjct: 26 GGTRGNGPRRVGKQVGSQR-RSLPNRRGPIRKNTRAPPNAVARVAKLLDTTREVKVNVEG 84 Query: 180 LPSP*QAFPYRPELAAAEAGLRVAVRRHLGSGASPGCS------GDGERGGGHRHPGDPA 341 LP + R A+ G++ + + G S G + G+ R R G P Sbjct: 85 LPRDIKQDAVREFFASQVGGVQRVLLSYNERGQSTGMANITFKNGELARRAVERFNGSPI 144 Query: 342 AGGRDRLLLPLRCSPD 389 GGR RL L L P+ Sbjct: 145 DGGRSRLRLNLIVDPN 160
>DXS1_STRCO (Q9X7W3) 1-deoxy-D-xylulose-5-phosphate synthase 1 (EC 2.2.1.7)| (1-deoxyxylulose-5-phosphate synthase 1) (DXP synthase 1) (DXPS 1) Length = 656 Score = 32.3 bits (72), Expect = 0.80 Identities = 34/114 (29%), Positives = 45/114 (39%), Gaps = 8/114 (7%) Frame = +3 Query: 54 DHRLMALPPRRVLAATRSAPSQAAGVVPLVSSTAGDLQVQDP-----LPSP*QAFPYRPE 218 D L L R L A S+AAGV V+ GD +V P +P A R E Sbjct: 540 DPALAPLAARHRLVAVVEDNSRAAGVGSAVALALGDAEVDVPVRRFGIPEQFLAHAKRAE 599 Query: 219 LAAAEAGLRVAVRRHLGSG---ASPGCSGDGERGGGHRHPGDPAAGGRDRLLLP 371 + A V V + + A P +GD G PGD G R+++P Sbjct: 600 VLADIGLTPVDVAGRIAASLALAEP--AGDRAGGPAVEQPGDGRMSGDGRIVMP 651
>TWST1_MOUSE (P26687) Twist-related protein 1 (M-twist)| Length = 206 Score = 32.0 bits (71), Expect = 1.0 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = +3 Query: 204 PYRPELAAAEAGLRV--AVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGGRDR 359 P R + A+ + G R + RR G A PG + G GGG PG PA G R + Sbjct: 24 PDRQQPASGKRGARKRRSSRRSAGGSAGPGGATGGGIGGGD-EPGSPAQGKRGK 76
>NOG2_CRYGA (Q6TGJ8) Nucleolar GTP-binding protein 2| Length = 731 Score = 32.0 bits (71), Expect = 1.0 Identities = 23/67 (34%), Positives = 31/67 (46%) Frame = -1 Query: 519 ELSEVDKRCPEHQTGEEEVREHELQIRLDELALEPPQPHPVHDNRGSNEEVEEGDRGHRR 340 E+ + DK E + EEE + + +ELA E P D EEVEE D+ Sbjct: 587 EVVDQDKEMVEKEEEEEEEEDEDEDEEEEELAWEDVFPEEA-DAVDGGEEVEESDK-EET 644 Query: 339 QDPQDVD 319 D +DVD Sbjct: 645 DDEEDVD 651
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 26.6 bits (57), Expect(2) = 1.1 Identities = 17/49 (34%), Positives = 17/49 (34%) Frame = +3 Query: 204 PYRPELAAAEAGLRVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGG 350 P RP G R G G G G G R GG G P GG Sbjct: 311 PQRPAAGPRPGGGGPGGRGPGGGGRPGGPGGGGGRPGGGGFAGRPGGGG 359 Score = 23.9 bits (50), Expect(2) = 1.1 Identities = 14/40 (35%), Positives = 16/40 (40%) Frame = +2 Query: 53 RSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSP 172 R P G P PR PGG R PG+ R + P Sbjct: 282 RPTPGGMPRPQAPRPGGA---PGGNRPNPGMMPQRPAAGP 318
>SSR2_RAT (P30680) Somatostatin receptor type 2 (SS2R) (SRIF-1)| Length = 369 Score = 31.6 bits (70), Expect = 1.4 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +1 Query: 325 ILGILPPVAAIAFFYLFVAPPIIMNWMRLRWFKRKFIETYLQFMFTYLFFPGLMLWAPFV 504 ILG L P+ I YLF+ + + +R+ KRK E + M + + + W PF Sbjct: 214 ILGFLVPLTIICLCYLFIIIKVKSSGIRVGSSKRKKSEKKVTRMVSIVVAVFIFCWLPFY 273 Query: 505 NF 510 F Sbjct: 274 IF 275
>SSR2_PIG (P34994) Somatostatin receptor type 2 (SS2R) (SRIF-1)| Length = 369 Score = 31.6 bits (70), Expect = 1.4 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +1 Query: 325 ILGILPPVAAIAFFYLFVAPPIIMNWMRLRWFKRKFIETYLQFMFTYLFFPGLMLWAPFV 504 ILG L P+ I YLF+ + + +R+ KRK E + M + + + W PF Sbjct: 214 ILGFLVPLTIICLCYLFIIIKVKSSGIRVGSSKRKKSEKKVTRMVSIVVAVFIFCWLPFY 273 Query: 505 NF 510 F Sbjct: 274 IF 275
>SSR2_MOUSE (P30875) Somatostatin receptor type 2 (SS2R) (SRIF-1)| Length = 369 Score = 31.6 bits (70), Expect = 1.4 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +1 Query: 325 ILGILPPVAAIAFFYLFVAPPIIMNWMRLRWFKRKFIETYLQFMFTYLFFPGLMLWAPFV 504 ILG L P+ I YLF+ + + +R+ KRK E + M + + + W PF Sbjct: 214 ILGFLVPLTIICLCYLFIIIKVKSSGIRVGSSKRKKSEKKVTRMVSIVVAVFIFCWLPFY 273 Query: 505 NF 510 F Sbjct: 274 IF 275
>SSR2_HUMAN (P30874) Somatostatin receptor type 2 (SS2R) (SRIF-1)| Length = 369 Score = 31.6 bits (70), Expect = 1.4 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +1 Query: 325 ILGILPPVAAIAFFYLFVAPPIIMNWMRLRWFKRKFIETYLQFMFTYLFFPGLMLWAPFV 504 ILG L P+ I YLF+ + + +R+ KRK E + M + + + W PF Sbjct: 214 ILGFLVPLTIICLCYLFIIIKVKSSGIRVGSSKRKKSEKKVTRMVSIVVAVFIFCWLPFY 273 Query: 505 NF 510 F Sbjct: 274 IF 275
>SSR2_BOVIN (P34993) Somatostatin receptor type 2 (SS2R) (SRIF-1)| Length = 368 Score = 31.6 bits (70), Expect = 1.4 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +1 Query: 325 ILGILPPVAAIAFFYLFVAPPIIMNWMRLRWFKRKFIETYLQFMFTYLFFPGLMLWAPFV 504 ILG L P+ I YLF+ + + +R+ KRK E + M + + + W PF Sbjct: 213 ILGFLVPLTIICLCYLFIIIKVKSSGIRVGSSKRKKSEKKVTRMVSIVVAVFIFCWLPFY 272 Query: 505 NF 510 F Sbjct: 273 IF 274
>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 31.6 bits (70), Expect = 1.4 Identities = 22/64 (34%), Positives = 27/64 (42%) Frame = +3 Query: 96 ATRSAPSQAAGVVPLVSSTAGDLQVQDPLPSP*QAFPYRPELAAAEAGLRVAVRRHLGSG 275 A SAPS A V +STA + + P PSP P A L A R +G Sbjct: 537 ARSSAPSPA--VTAAATSTAAAISTRAPTPSPAGRAPAADPRRAGAPALAGAARAEVGRN 594 Query: 276 ASPG 287 +PG Sbjct: 595 GNPG 598
>FUBP2_RAT (Q99PF5) Far upstream element-binding protein 2 (FUSE-binding| protein 2) (KH type splicing regulatory protein) (KSRP) (MAP2 RNA trans-acting protein 1) (MARTA1) Length = 721 Score = 31.6 bits (70), Expect = 1.4 Identities = 14/28 (50%), Positives = 15/28 (53%) Frame = +3 Query: 267 GSGASPGCSGDGERGGGHRHPGDPAAGG 350 G G PG G G+RGGG G P GG Sbjct: 27 GGGPPPGPPGAGDRGGGGPGGGGPGGGG 54
>SSR4_MOUSE (P49660) Somatostatin receptor type 4 (SS4R)| Length = 384 Score = 31.6 bits (70), Expect = 1.4 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = +1 Query: 325 ILGILPPVAAIAFFYLFVAPPIIMNWMRLRWFKRKFIETYLQFMFTYLFFPGLMLWAPF 501 +LG LPPV AI YL + + +R W +R+ E + + + ++ W PF Sbjct: 213 LLGFLPPVLAIGLCYLLIVGKMRAVALRGGWQQRRRSEKKITRLVLMVVTVFVLCWMPF 271
>CF001_HUMAN (Q86T20) Protein C6orf1 precursor| Length = 159 Score = 31.6 bits (70), Expect = 1.4 Identities = 29/82 (35%), Positives = 34/82 (41%), Gaps = 15/82 (18%) Frame = +2 Query: 14 GXLPPKASACHQWRSP------PHGASSPSRPR-------CH--PLCS*PGGRRRAPGLF 148 G + S CH W S PH PS P CH PL S PG GL Sbjct: 47 GRVATSTSGCHCWMSRRDLTPLPH----PSEPGVLDCLGPCHLLPLLS-PGSPCWVLGLH 101 Query: 149 NSRRSPSPGSSAVSMTSLSLPP 214 S PS S++ ++T SLPP Sbjct: 102 FSLHPPSAASASHALTITSLPP 123
>HNRLL_MOUSE (Q921F4) Heterogeneous nuclear ribonucleoprotein L-like| Length = 591 Score = 31.2 bits (69), Expect = 1.8 Identities = 21/79 (26%), Positives = 32/79 (40%) Frame = +3 Query: 267 GSGASPGCSGDGERGGGHRHPGDPAAGGRDRLLLPLRCSPDYHELDEAEVVQAQVHRDVS 446 G G G GDG+ GG G + GG + L +H++ + VV R + Sbjct: 78 GEGGEEGDEGDGDEGGSGGDEGG-SGGGPRSMPLSTEGGGSHHKVSVSPVVHV---RGLC 133 Query: 447 AVHVHVPLLPRFDALGTVC 503 V L+ + GT+C Sbjct: 134 ESVVEADLVEALEKFGTIC 152
>WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protein-related| protein) (WIP-and CR16-homologous protein) Length = 440 Score = 31.2 bits (69), Expect = 1.8 Identities = 23/69 (33%), Positives = 29/69 (42%) Frame = +2 Query: 56 SPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTSLSLPPRARSCRS 235 S P S+P P+ H R+ PG P P S++ S+ S PP AR Sbjct: 266 SSPTNESAPELPQRHNSL-----HRKTPGPVRGLAPPPPTSASPSLLSNRPPPPARD--- 317 Query: 236 WPPCCSAAP 262 PP AAP Sbjct: 318 -PPSRGAAP 325
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 31.2 bits (69), Expect = 1.8 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 2/72 (2%) Frame = +2 Query: 8 RHGXLPPKASACHQWRSP-PHGASSPS-RPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSS 181 R G P +++ + RSP P+ SPS RPR S P RR A R+SPSP + Sbjct: 680 RKGSSPGRST--REARSPQPNKRHSPSPRPRAPQTSSPPPVRRGASASPQGRQSPSPSTR 737 Query: 182 AVSMTSLSLPPR 217 + S + P+ Sbjct: 738 PIRRVSRTPEPK 749 Score = 30.0 bits (66), Expect = 4.0 Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 3/65 (4%) Frame = +2 Query: 59 PPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMT---SLSLPPRARSC 229 PP P R R P P RRR P RRSPSP + + S S PP+ R+ Sbjct: 578 PPPPPPPPPRRRRSPT---PPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTA 634 Query: 230 RSWPP 244 PP Sbjct: 635 SPPPP 639 Score = 29.6 bits (65), Expect = 5.2 Identities = 34/111 (30%), Positives = 44/111 (39%), Gaps = 21/111 (18%) Frame = +2 Query: 5 RRHGXLPPKASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPS----- 169 RR+ PP PP +SPS P + P ++R+P + RRSPS Sbjct: 621 RRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSPTV-TKRRSPSLSSKH 679 Query: 170 -PGSSAVSMT------------SLSLPPRARSCRSWPPC---CSAAPSGQR 274 GSS T S S PRA S PP SA+P G++ Sbjct: 680 RKGSSPGRSTREARSPQPNKRHSPSPRPRAPQTSSPPPVRRGASASPQGRQ 730
>CWC21_USTMA (Q4P0G6) Pre-mRNA-splicing factor CWC21| Length = 348 Score = 31.2 bits (69), Expect = 1.8 Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 2/90 (2%) Frame = +2 Query: 23 PPKASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSP--GSSAVSMT 196 P + S+ H + SSP R R + R+ S RSP+P S S + Sbjct: 196 PARCSSTHSQSTSSSSPSSPPRKRARSRSASQDSSARSSSSHASPRSPTPRTTSHVASYS 255 Query: 197 SLSLPPRARSCRSWPPCCSAAPSGQRCKPR 286 S S R+RS RS P + S R + R Sbjct: 256 SYSSRSRSRS-RSRSPLSHSRSSRSRSRSR 284
>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1| Length = 917 Score = 31.2 bits (69), Expect = 1.8 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 2/72 (2%) Frame = +2 Query: 8 RHGXLPPKASACHQWRSP-PHGASSPS-RPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSS 181 R G P +++ + RSP P+ SPS RPR S P RR A R+SPSP + Sbjct: 675 RKGSSPSRST--REARSPQPNKRHSPSPRPRAPQTSSPPPVRRGASSSPQRRQSPSPSTR 732 Query: 182 AVSMTSLSLPPR 217 + S + P+ Sbjct: 733 PIRRVSRTPEPK 744 Score = 28.9 bits (63), Expect = 8.9 Identities = 28/83 (33%), Positives = 32/83 (38%), Gaps = 3/83 (3%) Frame = +2 Query: 5 RRHGXLPPKASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSA 184 RR PP R P A P R R P RRR P RRSPSP + Sbjct: 560 RRRSPSPPPTRR----RRSPSPAPPPRRRRTPT----PPPRRRTPSPPPRRRSPSPRRYS 611 Query: 185 VSMT---SLSLPPRARSCRSWPP 244 + S S PP+ R+ PP Sbjct: 612 PPIQRRYSPSPPPKRRTASPPPP 634
>CENG1_HUMAN (Q99490) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) (GTP-binding and GTPase activating protein 2) (GGAP2) Length = 1192 Score = 31.2 bits (69), Expect = 1.8 Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 5/91 (5%) Frame = +2 Query: 56 SPPHGASSPSRPRCHPLCS*P--GGRR---RAPGLFNSRRSPSPGSSAVSMTSLSLPPRA 220 S P GA S SR PL S P GG R G SP PG+ + + PP Sbjct: 131 SKPGGAPSSSR---RPLLSSPSWGGPEPEGRTGGGVPGSSSPHPGTGSRRLKVAPPPPAP 187 Query: 221 RSCRSWPPCCSAAPSGQRCKPRLLWRR*AGR 313 + C++ + A G+ RL W G+ Sbjct: 188 KPCKTVTTSGAKAGGGKGAGSRLSWPESEGK 218
>MYSB_ACACA (P19706) Myosin heavy chain IB (Myosin heavy chain IL)| Length = 1147 Score = 27.7 bits (60), Expect(2) = 2.3 Identities = 12/28 (42%), Positives = 13/28 (46%) Frame = +3 Query: 264 LGSGASPGCSGDGERGGGHRHPGDPAAG 347 +G PG G G G G PG P AG Sbjct: 1012 MGGPGGPGRGGPGGPGAGRGGPGGPGAG 1039 Score = 21.6 bits (44), Expect(2) = 2.3 Identities = 18/54 (33%), Positives = 21/54 (38%) Frame = +2 Query: 14 GXLPPKASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPG 175 G P A A + P A+ PS R P PG R PG+ R P G Sbjct: 950 GYSQPVAQAQPVAQVPQPVAAVPSAGRGGPGMGGPGAGRGGPGM--GRGGPGMG 1001
>WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protein-related| protein) Length = 440 Score = 30.8 bits (68), Expect = 2.3 Identities = 23/69 (33%), Positives = 28/69 (40%) Frame = +2 Query: 56 SPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTSLSLPPRARSCRS 235 S P S+P P+ H R+ PG P P S+ S+ S PP AR Sbjct: 266 SSPTNESAPELPQRHNSL-----HRKTPGPVRGLAPPPPTSATPSLLSNRPPPPARE--- 317 Query: 236 WPPCCSAAP 262 PP AAP Sbjct: 318 -PPSRGAAP 325
>SMAD7_HUMAN (O15105) Mothers against decapentaplegic homolog 7 (SMAD 7)| (Mothers against DPP homolog 7) (Smad7) (hSMAD7) Length = 426 Score = 30.8 bits (68), Expect = 2.3 Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 5/36 (13%) Frame = +3 Query: 255 RRHLGSGASPG----CSGDGERGG-GHRHPGDPAAG 347 R H G PG C G RG GH HP PAAG Sbjct: 46 RAHGAGGGGPGRAGCCLGKAVRGAKGHHHPHPPAAG 81
>TWST1_EULFU (Q8MIF3) Twist-related protein 1| Length = 198 Score = 30.8 bits (68), Expect = 2.3 Identities = 17/39 (43%), Positives = 20/39 (51%) Frame = +3 Query: 243 RVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGGRDR 359 R + RR G GA PG + G GG PG PA G R + Sbjct: 39 RRSSRRSAGGGAGPGGAAGGVGGGD--EPGSPAQGKRGK 75
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 30.8 bits (68), Expect = 2.3 Identities = 34/98 (34%), Positives = 42/98 (42%), Gaps = 3/98 (3%) Frame = +2 Query: 5 RRHGXLPPKASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSA 184 RR PP A + RSP S P PR S P RRR+P RRSPSP + Sbjct: 540 RRRSPSPPPA---RRRRSP----SPPPPPRRRRSPSLP--RRRSPSPPPRRRSPSPRRYS 590 Query: 185 VSMT---SLSLPPRARSCRSWPPCCSAAPSGQRCKPRL 289 + S S PP+ R+ PP A + K R+ Sbjct: 591 PPIQRRYSPSPPPKRRTASPPPPPKRRASPSPQSKRRV 628
>PRD13_HUMAN (Q9H4Q3) PR domain zinc finger protein 13 (PR domain-containing| protein 13) Length = 717 Score = 30.8 bits (68), Expect = 2.3 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%) Frame = +3 Query: 204 PYRPELAAAEAGLRVAVRRHLGSGASPGCSGDGER----GGGHRH 326 PYR E ++++ G +A+ R LG G + G G GE G GH H Sbjct: 321 PYREE-SSSKQGAGLALGRLLGGGRACGRPGSGENSAAGGAGHHH 364
>ETV2_MOUSE (P41163) ETS translocation variant 2 (Ets-related protein 71)| Length = 335 Score = 30.8 bits (68), Expect = 2.3 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = +2 Query: 116 PGGRRRAPGL-FNSRRSPSPGSSAVSMTSLSLPPRARSCRSWPPCCSAAPSG 268 P G +P + F +P +SA + S S PP A S SW CS PSG Sbjct: 107 PPGTSPSPFVGFEGATGQNPATSAGGVPSWSHPPAAWSTTSWD--CSVGPSG 156
>IF2_PELLD (Q3B1Z8) Translation initiation factor IF-2| Length = 915 Score = 30.4 bits (67), Expect = 3.0 Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 2/76 (2%) Frame = +3 Query: 15 AXCRPKPLPAINGDHRLMALPPRRVLAATRSAPSQAAGVVPLVS--STAGDLQVQDPLPS 188 A +P P+P G+ L P AT SAP+ A VP S A + +P+P Sbjct: 113 AAAQPAPVPVAAGEAP-SPLAPETPAPATESAPAVAPAGVPAAEPVSEALSAPLPEPVPE 171 Query: 189 P*QAFPYRPELAAAEA 236 P P +A EA Sbjct: 172 PVPEPPAPEVVAVVEA 187
>HIC1_HUMAN (Q14526) Hypermethylated in cancer 1 protein (Hic-1) (Zinc finger| and BTB domain-containing protein 29) Length = 733 Score = 30.4 bits (67), Expect = 3.0 Identities = 29/79 (36%), Positives = 35/79 (44%), Gaps = 2/79 (2%) Frame = +2 Query: 62 PHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVS--MTSLSLPPRARSCRS 235 P A S RC PLC GL S++SP PGS+A + LPPR S Sbjct: 225 PAAALCASERRCSPLC----------GLDLSKKSP-PGSAAPERPLAERELPPRPDS--- 270 Query: 236 WPPCCSAAPSGQRCKPRLL 292 PP SA P+ + P L Sbjct: 271 -PP--SAGPAAYKEPPLAL 286
>ENPP1_HUMAN (P22413) Ectonucleotide pyrophosphatase/phosphodiesterase 1 (E-NPP| 1) (Phosphodiesterase I/nucleotide pyrophosphatase 1) (Plasma-cell membrane glycoprotein PC-1) [Includes: Alkaline phosphodiesterase I (EC 3.1.4.1); Nucleotide pyrophosphatase Length = 925 Score = 30.4 bits (67), Expect = 3.0 Identities = 16/27 (59%), Positives = 18/27 (66%), Gaps = 2/27 (7%) Frame = +3 Query: 285 GCSGDGERGG-GHRHPGD-PAAGGRDR 359 GC+G G RGG G R P + PA GRDR Sbjct: 5 GCAGGGSRGGEGGRAPREGPAGNGRDR 31
>ZIC5_HUMAN (Q96T25) Zinc finger protein ZIC 5 (Zinc finger protein of the| cerebellum 5) Length = 639 Score = 30.4 bits (67), Expect = 3.0 Identities = 22/54 (40%), Positives = 25/54 (46%) Frame = +3 Query: 180 LPSP*QAFPYRPELAAAEAGLRVAVRRHLGSGASPGCSGDGERGGGHRHPGDPA 341 L P QAFP PE A A A A+ H G+G+ P G G G P PA Sbjct: 80 LSPPSQAFPAHPE-APAAAARAAALVAHPGAGSYP--CGGGSSGAQPSAPPPPA 130
>PRTP_TUHV2 (Q9WRL6) Probable processing and transport protein| Length = 782 Score = 30.0 bits (66), Expect = 4.0 Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 1/99 (1%) Frame = +3 Query: 210 RPELAAAEAGLRVAVRRHLGSGASPGCSGD-GERGGGHRHPGDPAAGGRDRLLLPLRCSP 386 R AA AG R A G+ A+ G + GE GG GDPAA D ++ + Sbjct: 417 RGAAAATAAGARGAAEGTGGAAAAGGAAAAAGEAAGGPFQCGDPAARAHD-VVREVHVRK 475 Query: 387 DYHELDEAEVVQAQVHRDVSAVHVHVPLLPRFDALGTVC 503 + +E+ +V + + + L + LGTVC Sbjct: 476 KAYLQKVSELGYNRVMQCIKGQEKLIKKLVNVNLLGTVC 514
>GAG_BIV27 (P19559) Gag polyprotein (p53) [Contains: Matrix protein p17;| Capsid protein p26; Nucleocapsid protein p14] Length = 476 Score = 30.0 bits (66), Expect = 4.0 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = +2 Query: 215 RARSCRSWPPCCSAAPSGQRCKPR 286 +AR+CRS CS+AP GQR +P+ Sbjct: 432 QARNCRSKNGKCSSAPYGQRSQPQ 455
>GAG_BIV06 (P19558) Gag polyprotein (p53) [Contains: Matrix protein p17;| Capsid protein p26; Nucleocapsid protein p14] Length = 476 Score = 30.0 bits (66), Expect = 4.0 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = +2 Query: 215 RARSCRSWPPCCSAAPSGQRCKPR 286 +AR+CRS CS+AP GQR +P+ Sbjct: 432 QARNCRSKNGKCSSAPYGQRSQPQ 455
>RL3_LISMO (Q8Y440) 50S ribosomal protein L3| Length = 209 Score = 30.0 bits (66), Expect = 4.0 Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 4/81 (4%) Frame = +3 Query: 237 GLRVAVRRHLGSGASPGCSGDGERGGGHRHPGD--PAAGGR--DRLLLPLRCSPDYHELD 404 G + ++RH G S G G R HR PG P A R LLP R + + Sbjct: 118 GFQGVIKRH---GQSRGPMAHGSRY--HRRPGSMGPVAPNRVFKNKLLPGRMGGEQITIQ 172 Query: 405 EAEVVQAQVHRDVSAVHVHVP 467 E+V+ V ++V V +VP Sbjct: 173 NLEIVKVDVEKNVLLVKGNVP 193
>RL3_LISMF (Q71WE6) 50S ribosomal protein L3| Length = 209 Score = 30.0 bits (66), Expect = 4.0 Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 4/81 (4%) Frame = +3 Query: 237 GLRVAVRRHLGSGASPGCSGDGERGGGHRHPGD--PAAGGR--DRLLLPLRCSPDYHELD 404 G + ++RH G S G G R HR PG P A R LLP R + + Sbjct: 118 GFQGVIKRH---GQSRGPMAHGSRY--HRRPGSMGPVAPNRVFKNKLLPGRMGGEQITIQ 172 Query: 405 EAEVVQAQVHRDVSAVHVHVP 467 E+V+ V ++V V +VP Sbjct: 173 NLEIVKVDVEKNVLLVKGNVP 193
>RL3_LISIN (Q927K7) 50S ribosomal protein L3| Length = 209 Score = 30.0 bits (66), Expect = 4.0 Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 4/81 (4%) Frame = +3 Query: 237 GLRVAVRRHLGSGASPGCSGDGERGGGHRHPGD--PAAGGR--DRLLLPLRCSPDYHELD 404 G + ++RH G S G G R HR PG P A R LLP R + + Sbjct: 118 GFQGVIKRH---GQSRGPMAHGSRY--HRRPGSMGPVAPNRVFKNKLLPGRMGGEQITIQ 172 Query: 405 EAEVVQAQVHRDVSAVHVHVP 467 E+V+ V ++V V +VP Sbjct: 173 NLEIVKVDVEKNVLLVKGNVP 193
>PHF2_MOUSE (Q9WTU0) PHD finger protein 2 (GRC5)| Length = 1096 Score = 30.0 bits (66), Expect = 4.0 Identities = 20/70 (28%), Positives = 36/70 (51%) Frame = -1 Query: 516 LSEVDKRCPEHQTGEEEVREHELQIRLDELALEPPQPHPVHDNRGSNEEVEEGDRGHRRQ 337 L+E + PEH + +++ +IRL E A + +P + S++EV +GDR + + Sbjct: 415 LAEHEDELPEHFRPSQLIKDLAKEIRLSENASKTVRPEV--NAAASSDEVCDGDR-EKEE 471 Query: 336 DPQDVDVLLP 307 P V+ P Sbjct: 472 PPSPVETTPP 481
>CN115_HUMAN (Q9H8Y1) Protein C14orf115| Length = 702 Score = 30.0 bits (66), Expect = 4.0 Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 4/75 (5%) Frame = +3 Query: 78 PRRVLAATRSAPSQAAG-VVPLVSST---AGDLQVQDPLPSP*QAFPYRPELAAAEAGLR 245 P A T S G V+P S AG+ +DP P+P + P R L+ + LR Sbjct: 454 PALSAAGTPQLASVGEGAVIPWKSEAEEGAGNATGEDP-PAPGELLPLRMPLSRWQRRLR 512 Query: 246 VAVRRHLGSGASPGC 290 A RR + SG P C Sbjct: 513 RAARRQVLSGHLPFC 527
>DPY13_CAEEL (P17657) Cuticle collagen dpy-13 (Protein dumpy-13)| Length = 302 Score = 26.6 bits (57), Expect(2) = 4.3 Identities = 16/40 (40%), Positives = 18/40 (45%) Frame = +3 Query: 267 GSGASPGCSGDGERGGGHRHPGDPAAGGRDRLLLPLRCSP 386 GS A+PG G G PG P A G + LP C P Sbjct: 178 GSDAAPGEQGPKGPNGAPGKPGAPGAPGDEG--LPAVCEP 215 Score = 21.9 bits (45), Expect(2) = 4.3 Identities = 17/70 (24%), Positives = 21/70 (30%) Frame = +2 Query: 62 PHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTSLSLPPRARSCRSWP 241 P P RP G+ APG +PG + PP + C P Sbjct: 111 PGAPGKPGRP----------GKPGAPGF-----PGNPGKAPQKPCEEITPPPCKPCPQGP 155 Query: 242 PCCSAAPSGQ 271 P P Q Sbjct: 156 PGAPGLPGDQ 165
>SCMH1_MOUSE (Q8K214) Polycomb protein SCMH1 (Sex comb on midleg homolog 1)| Length = 706 Score = 29.6 bits (65), Expect = 5.2 Identities = 21/74 (28%), Positives = 27/74 (36%) Frame = +2 Query: 62 PHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTSLSLPPRARSCRSWP 241 PH S+PS+ P F +R P PGS T LS PP + + + Sbjct: 289 PHPTSTPSKSA-------------EPLKFPKKRGPKPGSKRKPRTLLSPPPTSPTTSTPE 335 Query: 242 PCCSAAPSGQRCKP 283 P S P P Sbjct: 336 PDTSTVPQDAATVP 349
>PHF2_HUMAN (O75151) PHD finger protein 2 (GRC5)| Length = 1101 Score = 29.6 bits (65), Expect = 5.2 Identities = 19/70 (27%), Positives = 36/70 (51%) Frame = -1 Query: 516 LSEVDKRCPEHQTGEEEVREHELQIRLDELALEPPQPHPVHDNRGSNEEVEEGDRGHRRQ 337 L+E + PEH + +++ +IRL E A + +P + S++EV +GDR + + Sbjct: 415 LAEHEDELPEHFKPSQLIKDLAKEIRLSENASKAVRPEV--NTVASSDEVCDGDR-EKEE 471 Query: 336 DPQDVDVLLP 307 P ++ P Sbjct: 472 PPSPIEATPP 481
>ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 29.6 bits (65), Expect = 5.2 Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 6/72 (8%) Frame = +3 Query: 90 LAATRSAPSQAAGVVP------LVSSTAGDLQVQDPLPSP*QAFPYRPELAAAEAGLRVA 251 + A +APS A G P + TA + + P PSP P A L A Sbjct: 527 VTAAAAAPSVARGSAPSPAVTAAATGTAAAISTRAPTPSPAGRAPAADPRRAGAPALAGA 586 Query: 252 VRRHLGSGASPG 287 R G +PG Sbjct: 587 ARAEAGRNGNPG 598
>GCNL2_HUMAN (Q92830) General control of amino acid synthesis protein 5-like 2| (EC 2.3.1.48) (Histone acetyltransferase GCN5) (hsGCN5) (STAF97) Length = 837 Score = 29.6 bits (65), Expect = 5.2 Identities = 28/95 (29%), Positives = 33/95 (34%) Frame = +3 Query: 66 MALPPRRVLAATRSAPSQAAGVVPLVSSTAGDLQVQDPLPSP*QAFPYRPELAAAEAGLR 245 MA P + A + P P + T P+P+P A P AAA AG Sbjct: 1 MAEPSQAPTPAPAAQPRPLQSPAPAPTPTPAPSPASAPIPTPTPA--PAPAPAAAPAG-- 56 Query: 246 VAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGG 350 S G G G GG GDPA G Sbjct: 57 -----------STGTGGPGVGSGGAGSGGDPARPG 80
>AFSR_STRCO (P25941) Regulatory protein afsR| Length = 993 Score = 29.6 bits (65), Expect = 5.2 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = -2 Query: 137 GHDACRLARSRAGGSEDATGRKRHEAVISIDGRQRLW 27 GH A +A +RAG E+A G + D RQRLW Sbjct: 865 GHFALGVALTRAGRHEEALGEFAEALDLFGDHRQRLW 901
>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4| (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130) Length = 1085 Score = 29.6 bits (65), Expect = 5.2 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 2/82 (2%) Frame = +2 Query: 20 LPPKASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTS 199 +PP A+A +G S+ + P P P G PG + +P+PG A S Sbjct: 297 VPPPAAA-------QNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKR 349 Query: 200 L--SLPPRARSCRSWPPCCSAA 259 + + PP A++ + P +AA Sbjct: 350 VVQAAPPAAQTLAASGPASTAA 371
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 29.6 bits (65), Expect = 5.2 Identities = 35/114 (30%), Positives = 42/114 (36%), Gaps = 2/114 (1%) Frame = +3 Query: 15 AXCRPK-PLPAINGDHRLMALPPRRVLAATRSA-PSQAAGVVPLVSSTAGDLQVQDPLPS 188 A RP P PA G + R A SA P A P S Q P P+ Sbjct: 69 AAPRPSAPSPAQAGPSQAAPAAGDRAAAPRPSAAPKAPAAQQPAAPSAPAPAPSQGPRPT 128 Query: 189 P*QAFPYRPELAAAEAGLRVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGG 350 P RP AA E A + ++P + G + GG R PG P GG Sbjct: 129 PGPKPAPRPAPAAPEFTAPPAAP---AAPSTPAPAPSGPKPGGAR-PGAPKPGG 178
>FBRL_DROME (Q9W1V3) Fibrillarin| Length = 344 Score = 29.6 bits (65), Expect = 5.2 Identities = 15/29 (51%), Positives = 15/29 (51%) Frame = +3 Query: 267 GSGASPGCSGDGERGGGHRHPGDPAAGGR 353 G GA G G G RGGG R G GGR Sbjct: 70 GRGAFGGRGGGGGRGGGGRGGGGRGGGGR 98
>IE18_PRVIF (P11675) Immediate-early protein IE180| Length = 1461 Score = 29.6 bits (65), Expect = 5.2 Identities = 22/65 (33%), Positives = 28/65 (43%) Frame = +2 Query: 71 ASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTSLSLPPRARSCRSWPPCC 250 A SPS PR P + RR A +S S S SS+ + P A R+ PP Sbjct: 369 ARSPSAPRA-PAAAAAAARRSASSSSSSSSSSSSSSSSEGEEDEGVRPGAPLARAGPPPS 427 Query: 251 SAAPS 265 AP+ Sbjct: 428 PPAPA 432 Score = 29.3 bits (64), Expect = 6.8 Identities = 22/61 (36%), Positives = 22/61 (36%) Frame = +3 Query: 204 PYRPELAAAEAGLRVAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGGRDRLLLPLRCS 383 P LAAAEAG R S ASP S G G G P R P R Sbjct: 149 PTPAALAAAEAGAPGGPGRSSPSAASPASSSSGSSGSS----GSPGPSAAPRRWSPARGD 204 Query: 384 P 386 P Sbjct: 205 P 205
>ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (Transcriptional| activator IE175) (Alpha-4 protein) Length = 1298 Score = 29.6 bits (65), Expect = 5.2 Identities = 27/71 (38%), Positives = 29/71 (40%), Gaps = 1/71 (1%) Frame = +3 Query: 177 PLPSP*QAFPYRPELAAAEAGLR-VAVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGGR 353 P P P A P P AAA+A R VAV R G P G + G H PAA Sbjct: 774 PGPEPAPAQPAAPRAAAAQARPRPVAVSRRPAEGPDP-LGGWRRQPPGPSHTAAPAAAA- 831 Query: 354 DRLLLPLRCSP 386 L CSP Sbjct: 832 ----LEAYCSP 838
>STRN4_HUMAN (Q9NRL3) Striatin-4 (Zinedin)| Length = 753 Score = 29.6 bits (65), Expect = 5.2 Identities = 30/99 (30%), Positives = 39/99 (39%), Gaps = 13/99 (13%) Frame = +3 Query: 216 ELAAAEAGLRVAVRRHLGSGASPGCSG-------------DGERGGGHRHPGDPAAGGRD 356 E AAA + R LGSGA PG +G G+ GGG PG A G + Sbjct: 4 ERAAAAVAAAASSCRPLGSGAGPGPTGAAPVSAPAPGPGPAGKGGGGGGSPGPTA--GPE 61 Query: 357 RLLLPLRCSPDYHELDEAEVVQAQVHRDVSAVHVHVPLL 473 L LP HE E +A+ + + + V L Sbjct: 62 PLSLPGILHFIQHEWARFEAEKARWEAERAELQAQVAFL 100
>BSN_MOUSE (O88737) Bassoon protein| Length = 3941 Score = 29.6 bits (65), Expect = 5.2 Identities = 21/66 (31%), Positives = 26/66 (39%) Frame = +2 Query: 77 SPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTSLSLPPRARSCRSWPPCCSA 256 +PS+ R P S P R AP P PG + + PPRA S P + Sbjct: 3807 APSQARLQPQ-SQPTTRGTAPAASQPAGKPQPGPTTAPGPQPAGPPRAEQASSSKPPAAK 3865 Query: 257 APSGQR 274 AP R Sbjct: 3866 APQQGR 3871
>PO4F2_HUMAN (Q12837) POU domain, class 4, transcription factor 2| (Brain-specific homeobox/POU domain protein 3B) (Brn-3B) Length = 410 Score = 26.2 bits (56), Expect(2) = 5.3 Identities = 22/75 (29%), Positives = 28/75 (37%), Gaps = 8/75 (10%) Frame = +3 Query: 267 GSGASPGCSGDGERGGGHRHPGDPAAGGRD---RLLLPLRCSPDYHELDEAEVVQAQVHR 437 G G G G G R G GG + R LP S + LDE+ + +A+ Sbjct: 57 GGGGGGGGGGGGGRSSSSSSSGSSGGGGSEAMRRACLPTPPSNIFGGLDESLLARAEALA 116 Query: 438 DVSAV-----HVHVP 467 V V H H P Sbjct: 117 AVDIVSQSKSHHHHP 131 Score = 21.9 bits (45), Expect(2) = 5.3 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = +2 Query: 119 GGRRRAPGLFNSRRSPSPGSSAVSMTSLSLP 211 GG +++ S SPGSSA S S P Sbjct: 17 GGSLHVEPKYSALHSTSPGSSAPIAPSASSP 47
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 26.2 bits (56), Expect(2) = 6.3 Identities = 12/32 (37%), Positives = 14/32 (43%) Frame = +3 Query: 255 RRHLGSGASPGCSGDGERGGGHRHPGDPAAGG 350 R G SPG +G G PG+P A G Sbjct: 290 RGERGEAGSPGIAGPKGEDGKDGSPGEPGANG 321 Score = 21.6 bits (44), Expect(2) = 6.3 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = +2 Query: 116 PGGRRRAPGLFNSRRSPSP 172 P G APGL +R P P Sbjct: 244 PAGIPGAPGLIGARGPPGP 262
>CHFR_MOUSE (Q810L3) Ubiquitin-protein ligase CHFR (EC 6.3.2.-) (Checkpoint| with forkhead and RING finger domains protein) Length = 664 Score = 29.3 bits (64), Expect = 6.8 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 4/80 (5%) Frame = -1 Query: 492 PEHQTGEEEVREHELQIRLDELALEPPQPHPVHDNRGSNEE-VEEGDRGHRRQD---PQD 325 P+ EE+VR + + ++ + L+P D GS+E+ +E D D P Sbjct: 366 PDKSRSEEDVRSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDISQPYI 425 Query: 324 VDVLLPAHRRQSSRGLHRCP 265 V P +RRQ+ + L CP Sbjct: 426 VCRQCPEYRRQAVQSL-PCP 444
>CHFR_HUMAN (Q96EP1) Ubiquitin-protein ligase CHFR (EC 6.3.2.-) (Checkpoint| with forkhead and RING finger domains protein) Length = 664 Score = 29.3 bits (64), Expect = 6.8 Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 4/80 (5%) Frame = -1 Query: 492 PEHQTGEEEVREHELQIRLDELALEPPQPHPVHDNRGSNEE-VEEGDRGHRRQD---PQD 325 P+ EE+V+ + + ++ + L+P D GS+E+ +E D D P Sbjct: 367 PDKSRSEEDVQSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDISQPYV 426 Query: 324 VDVLLPAHRRQSSRGLHRCP 265 V P +RRQ+++ H CP Sbjct: 427 VCRQCPEYRRQAAQPPH-CP 445
>CHS2_PARBR (Q92444) Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase 2) (Class-II chitin synthase 2) Length = 1043 Score = 29.3 bits (64), Expect = 6.8 Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 7/62 (11%) Frame = +2 Query: 80 PSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGS------SAVSMTSLSLPPRARS-CRSW 238 PS RCHPL P SR S SPG S ++ +L LP R+ S R W Sbjct: 31 PSPQRCHPLDQQSASTSSLP---TSRPSSSPGQSPNITPSILTSDTLHLPARSVSPTRPW 87 Query: 239 PP 244 P Sbjct: 88 TP 89
>BRC4_DROME (Q24206) Broad-complex core-protein isoform 6| Length = 880 Score = 29.3 bits (64), Expect = 6.8 Identities = 39/130 (30%), Positives = 44/130 (33%), Gaps = 14/130 (10%) Frame = +3 Query: 27 PKPLPAIN---GDHRLMALPPRRVLAATRSAPSQAAGVVPLVSSTAGDLQVQDPLPSP*Q 197 P P P+ + G H L LP L AT S AA + A SP Sbjct: 585 PPPPPSHHSHFGQHPLSLLPSHHQLHATHHELSAAAAHHAHAHAHAAHAHALARAGSP-- 642 Query: 198 AFPYRPELAAAEAGLRVAVRRHLGSGASPGCSGDGERGGGHRHPGDPA-----------A 344 + L A L SGA SG G RGGG PG P Sbjct: 643 -MEHHHLLHHRRASLSP-------SGAVSSASGAGGRGGGAGGPGGPGGSLLSSVRAQDV 694 Query: 345 GGRDRLLLPL 374 +RLLLPL Sbjct: 695 AQANRLLLPL 704
>NONA_DROVI (Q9GRW7) Protein no-on-transient A| Length = 697 Score = 29.3 bits (64), Expect = 6.8 Identities = 16/37 (43%), Positives = 16/37 (43%) Frame = +3 Query: 249 AVRRHLGSGASPGCSGDGERGGGHRHPGDPAAGGRDR 359 A R G G G G G GGG G GGRDR Sbjct: 191 AFRARGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRDR 227
>INO80_NEUCR (Q872I5) Putative DNA helicase ino-80 (EC 3.6.1.-)| Length = 2001 Score = 29.3 bits (64), Expect = 6.8 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = +3 Query: 75 PPRRVLAATRSAPSQAAGVVPLVSSTAGDLQVQDPLPSP*QAFPYRPE 218 PP ++ T + PS+AAGV+ S + L +P+P P P P+ Sbjct: 452 PPSKMSPGTSTNPSRAAGVM----SFSNILSSSEPVPRPRATSPNNPD 495
>CRIP3_HUMAN (Q6Q6R5) Cysteine-rich protein 3 (CRP3) (Chromosome 6 LIM-only| protein) (h6LIMo) Length = 217 Score = 29.3 bits (64), Expect = 6.8 Identities = 26/96 (27%), Positives = 33/96 (34%), Gaps = 9/96 (9%) Frame = +2 Query: 29 KASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFN---------SRRSPSPGSS 181 K CH SP A RP CH C G P N + +PSPG + Sbjct: 31 KCERCHSILSPGGHAEHNGRPYCHKPCY---GALFGPRGVNIGGVGSYLYNPPTPSPGCT 87 Query: 182 AVSMTSLSLPPRARSCRSWPPCCSAAPSGQRCKPRL 289 S PPR R + P G++ P + Sbjct: 88 TPLSPSSFSPPRPR---------TGLPQGKKSPPHM 114
>MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [Contains: MAP1| light chain LC2] Length = 2774 Score = 29.3 bits (64), Expect = 6.8 Identities = 28/82 (34%), Positives = 34/82 (41%), Gaps = 11/82 (13%) Frame = +2 Query: 23 PPKASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGL-----------FNSRRSPS 169 PP+ C + P G SS S R L RRAPG +RSP+ Sbjct: 2547 PPRPDVC---MADPEGLSSESG-RVERLREKGRPGRRAPGRAKPASPARRLDIRGKRSPT 2602 Query: 170 PGSSAVSMTSLSLPPRARSCRS 235 PG V TS ++ PR RS S Sbjct: 2603 PGKGPVDRTSRTV-PRPRSTPS 2623
>CEND3_HUMAN (Q8WWN8) Centaurin-delta 3 (Cnt-d3) (Arf-GAP, Rho-GAP, ankyrin repeat| and pleckstrin homology domain-containing protein 3) Length = 1544 Score = 29.3 bits (64), Expect = 6.8 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +2 Query: 161 SPSPGSSAVSMTSLSLPPRARSCRSWPPCCSAAPSGQ 271 SPS SS S + LP + + PPC S+ PS Q Sbjct: 1505 SPSQPSSPQSPSPTGLPTQTPGFPTQPPCTSSPPSSQ 1541
>ZIC2_HUMAN (O95409) Zinc finger protein ZIC 2 (Zinc finger protein of the| cerebellum 2) Length = 532 Score = 29.3 bits (64), Expect = 6.8 Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 4/88 (4%) Frame = +3 Query: 99 TRSAPSQAAGVVPLVSSTAGDLQVQDPLPSP*QAFPYRPELAAAEAGLRVAVRR----HL 266 + S+P+ ++G SST L P P + P AAA A A H Sbjct: 422 SESSPAASSGYE---SSTPPGLV--SPSAEPQSSSNLSPAAAAAAAAAAAAAAAVSAVHR 476 Query: 267 GSGASPGCSGDGERGGGHRHPGDPAAGG 350 G G+ G +G G GG G AGG Sbjct: 477 GGGSGSGGAGGGSGGGSGSGGGGGGAGG 504
>SSR4_HUMAN (P31391) Somatostatin receptor type 4 (SS4R)| Length = 388 Score = 29.3 bits (64), Expect = 6.8 Identities = 16/59 (27%), Positives = 27/59 (45%) Frame = +1 Query: 325 ILGILPPVAAIAFFYLFVAPPIIMNWMRLRWFKRKFIETYLQFMFTYLFFPGLMLWAPF 501 +LG L PV AI YL + + +R W +R+ E + + + ++ W PF Sbjct: 217 LLGFLLPVLAIGLCYLLIVGKMRAVALRAGWQQRRRSEKKITRLVLMVVVVFVLCWMPF 275
>SIX3_MOUSE (Q62233) Homeobox protein SIX3 (Sine oculis homeobox homolog 3)| Length = 333 Score = 29.3 bits (64), Expect = 6.8 Identities = 15/27 (55%), Positives = 16/27 (59%) Frame = +3 Query: 267 GSGASPGCSGDGERGGGHRHPGDPAAG 347 GSGAS G G G GGG+R G A G Sbjct: 35 GSGASGGGGGAGGGGGGNRAGGGGAGG 61
>SUV3_DROME (P20193) Protein suppressor of variegation 3-7| Length = 1250 Score = 29.3 bits (64), Expect = 6.8 Identities = 17/62 (27%), Positives = 26/62 (41%) Frame = -1 Query: 504 DKRCPEHQTGEEEVREHELQIRLDELALEPPQPHPVHDNRGSNEEVEEGDRGHRRQDPQD 325 DK+ E E++ RE + E + + H HD G E +E D G + D + Sbjct: 112 DKQASEDPLLEDQEREPDAMSTKTEPSSDAESSHSYHDPMGLLERIEIHDPGDSQDDDDE 171 Query: 324 VD 319 D Sbjct: 172 DD 173
>COL1_CAEEL (P08124) Cuticle collagen 1 precursor (Protein squat-3) (Protein| dumpy-15) Length = 296 Score = 25.8 bits (55), Expect(2) = 7.0 Identities = 18/62 (29%), Positives = 24/62 (38%) Frame = +2 Query: 59 PPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTSLSLPPRARSCRSW 238 PP A +P +P GR APG +PG V+ + PP + C Sbjct: 101 PPGPAGAPGKPG-------KPGRPGAPGT-----PGTPGKPPVAPCEPTTPPPCKPCPQG 148 Query: 239 PP 244 PP Sbjct: 149 PP 150 Score = 21.9 bits (45), Expect(2) = 7.0 Identities = 11/28 (39%), Positives = 11/28 (39%) Frame = +3 Query: 267 GSGASPGCSGDGERGGGHRHPGDPAAGG 350 G PG GD G PG AA G Sbjct: 151 GPPGPPGAPGDPGEAGTPGRPGTDAAPG 178
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 25.4 bits (54), Expect(2) = 7.8 Identities = 12/32 (37%), Positives = 13/32 (40%) Frame = +3 Query: 255 RRHLGSGASPGCSGDGERGGGHRHPGDPAAGG 350 R G SPG G G PG+P A G Sbjct: 445 RGERGEAGSPGIPGPKGEDGKDGSPGEPGANG 476 Score = 21.9 bits (45), Expect(2) = 7.8 Identities = 9/22 (40%), Positives = 11/22 (50%) Frame = +2 Query: 116 PGGRRRAPGLFNSRRSPSPGSS 181 P G APGL +R P P + Sbjct: 399 PAGIPGAPGLIGARGPPGPAGT 420
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 25.4 bits (54), Expect(2) = 7.8 Identities = 12/32 (37%), Positives = 13/32 (40%) Frame = +3 Query: 255 RRHLGSGASPGCSGDGERGGGHRHPGDPAAGG 350 R G SPG G G PG+P A G Sbjct: 445 RGERGEAGSPGIPGPKGEDGKDGSPGEPGANG 476 Score = 21.9 bits (45), Expect(2) = 7.8 Identities = 9/22 (40%), Positives = 11/22 (50%) Frame = +2 Query: 116 PGGRRRAPGLFNSRRSPSPGSS 181 P G APGL +R P P + Sbjct: 399 PAGIPGAPGLLGARGPPGPAGA 420
>V70K_TYMVA (P20131) 69 kDa protein| Length = 628 Score = 28.9 bits (63), Expect = 8.9 Identities = 25/69 (36%), Positives = 27/69 (39%), Gaps = 2/69 (2%) Frame = +2 Query: 44 HQWRSPPHGASSPSRPRCHPLCS*PGGRRR--APGLFNSRRSPSPGSSAVSMTSLSLPPR 217 H PPH + P R R L P RR AP FNS R P P S + P Sbjct: 191 HVHDDPPHSSLRPGRSRSRQLQ--PTIRRPLLAPNQFNSPRQPPPLSDDPGILG-PCPLA 247 Query: 218 ARSCRSWPP 244 S R PP Sbjct: 248 PNSTRDPPP 256
>IP3KB_HUMAN (P27987) Inositol-trisphosphate 3-kinase B (EC 2.7.1.127) (Inositol| 1,4,5-trisphosphate 3-kinase B) (IP3K B) (IP3 3-kinase B) (IP3K-B) Length = 946 Score = 28.9 bits (63), Expect = 8.9 Identities = 21/58 (36%), Positives = 24/58 (41%) Frame = +2 Query: 59 PPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAVSMTSLSLPPRARSCR 232 PP + SP PR PGG R NS GSS S++S S R R R Sbjct: 59 PPAESLSPEEPRS------PGGWRSGRRRLNSSSGSGSGSSGSSVSSPSWAGRLRGDR 110
>THOC4_MOUSE (O08583) THO complex subunit 4 (Tho4) (RNA and export| factor-binding protein 1) (REF1-I) (Ally of AML-1 and LEF-1) (Aly/REF) Length = 254 Score = 28.9 bits (63), Expect = 8.9 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = -3 Query: 112 GAERVAARTRRGGSAMRR*SPLMAGRGFGRQXAVAPY 2 GA + AAR RGG MR + G G + APY Sbjct: 39 GAVQAAARVNRGGGPMRNRPAIARGAAGGGRNRPAPY 75
>ACRBP_CAVPO (Q60485) Acrosin-binding protein precursor (Proacrosin-binding| protein sp32) Length = 543 Score = 28.9 bits (63), Expect = 8.9 Identities = 13/56 (23%), Positives = 29/56 (51%) Frame = -1 Query: 477 GEEEVREHELQIRLDELALEPPQPHPVHDNRGSNEEVEEGDRGHRRQDPQDVDVLL 310 G+E+ H+ + ++ +P Q H D + E+ EE + ++++ Q V+ +L Sbjct: 188 GQEQAAGHKQEQGQEQHKQDPTQEHKQDDGQEQEEQEEEQEEEGKQEEGQSVEDML 243
>VG49_BPMD2 (O64239) Gene 49 protein (Gp49)| Length = 192 Score = 28.9 bits (63), Expect = 8.9 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 6/39 (15%) Frame = +3 Query: 261 HLGSGASPGCSGDGERGGGHRH------PGDPAAGGRDR 359 +LG G+ P G G GGG +H A GG +R Sbjct: 111 NLGGGSKPNSGGGGSGGGGQQHQSRAPQQAQEAPGGEER 149
>SOX3_MOUSE (P53784) Transcription factor SOX-3| Length = 375 Score = 28.9 bits (63), Expect = 8.9 Identities = 18/50 (36%), Positives = 24/50 (48%) Frame = +3 Query: 168 VQDPLPSP*QAFPYRPELAAAEAGLRVAVRRHLGSGASPGCSGDGERGGG 317 V P P+ P P AA ++G A + G+G S G +G G GGG Sbjct: 13 VGPPTPAAGTGVPAAPG-AAGKSGANPAGGANAGNGGSGGANGGGGGGGG 61
>KPRS3_ORYSA (Q8S2E5) Ribose-phosphate pyrophosphokinase 3 (EC 2.7.6.1)| (Phosphoribosyl pyrophosphate synthetase 3) Length = 409 Score = 28.9 bits (63), Expect = 8.9 Identities = 24/77 (31%), Positives = 32/77 (41%) Frame = +3 Query: 90 LAATRSAPSQAAGVVPLVSSTAGDLQVQDPLPSP*QAFPYRPELAAAEAGLRVAVRRHLG 269 +A SA + A+ + T P PSP AF RP A+ AG R+ HLG Sbjct: 1 MATAASASASASPAAAFGAKTRRPGPSPSPSPSPASAFA-RPSPRASAAG-RLHASLHLG 58 Query: 270 SGASPGCSGDGERGGGH 320 ++ G S G H Sbjct: 59 GASATGSSIVSNASGIH 75
>GPMA_PASMU (Q9CKU9) 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase| (EC 5.4.2.1) (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM) (dPGM) Length = 227 Score = 28.9 bits (63), Expect = 8.9 Identities = 13/44 (29%), Positives = 21/44 (47%) Frame = -1 Query: 516 LSEVDKRCPEHQTGEEEVREHELQIRLDELALEPPQPHPVHDNR 385 L +DK+ Q G+E+V + L+P PH H++R Sbjct: 92 LQGLDKKATAEQYGDEQVHIWRRSYDISPPDLDPQDPHSAHNDR 135
>ZEP2_MOUSE (Q3UHF7) Human immunodeficiency virus type I enhancer-binding protein| 2 homolog (Myc intron-binding protein 1) (MIBP-1) Length = 2430 Score = 28.9 bits (63), Expect = 8.9 Identities = 29/99 (29%), Positives = 33/99 (33%), Gaps = 12/99 (12%) Frame = +2 Query: 8 RHGXLPPKASACHQWRSPPHGASSPSRPRCHPLCS*PGGRRRAPGLFNSRRSPSPGSSAV 187 R G C Q RS + SPS + HP A G F R PGS A Sbjct: 1485 RQGCASEPKDGCFQSRSSSFSSLSPSSSQDHP---------SASGPFPPNREILPGSRAP 1535 Query: 188 SMTSLSLPPRAR------------SCRSWPPCCSAAPSG 268 S P +R S S P SA P+G Sbjct: 1536 PRRKFSGPSESRESSDELDMDETSSDMSMSPQSSALPTG 1574
>FUBP2_HUMAN (Q92945) Far upstream element-binding protein 2 (FUSE-binding| protein 2) (KH type splicing regulatory protein) (KSRP) (p75) Length = 707 Score = 28.9 bits (63), Expect = 8.9 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = +3 Query: 267 GSGASPGCSGDGERGGGHRHPGDPAAG 347 G G PG G G+RGGG G P G Sbjct: 27 GGGPPPGPPGAGDRGGGGPCGGGPGGG 53
>SSR4_RAT (P30937) Somatostatin receptor type 4 (SS4R)| Length = 384 Score = 28.9 bits (63), Expect = 8.9 Identities = 16/59 (27%), Positives = 27/59 (45%) Frame = +1 Query: 325 ILGILPPVAAIAFFYLFVAPPIIMNWMRLRWFKRKFIETYLQFMFTYLFFPGLMLWAPF 501 +LG L PV AI YL + + +R W +R+ E + + + ++ W PF Sbjct: 213 LLGFLLPVLAIGLCYLLIVGKMRAVALRAGWQQRRRSEKKITRLVLMVVTVFVLCWMPF 271
>BAI2_HUMAN (O60241) Brain-specific angiogenesis inhibitor 2 precursor| Length = 1572 Score = 28.9 bits (63), Expect = 8.9 Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 3/35 (8%) Frame = +3 Query: 276 ASPGCSGDGERGGGH---RHPGDPAAGGRDRLLLP 371 A PGCS GE G G PG PAA L+P Sbjct: 207 AQPGCSCPGEAGAGSTTTTSPGPPAAHTLSNALVP 241
>RN2H_SYNY3 (P73177) Hypothetical ribonuclease sll1290 (EC 3.1.-.-)| Length = 666 Score = 28.9 bits (63), Expect = 8.9 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Frame = +3 Query: 24 RPKPLPAINGDHRLMALPPR--RVLAATRSAPSQAAGVVPLVSSTAG-DLQVQDPLP 185 R +P P + D L++LPP R A R P G+ P ++ G DL Q P Sbjct: 479 RGQPQPELPSDEELLSLPPGPVRECAVRRCMPRSEVGITPSRHASLGLDLYSQATSP 535 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,938,761 Number of Sequences: 219361 Number of extensions: 1719058 Number of successful extensions: 9212 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 7245 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9028 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
