ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd27c22 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1211 bits (611), Expect = 0.0 Identities = 623/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 119986 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttaaactgcctgctg 119928 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119927 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 119868 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119867 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 119808 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119807 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 119748 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119747 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 119688 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119687 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 119628 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119627 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 119568 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119567 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 119508 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119507 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 119448 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119447 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 119388 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 119387 ttatggacccgaacctgggtgatcta 119362 Score = 1211 bits (611), Expect = 0.0 Identities = 623/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 94908 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttaaactgcctgctg 94966 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94967 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 95026 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95027 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 95086 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95087 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 95146 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95147 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 95206 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95207 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 95266 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95267 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 95326 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95327 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 95386 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95387 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 95446 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95447 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 95506 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 95507 ttatggacccgaacctgggtgatcta 95532
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1195 bits (603), Expect = 0.0 Identities = 621/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 118767 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 118709 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118708 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 118649 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118648 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 118589 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118588 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 118529 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 118528 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 118469 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118468 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 118409 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118408 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 118349 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118348 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 118289 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118288 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 118229 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 118228 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 118169 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 118168 ttatggacccgaacctgggtgatcta 118143
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1195 bits (603), Expect = 0.0 Identities = 621/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 119851 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 119793 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119792 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 119733 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119732 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 119673 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119672 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 119613 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119612 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 119553 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119552 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 119493 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119492 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 119433 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119432 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 119373 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119372 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 119313 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 119312 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 119253 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 119252 ttatggacccgaacctgggtgatcta 119227 Score = 1195 bits (603), Expect = 0.0 Identities = 621/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 95305 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 95363 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95364 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 95423 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95424 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 95483 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95484 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 95543 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95544 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 95603 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95604 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 95663 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95664 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 95723 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95724 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 95783 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95784 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 95843 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 95844 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 95903 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 95904 ttatggacccgaacctgggtgatcta 95929
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1195 bits (603), Expect = 0.0 Identities = 621/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 119851 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 119793 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119792 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 119733 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119732 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 119673 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119672 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 119613 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119612 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 119553 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119552 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 119493 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119492 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 119433 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119432 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 119373 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119372 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 119313 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 119312 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 119253 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 119252 ttatggacccgaacctgggtgatcta 119227 Score = 1195 bits (603), Expect = 0.0 Identities = 621/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 95305 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 95363 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95364 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 95423 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95424 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 95483 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95484 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 95543 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95544 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 95603 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95604 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 95663 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95664 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 95723 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95724 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 95783 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95784 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 95843 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 95844 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 95903 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 95904 ttatggacccgaacctgggtgatcta 95929
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1195 bits (603), Expect = 0.0 Identities = 621/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 119800 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 119742 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119741 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 119682 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119681 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 119622 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119621 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 119562 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119561 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 119502 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119501 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 119442 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119441 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 119382 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119381 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 119322 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119321 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 119262 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 119261 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 119202 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 119201 ttatggacccgaacctgggtgatcta 119176 Score = 1195 bits (603), Expect = 0.0 Identities = 621/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 95250 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 95308 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95309 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 95368 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95369 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 95428 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95429 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 95488 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95489 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 95548 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95549 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 95608 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95609 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 95668 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95669 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 95728 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95729 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 95788 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 95789 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 95848 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 95849 ttatggacccgaacctgggtgatcta 95874
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1195 bits (603), Expect = 0.0 Identities = 621/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 31507883 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 31507941 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507942 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 31508001 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508002 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 31508061 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508062 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 31508121 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 31508122 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 31508181 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508182 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 31508241 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508242 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 31508301 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508302 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 31508361 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508362 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 31508421 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 31508422 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 31508481 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 31508482 ttatggacccgaacctgggtgatcta 31508507
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1195 bits (603), Expect = 0.0 Identities = 621/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 84713 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 84655 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84654 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 84595 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84594 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 84535 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84534 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 84475 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 84474 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 84415 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84414 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 84355 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84354 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 84295 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84294 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 84235 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84234 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 84175 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 84174 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 84115 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 84114 ttatggacccgaacctgggtgatcta 84089
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1195 bits (603), Expect = 0.0 Identities = 621/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 119820 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 119762 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119761 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 119702 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119701 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 119642 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119641 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 119582 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119581 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 119522 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119521 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 119462 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119461 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 119402 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119401 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 119342 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119341 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 119282 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 119281 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 119222 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 119221 ttatggacccgaacctgggtgatcta 119196 Score = 1195 bits (603), Expect = 0.0 Identities = 621/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 95298 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 95356 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95357 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 95416 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95417 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 95476 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95477 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 95536 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95537 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 95596 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95597 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 95656 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95657 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 95716 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95717 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 95776 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95777 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 95836 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 95837 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 95896 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 95897 ttatggacccgaacctgggtgatcta 95922
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1195 bits (603), Expect = 0.0 Identities = 621/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 58539 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 58481 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58480 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 58421 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58420 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 58361 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58360 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 58301 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 58300 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 58241 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58240 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 58181 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58180 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 58121 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58120 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 58061 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58060 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 58001 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 58000 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 57941 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 57940 ttatggacccgaacctgggtgatcta 57915
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1195 bits (603), Expect = 0.0 Identities = 621/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 9268232 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 9268290 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268291 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 9268350 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268351 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 9268410 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268411 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 9268470 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9268471 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 9268530 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268531 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 9268590 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268591 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 9268650 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268651 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 9268710 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268711 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 9268770 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 9268771 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 9268830 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 9268831 ttatggacccgaacctgggtgatcta 9268856 Score = 1187 bits (599), Expect = 0.0 Identities = 620/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 9227732 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 9227790 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227791 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 9227850 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227851 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 9227910 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227911 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 9227970 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9227971 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 9228030 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228031 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 9228090 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228091 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 9228150 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228151 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 9228210 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228211 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 9228270 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 9228271 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 9228330 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||| ||||||||| Sbjct: 9228331 ttatggacccgaacctaggtgatcta 9228356 Score = 1187 bits (599), Expect = 0.0 Identities = 620/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 9056146 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 9056204 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056205 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 9056264 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056265 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 9056324 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056325 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 9056384 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9056385 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 9056444 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9056445 gtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggctaaat 9056504 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056505 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 9056564 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056565 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 9056624 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056625 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 9056684 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 9056685 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 9056744 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 9056745 ttatggacccgaacctgggtgatcta 9056770 Score = 1172 bits (591), Expect = 0.0 Identities = 609/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 9164321 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 9164379 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164380 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 9164439 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164440 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 9164499 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164500 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 9164559 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9164560 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 9164619 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164620 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 9164679 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164680 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 9164739 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164740 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 9164799 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164800 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 9164859 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 9164860 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 9164919 Query: 602 ttatggacccgaac 615 |||||||||||||| Sbjct: 9164920 ttatggacccgaac 9164933 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 369 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 428 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 429 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 475 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1195 bits (603), Expect = 0.0 Identities = 621/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 19938217 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 19938275 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938276 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 19938335 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938336 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 19938395 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938396 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 19938455 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 19938456 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 19938515 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938516 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 19938575 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938576 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 19938635 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938636 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 19938695 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938696 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 19938755 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 19938756 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 19938815 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 19938816 ttatggacccgaacctgggtgatcta 19938841 Score = 1195 bits (603), Expect = 0.0 Identities = 621/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 10277214 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 10277156 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277155 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 10277096 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277095 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 10277036 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277035 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 10276976 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10276975 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 10276916 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276915 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 10276856 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276855 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 10276796 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276795 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 10276736 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276735 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 10276676 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 10276675 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 10276616 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 10276615 ttatggacccgaacctgggtgatcta 10276590 Score = 1187 bits (599), Expect = 0.0 Identities = 620/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 10387084 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 10387142 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387143 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 10387202 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387203 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 10387262 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387263 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 10387322 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10387323 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 10387382 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387383 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 10387442 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 10387443 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagt 10387502 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387503 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 10387562 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387563 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 10387622 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 10387623 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 10387682 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 10387683 ttatggacccgaacctgggtgatcta 10387708 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 387 agtaccgtgagggaaaggtgaaaagaacccc 417 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 212 ttgtgctgctaggcgaagcggttgagtgc 240 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1195 bits (603), Expect = 0.0 Identities = 621/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 31598399 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 31598457 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598458 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 31598517 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598518 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 31598577 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598578 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 31598637 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 31598638 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 31598697 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598698 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 31598757 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598758 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 31598817 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598818 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 31598877 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598878 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 31598937 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 31598938 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 31598997 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 31598998 ttatggacccgaacctgggtgatcta 31599023
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1195 bits (603), Expect = 0.0 Identities = 621/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 33525715 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 33525773 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525774 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 33525833 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525834 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 33525893 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525894 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 33525953 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 33525954 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 33526013 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526014 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 33526073 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526074 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 33526133 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526134 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 33526193 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526194 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 33526253 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 33526254 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 33526313 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 33526314 ttatggacccgaacctgggtgatcta 33526339 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 391 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 450 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 451 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 510 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 511 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677981 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 16677926 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 405 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 464 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 465 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 514 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 371 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 417 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 371 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 417 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 398 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 436 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1195 bits (603), Expect = 0.0 Identities = 621/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 47826 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 47768 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47767 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 47708 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47707 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 47648 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47647 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 47588 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 47587 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 47528 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47527 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 47468 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47467 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 47408 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47407 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 47348 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47347 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 47288 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 47287 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 47228 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 47227 ttatggacccgaacctgggtgatcta 47202
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1195 bits (603), Expect = 0.0 Identities = 621/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 70912 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 70970 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70971 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 71030 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71031 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 71090 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71091 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 71150 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 71151 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 71210 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71211 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 71270 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71271 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 71330 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71331 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 71390 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71391 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 71450 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 71451 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 71510 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 71511 ttatggacccgaacctgggtgatcta 71536 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 371 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 417 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 371 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 417 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1195 bits (603), Expect = 0.0 Identities = 621/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 84 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 142 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 202 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 262 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 263 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 322 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 323 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 382 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 383 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 442 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 502 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 503 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 562 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 563 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 622 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 623 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 682 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 683 ttatggacccgaacctgggtgatcta 708
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1195 bits (603), Expect = 0.0 Identities = 621/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 19949493 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 19949551 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949552 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 19949611 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949612 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 19949671 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949672 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 19949731 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 19949732 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 19949791 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949792 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 19949851 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949852 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 19949911 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949912 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 19949971 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949972 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 19950031 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 19950032 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 19950091 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 19950092 ttatggacccgaacctgggtgatcta 19950117 Score = 1195 bits (603), Expect = 0.0 Identities = 621/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 10283253 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 10283195 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283194 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 10283135 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283134 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 10283075 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283074 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 10283015 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10283014 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 10282955 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282954 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 10282895 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282894 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 10282835 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282834 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 10282775 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282774 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 10282715 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 10282714 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 10282655 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 10282654 ttatggacccgaacctgggtgatcta 10282629 Score = 1187 bits (599), Expect = 0.0 Identities = 620/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 10393123 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 10393181 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393182 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 10393241 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393242 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 10393301 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393302 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 10393361 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10393362 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 10393421 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393422 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 10393481 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 10393482 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagt 10393541 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393542 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 10393601 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393602 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 10393661 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 10393662 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 10393721 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 10393722 ttatggacccgaacctgggtgatcta 10393747 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 371 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 417 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 212 ttgtgctgctaggcgaagcggttgagtgc 240 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1195 bits (603), Expect = 0.0 Identities = 621/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 119794 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 119736 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119735 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 119676 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119675 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 119616 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119615 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 119556 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119555 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 119496 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119495 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 119436 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119435 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 119376 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119375 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 119316 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119315 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 119256 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 119255 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 119196 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 119195 ttatggacccgaacctgggtgatcta 119170 Score = 1195 bits (603), Expect = 0.0 Identities = 621/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 95245 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 95303 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95304 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 95363 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95364 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 95423 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95424 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 95483 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95484 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 95543 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95544 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 95603 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95604 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 95663 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95664 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 95723 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95724 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 95783 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 95784 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 95843 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 95844 ttatggacccgaacctgggtgatcta 95869
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1187 bits (599), Expect = 0.0 Identities = 620/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 897 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 839 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 838 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 779 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 778 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 719 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 659 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 658 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 599 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 539 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 538 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 479 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 478 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 419 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 359 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 358 gggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 299 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 298 ttatggacccgaacctgggtgatcta 273
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1187 bits (599), Expect = 0.0 Identities = 620/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 14072 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 14130 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14131 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 14190 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14191 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 14250 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14251 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 14310 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 14311 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 14370 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 14371 gtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggctaaat 14430 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14431 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 14490 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14491 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 14550 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14551 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 14610 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 14611 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 14670 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 14671 ttatggacccgaacctgggtgatcta 14696 Score = 1172 bits (591), Expect = 0.0 Identities = 609/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 122347 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 122405 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122406 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 122465 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122466 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 122525 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122526 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 122585 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 122586 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 122645 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122646 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 122705 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122706 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 122765 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122766 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 122825 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122826 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 122885 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 122886 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 122945 Query: 602 ttatggacccgaac 615 |||||||||||||| Sbjct: 122946 ttatggacccgaac 122959
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1187 bits (599), Expect = 0.0 Identities = 620/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 140880 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 140938 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140939 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 140998 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140999 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 141058 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141059 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 141118 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 141119 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 141178 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 141179 gtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggctaaat 141238 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141239 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 141298 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141299 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 141358 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141359 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 141418 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 141419 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 141478 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 141479 ttatggacccgaacctgggtgatcta 141504
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1187 bits (599), Expect = 0.0 Identities = 620/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 93476 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 93534 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93535 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 93594 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93595 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 93654 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93655 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 93714 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 93715 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 93774 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93775 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 93834 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 93835 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagt 93894 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93895 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 93954 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93955 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 94014 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 94015 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 94074 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 94075 ttatggacccgaacctgggtgatcta 94100
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1187 bits (599), Expect = 0.0 Identities = 620/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 20307 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 20365 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20366 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 20425 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20426 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 20485 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20486 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 20545 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 20546 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 20605 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20606 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 20665 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20666 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 20725 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20726 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 20785 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20786 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 20845 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 20846 gggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 20905 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 20906 ttatggacccgaacctgggtgatcta 20931 Score = 1172 bits (591), Expect = 0.0 Identities = 618/626 (98%), Gaps = 1/626 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 44811 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 44753 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44752 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 44693 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44692 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 44633 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44632 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 44573 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 44572 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 44513 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44512 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 44453 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44452 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 44393 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44392 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 44333 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44332 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 44273 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 ||||| ||||||| |||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 44272 gggaatggaaccctccggagccgtagtgaaagcgagtcttcatagggcgattgtcactgc 44213 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 44212 ttatggacccgaacctgggtgatcta 44187
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1187 bits (599), Expect = 0.0 Identities = 620/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 1440 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 1382 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1381 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 1322 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1321 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 1262 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 1202 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1201 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 1142 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 1082 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 1022 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1021 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 962 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 961 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 902 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 901 gggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 842 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 841 ttatggacccgaacctgggtgatcta 816
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1187 bits (599), Expect = 0.0 Identities = 620/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 27540 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 27598 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27599 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 27658 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27659 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 27718 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27719 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 27778 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 27779 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 27838 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27839 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 27898 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 27899 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagt 27958 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27959 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 28018 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28019 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 28078 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 28079 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 28138 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 28139 ttatggacccgaacctgggtgatcta 28164
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1187 bits (599), Expect = 0.0 Identities = 620/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 123650 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 123592 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123591 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 123532 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123531 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 123472 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123471 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 123412 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 123411 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 123352 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123351 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 123292 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123291 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 123232 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123231 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 123172 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123171 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 123112 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 123111 gggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 123052 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 123051 ttatggacccgaacctgggtgatcta 123026 Score = 1187 bits (599), Expect = 0.0 Identities = 620/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 99187 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 99245 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99246 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 99305 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99306 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 99365 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99366 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 99425 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 99426 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 99485 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99486 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 99545 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99546 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 99605 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99606 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 99665 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99666 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 99725 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 99726 gggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 99785 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 99786 ttatggacccgaacctgggtgatcta 99811
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1187 bits (599), Expect = 0.0 Identities = 620/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 124367 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 124309 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124308 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 124249 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124248 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 124189 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124188 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 124129 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 124128 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 124069 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124068 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 124009 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124008 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 123949 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123948 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 123889 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123888 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 123829 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 123828 gggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 123769 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 123768 ttatggacccgaacctgggtgatcta 123743 Score = 1187 bits (599), Expect = 0.0 Identities = 620/626 (99%), Gaps = 1/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 99864 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 99922 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99923 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 99982 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99983 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 100042 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100043 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 100102 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 100103 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 100162 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100163 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 100222 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100223 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 100282 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100283 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 100342 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100343 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 100402 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 100403 gggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 100462 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 100463 ttatggacccgaacctgggtgatcta 100488
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1179 bits (595), Expect = 0.0 Identities = 619/626 (98%), Gaps = 1/626 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 9242049 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 9241991 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241990 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 9241931 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9241930 agaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaaaccgtga 9241871 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241870 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 9241811 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9241810 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 9241751 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241750 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 9241691 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241690 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 9241631 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241630 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 9241571 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9241570 tctctgaccgcgtgcctgttgaagaatgagctggcgactcataggcagtggcttggttaa 9241511 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 9241510 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 9241451 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 9241450 ttatggacccgaacctgggtgatcta 9241425 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 94 actgaaacatcttagtagccagaggaaaagaaag 127 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1179 bits (595), Expect = 0.0 Identities = 619/626 (98%), Gaps = 1/626 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 53262 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 53204 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53203 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 53144 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 53143 agaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaaaccgtga 53084 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53083 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 53024 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 53023 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 52964 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52963 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 52904 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52903 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 52844 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52843 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 52784 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 52783 tctctgaccgcgtgcctgttgaagaatgagctggcgactcataggcagtggcttggttaa 52724 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 52723 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 52664 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 52663 ttatggacccgaacctgggtgatcta 52638
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1176 bits (593), Expect = 0.0 Identities = 611/616 (99%), Gaps = 1/616 (0%) Strand = Plus / Plus Query: 12 catagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaatccatgag 71 ||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1 catagatccggag-attcccaaataggtcaaccttttgaactgcctgctgaatccatgag 59 Query: 72 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 119 Query: 132 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 179 Query: 192 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 239 Query: 252 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 311 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 240 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 299 Query: 312 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 359 Query: 372 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 419 Query: 432 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 479 Query: 492 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 539 Query: 552 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 611 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 540 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 599 Query: 612 gaacctgggtgatcta 627 |||||||||||||||| Sbjct: 600 gaacctgggtgatcta 615
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 1162 bits (586), Expect = 0.0 Identities = 598/602 (99%) Strand = Plus / Plus Query: 26 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 85 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 69 Query: 86 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 129 Query: 146 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 189 Query: 206 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 190 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 249 Query: 266 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 325 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 250 tagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacgtggaatccc 309 Query: 326 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 310 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 369 Query: 386 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 370 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 429 Query: 446 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 430 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 489 Query: 506 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 490 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 549 Query: 566 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 625 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 550 agcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatc 609 Query: 626 ta 627 || Sbjct: 610 ta 611
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1140 bits (575), Expect = 0.0 Identities = 615/626 (98%), Gaps = 2/626 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||| | Sbjct: 123589 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgccg 123531 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123530 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 123471 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123470 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 123411 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123410 aaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 123351 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||| Sbjct: 123350 gcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccga 123292 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123291 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 123232 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123231 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 123172 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123171 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 123112 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123111 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 123052 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 123051 gggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 122992 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 122991 ttatggacccgaacctgggtgatcta 122966 Score = 1140 bits (575), Expect = 0.0 Identities = 615/626 (98%), Gaps = 2/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||| | Sbjct: 99148 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgccg 99206 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99207 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 99266 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99267 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 99326 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99327 aaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 99386 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||| Sbjct: 99387 gcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccga 99445 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99446 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 99505 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99506 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 99565 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99566 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 99625 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99626 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 99685 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 99686 gggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 99745 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 99746 ttatggacccgaacctgggtgatcta 99771
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1140 bits (575), Expect = 0.0 Identities = 615/626 (98%), Gaps = 2/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||| | Sbjct: 5501 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgccg 5559 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5560 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 5619 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5620 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 5679 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5680 aaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 5739 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||| Sbjct: 5740 gcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccga 5798 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5799 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 5858 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5859 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 5918 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5919 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 5978 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5979 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 6038 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 6039 gggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 6098 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 6099 ttatggacccgaacctgggtgatcta 6124
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1140 bits (575), Expect = 0.0 Identities = 615/626 (98%), Gaps = 2/626 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||| | Sbjct: 89 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgccg 147 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 207 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 267 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 aaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 327 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||| Sbjct: 328 gcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccga 386 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 446 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 506 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 507 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 566 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 567 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 626 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 627 gggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 686 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 687 ttatggacccgaacctgggtgatcta 712
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1047 bits (528), Expect = 0.0 Identities = 543/547 (99%), Gaps = 1/547 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 81 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 139 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 199 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 259 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 260 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 319 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 320 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 379 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 439 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 499 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 500 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 559 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 619 Query: 542 gggaacg 548 ||||||| Sbjct: 620 gggaacg 626
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1029 bits (519), Expect = 0.0 Identities = 540/546 (98%), Gaps = 1/546 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 41 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 99 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 159 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 219 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 220 aaacggggttgtgggagagcagtacaagcgttgtgctgctaggcgaagcggttgagtgcc 279 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 280 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 339 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 399 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 459 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 460 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaattga 519 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 579 Query: 542 gggaac 547 |||||| Sbjct: 580 gggaac 585
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 985 bits (497), Expect = 0.0 Identities = 503/505 (99%) Strand = Plus / Plus Query: 123 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 183 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 243 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 302 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 303 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 363 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 423 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360 Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 420 Query: 543 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 602 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 421 ggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgct 480 Query: 603 tatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||| Sbjct: 481 tatggacccgaacctgggtgatcta 505
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 981 bits (495), Expect = 0.0 Identities = 501/503 (99%) Strand = Plus / Plus Query: 125 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 185 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 245 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 304 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 305 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 365 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 425 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 485 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 420 Query: 545 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 604 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 421 aacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctta 480 Query: 605 tggacccgaacctgggtgatcta 627 ||||||||||||||||||||||| Sbjct: 481 tggacccgaacctgggtgatcta 503
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 981 bits (495), Expect = 0.0 Identities = 501/503 (99%) Strand = Plus / Plus Query: 125 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 185 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 245 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 304 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 305 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 365 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 425 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 485 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 420 Query: 545 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 604 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 421 aacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctta 480 Query: 605 tggacccgaacctgggtgatcta 627 ||||||||||||||||||||||| Sbjct: 481 tggacccgaacctgggtgatcta 503
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 979 bits (494), Expect = 0.0 Identities = 500/502 (99%) Strand = Plus / Plus Query: 126 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 186 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 246 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 305 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 306 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 366 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 426 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 486 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 Query: 546 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 605 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 421 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 480 Query: 606 ggacccgaacctgggtgatcta 627 |||||||||||||||||||||| Sbjct: 481 ggacccgaacctgggtgatcta 502
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 979 bits (494), Expect = 0.0 Identities = 500/502 (99%) Strand = Plus / Plus Query: 126 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 186 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 246 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 305 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 306 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 366 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 426 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 486 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 423 Query: 546 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 605 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 424 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 483 Query: 606 ggacccgaacctgggtgatcta 627 |||||||||||||||||||||| Sbjct: 484 ggacccgaacctgggtgatcta 505
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 977 bits (493), Expect = 0.0 Identities = 595/626 (95%), Gaps = 10/626 (1%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||||||||||||||| |||||| ||||| Sbjct: 134137 tgaaaataagcatagatccggag-attcccgaataggtcaacctttcgaactgc-tgctg 134080 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134079 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 134020 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134019 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 133960 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 133959 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaatgct 133900 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 133899 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccga 133840 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133839 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 133780 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133779 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 133720 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| |||| Sbjct: 133719 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatgtga 133663 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133662 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 133603 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 133602 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 133548 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 133547 ttatggacccgaacctgggtgatcta 133522 Score = 977 bits (493), Expect = 0.0 Identities = 595/626 (95%), Gaps = 10/626 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||||||||||||||| |||||| ||||| Sbjct: 103834 tgaaaataagcatagatccggag-attcccgaataggtcaacctttcgaactgc-tgctg 103891 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103892 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 103951 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103952 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 104011 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 104012 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaatgct 104071 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 104072 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccga 104131 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104132 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 104191 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104192 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 104251 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| |||| Sbjct: 104252 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatgtga 104308 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104309 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 104368 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 104369 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 104423 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 104424 ttatggacccgaacctgggtgatcta 104449
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 975 bits (492), Expect = 0.0 Identities = 498/500 (99%) Strand = Plus / Plus Query: 128 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 188 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 248 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 307 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 308 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 368 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 428 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 488 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 420 Query: 548 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 607 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 421 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatgg 480 Query: 608 acccgaacctgggtgatcta 627 |||||||||||||||||||| Sbjct: 481 acccgaacctgggtgatcta 500
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 963 bits (486), Expect = 0.0 Identities = 489/490 (99%) Strand = Plus / Plus Query: 50 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 109 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 110 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 170 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 230 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 289 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 290 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 350 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 410 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 420 Query: 470 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 480 Query: 530 tggcttggtt 539 |||||||||| Sbjct: 481 tggcttggtt 490
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 961 bits (485), Expect = 0.0 Identities = 593/626 (94%), Gaps = 10/626 (1%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||||||||||||||| |||||| ||||| Sbjct: 139500 tgaaaataagcatagatccggag-attcccgaataggtcaacctttcgaactgc-tgctg 139443 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139442 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 139383 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139382 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 139323 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| | Sbjct: 139322 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtact 139263 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | |||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 139262 gcaccctagatggcgagagtccagtagccgaaagcatcactggcttacgctctgacccga 139203 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139202 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 139143 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139142 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 139083 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||| Sbjct: 139082 ggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttga 139026 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139025 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 138966 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||| ||||||||||||||||| ||||||| ||||||||||| Sbjct: 138965 g-----ggaacccaccggagccatagcgaaagcgagtcttcatagggcaattgtcactgc 138911 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 138910 ttatggacccgaacctgggtgatcta 138885 Score = 961 bits (485), Expect = 0.0 Identities = 593/626 (94%), Gaps = 10/626 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||||||||||||||| |||||| ||||| Sbjct: 110445 tgaaaataagcatagatccggag-attcccgaataggtcaacctttcgaactgc-tgctg 110502 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110503 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 110562 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110563 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 110622 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| | Sbjct: 110623 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtact 110682 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | |||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 110683 gcaccctagatggcgagagtccagtagccgaaagcatcactggcttacgctctgacccga 110742 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110743 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 110802 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110803 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 110862 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||| Sbjct: 110863 ggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttga 110919 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110920 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 110979 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||| ||||||||||||||||| ||||||| ||||||||||| Sbjct: 110980 g-----ggaacccaccggagccatagcgaaagcgagtcttcatagggcaattgtcactgc 111034 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 111035 ttatggacccgaacctgggtgatcta 111060
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 961 bits (485), Expect = 0.0 Identities = 593/626 (94%), Gaps = 10/626 (1%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||||||||||||||| |||||| ||||| Sbjct: 127778 tgaaaataagcatagatccggag-attcccgaataggtcaacctttcgaactgc-tgctg 127721 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127720 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 127661 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 127660 agaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgtga 127601 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 127600 aaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggagtgct 127541 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | |||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 127540 gcaccctagatggcgagagtccagtagccgaaaacatcactagcttacgctctgacccga 127481 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127480 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 127421 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127420 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 127361 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||||| |||||||||||||||||||| ||| |||| Sbjct: 127360 ggggagtgaaatagaacatgaaaccgtg---agctcccaagcagtgggaggagaatgtga 127304 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127303 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 127244 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 ||||| |||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 127243 gggaat-----ccaccgtagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 127189 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 127188 ttatggacccgaacctgggtgatcta 127163 Score = 961 bits (485), Expect = 0.0 Identities = 593/626 (94%), Gaps = 10/626 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||||||||||||||| |||||| ||||| Sbjct: 107144 tgaaaataagcatagatccggag-attcccgaataggtcaacctttcgaactgc-tgctg 107201 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107202 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 107261 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 107262 agaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgtga 107321 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 107322 aaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggagtgct 107381 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | |||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 107382 gcaccctagatggcgagagtccagtagccgaaaacatcactagcttacgctctgacccga 107441 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107442 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 107501 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107502 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 107561 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||||| |||||||||||||||||||| ||| |||| Sbjct: 107562 ggggagtgaaatagaacatgaaaccgtg---agctcccaagcagtgggaggagaatgtga 107618 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107619 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 107678 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 ||||| |||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 107679 gggaat-----ccaccgtagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 107733 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 107734 ttatggacccgaacctgggtgatcta 107759
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 954 bits (481), Expect = 0.0 Identities = 592/626 (94%), Gaps = 10/626 (1%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||| ||||||||||| |||||| ||||| Sbjct: 142022 tgaaaataagcatagatccggag-attcccgaatgggtcaacctttcgaactgc-tgctg 141965 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141964 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 141905 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141904 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 141845 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct: 141844 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgagtact 141785 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | ||||||||| |||||||||||||| ||||| |||||||||||| Sbjct: 141784 gcaccctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctgacccga 141725 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 141724 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaat 141665 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141664 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 141605 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||| Sbjct: 141604 ggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttga 141548 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141547 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 141488 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 141487 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 141433 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 141432 ttatggacccgaacctgggtgatcta 141407 Score = 954 bits (481), Expect = 0.0 Identities = 592/626 (94%), Gaps = 10/626 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||| ||||||||||| |||||| ||||| Sbjct: 111635 tgaaaataagcatagatccggag-attcccgaatgggtcaacctttcgaactgc-tgctg 111692 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111693 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 111752 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111753 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 111812 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct: 111813 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgagtact 111872 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | ||||||||| |||||||||||||| ||||| |||||||||||| Sbjct: 111873 gcaccctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctgacccga 111932 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 111933 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaat 111992 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111993 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 112052 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||| Sbjct: 112053 ggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttga 112109 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112110 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 112169 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 112170 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 112224 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 112225 ttatggacccgaacctgggtgatcta 112250
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 952 bits (480), Expect = 0.0 Identities = 592/626 (94%), Gaps = 14/626 (2%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||||||||||||||| |||||| ||||| Sbjct: 134895 tgaaaataagcatagatccggag-attcccgaataggtcaacctttcgaactgc-tgctg 134838 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134837 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 134778 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134777 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 134718 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||| Sbjct: 134717 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgct 134658 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||||| |||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 134657 gcaccctagatggctagagtccagtagccgaaagcatcactagcttacgttctaacccga 134598 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134597 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 134538 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134537 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 134478 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| | Sbjct: 134477 ggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaa----a 134425 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134424 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 134365 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 134364 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 134310 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 134309 ttatggacccgaacctgggtgatcta 134284 Score = 952 bits (480), Expect = 0.0 Identities = 592/626 (94%), Gaps = 14/626 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||||||||||||||| |||||| ||||| Sbjct: 105387 tgaaaataagcatagatccggag-attcccgaataggtcaacctttcgaactgc-tgctg 105444 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105445 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 105504 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105505 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 105564 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||| Sbjct: 105565 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgct 105624 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||||| |||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 105625 gcaccctagatggctagagtccagtagccgaaagcatcactagcttacgttctaacccga 105684 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105685 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 105744 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105745 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 105804 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| | Sbjct: 105805 ggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaa----a 105857 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105858 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 105917 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 105918 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 105972 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 105973 ttatggacccgaacctgggtgatcta 105998
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 948 bits (478), Expect = 0.0 Identities = 592/626 (94%), Gaps = 12/626 (1%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||||||||||||||| ||||||| ||||| Sbjct: 136505 tgaaaataagcatagatccggag-attcccgaataggtcaacctttcaaactgc-tgctg 136448 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136447 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 136388 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136387 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 136328 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 136327 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgct 136268 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 136267 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccga 136208 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136207 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 136148 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 136147 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 136088 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 136087 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg- 136032 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136031 -ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 135973 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 135972 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 135918 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 135917 ttatggacccgaacctgggtgatcta 135892 Score = 948 bits (478), Expect = 0.0 Identities = 592/626 (94%), Gaps = 12/626 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||||||||||||||| ||||||| ||||| Sbjct: 105920 tgaaaataagcatagatccggag-attcccgaataggtcaacctttcaaactgc-tgctg 105977 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105978 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 106037 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106038 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 106097 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 106098 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgct 106157 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 106158 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccga 106217 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106218 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 106277 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106278 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 106337 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 106338 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg- 106393 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106394 -ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 106452 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 106453 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 106507 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 106508 ttatggacccgaacctgggtgatcta 106533
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 930 bits (469), Expect = 0.0 Identities = 590/626 (94%), Gaps = 11/626 (1%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||||||| ||||||| ||||||| ||||| Sbjct: 132689 tgaaaataagcatagatccggag-attcccgaataggttaacctttcaaactgc-tgctg 132632 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132631 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 132572 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132571 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 132512 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 132511 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgct 132452 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132451 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 132392 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132391 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 132332 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 132331 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 132272 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 132271 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gg 132216 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132215 gctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 132156 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 132155 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 132101 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 132100 ttatggacccgaacctgggtgatcta 132075 Score = 930 bits (469), Expect = 0.0 Identities = 590/626 (94%), Gaps = 11/626 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||||||| ||||||| ||||||| ||||| Sbjct: 104189 tgaaaataagcatagatccggag-attcccgaataggttaacctttcaaactgc-tgctg 104246 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104247 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 104306 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104307 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 104366 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 104367 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgct 104426 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104427 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 104486 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104487 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 104546 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 104547 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 104606 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 104607 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gg 104662 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104663 gctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 104722 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 104723 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 104777 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 104778 ttatggacccgaacctgggtgatcta 104803
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 930 bits (469), Expect = 0.0 Identities = 590/626 (94%), Gaps = 11/626 (1%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| ||||||||| | |||||| ||||||| |||||||| |||||| ||||| Sbjct: 132912 tgaaaataagcgtagatccggag-attcccgaataggttaaccttttgaactgc-tgctg 132855 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132854 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 132795 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132794 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 132735 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| Sbjct: 132734 aaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggagtgcc 132675 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132674 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccga 132615 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132614 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 132555 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 132554 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 132495 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || Sbjct: 132494 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgg 132439 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132438 gctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 132379 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 132378 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 132324 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 132323 ttatggacccgaacctgggtgatcta 132298 Score = 930 bits (469), Expect = 0.0 Identities = 590/626 (94%), Gaps = 11/626 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| ||||||||| | |||||| ||||||| |||||||| |||||| ||||| Sbjct: 103852 tgaaaataagcgtagatccggag-attcccgaataggttaaccttttgaactgc-tgctg 103909 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103910 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 103969 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103970 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 104029 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| Sbjct: 104030 aaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggagtgcc 104089 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104090 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccga 104149 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104150 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 104209 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 104210 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 104269 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || Sbjct: 104270 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgg 104325 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104326 gctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 104385 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 104386 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 104440 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 104441 ttatggacccgaacctgggtgatcta 104466
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 930 bits (469), Expect = 0.0 Identities = 590/626 (94%), Gaps = 11/626 (1%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||||||| ||||||| ||||||| ||||| Sbjct: 132682 tgaaaataagcatagatccggag-attcccgaataggttaacctttcaaactgc-tgctg 132625 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132624 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 132565 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132564 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 132505 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 132504 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgct 132445 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132444 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 132385 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132384 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 132325 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 132324 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 132265 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 132264 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gg 132209 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132208 gctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 132149 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 132148 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 132094 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 132093 ttatggacccgaacctgggtgatcta 132068 Score = 930 bits (469), Expect = 0.0 Identities = 590/626 (94%), Gaps = 11/626 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||||||| ||||||| ||||||| ||||| Sbjct: 104187 tgaaaataagcatagatccggag-attcccgaataggttaacctttcaaactgc-tgctg 104244 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104245 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 104304 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104305 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 104364 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 104365 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgct 104424 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104425 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 104484 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104485 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 104544 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 104545 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 104604 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 104605 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gg 104660 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104661 gctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 104720 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 104721 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 104775 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 104776 ttatggacccgaacctgggtgatcta 104801
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 922 bits (465), Expect = 0.0 Identities = 589/626 (94%), Gaps = 11/626 (1%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||||||| ||||||| ||||||| ||||| Sbjct: 131581 tgaaaataagcatagatccggag-attcccgaataggttaacctttcaaactgc-tgctg 131524 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131523 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 131464 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131463 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 131404 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 131403 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgct 131344 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 131343 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccga 131284 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131283 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 131224 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 131223 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 131164 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 131163 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gg 131108 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131107 gctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 131048 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 131047 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 130993 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 130992 ttatggacccgaacctgggtgatcta 130967 Score = 922 bits (465), Expect = 0.0 Identities = 589/626 (94%), Gaps = 11/626 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||||||| ||||||| ||||||| ||||| Sbjct: 103054 tgaaaataagcatagatccggag-attcccgaataggttaacctttcaaactgc-tgctg 103111 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103112 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 103171 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103172 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 103231 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 103232 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgct 103291 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 103292 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccga 103351 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103352 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 103411 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 103412 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 103471 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 103472 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gg 103527 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103528 gctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 103587 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 103588 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 103642 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 103643 ttatggacccgaacctgggtgatcta 103668
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 922 bits (465), Expect = 0.0 Identities = 589/626 (94%), Gaps = 11/626 (1%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| ||||||||| | |||||| ||||||| |||||||| |||||| ||||| Sbjct: 133873 tgaaaataagcgtagatccggag-attcccgaataggttaaccttttgaactgc-tgctg 133816 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133815 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 133756 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133755 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 133696 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||| | |||||| |||||||||||||||||||| ||||||| Sbjct: 133695 aaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgcc 133636 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133635 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccga 133576 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133575 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 133516 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 133515 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 133456 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || Sbjct: 133455 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgg 133400 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133399 gctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 133340 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 133339 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 133285 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 133284 ttatggacccgaacctgggtgatcta 133259 Score = 922 bits (465), Expect = 0.0 Identities = 589/626 (94%), Gaps = 11/626 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| ||||||||| | |||||| ||||||| |||||||| |||||| ||||| Sbjct: 104776 tgaaaataagcgtagatccggag-attcccgaataggttaaccttttgaactgc-tgctg 104833 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104834 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 104893 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104894 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 104953 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||| | |||||| |||||||||||||||||||| ||||||| Sbjct: 104954 aaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgcc 105013 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105014 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccga 105073 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105074 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 105133 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 105134 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 105193 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || Sbjct: 105194 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgg 105249 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105250 gctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 105309 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 105310 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 105364 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 105365 ttatggacccgaacctgggtgatcta 105390
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 914 bits (461), Expect = 0.0 Identities = 588/626 (93%), Gaps = 11/626 (1%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||||||||||||||| |||||| ||||| Sbjct: 140274 tgaaaataagcatagatccggag-attcccgaataggtcaacctttcgaactgc-tgctg 140217 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140216 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 140157 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140156 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 140097 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||| Sbjct: 140096 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaatgct 140037 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 140036 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccga 139977 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139976 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 139917 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 139916 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 139857 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | || ||||||||||||||||| | | | | Sbjct: 139856 ggggagtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag-acgggg 139801 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139800 gctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 139741 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 139740 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 139686 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 139685 ttatggacccgaacctgggtgatcta 139660 Score = 914 bits (461), Expect = 0.0 Identities = 588/626 (93%), Gaps = 11/626 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||||||||||||||| |||||| ||||| Sbjct: 109786 tgaaaataagcatagatccggag-attcccgaataggtcaacctttcgaactgc-tgctg 109843 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109844 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 109903 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109904 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 109963 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||| Sbjct: 109964 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaatgct 110023 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 110024 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccga 110083 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110084 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 110143 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 110144 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 110203 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | || ||||||||||||||||| | | | | Sbjct: 110204 ggggagtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag-acgggg 110259 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110260 gctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 110319 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 110320 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 110374 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 110375 ttatggacccgaacctgggtgatcta 110400
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 914 bits (461), Expect = 0.0 Identities = 588/626 (93%), Gaps = 11/626 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| ||||||||| | |||||| ||||||| |||||||| |||||| ||||| Sbjct: 85 tgaaaataagcgtagatccggag-attcccgaataggttaaccttttgaactgc-tgctg 142 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 202 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 262 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||| | |||||| |||||||||||||||||||| ||||||| Sbjct: 263 aaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgcc 322 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 323 gcaccctagatggcgagagtccagtagccgagagcatcactagcttatgctctgacccga 382 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 383 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 442 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 443 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 502 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || Sbjct: 503 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgg 558 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 559 gctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 618 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 619 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 673 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 674 ttatggacccgaacctgggtgatcta 699
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 910 bits (459), Expect = 0.0 Identities = 589/627 (93%), Gaps = 13/627 (2%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| |||||||| |||||| ||||| Sbjct: 136214 tgaaaataagcatagatccggag-attcccgaatagggcaacctttcgaactgc-tgctg 136157 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136156 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 136097 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136096 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 136037 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgc 240 ||||||||||||||||||||||||||||||| ||||||||||||||||| | || ||| Sbjct: 136036 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgc 135977 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135976 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccg 135917 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135916 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 135857 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135856 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 135797 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 135796 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 135740 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135739 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 135682 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 135681 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 135627 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 135626 cttatggacccgaacctgggtgatcta 135600 Score = 910 bits (459), Expect = 0.0 Identities = 589/627 (93%), Gaps = 13/627 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| |||||||| |||||| ||||| Sbjct: 106416 tgaaaataagcatagatccggag-attcccgaatagggcaacctttcgaactgc-tgctg 106473 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106474 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 106533 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106534 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 106593 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgc 240 ||||||||||||||||||||||||||||||| ||||||||||||||||| | || ||| Sbjct: 106594 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgc 106653 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106654 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccg 106713 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106714 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 106773 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106774 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 106833 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 106834 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 106890 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106891 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 106948 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 106949 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 107003 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 107004 cttatggacccgaacctgggtgatcta 107030
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 910 bits (459), Expect = 0.0 Identities = 589/627 (93%), Gaps = 13/627 (2%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| |||||||| |||||| ||||| Sbjct: 136852 tgaaaataagcatagatccggag-attcccgaatagggcaacctttcgaactgc-tgctg 136795 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136794 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 136735 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136734 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 136675 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 240 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 136674 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 136615 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 136614 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 136555 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136554 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 136495 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 136494 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 136435 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 136434 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 136378 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136377 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 136320 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 136319 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 136265 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 136264 cttatggacccgaacctgggtgatcta 136238 Score = 910 bits (459), Expect = 0.0 Identities = 589/627 (93%), Gaps = 13/627 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| |||||||| |||||| ||||| Sbjct: 106705 tgaaaataagcatagatccggag-attcccgaatagggcaacctttcgaactgc-tgctg 106762 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106763 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 106822 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106823 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 106882 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 240 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 106883 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 106942 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106943 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 107002 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107003 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 107062 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 107063 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 107122 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 107123 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 107179 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107180 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 107237 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 107238 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 107292 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 107293 cttatggacccgaacctgggtgatcta 107319
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 910 bits (459), Expect = 0.0 Identities = 589/627 (93%), Gaps = 13/627 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| |||||||| |||||| ||||| Sbjct: 1610 tgaaaataagcatagatccggag-attcccgaatagggcaacctttcgaactgc-tgctg 1667 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1668 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 1727 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1728 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 1787 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgc 240 ||||||||||||||||||||||||||||||| ||||||||||||||||| | || ||| Sbjct: 1788 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgc 1847 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1848 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccg 1907 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1908 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 1967 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1968 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 2027 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 2028 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 2084 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2085 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 2142 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 2143 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 2197 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 2198 cttatggacccgaacctgggtgatcta 2224
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 910 bits (459), Expect = 0.0 Identities = 589/627 (93%), Gaps = 13/627 (2%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| |||||||| |||||| ||||| Sbjct: 135460 tgaaaataagcatagatccggag-attcccgaatagggcaacctttcgaactgc-tgctg 135403 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135402 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 135343 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135342 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 135283 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 240 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 135282 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 135223 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135222 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 135163 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135162 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 135103 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135102 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 135043 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 135042 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 134986 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134985 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 134928 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 134927 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 134873 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 134872 cttatggacccgaacctgggtgatcta 134846 Score = 910 bits (459), Expect = 0.0 Identities = 589/627 (93%), Gaps = 13/627 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| |||||||| |||||| ||||| Sbjct: 105576 tgaaaataagcatagatccggag-attcccgaatagggcaacctttcgaactgc-tgctg 105633 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105634 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 105693 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105694 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 105753 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 240 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 105754 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 105813 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105814 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 105873 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105874 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 105933 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 105934 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 105993 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 105994 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 106050 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106051 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 106108 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 106109 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 106163 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 106164 cttatggacccgaacctgggtgatcta 106190
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 910 bits (459), Expect = 0.0 Identities = 589/627 (93%), Gaps = 13/627 (2%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| |||||||| |||||| ||||| Sbjct: 135595 tgaaaataagcatagatccggag-attcccgaatagggcaacctttcgaactgc-tgctg 135538 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135537 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 135478 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135477 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 135418 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 240 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 135417 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 135358 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135357 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 135298 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135297 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 135238 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135237 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 135178 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 135177 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 135121 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135120 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 135063 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 135062 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 135008 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 135007 cttatggacccgaacctgggtgatcta 134981 Score = 910 bits (459), Expect = 0.0 Identities = 589/627 (93%), Gaps = 13/627 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| |||||||| |||||| ||||| Sbjct: 105748 tgaaaataagcatagatccggag-attcccgaatagggcaacctttcgaactgc-tgctg 105805 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105806 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 105865 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105866 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 105925 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 240 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 105926 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 105985 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105986 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 106045 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106046 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 106105 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106106 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 106165 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 106166 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 106222 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106223 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 106280 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 106281 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 106335 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 106336 cttatggacccgaacctgggtgatcta 106362
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 910 bits (459), Expect = 0.0 Identities = 589/627 (93%), Gaps = 13/627 (2%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| |||||||| |||||| ||||| Sbjct: 135593 tgaaaataagcatagatccggag-attcccgaatagggcaacctttcgaactgc-tgctg 135536 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135535 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 135476 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135475 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 135416 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 240 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 135415 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 135356 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135355 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 135296 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135295 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 135236 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135235 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 135176 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 135175 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 135119 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135118 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 135061 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 135060 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 135006 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 135005 cttatggacccgaacctgggtgatcta 134979 Score = 910 bits (459), Expect = 0.0 Identities = 589/627 (93%), Gaps = 13/627 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| |||||||| |||||| ||||| Sbjct: 105745 tgaaaataagcatagatccggag-attcccgaatagggcaacctttcgaactgc-tgctg 105802 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105803 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 105862 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105863 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 105922 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 240 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 105923 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 105982 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105983 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 106042 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106043 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 106102 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106103 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 106162 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 106163 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 106219 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106220 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 106277 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 106278 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 106332 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 106333 cttatggacccgaacctgggtgatcta 106359
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 910 bits (459), Expect = 0.0 Identities = 589/627 (93%), Gaps = 13/627 (2%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| |||||||| |||||| ||||| Sbjct: 135505 tgaaaataagcatagatccggag-attcccgaatagggcaacctttcgaactgc-tgctg 135448 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135447 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 135388 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135387 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 135328 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 240 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 135327 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 135268 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135267 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 135208 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135207 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 135148 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135147 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 135088 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 135087 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 135031 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135030 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 134973 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 134972 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 134918 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 134917 cttatggacccgaacctgggtgatcta 134891 Score = 910 bits (459), Expect = 0.0 Identities = 589/627 (93%), Gaps = 13/627 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| |||||||| |||||| ||||| Sbjct: 105623 tgaaaataagcatagatccggag-attcccgaatagggcaacctttcgaactgc-tgctg 105680 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105681 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 105740 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105741 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 105800 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 240 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 105801 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 105860 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105861 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 105920 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105921 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 105980 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 105981 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 106040 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 106041 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 106097 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106098 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 106155 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 106156 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 106210 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 106211 cttatggacccgaacctgggtgatcta 106237
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 910 bits (459), Expect = 0.0 Identities = 589/627 (93%), Gaps = 13/627 (2%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| |||||||| |||||| ||||| Sbjct: 136212 tgaaaataagcatagatccggag-attcccgaatagggcaacctttcgaactgc-tgctg 136155 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136154 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 136095 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136094 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 136035 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgc 240 ||||||||||||||||||||||||||||||| ||||||||||||||||| | || ||| Sbjct: 136034 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgc 135975 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135974 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccg 135915 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135914 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 135855 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135854 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 135795 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 135794 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 135738 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135737 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 135680 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 135679 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 135625 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 135624 cttatggacccgaacctgggtgatcta 135598 Score = 910 bits (459), Expect = 0.0 Identities = 589/627 (93%), Gaps = 13/627 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| |||||||| |||||| ||||| Sbjct: 106414 tgaaaataagcatagatccggag-attcccgaatagggcaacctttcgaactgc-tgctg 106471 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106472 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 106531 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106532 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 106591 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgc 240 ||||||||||||||||||||||||||||||| ||||||||||||||||| | || ||| Sbjct: 106592 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgc 106651 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106652 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccg 106711 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106712 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 106771 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106772 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 106831 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 106832 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 106888 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106889 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 106946 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 106947 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 107001 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 107002 cttatggacccgaacctgggtgatcta 107028
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 910 bits (459), Expect = 0.0 Identities = 589/627 (93%), Gaps = 13/627 (2%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| |||||||| |||||| ||||| Sbjct: 135943 tgaaaataagcatagatccgggg-attcccgaatagggcaacctttcgaactgc-tgctg 135886 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135885 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 135826 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135825 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 135766 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgc 240 ||||||||||||||||||||||||||||||| ||||||||||||||||| | || ||| Sbjct: 135765 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgc 135706 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135705 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccg 135646 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135645 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 135586 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135585 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 135526 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 135525 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 135469 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135468 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 135411 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 135410 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 135356 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 135355 cttatggacccgaacctgggtgatcta 135329 Score = 910 bits (459), Expect = 0.0 Identities = 589/627 (93%), Gaps = 13/627 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| |||||||| |||||| ||||| Sbjct: 106195 tgaaaataagcatagatccgggg-attcccgaatagggcaacctttcgaactgc-tgctg 106252 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106253 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 106312 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106313 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 106372 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgc 240 ||||||||||||||||||||||||||||||| ||||||||||||||||| | || ||| Sbjct: 106373 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgc 106432 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106433 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccg 106492 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106493 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 106552 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106553 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 106612 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 106613 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 106669 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106670 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 106727 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 106728 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 106782 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 106783 cttatggacccgaacctgggtgatcta 106809
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 906 bits (457), Expect = 0.0 Identities = 587/626 (93%), Gaps = 11/626 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| ||||||||| | |||||| ||||||||||||||| ||||||| ||||| Sbjct: 94 tgaaaataagcgtagatccggag-attcccgaataggtcaacctttcaaactgc-tgctg 151 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 152 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaa 211 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 271 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||| Sbjct: 272 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgct 331 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 332 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccga 391 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 451 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 452 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 511 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 512 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gg 567 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 gctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 627 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 628 g-----ggaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 682 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 683 ttatggacccgaacctgggtgatcta 708
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 902 bits (455), Expect = 0.0 Identities = 588/627 (93%), Gaps = 13/627 (2%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| |||||||| |||||| ||||| Sbjct: 135472 tgaaaataagcatagatccggag-attcccgaatagggcaacctttcgaactgc-tgctg 135415 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135414 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 135355 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135354 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 135295 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 240 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 135294 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 135235 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135234 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 135175 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135174 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 135115 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135114 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 135055 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 135054 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 134998 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 134997 --ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggtta 134940 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 134939 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 134885 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 134884 cttatggacccgaacctgggtgatcta 134858 Score = 902 bits (455), Expect = 0.0 Identities = 588/627 (93%), Gaps = 13/627 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| |||||||| |||||| ||||| Sbjct: 105590 tgaaaataagcatagatccggag-attcccgaatagggcaacctttcgaactgc-tgctg 105647 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105648 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 105707 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105708 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 105767 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 240 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 105768 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 105827 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105828 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 105887 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105888 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 105947 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 105948 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 106007 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 106008 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 106064 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 106065 --ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggtta 106122 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 106123 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 106177 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 106178 cttatggacccgaacctgggtgatcta 106204
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 898 bits (453), Expect = 0.0 Identities = 586/626 (93%), Gaps = 11/626 (1%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 |||||||||||| |||||||| | |||||| ||||||||||||||| |||| | ||||| Sbjct: 131705 tgaaaataagcagagatccggag-attcccgaataggtcaacctttcgaacttc-tgctg 131648 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131647 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 131588 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131587 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 131528 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||| | || |||||| Sbjct: 131527 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggagtgcg 131468 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131467 gaaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 131408 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131407 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 131348 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 131347 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 131288 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | ||||| |||||||||||||||| | || Sbjct: 131287 ggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggagggggaccaga 131231 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131230 -ccctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 131172 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 131171 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 131117 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 131116 ttatggacccgaacctgggtgatcta 131091 Score = 898 bits (453), Expect = 0.0 Identities = 586/626 (93%), Gaps = 11/626 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 |||||||||||| |||||||| | |||||| ||||||||||||||| |||| | ||||| Sbjct: 101740 tgaaaataagcagagatccggag-attcccgaataggtcaacctttcgaacttc-tgctg 101797 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101798 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 101857 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101858 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 101917 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||| | || |||||| Sbjct: 101918 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggagtgcg 101977 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101978 gaaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 102037 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102038 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 102097 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 102098 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 102157 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | ||||| |||||||||||||||| | || Sbjct: 102158 ggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggagggggaccaga 102214 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102215 -ccctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 102273 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 102274 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 102328 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 102329 ttatggacccgaacctgggtgatcta 102354
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 892 bits (450), Expect = 0.0 Identities = 583/623 (93%), Gaps = 11/623 (1%) Strand = Plus / Plus Query: 5 aaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaat 64 |||||||| ||||||||| | |||||| ||||||||||||||| ||||||| |||||||| Sbjct: 106094 aaataagcgtagatccggag-attcccgaataggtcaacctttcaaactgc-tgctgaat 106151 Query: 65 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 124 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106152 ccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 106211 Query: 125 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106212 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 106271 Query: 185 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 244 |||||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||| Sbjct: 106272 cggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgca 106331 Query: 245 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 304 ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106332 ccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagta 106391 Query: 305 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106392 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 106451 Query: 365 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 424 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106452 cctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 106511 Query: 425 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 484 ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | || Sbjct: 106512 gagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggact 106567 Query: 485 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106568 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 106625 Query: 545 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 604 |||||||||||||||||||||||||||||||||| || |||| |||||||||||||| Sbjct: 106626 ---ggaacccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgctta 106682 Query: 605 tggacccgaacctgggtgatcta 627 ||||||||||||||||||||||| Sbjct: 106683 tggacccgaacctgggtgatcta 106705 Score = 842 bits (425), Expect = 0.0 Identities = 582/626 (92%), Gaps = 14/626 (2%) Strand = Plus / Minus Query: 5 aaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaat 64 |||||||| ||||||||| | |||||| ||||||||||||||| ||||||| |||||||| Sbjct: 135815 aaataagcgtagatccggag-attcccgaataggtcaacctttcaaactgc-tgctgaat 135758 Query: 65 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 124 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135757 ccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 135698 Query: 125 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135697 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 135638 Query: 185 cggggttgtgggagagc-aatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 243 ||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||| || Sbjct: 135637 cggggttgtgggagagcaaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgc 135578 Query: 244 accctagatggctaaagtccagtagccgaaagcatcactagcttatg-ctctgacccgag 302 |||||||||||| | |||||||||||||||||||||||||||||| | | |||||||||| Sbjct: 135577 accctagatggcgagagtccagtagccgaaagcatcactagcttacgcccctgacccgag 135518 Query: 303 tagcatggggcacgtggaatcccgtgtgaatcag-caaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 135517 tagcatggggcacgtggaatcccgtgtgaatcagccaaggaccaccttgcaaggctaaat 135458 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 135457 actcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatc 135398 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | Sbjct: 135397 ggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgagg 135342 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135341 actctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 135282 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| || |||| ||||||||||| Sbjct: 135281 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgc 135227 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 135226 ttatggacccgaacctgggtgatcta 135201
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 892 bits (450), Expect = 0.0 Identities = 583/623 (93%), Gaps = 11/623 (1%) Strand = Plus / Minus Query: 5 aaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaat 64 |||||||| ||||||||| | |||||| ||||||||||||||| ||||||| |||||||| Sbjct: 136091 aaataagcgtagatccggag-attcccgaataggtcaacctttcaaactgc-tgctgaat 136034 Query: 65 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 124 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136033 ccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 135974 Query: 125 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135973 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 135914 Query: 185 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 244 |||||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||| Sbjct: 135913 cggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgca 135854 Query: 245 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 304 ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135853 ccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagta 135794 Query: 305 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135793 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 135734 Query: 365 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 424 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135733 cctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 135674 Query: 425 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 484 ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | || Sbjct: 135673 gagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggact 135618 Query: 485 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135617 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 135560 Query: 545 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 604 |||||||||||||||||||||||||||||||||| || |||| |||||||||||||| Sbjct: 135559 ---ggaacccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgctta 135503 Query: 605 tggacccgaacctgggtgatcta 627 ||||||||||||||||||||||| Sbjct: 135502 tggacccgaacctgggtgatcta 135480 Score = 892 bits (450), Expect = 0.0 Identities = 583/623 (93%), Gaps = 11/623 (1%) Strand = Plus / Plus Query: 5 aaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaat 64 |||||||| ||||||||| | |||||| ||||||||||||||| ||||||| |||||||| Sbjct: 106316 aaataagcgtagatccggag-attcccgaataggtcaacctttcaaactgc-tgctgaat 106373 Query: 65 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 124 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106374 ccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 106433 Query: 125 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106434 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 106493 Query: 185 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 244 |||||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||| Sbjct: 106494 cggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgca 106553 Query: 245 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 304 ||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106554 ccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagta 106613 Query: 305 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106614 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 106673 Query: 365 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 424 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106674 cctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggg 106733 Query: 425 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 484 ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | || Sbjct: 106734 gagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggact 106789 Query: 485 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106790 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-- 106847 Query: 545 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 604 |||||||||||||||||||||||||||||||||| || |||| |||||||||||||| Sbjct: 106848 ---ggaacccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgctta 106904 Query: 605 tggacccgaacctgggtgatcta 627 ||||||||||||||||||||||| Sbjct: 106905 tggacccgaacctgggtgatcta 106927
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 892 bits (450), Expect = 0.0 Identities = 587/627 (93%), Gaps = 12/627 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| ||||||||| | |||||| ||||||||||||||| ||||||| ||||| Sbjct: 86 tgaaaataagcgtagatccggag-attcccgaataggtcaacctttcaaactgc-tgctg 143 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 144 aatccatgggcaggcaagagacaacctaacgaactgaaacatcttagtagccagaggaaa 203 Query: 122 agaaagcaaaagcgattcccgtagtagc-ggcgagcgaaatgggagcagcctaaaccgtg 180 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 204 agaaagcaaaagcgattcccgtagtagcaggcgagcgaaatgggagcagcctaaaccgtg 263 Query: 181 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 240 |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 264 aaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgaagtgc 323 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 || |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 324 cgaaccctagatggctagagtccagtagccgaaagcatcactagcttacgctctgacccg 383 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 443 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 444 tactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccac 503 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 504 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcctg-g 559 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 ggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 619 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 620 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 674 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 675 cttatggacccgaacctgggtgatcta 701
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 886 bits (447), Expect = 0.0 Identities = 587/627 (93%), Gaps = 14/627 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| |||||||| |||||| ||||| Sbjct: 61 tgaaaataagcatagatccggag-attcccgaatagggcaacctttcgaactgc-tgctg 118 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 178 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 238 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 240 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 239 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 298 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 |||||| | ||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 299 tgcaccc-atatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 357 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 417 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 418 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 477 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 478 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 534 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 535 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 593 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 647 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 648 cttatggacccgaacctgggtgatcta 674
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 878 bits (443), Expect = 0.0 Identities = 585/627 (93%), Gaps = 13/627 (2%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| ||||||||| | |||||| ||||||||||||||| |||||| ||||| Sbjct: 139418 tgaaaataagcgtagatccggag-attcccgaataggtcaacctttcgaactgc-tgctg 139361 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 139360 aatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggaggaaa 139301 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139300 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 139241 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||| Sbjct: 139240 aaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgcc 139181 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 | |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 139180 gaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccga 139121 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139120 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 139061 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 139060 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtc 139001 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 139000 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccaggg 138944 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138943 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 138886 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 138885 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 138831 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 138830 cttatggacccgaacctgggtgatcta 138804 Score = 878 bits (443), Expect = 0.0 Identities = 585/627 (93%), Gaps = 13/627 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| ||||||||| | |||||| ||||||||||||||| |||||| ||||| Sbjct: 109679 tgaaaataagcgtagatccggag-attcccgaataggtcaacctttcgaactgc-tgctg 109736 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 109737 aatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggaggaaa 109796 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109797 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 109856 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||| Sbjct: 109857 aaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgcc 109916 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 | |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 109917 gaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccga 109976 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109977 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 110036 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 110037 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtc 110096 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 110097 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccaggg 110153 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110154 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 110211 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 110212 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 110266 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 110267 cttatggacccgaacctgggtgatcta 110293
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 874 bits (441), Expect = 0.0 Identities = 586/629 (93%), Gaps = 13/629 (2%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| ||||||||| | |||||| ||||||||||||||| |||||| ||||| Sbjct: 139627 tgaaaataagcgtagatccggag-attcccgaataggtcaacctttcgaactgc-tgctg 139570 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139569 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 139510 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139509 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 139450 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 240 ||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 139449 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcgaatgc 139390 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 139389 tgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccg 139330 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139329 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 139270 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 139269 tactcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 139210 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga--aag 478 ||| ||||||||||||| |||||||| | |||||||||||||||||||| || | Sbjct: 139209 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagactact 139153 Query: 479 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 538 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139152 aggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 139093 Query: 539 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 598 |||| |||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 139092 taag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcac 139038 Query: 599 tgcttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||||| Sbjct: 139037 tgcttatggacccgaacctgggtgatcta 139009 Score = 874 bits (441), Expect = 0.0 Identities = 586/629 (93%), Gaps = 13/629 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| ||||||||| | |||||| ||||||||||||||| |||||| ||||| Sbjct: 109672 tgaaaataagcgtagatccggag-attcccgaataggtcaacctttcgaactgc-tgctg 109729 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109730 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 109789 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109790 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 109849 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgc 240 ||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 109850 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcgaatgc 109909 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 109910 tgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccg 109969 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109970 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 110029 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 110030 tactcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 110089 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga--aag 478 ||| ||||||||||||| |||||||| | |||||||||||||||||||| || | Sbjct: 110090 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagactact 110146 Query: 479 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 538 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110147 aggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 110206 Query: 539 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 598 |||| |||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 110207 taag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcac 110261 Query: 599 tgcttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||||| Sbjct: 110262 tgcttatggacccgaacctgggtgatcta 110290
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 866 bits (437), Expect = 0.0 Identities = 587/629 (93%), Gaps = 15/629 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| |||||||| |||||| ||||| Sbjct: 1852 tgaaaataagcatagatccggag-attcccgaatagggcaacctttcgaactgc-tgctg 1909 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1910 aatccatgggcaggcaagagacaacctggcgaactgaaccatcttagtagccagaggaaa 1969 Query: 122 agaaagcaaaag-cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1970 agaaagcaaaaggcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 2029 Query: 181 aaaacggggttgtgggagagcaatacaagcgtt-gtgctgctaggcgaagcggtt-gagt 238 ||||||||||||||||||||||||||||||| ||||||||||||||||| | || | Sbjct: 2030 aaaacggggttgtgggagagcaatacaagcggccgtgctgctaggcgaagcagcccgaat 2089 Query: 239 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 298 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2090 gctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacc 2149 Query: 299 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2150 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 2209 Query: 359 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 418 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2210 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccc 2269 Query: 419 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 478 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || Sbjct: 2270 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccag 2326 Query: 479 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 538 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2327 gg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 2384 Query: 539 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 598 |||| |||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 2385 taag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcac 2439 Query: 599 tgcttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||||| Sbjct: 2440 tgcttatggacccgaacctgggtgatcta 2468
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 856 bits (432), Expect = 0.0 Identities = 477/493 (96%), Gaps = 13/493 (2%) Strand = Plus / Minus Query: 140 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 200 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 260 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 319 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 320 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 374 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 375 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 435 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 494 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 495 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 554 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 75067 Query: 555 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 614 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 75066 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 75007 Query: 615 cctgggtgatcta 627 ||||||||||||| Sbjct: 75006 cctgggtgatcta 74994 Score = 254 bits (128), Expect = 3e-64 Identities = 140/143 (97%), Gaps = 1/143 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 75626 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 75568 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75567 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 75508 Query: 122 agaaagcaaaagcgattcccgta 144 ||||||||||||||||||||||| Sbjct: 75507 agaaagcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 71 gcaggcaagagacaacctggcgaactgaaacatcttagta 110 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 371 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 417 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 856 bits (432), Expect = 0.0 Identities = 477/493 (96%), Gaps = 13/493 (2%) Strand = Plus / Plus Query: 140 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 200 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 260 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 319 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 320 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 374 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 375 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 435 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 494 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 495 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 554 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 382471 Query: 555 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 614 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 382472 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 382531 Query: 615 cctgggtgatcta 627 ||||||||||||| Sbjct: 382532 cctgggtgatcta 382544 Score = 254 bits (128), Expect = 3e-64 Identities = 140/143 (97%), Gaps = 1/143 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 381912 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 381970 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381971 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 382030 Query: 122 agaaagcaaaagcgattcccgta 144 ||||||||||||||||||||||| Sbjct: 382031 agaaagcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 71 gcaggcaagagacaacctggcgaactgaaacatcttagta 110 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 71 gcaggcaagagacaacctggcgaactgaaacatcttagta 110 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 371 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 417 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 371 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 417 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 856 bits (432), Expect = 0.0 Identities = 477/493 (96%), Gaps = 13/493 (2%) Strand = Plus / Minus Query: 140 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 200 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 260 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 319 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 320 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 374 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 375 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 435 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 494 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 495 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 554 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 113158 Query: 555 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 614 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 113157 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 113098 Query: 615 cctgggtgatcta 627 ||||||||||||| Sbjct: 113097 cctgggtgatcta 113085 Score = 254 bits (128), Expect = 3e-64 Identities = 140/143 (97%), Gaps = 1/143 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 113717 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 113659 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113658 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 113599 Query: 122 agaaagcaaaagcgattcccgta 144 ||||||||||||||||||||||| Sbjct: 113598 agaaagcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 71 gcaggcaagagacaacctggcgaactgaaacatcttagta 110 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 371 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 417 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 856 bits (432), Expect = 0.0 Identities = 477/493 (96%), Gaps = 13/493 (2%) Strand = Plus / Minus Query: 140 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 200 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 260 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 319 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 320 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 374 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 375 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 435 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 494 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 495 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 554 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 367840 Query: 555 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 614 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 367839 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 367780 Query: 615 cctgggtgatcta 627 ||||||||||||| Sbjct: 367779 cctgggtgatcta 367767 Score = 856 bits (432), Expect = 0.0 Identities = 477/493 (96%), Gaps = 13/493 (2%) Strand = Plus / Minus Query: 140 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 200 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 260 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 319 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 320 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 374 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 375 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 435 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 494 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 495 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 554 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 184445 Query: 555 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 614 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 184444 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 184385 Query: 615 cctgggtgatcta 627 ||||||||||||| Sbjct: 184384 cctgggtgatcta 184372 Score = 254 bits (128), Expect = 3e-64 Identities = 140/143 (97%), Gaps = 1/143 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 368399 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 368341 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368340 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 368281 Query: 122 agaaagcaaaagcgattcccgta 144 ||||||||||||||||||||||| Sbjct: 368280 agaaagcaaaagcgattcccgta 368258 Score = 254 bits (128), Expect = 3e-64 Identities = 140/143 (97%), Gaps = 1/143 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 185004 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 184946 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184945 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 184886 Query: 122 agaaagcaaaagcgattcccgta 144 ||||||||||||||||||||||| Sbjct: 184885 agaaagcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 71 gcaggcaagagacaacctggcgaactgaaacatcttagta 110 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 371 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 417 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 856 bits (432), Expect = 0.0 Identities = 582/627 (92%), Gaps = 14/627 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| |||||||| | |||||| |||||| |||||||| |||| | ||||| Sbjct: 582 tgaaaataagccgagatccggag-attcccgaatagggcaacctttcgaacttc-tgctg 639 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 640 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 699 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 700 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 759 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||| | || |||||| Sbjct: 760 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcg 819 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 | ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 820 gtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccga 879 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 880 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 939 Query: 362 actcctgggtgaccgatagcgaagtagta-ccgtgagggaaaggtgaaaagaacccccag 420 |||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| Sbjct: 940 actcctgggtgaccgatagccaaatagtacccgtgagggaaaggtgaaaagaacccccat 999 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | ||||| |||||||||||||| || || Sbjct: 1000 cggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggagacag-- 1054 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1055 -gctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 1113 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 1114 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 1168 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 1169 cttatggacccgaacctgggtgatcta 1195
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 854 bits (431), Expect = 0.0 Identities = 580/626 (92%), Gaps = 12/626 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 |||||||||||||||||||| | |||||| ||||||||||||||| |||||| ||||| Sbjct: 4317 tgaaaataagcatagatccg-aggattcccgaataggtcaacctttcgaactgc-tgctg 4374 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4375 aattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 4434 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 4435 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtga 4494 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||| ||||||||||||| | || || Sbjct: 4495 aaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaatgtt 4554 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4555 gcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 4614 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4615 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 4674 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4675 actcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtc 4734 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 4735 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagctgggg- 4790 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4791 -ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 4849 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 4850 g-----ggaaaccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgc 4904 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 4905 ttatggacccgaacctgggtgatcta 4930
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 854 bits (431), Expect = 0.0 Identities = 582/627 (92%), Gaps = 13/627 (2%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| |||||||| | |||||| ||| ||||||||||| |||||| ||||| Sbjct: 142793 tgaaaataagcgcagatccggag-attcccgaatgggtcaacctttcgaactgc-tgctg 142736 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142735 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 142676 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142675 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 142616 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgc 240 ||||||||||||||||||| |||||||||| ||||||||||||||||| | || ||||| Sbjct: 142615 aaacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgc 142556 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 142555 tgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccg 142496 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 142495 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaa 142436 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 142435 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 142376 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | ||||||||||||||||||| | || | Sbjct: 142375 cggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagccaggg 142319 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142318 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 142261 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 142260 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 142206 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 142205 cttatggacccgaacctgggtgatcta 142179 Score = 854 bits (431), Expect = 0.0 Identities = 582/627 (92%), Gaps = 13/627 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| |||||||| | |||||| ||| ||||||||||| |||||| ||||| Sbjct: 110535 tgaaaataagcgcagatccggag-attcccgaatgggtcaacctttcgaactgc-tgctg 110592 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110593 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 110652 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110653 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 110712 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgc 240 ||||||||||||||||||| |||||||||| ||||||||||||||||| | || ||||| Sbjct: 110713 aaacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgc 110772 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 110773 tgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccg 110832 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 110833 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaa 110892 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 110893 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 110952 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | ||||||||||||||||||| | || | Sbjct: 110953 cggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagccaggg 111009 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111010 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 111067 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 111068 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 111122 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 111123 cttatggacccgaacctgggtgatcta 111149
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 854 bits (431), Expect = 0.0 Identities = 580/626 (92%), Gaps = 12/626 (1%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 |||||||||||||||||||| | |||||| ||||||||||||||| |||||| ||||| Sbjct: 23608 tgaaaataagcatagatccg-aggattcccgaataggtcaacctttcgaactgc-tgctg 23551 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23550 aattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 23491 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 23490 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtga 23431 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||| ||||||||||||| | || || Sbjct: 23430 aaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaatgtt 23371 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23370 gcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 23311 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23310 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 23251 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 23250 actcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtc 23191 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 23190 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagctgggg- 23135 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23134 -ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 23076 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 23075 g-----ggaaaccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgc 23021 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 23020 ttatggacccgaacctgggtgatcta 22995
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 854 bits (431), Expect = 0.0 Identities = 581/626 (92%), Gaps = 13/626 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 |||||||||||||||||||| | |||||| ||||||||||||||| |||||| ||||| Sbjct: 4586 tgaaaataagcatagatccg-aggattcccgaataggtcaacctttcgaactgc-tgctg 4643 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4644 aattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 4703 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4704 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 4763 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||||| || || || Sbjct: 4764 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaatgtt 4823 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4824 gcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 4883 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4884 gtaacatggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 4943 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct: 4944 actcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggc 5003 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | ||||||||| |||||||||| | | | Sbjct: 5004 ggggagtgaaatagaacatgaaaccg---taagctcccaa-cagtgggaggagctgggg- 5058 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 -ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 5117 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 5118 g-----ggaaaccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgc 5172 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 5173 ttatggacccgaacctgggtgatcta 5198
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 854 bits (431), Expect = 0.0 Identities = 581/626 (92%), Gaps = 13/626 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 |||||||||||||||||||| | |||||| ||||||||||||||| |||||| ||||| Sbjct: 4586 tgaaaataagcatagatccg-aggattcccgaataggtcaacctttcgaactgc-tgctg 4643 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4644 aattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 4703 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4704 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 4763 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||||| || || || Sbjct: 4764 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaatgtt 4823 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4824 gcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 4883 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4884 gtaacatggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 4943 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct: 4944 actcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggc 5003 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | ||||||||| |||||||||| | | | Sbjct: 5004 ggggagtgaaatagaacatgaaaccg---taagctcccaa-cagtgggaggagctgggg- 5058 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 -ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 5117 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 5118 g-----ggaaaccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgc 5172 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 5173 ttatggacccgaacctgggtgatcta 5198
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 850 bits (429), Expect = 0.0 Identities = 579/626 (92%), Gaps = 10/626 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||| ||| |||||||| |||||| ||||| Sbjct: 87 tgaaaataagcatagatccggag-attcccgaatgggttaaccttttgaactgc-tgctg 144 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 aattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 204 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 205 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtga 264 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| || Sbjct: 265 aaacggggttgtgggagagcaatataagtgttgtgttgctaggcgaagcggttgagtccc 324 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||| |||||| | |||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 325 gcaccccagatggtgagagtccagtagccgaaagcatcactagcttacgctctaacccga 384 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 444 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 445 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 504 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| || Sbjct: 505 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgga 561 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 562 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaa 621 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | || ||||||||||||||||||||||||||||||| | |||| ||||||||| | Sbjct: 622 g-----gggacccaccggagccgtagcgaaagcgagtcttcctggggcaattgtcactac 676 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 677 ttatggacccgaacctgggtgatcta 702
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 841 bits (424), Expect = 0.0 Identities = 580/628 (92%), Gaps = 12/628 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||| ||||||||||||| | |||||| ||||||| |||| ||| |||||| ||||| Sbjct: 86348 tgaaaatgagcatagatccggag-attcccgaataggttaacccttttaactgc-tgctg 86405 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86406 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaat 86465 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 86466 agaaagcaaaagcgattcccgtagtagtggcgagcgaaatgggagcagcctaaaccgtga 86525 Query: 182 aaacggggttgtgggagagc--aatacaagcgttgtgctgctaggcgaagcggttgagtg 239 |||||||||||||||||||| |||| |||| |||||||||||||||||||||||||| Sbjct: 86526 aaacggggttgtgggagagcccaatataagctctgtgctgctaggcgaagcggttgagtc 86585 Query: 240 ccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc 299 | ||||||||||||| | |||||||||||||||||||||| | ||||| ||||| |||| Sbjct: 86586 ctgcaccctagatggtgagagtccagtagccgaaagcatcattggcttacgctctaaccc 86645 Query: 300 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86646 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 86705 Query: 360 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86706 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 86765 Query: 420 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 479 ||| ||||||||||||| |||||||| | |||||||||||||||||||| || Sbjct: 86766 tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaaaatta 86822 Query: 480 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 539 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 86823 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggtt 86882 Query: 540 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 599 ||| ||||||||||||||||||||||| |||||||||| || |||| ||||||||| Sbjct: 86883 aag-----ggaacccaccggagccgtagcgagagcgagtcttcatggggcaattgtcact 86937 Query: 600 gcttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||||| Sbjct: 86938 gcttatggacccgaacctgggtgatcta 86965
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 841 bits (424), Expect = 0.0 Identities = 580/628 (92%), Gaps = 12/628 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||| ||||||||||||| | |||||| ||||||| |||||||| ||||| ||||| Sbjct: 88434 tgaaaattagcatagatccggag-attcccgaataggttaacctttttcactgc-tgctg 88491 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 88492 aatccatgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagaggaat 88551 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88552 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 88611 Query: 182 aaacggggttgtgggagagca--atacaagcgttgtgctgctaggcgaagcggttgagtg 239 ||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||| Sbjct: 88612 aaacggggttgtgggagagcacaatataagctctgtgctgctaggcgaagcggttgagtc 88671 Query: 240 ccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc 299 | ||||||||||||| | |||||||||||||||||||||| | ||||| ||||| |||| Sbjct: 88672 ctgcaccctagatggtgagagtccagtagccgaaagcatcattggcttacgctctaaccc 88731 Query: 300 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88732 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 88791 Query: 360 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88792 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 88851 Query: 420 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 479 ||| ||||||||||||| |||||||| | |||||||||||||||||||| || Sbjct: 88852 tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaaaatta 88908 Query: 480 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 539 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 88909 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggtt 88968 Query: 540 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 599 ||| ||||||||||||||||||||||| |||||||||| || |||| ||||||||| Sbjct: 88969 aag-----ggaacccaccggagccgtagcgagagcgagtcttcatggggcaattgtcact 89023 Query: 600 gcttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||||| Sbjct: 89024 gcttatggacccgaacctgggtgatcta 89051
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 839 bits (423), Expect = 0.0 Identities = 578/626 (92%), Gaps = 13/626 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| |||||||| | |||||| |||||| |||||||| |||| | ||||| Sbjct: 94 tgaaaataagccgagatccggag-attcccgaatagggcaacctttcgaacttc-tgctg 151 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 152 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 211 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 271 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||| | || |||||| Sbjct: 272 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcg 331 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 | ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 332 gtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccga 391 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 451 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 452 actcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatc 511 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||| ||| |||||||| | ||||| |||||||||||||| || || Sbjct: 512 ggggagtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggagacag--- 565 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 |||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 566 gctctgaacgcgtgcctgttgaaaaatgagccggcgactcatacgcagtggcttggttaa 625 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 626 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 680 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 681 ttatggacccgaacctgggtgatcta 706
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 837 bits (422), Expect = 0.0 Identities = 583/628 (92%), Gaps = 18/628 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| |||||||| |||||| ||||| Sbjct: 186 tgaaaataagcatagatccggag-attcccgaatagggcaacctttcgaactgc-tgctg 243 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt-agccagaggaa 120 |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 244 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtgagccagaggaa 303 Query: 121 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 363 Query: 181 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag-cggttgagtg 239 |||||||| ||||||||||||||||||||||| |||||||||||||||| || || || Sbjct: 364 aaaacggg-ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagacgcccgaatg 422 Query: 240 ccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc 299 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 423 ctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgaccc 482 Query: 300 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 359 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 483 gagtagcatggggcacgtggaatcccgtgtgaatcgacaaggaccaccttgcaaggctaa 542 Query: 360 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 419 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 543 atactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-cccca 601 Query: 420 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 479 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 602 tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggcca---- 654 Query: 480 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 539 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 655 gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 714 Query: 540 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 599 ||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 715 aag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcact 769 Query: 600 gcttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||||| Sbjct: 770 gcttatggacccgaacctgggtgatcta 797
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 821 bits (414), Expect = 0.0 Identities = 429/433 (99%), Gaps = 1/433 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 85 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 143 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 203 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 204 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 263 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 323 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 324 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccga 383 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 443 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 503 Query: 422 gggtagtgaaata 434 ||||||||||||| Sbjct: 504 gggtagtgaaata 516
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 821 bits (414), Expect = 0.0 Identities = 579/629 (92%), Gaps = 13/629 (2%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| ||||||||| | | || | |||||||||||||| |||||| ||||| Sbjct: 131785 tgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctg 131727 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 131726 aatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagaggaaa 131667 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131666 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 131607 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tg 239 |||||||||||||||||||| ||||||| || ||||||||||||||||| | ||| || Sbjct: 131606 aaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatg 131547 Query: 240 ccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc 299 | |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||| Sbjct: 131546 ctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgaccc 131487 Query: 300 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131486 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 131427 Query: 360 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 419 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 131426 atactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaaccccca 131367 Query: 420 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaag 478 ||| ||||||||||||| |||||||| | |||||||||||||||||||| || | Sbjct: 131366 tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaggctcg 131310 Query: 479 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 538 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131309 gga-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 131251 Query: 539 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 598 |||| |||| ||||||||||||||||||||||||||||| | ||||| |||||||| Sbjct: 131250 taag-----ggaaaccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcac 131196 Query: 599 tgcttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||||| Sbjct: 131195 tgcttatggacccgaacctgggtgatcta 131167 Score = 821 bits (414), Expect = 0.0 Identities = 579/629 (92%), Gaps = 13/629 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| ||||||||| | | || | |||||||||||||| |||||| ||||| Sbjct: 103609 tgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctg 103667 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 103668 aatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagaggaaa 103727 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103728 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 103787 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tg 239 |||||||||||||||||||| ||||||| || ||||||||||||||||| | ||| || Sbjct: 103788 aaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatg 103847 Query: 240 ccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc 299 | |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||| Sbjct: 103848 ctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgaccc 103907 Query: 300 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103908 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 103967 Query: 360 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 419 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 103968 atactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaaccccca 104027 Query: 420 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaag 478 ||| ||||||||||||| |||||||| | |||||||||||||||||||| || | Sbjct: 104028 tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaggctcg 104084 Query: 479 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 538 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104085 gga-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 104143 Query: 539 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 598 |||| |||| ||||||||||||||||||||||||||||| | ||||| |||||||| Sbjct: 104144 taag-----ggaaaccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcac 104198 Query: 599 tgcttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||||| Sbjct: 104199 tgcttatggacccgaacctgggtgatcta 104227
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 815 bits (411), Expect = 0.0 Identities = 577/627 (92%), Gaps = 13/627 (2%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| ||||||||| |||||| ||||| Sbjct: 52600 tgaaaataagcatagatccggag-attcccgaatagggcaaccttttgaactgc-tgctg 52543 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 52542 aatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccagaggaaa 52483 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 52482 agaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcga 52423 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgc 240 |||||||||||||||||||||||| ||| || ||||||||||||||| | | |||| ||| Sbjct: 52422 aaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgc 52363 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 |||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 52362 tgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccg 52303 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52302 agtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 52243 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 52242 tactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccat 52183 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 |||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 52182 tggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 52126 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 52125 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggtta 52068 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||| |||||||||||||| || ||||||| |||||||||| Sbjct: 52067 ag-----ggaacccaccggagccatagcgaaagcgagtattcatagggcaattgtcactg 52013 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 52012 cttatggacccgaacctgggtgatcta 51986 Score = 815 bits (411), Expect = 0.0 Identities = 577/627 (92%), Gaps = 13/627 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| ||||||||| |||||| ||||| Sbjct: 37228 tgaaaataagcatagatccggag-attcccgaatagggcaaccttttgaactgc-tgctg 37285 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 37286 aatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccagaggaaa 37345 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 37346 agaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcga 37405 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgc 240 |||||||||||||||||||||||| ||| || ||||||||||||||| | | |||| ||| Sbjct: 37406 aaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgc 37465 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 |||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 37466 tgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccg 37525 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37526 agtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 37585 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 37586 tactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccat 37645 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 |||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 37646 tggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 37702 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 37703 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggtta 37760 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||| |||||||||||||| || ||||||| |||||||||| Sbjct: 37761 ag-----ggaacccaccggagccatagcgaaagcgagtattcatagggcaattgtcactg 37815 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 37816 cttatggacccgaacctgggtgatcta 37842
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 815 bits (411), Expect = 0.0 Identities = 577/627 (92%), Gaps = 13/627 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| |||||| ||||||||| |||||| ||||| Sbjct: 4156 tgaaaataagcatagatccggag-attcccgaatagggcaaccttttgaactgc-tgctg 4213 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4214 aatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccagaggaaa 4273 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 4274 agaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcga 4333 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgc 240 |||||||||||||||||||||||| ||| || ||||||||||||||| | | |||| ||| Sbjct: 4334 aaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgc 4393 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 |||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 4394 tgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccg 4453 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4454 agtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 4513 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 4514 tactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccat 4573 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 |||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 4574 tggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 4630 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4631 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggtta 4688 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||| |||||||||||||| || ||||||| |||||||||| Sbjct: 4689 ag-----ggaacccaccggagccatagcgaaagcgagtattcatagggcaattgtcactg 4743 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 4744 cttatggacccgaacctgggtgatcta 4770
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 809 bits (408), Expect = 0.0 Identities = 423/427 (99%), Gaps = 1/427 (0%) Strand = Plus / Plus Query: 4 aaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaa 63 ||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||| Sbjct: 1 aaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctgaa 59 Query: 64 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 119 Query: 124 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 179 Query: 184 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 239 Query: 244 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 303 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 240 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 299 Query: 304 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 359 Query: 364 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 419 Query: 424 gtagtga 430 ||||||| Sbjct: 420 gtagtga 426
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 801 bits (404), Expect = 0.0 Identities = 577/632 (91%), Gaps = 16/632 (2%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 |||||| |||||||||||||| | |||||| ||||||| |||||||| |||||| ||||| Sbjct: 128360 tgaaaacaagcatagatccggag-attcccgaataggttaaccttttgaactgc-tgctg 128303 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128302 aattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 128243 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 ||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct: 128242 ggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaaccgtga 128183 Query: 182 aaacggggttgtgggagagc------aatacaagcgttgtgctgctaggcgaagcggttg 235 ||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 128182 aaacggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagcggttg 128123 Query: 236 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 295 ||| |||||||||||||||| | |||||||||||||||||||||||||||| | ||||| Sbjct: 128122 agtcccgcaccctagatggcaagagtccagtagccgaaagcatcactagctcacgctcta 128063 Query: 296 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 355 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128062 acccaagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 128003 Query: 356 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 415 |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 128002 ctaaatactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaagaacc 127943 Query: 416 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 475 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| || Sbjct: 127942 cccataggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaga 127886 Query: 476 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 535 | ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| | Sbjct: 127885 attggatctctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcct 127826 Query: 536 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 595 ||||||| |||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 127825 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgt 127771 Query: 596 cactgcttatggacccgaacctgggtgatcta 627 ||||||| |||||||||||||||||||||||| Sbjct: 127770 cactgctcatggacccgaacctgggtgatcta 127739 Score = 801 bits (404), Expect = 0.0 Identities = 577/632 (91%), Gaps = 16/632 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 |||||| |||||||||||||| | |||||| ||||||| |||||||| |||||| ||||| Sbjct: 95087 tgaaaacaagcatagatccggag-attcccgaataggttaaccttttgaactgc-tgctg 95144 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95145 aattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 95204 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 ||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct: 95205 ggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaaccgtga 95264 Query: 182 aaacggggttgtgggagagc------aatacaagcgttgtgctgctaggcgaagcggttg 235 ||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 95265 aaacggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagcggttg 95324 Query: 236 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 295 ||| |||||||||||||||| | |||||||||||||||||||||||||||| | ||||| Sbjct: 95325 agtcccgcaccctagatggcaagagtccagtagccgaaagcatcactagctcacgctcta 95384 Query: 296 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 355 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95385 acccaagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 95444 Query: 356 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 415 |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 95445 ctaaatactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaagaacc 95504 Query: 416 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 475 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| || Sbjct: 95505 cccataggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaga 95561 Query: 476 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 535 | ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| | Sbjct: 95562 attggatctctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcct 95621 Query: 536 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 595 ||||||| |||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 95622 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgt 95676 Query: 596 cactgcttatggacccgaacctgggtgatcta 627 ||||||| |||||||||||||||||||||||| Sbjct: 95677 cactgctcatggacccgaacctgggtgatcta 95708
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 787 bits (397), Expect = 0.0 Identities = 572/626 (91%), Gaps = 11/626 (1%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 |||||||||| |||||||||| | |||||| ||||||| ||||||| ||||||| ||||| Sbjct: 116123 tgaaaataagtatagatccggag-attcccgaataggttaacctttgaaactgc-tgctg 116066 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 ||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116065 aattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 116006 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 116005 agaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaaccgtga 115946 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||| ||||||| |||| | | ||| |||||| ||||||||||||| ||||||| | Sbjct: 115945 aaacggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgagtcct 115887 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||| ||||||||||| ||||||||| |||||||||| ||||| |||||| Sbjct: 115886 gcaccctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaacccga 115827 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 115826 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaat 115767 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115766 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 115707 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| ||||||||| |||||||||||||||||||| ||| | Sbjct: 115706 ggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagaattgaa 115650 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 115649 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaa 115590 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||| | ||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 115589 gggagc-----ccaccggagccgtagcgaaagcgagtcttcttagggcaattgtcactgc 115535 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 115534 ttatggacccgaacctgggtgatcta 115509 Score = 787 bits (397), Expect = 0.0 Identities = 572/626 (91%), Gaps = 11/626 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 |||||||||| |||||||||| | |||||| ||||||| ||||||| ||||||| ||||| Sbjct: 85997 tgaaaataagtatagatccggag-attcccgaataggttaacctttgaaactgc-tgctg 86054 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 ||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86055 aattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 86114 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 86115 agaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaaccgtga 86174 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||| ||||||| |||| | | ||| |||||| ||||||||||||| ||||||| | Sbjct: 86175 aaacggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgagtcct 86233 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||| ||||||||||| ||||||||| |||||||||| ||||| |||||| Sbjct: 86234 gcaccctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaacccga 86293 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 86294 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaat 86353 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86354 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 86413 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| ||||||||| |||||||||||||||||||| ||| | Sbjct: 86414 ggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagaattgaa 86470 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 86471 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaa 86530 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 |||| | ||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 86531 gggagc-----ccaccggagccgtagcgaaagcgagtcttcttagggcaattgtcactgc 86585 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 86586 ttatggacccgaacctgggtgatcta 86611
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 785 bits (396), Expect = 0.0 Identities = 499/530 (94%), Gaps = 10/530 (1%) Strand = Plus / Minus Query: 99 aacatcttagtagccagaggaaaagaaag-caaaagcgattcccgtagtagcggcgagcg 157 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 564 aacatcttagtagccagaggaaaagaaaggcaaaagcgattcccgtagtagcggcgagcg 505 Query: 158 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgc 217 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 504 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcgatacaagcgtcgtgc 445 Query: 218 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 277 |||||||||||||||| |||||| |||||||||||||| | ||||||||||||||||||| Sbjct: 444 tgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagca 385 Query: 278 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 337 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 tcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 325 Query: 338 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 265 Query: 398 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 457 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 264 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 208 Query: 458 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 517 ||||||||||||||| | | | ||||||||||||||||||||||||||||||||||| Sbjct: 207 ccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcg 149 Query: 518 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 577 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 148 actcataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgag 94 Query: 578 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatcta 627 |||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 93 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatcta 44
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 779 bits (393), Expect = 0.0 Identities = 570/626 (91%), Gaps = 10/626 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||| ||||||| | |||||| ||||||| |||||||| |||||| ||||| Sbjct: 87 tgaaaataagcatggatccggag-attcccgaataggttaaccttttgaactgc-tgctg 144 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 ||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 aattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 204 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct: 205 agaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagtagcctaaaccgtga 264 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||| |||||| | |||||||| |||||||||||| ||||| | | Sbjct: 265 aaacggggttgtgggggagcaaagtaggcgttgtgtcgctaggcgaagcagttgaatcct 324 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||| ||||||| | |||||||||||||||||||||||||| ||||||||| |||||| Sbjct: 325 gcaccatagatggtgagagtccagtagccgaaagcatcactagtttatgctctaacccga 384 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 385 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaat 444 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 445 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccata 504 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| | Sbjct: 505 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaa 561 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 562 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaa 621 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||||||||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 622 g-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactac 676 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 677 ttatggacccgaacctgggtgatcta 702
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 773 bits (390), Expect = 0.0 Identities = 571/627 (91%), Gaps = 11/627 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||||||| |||||||| |||||| ||||| Sbjct: 2130 tgaaaataagcatagatccggag-attcccgaataggttaaccttttgaactgc-tgctg 2187 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2188 aattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 2247 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 2248 agaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtga 2307 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| | Sbjct: 2308 aaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcct 2367 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccg 300 ||||||||||||| | |||||||||||||||||||| || | || ||||||| ||||| Sbjct: 2368 gcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccg 2427 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2428 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaa 2487 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2488 tactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccat 2547 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 2548 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcga 2604 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 2605 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 2664 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 2665 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcacta 2719 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 2720 cttatggacccgaacctgggtgatcta 2746
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 773 bits (390), Expect = 0.0 Identities = 571/627 (91%), Gaps = 11/627 (1%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||||||| |||||||| |||||| ||||| Sbjct: 118063 tgaaaataagcatagatccggag-attcccgaataggttaaccttttgaactgc-tgctg 118006 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118005 aattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 117946 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 117945 agaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtga 117886 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| | Sbjct: 117885 aaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcct 117826 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccg 300 ||||||||||||| | |||||||||||||||||||| || | || ||||||| ||||| Sbjct: 117825 gcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccg 117766 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 117765 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaa 117706 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 117705 tactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccat 117646 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 117645 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcga 117589 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 117588 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 117529 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 117528 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcacta 117474 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 117473 cttatggacccgaacctgggtgatcta 117447 Score = 773 bits (390), Expect = 0.0 Identities = 571/627 (91%), Gaps = 11/627 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||||||| |||||||| |||||| ||||| Sbjct: 90039 tgaaaataagcatagatccggag-attcccgaataggttaaccttttgaactgc-tgctg 90096 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90097 aattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 90156 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 90157 agaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtga 90216 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| | Sbjct: 90217 aaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcct 90276 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccg 300 ||||||||||||| | |||||||||||||||||||| || | || ||||||| ||||| Sbjct: 90277 gcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccg 90336 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 90337 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaa 90396 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 90397 tactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccat 90456 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 90457 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcga 90513 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 90514 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 90573 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 90574 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcacta 90628 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 90629 cttatggacccgaacctgggtgatcta 90655
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 765 bits (386), Expect = 0.0 Identities = 570/627 (90%), Gaps = 11/627 (1%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||| ||||| ||||||| | |||||| ||||||| |||||||| |||| | ||||| Sbjct: 146473 tgaaaatgagcatggatccggag-attcccgaataggttaaccttttgaactac-tgctg 146416 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 ||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146415 aattcataggcaggcgagagacaacctggcgaactgaaacatcttagtagccagaggaag 146356 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 146355 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtga 146296 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| | Sbjct: 146295 aaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgagtcct 146236 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctgacccg 300 | ||||||||||| | |||||||||||||||||||||||| || |||||||| ||||| Sbjct: 146235 gtaccctagatggtgagagtccagtagccgaaagcatcactggctttatgctccaacccg 146176 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 146175 agtagcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaa 146116 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 146115 tactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgt 146056 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | ||||||||||||||||||| ||| | Sbjct: 146055 cggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagaatcgg 145999 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 ||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 145998 atccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 145939 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 145938 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactg 145884 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 145883 cttatggacccgaacctgggtgatcta 145857 Score = 765 bits (386), Expect = 0.0 Identities = 570/627 (90%), Gaps = 11/627 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||| ||||| ||||||| | |||||| ||||||| |||||||| |||| | ||||| Sbjct: 111989 tgaaaatgagcatggatccggag-attcccgaataggttaaccttttgaactac-tgctg 112046 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 ||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112047 aattcataggcaggcgagagacaacctggcgaactgaaacatcttagtagccagaggaag 112106 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 112107 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtga 112166 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| | Sbjct: 112167 aaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgagtcct 112226 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctgacccg 300 | ||||||||||| | |||||||||||||||||||||||| || |||||||| ||||| Sbjct: 112227 gtaccctagatggtgagagtccagtagccgaaagcatcactggctttatgctccaacccg 112286 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 112287 agtagcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaa 112346 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 112347 tactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgt 112406 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | ||||||||||||||||||| ||| | Sbjct: 112407 cggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagaatcgg 112463 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 ||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 112464 atccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 112523 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 112524 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactg 112578 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 112579 cttatggacccgaacctgggtgatcta 112605
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 765 bits (386), Expect = 0.0 Identities = 569/626 (90%), Gaps = 7/626 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 |||||||||| |||||||||| | |||||| ||||||| ||||||||||||||| ||||| Sbjct: 70 tgaaaataagtatagatccggag-attcccgaataggttaaccttttaaactgc-tgctg 127 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 ||||||| || |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 128 aatccataggcgggcaagagacaacctggcgaactgaaacatcttagtagccggaggaag 187 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 188 agaaagcaaaagcgattctcgtagtagcggcgagcgaaacgggagcagcctaaaccgtga 247 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||| |||| | | |||| |||| ||||||||||||| ||||||| | Sbjct: 248 aaacggggttgtgggggagctaaagaagcattgtattgctaggcgaagcagttgagtcct 307 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||| | ||||||||| |||||||||| || ||||| ||||| |||||| Sbjct: 308 gcaccctagatggtgagagtccagtaaccgaaagcattacaagcttgggctctaacccga 367 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 gtaacatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 427 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 487 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| |||||||| | |||| ||||||||||||||| ||| || Sbjct: 488 ggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggagaatcgga 544 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 545 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaa 604 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 ||||| | | ||||||||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 605 gggaaag--aaccaccggagccatagcgaaagcgagtcttcccagggcaattgtcactgc 662 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 663 ttatggacccgaacctgggtgatcta 688
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 763 bits (385), Expect = 0.0 Identities = 568/626 (90%), Gaps = 10/626 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 |||||| |||||||||||||| | |||||| ||||||| |||||||| |||||| ||||| Sbjct: 3976 tgaaaagaagcatagatccggag-attcccgaataggttaaccttttgaactgc-tgctg 4033 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 ||| || || | |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4034 aattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaag 4093 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 4094 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtga 4153 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | Sbjct: 4154 aaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttct 4213 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||| |||||| | ||||||||||||||||||| |||| |||| || | |||||| Sbjct: 4214 gcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccga 4273 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4274 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 4333 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4334 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 4393 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| ||||| || | |||| |||||||||| |||| ||| || Sbjct: 4394 ggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcgga 4450 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 4451 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaa 4510 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||| |||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 4511 g-----ggaattcaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgc 4565 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 4566 ttatggacccgaacctgggtgatcta 4591
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 763 bits (385), Expect = 0.0 Identities = 568/626 (90%), Gaps = 10/626 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 |||||| |||||||||||||| | |||||| ||||||| |||||||| |||||| ||||| Sbjct: 86 tgaaaagaagcatagatccggag-attcccgaataggttaaccttttgaactgc-tgctg 143 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 ||| || || | |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 144 aattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaag 203 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 204 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtga 263 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | Sbjct: 264 aaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttct 323 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||| |||||| | ||||||||||||||||||| |||| |||| || | |||||| Sbjct: 324 gcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccga 383 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 443 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 503 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| ||||| || | |||| |||||||||| |||| ||| || Sbjct: 504 ggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcgga 560 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 561 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaa 620 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||| |||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 621 g-----ggaattcaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgc 675 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 676 ttatggacccgaacctgggtgatcta 701
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 763 bits (385), Expect = 0.0 Identities = 568/626 (90%), Gaps = 10/626 (1%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 |||||| |||||||||||||| | |||||| ||||||| |||||||| |||||| ||||| Sbjct: 151159 tgaaaagaagcatagatccggag-attcccgaataggttaaccttttgaactgc-tgctg 151102 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 ||| || || | |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151101 aattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaag 151042 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 151041 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtga 150982 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | Sbjct: 150981 aaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttct 150922 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||| |||||| | ||||||||||||||||||| |||| |||| || | |||||| Sbjct: 150921 gcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccga 150862 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150861 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 150802 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150801 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 150742 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| ||||| || | |||| |||||||||| |||| ||| || Sbjct: 150741 ggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcgga 150685 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 150684 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaa 150625 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||| |||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 150624 g-----ggaattcaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgc 150570 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 150569 ttatggacccgaacctgggtgatcta 150544 Score = 763 bits (385), Expect = 0.0 Identities = 568/626 (90%), Gaps = 10/626 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 |||||| |||||||||||||| | |||||| ||||||| |||||||| |||||| ||||| Sbjct: 117507 tgaaaagaagcatagatccggag-attcccgaataggttaaccttttgaactgc-tgctg 117564 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 ||| || || | |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 117565 aattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaag 117624 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 117625 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtga 117684 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | Sbjct: 117685 aaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttct 117744 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||| |||||| | ||||||||||||||||||| |||| |||| || | |||||| Sbjct: 117745 gcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccga 117804 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117805 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 117864 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117865 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 117924 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| ||||| || | |||| |||||||||| |||| ||| || Sbjct: 117925 ggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcgga 117981 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 117982 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaa 118041 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||| |||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 118042 g-----ggaattcaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgc 118096 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 118097 ttatggacccgaacctgggtgatcta 118122
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 763 bits (385), Expect = 0.0 Identities = 568/626 (90%), Gaps = 10/626 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 |||||| |||||||||||||| | |||||| ||||||| |||||||| |||||| ||||| Sbjct: 86 tgaaaagaagcatagatccggag-attcccgaataggttaaccttttgaactgc-tgctg 143 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 ||| || || | |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 144 aattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaag 203 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 204 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtga 263 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | Sbjct: 264 aaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttct 323 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||| |||||| | ||||||||||||||||||| |||| |||| || | |||||| Sbjct: 324 gcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccga 383 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 443 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 503 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||||||||| ||||| || | |||| |||||||||| |||| ||| || Sbjct: 504 ggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcgga 560 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 561 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaa 620 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 | |||| |||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 621 g-----ggaattcaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgc 675 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 676 ttatggacccgaacctgggtgatcta 701
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 761 bits (384), Expect = 0.0 Identities = 571/630 (90%), Gaps = 14/630 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 |||||||||| || ||||||| | |||||| ||||||| ||||||||||||||| ||||| Sbjct: 87 tgaaaataagtatggatccggag-attcccgaataggttaaccttttaaactgc-tgctg 144 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 ||| ||| || |||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 145 aattcataggcgggcaagagacaacccggcgaactgaaacatcttagtagccggaggaaa 204 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 205 agaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggagcggcctaaaccgtga 264 Query: 182 aaacggggttgtgggagagcaatacaa----gcgttgtgctgctaggcgaagcggttgag 237 ||||||||||||||| |||| |||||| || ||| ||||||||||||||| |||||| Sbjct: 265 aaacggggttgtgggggagctatacaaataagcattgcgctgctaggcgaagcagttgag 324 Query: 238 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 297 | | |||||| |||||| | ||||||||| |||||||||| || | |||||||||| || Sbjct: 325 tcctgcaccccagatggtgagagtccagtaaccgaaagcataacaatcttatgctctaac 384 Query: 298 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 444 Query: 358 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 445 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 504 Query: 418 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 477 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 505 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaat 561 Query: 478 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 537 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 562 cggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctgg 621 Query: 538 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 597 ||||| ||||||||||||||||||||||||||| |||||| | |||| ||||||| Sbjct: 622 ttaag-----ggaacccaccggagccgtagcgaaagcaagtcttcctggggcaattgtca 676 Query: 598 ctgcttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||||||| Sbjct: 677 ctgcttatggacccgaacctgggtgatcta 706
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 755 bits (381), Expect = 0.0 Identities = 462/486 (95%), Gaps = 6/486 (1%) Strand = Plus / Plus Query: 56 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 115 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 116 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 176 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 234 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 235 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 294 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 295 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 355 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 414 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 415 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 474 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 377 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 433 Query: 475 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 534 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 491 Query: 535 tggtta 540 |||||| Sbjct: 492 tggtta 497
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 753 bits (380), Expect = 0.0 Identities = 483/513 (94%), Gaps = 7/513 (1%) Strand = Plus / Minus Query: 26 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 85 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 507 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 449 Query: 86 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 389 Query: 146 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 329 Query: 206 caagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtcca 264 ||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||| Sbjct: 328 caagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtcca 269 Query: 265 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 209 Query: 325 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 384 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 208 cgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgatagcgaa 149 Query: 385 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 444 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 148 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 89 Query: 445 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 504 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 88 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 34 Query: 505 gaatgagccggcgactcataggcagtggcttgg 537 ||||||||||||||||||||||||||||||||| Sbjct: 33 gaatgagccggcgactcataggcagtggcttgg 1
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 733 bits (370), Expect = 0.0 Identities = 448/471 (95%), Gaps = 5/471 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||||||||||||||| |||||| ||||| Sbjct: 46338 tgaaaataagcatagatccggag-attcccgaataggtcaacctttcgaactgc-tgctg 46395 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 46396 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccagaggaaa 46455 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 46456 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtga 46515 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| || Sbjct: 46516 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtacc 46575 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46576 gcaccctagatggctagagtccagtagccgaaagcatcactagcttatgctctgacccga 46635 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46636 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 46695 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 46696 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 46755 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 472 ||| ||||||||||||| |||||||| | ||||| |||||||||||||| Sbjct: 46756 ggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggagg 46803 Score = 232 bits (117), Expect = 1e-57 Identities = 138/145 (95%), Gaps = 5/145 (3%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 543 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 602 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 46878 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 46932 Query: 603 tatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||| Sbjct: 46933 tatggacccgaacctgggtgatcta 46957
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 733 bits (370), Expect = 0.0 Identities = 448/471 (95%), Gaps = 5/471 (1%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||||||||||||||| |||| | ||||| Sbjct: 130449 tgaaaataagcatagatccggag-attcccgaataggtcaacctttcgaactac-tgctg 130392 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130391 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 130332 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130331 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 130272 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||| Sbjct: 130271 aaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagtgcc 130212 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130211 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccga 130152 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130151 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 130092 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 130091 actcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatc 130032 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 472 ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 130031 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 129984 Score = 733 bits (370), Expect = 0.0 Identities = 448/471 (95%), Gaps = 5/471 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||| ||||||||||||||| |||| | ||||| Sbjct: 102007 tgaaaataagcatagatccggag-attcccgaataggtcaacctttcgaactac-tgctg 102064 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102065 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 102124 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102125 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 102184 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||| Sbjct: 102185 aaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagtgcc 102244 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102245 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccga 102304 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102305 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 102364 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 102365 actcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatc 102424 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 472 ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 102425 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 102472 Score = 216 bits (109), Expect = 7e-53 Identities = 136/145 (93%), Gaps = 5/145 (3%) Strand = Plus / Minus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 543 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 602 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 129909 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 129855 Query: 603 tatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||| Sbjct: 129854 tatggacccgaacctgggtgatcta 129830 Score = 216 bits (109), Expect = 7e-53 Identities = 136/145 (93%), Gaps = 5/145 (3%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 543 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 602 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 102547 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 102601 Query: 603 tatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||| Sbjct: 102602 tatggacccgaacctgggtgatcta 102626
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 726 bits (366), Expect = 0.0 Identities = 372/374 (99%) Strand = Plus / Plus Query: 254 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 313 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 314 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 374 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 434 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 494 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 300 Query: 554 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 613 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 301 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccga 360 Query: 614 acctgggtgatcta 627 |||||||||||||| Sbjct: 361 acctgggtgatcta 374
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 718 bits (362), Expect = 0.0 Identities = 446/471 (94%), Gaps = 5/471 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| ||||||||| | |||||| ||||||||||||||| ||||||| ||||| Sbjct: 94 tgaaaataagcgtagatccggag-attcccgaataggtcaacctttcaaactgc-tgctg 151 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 152 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaa 211 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 271 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 272 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgct 331 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 332 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccga 391 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 451 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 452 actcctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccccatc 511 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 472 ||| ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 512 ggggagtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%), Gaps = 5/111 (4%) Strand = Plus / Plus Query: 517 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 576 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 577 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatcta 627 ||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatcta 697
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 718 bits (362), Expect = 0.0 Identities = 446/471 (94%), Gaps = 5/471 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| ||||||||| | |||||| ||||||||||||||| ||||||| ||||| Sbjct: 94 tgaaaataagcgtagatccggag-attcccgaataggtcaacctttcaaactgc-tgctg 151 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 152 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaa 211 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 271 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 272 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgct 331 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 332 gcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccga 391 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 451 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 452 actcctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccccatc 511 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 472 || ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 512 cgggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 200 bits (101), Expect = 4e-48 Identities = 134/145 (92%), Gaps = 5/145 (3%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 543 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 602 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 641 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 603 tatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||| Sbjct: 696 tatggacccgaacctgggtgatcta 720
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 718 bits (362), Expect = 0.0 Identities = 446/471 (94%), Gaps = 5/471 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| ||||||||| | |||||| ||||||||||||||| ||||||| ||||| Sbjct: 94 tgaaaataagcgtagatccggag-attcccgaataggtcaacctttcaaactgc-tgctg 151 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 152 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaa 211 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 271 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 272 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgct 331 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | ||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 332 gcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgacccga 391 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 451 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 452 actcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatc 511 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 472 ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 512 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 178 bits (90), Expect = 1e-41 Identities = 134/146 (91%), Gaps = 7/146 (4%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 543 ggaacggaacccaccgga-gccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 ||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||||||||||||||| Sbjct: 695 ttatggacccgaacctgggtgatcta 720
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 710 bits (358), Expect = 0.0 Identities = 445/471 (94%), Gaps = 5/471 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| ||||||||| | |||||| ||||||||||||||| ||||||| ||||| Sbjct: 94 tgaaaataagcgtagatccggag-attcccgaataggtcaacctttcaaactgc-tgctg 151 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 152 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaa 211 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 271 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 272 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgct 331 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | ||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 332 gcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgacccga 391 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 451 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 452 actcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatc 511 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 472 || ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 512 cgggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 167 bits (84), Expect = 5e-38 Identities = 131/145 (90%), Gaps = 5/145 (3%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 543 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 602 || ||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 gg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 603 tatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||| Sbjct: 696 tatggacccgaacctgggtgatcta 720
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 710 bits (358), Expect = 0.0 Identities = 445/471 (94%), Gaps = 5/471 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| ||||||||| | |||||| ||||||||||||||| ||||||| ||||| Sbjct: 94 tgaaaataagcgtagatccggag-attcccgaataggtcaacctttcaaactgc-tgctg 151 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 152 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaa 211 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 271 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 272 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgct 331 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | ||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 332 gcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgacccga 391 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 451 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 452 actcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatc 511 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 472 ||| ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 512 ggggagtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 168 bits (85), Expect = 1e-38 Identities = 131/145 (90%), Gaps = 6/145 (4%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 543 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 602 ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 ggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 694 Query: 603 tatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||| Sbjct: 695 tatggacccgaacctgggtgatcta 719
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 696 bits (351), Expect = 0.0 Identities = 474/510 (92%), Gaps = 8/510 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| ||||||||| | |||||| ||||||||||||||| |||||| ||||| Sbjct: 135 tgaaaataagcgtagatccggag-attcccgaataggtcaacctttcgaactgc-tgctg 192 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 193 aatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggaggaaa 252 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 312 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||| Sbjct: 313 aaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgcc 372 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 | |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 373 gaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccga 432 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 492 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 493 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtc 552 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtg 480 ||| ||||||||||||| |||||||| | ||||||||||||| |||||| | || | Sbjct: 553 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagngggaggagcccaggg 609 Query: 481 atctctgaccgcgtgcctgttgaagaatga 510 |||||||||||||||||||||||||||| Sbjct: 610 --ctctgaccgcgtgcctgttgaagaatga 637
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 690 bits (348), Expect = 0.0 Identities = 363/367 (98%), Gaps = 1/367 (0%) Strand = Plus / Plus Query: 13 atagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 72 |||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 atagatccggag-attcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 59 Query: 73 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 119 Query: 133 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 179 Query: 193 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 239 Query: 253 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 312 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 240 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 299 Query: 313 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 359 Query: 373 accgata 379 ||||||| Sbjct: 360 accgata 366
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 688 bits (347), Expect = 0.0 Identities = 562/627 (89%), Gaps = 14/627 (2%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 |||||||||||||||||||| | |||||| ||| || ||||||| | ||||| |||| Sbjct: 86 tgaaaataagcatagatccgtag-attcccgaatggggtaacctttcacactgc-tgctc 143 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144 aatccatgggcaggaaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 203 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 | |||||||||||||||||| ||||||||||||||||||||||| |||||||||||| || Sbjct: 204 ataaagcaaaagcgattcccatagtagcggcgagcgaaatgggatcagcctaaaccgcga 263 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgc 240 |||||||||||||||||||||||| |||||| ||||||||||||||||| | || | || Sbjct: 264 aaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcagcttaaatga 323 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 |||||||||||||| |||||||||||| | |||||||||||| || ||||||||||| Sbjct: 324 tgcaccctagatggcgaaagtccagtagtcaaaagcatcactacgttgcgctctgacccg 383 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 agtagcatgggacacgtgtaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 443 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||| ||| |||| ||||||||||||||||||| ||||||||||| ||||| Sbjct: 444 tactcctgggtaaccaatagtaaagtagtaccgtgagggaagggtgaaaagaa-ccccat 502 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 |||| ||||||||||||| |||||||| | |||| ||||||||||||||| | || | Sbjct: 503 tggggagtgaaatagaacatgaaaccg---taagctaccaagcagtgggaggagccaggg 559 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 560 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggtta 617 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||||||||||||||| |||||||||||||| || ||||| | |||||||||| Sbjct: 618 ag-----ggaacccaccggagccatagcgaaagcgagtattcataggactattgtcactg 672 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||||| Sbjct: 673 cttatggacccgaacctgggtgatcta 699
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 658 bits (332), Expect = 0.0 Identities = 444/477 (93%), Gaps = 6/477 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| |||||||| | |||||| |||||| |||||||| |||| | ||||| Sbjct: 94 tgaaaataagccgagatccggag-attcccgaatagggcaacctttcgaacttc-tgctg 151 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 152 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 211 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 271 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||| | || |||||| Sbjct: 272 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcg 331 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 | ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 332 gtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccga 391 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 451 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 452 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-ccccatc 510 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 478 ||| ||||||||| ||| |||||||| | ||||| |||||||||||||| ||||| Sbjct: 511 ggggagtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggagaaag 564 Score = 143 bits (72), Expect = 8e-31 Identities = 78/80 (97%) Strand = Plus / Plus Query: 548 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 607 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 608 acccgaacctgggtgatcta 627 |||||||||||||||||||| Sbjct: 662 acccgaacctgggtgatcta 681
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 632 bits (319), Expect = e-178 Identities = 396/417 (94%), Gaps = 5/417 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| ||||||||| | |||||| ||||||||||||||| ||||||| ||||| Sbjct: 83 tgaaaataagcgtagatccggag-attcccgaataggtcaacctttcaaactgc-tgctg 140 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 200 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 260 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| |||||||||||||||||||| || | | Sbjct: 261 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggaatact 320 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 321 gcaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccga 380 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 440 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 418 ||| | |||||||||||| |||||||||||||||||||| |||| ||||||||||| Sbjct: 441 actac--ggtgaccgatagtgaagtagtaccgtgagggaagggtg-aaagaaccccc 494 Score = 115 bits (58), Expect = 2e-22 Identities = 87/95 (91%), Gaps = 5/95 (5%) Strand = Plus / Plus Query: 523 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 581 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 582 aatagggcgattgtcactgcttatggacccgaacc 616 ||||||| |||||||||||||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggacccgaacc 703
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 626 bits (316), Expect = e-176 Identities = 322/324 (99%) Strand = Plus / Plus Query: 304 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 364 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 424 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 483 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 484 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 240 Query: 544 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 603 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 241 gaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 300 Query: 604 atggacccgaacctgggtgatcta 627 |||||||||||||||||||||||| Sbjct: 301 atggacccgaacctgggtgatcta 324
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 626 bits (316), Expect = e-176 Identities = 386/407 (94%), Gaps = 2/407 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| ||||||||| | |||||| ||||||||||||||| ||||||| ||| | Sbjct: 63 tgaaaataagcgtagatccggag-attcccgaataggtcaacctttcaaactgc-tgccg 120 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 121 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaa 180 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 240 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 ||||||||||||||||||||||||||||||| ||||||||||||||||||| || || Sbjct: 241 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggccgaacacc 300 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 301 gcaccctagatggtgggagtccagtagccgaaagcatcactagcttacgctctgacccga 360 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 420 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 408 |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 421 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaa 467
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 603 bits (304), Expect = e-169 Identities = 307/308 (99%) Strand = Plus / Plus Query: 320 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 380 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 440 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 500 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 240 Query: 560 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 619 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 241 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 300 Query: 620 gtgatcta 627 |||||||| Sbjct: 301 gtgatcta 308
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 587 bits (296), Expect = e-164 Identities = 311/315 (98%), Gaps = 2/315 (0%) Strand = Plus / Minus Query: 315 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 375 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 435 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 495 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacggaac 552 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 122581 Query: 553 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 612 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122580 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 122521 Query: 613 aacctgggtgatcta 627 ||||||||||||||| Sbjct: 122520 aacctgggtgatcta 122506 Score = 585 bits (295), Expect = e-164 Identities = 316/322 (98%), Gaps = 1/322 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||| ||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 123384 tgaaattaagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 123326 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123325 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 123266 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123265 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 123206 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123205 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 123146 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 123145 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgccccga 123086 Query: 302 gtagcatggggcacgtggaatc 323 |||||||||||||||||||||| Sbjct: 123085 gtagcatggggcacgtggaatc 123064
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 587 bits (296), Expect = e-164 Identities = 311/315 (98%), Gaps = 2/315 (0%) Strand = Plus / Minus Query: 315 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 375 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 435 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 495 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacggaac 552 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 12825122 Query: 553 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 612 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 12825121 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 12825062 Query: 613 aacctgggtgatcta 627 ||||||||||||||| Sbjct: 12825061 aacctgggtgatcta 12825047 Score = 585 bits (295), Expect = e-164 Identities = 316/322 (98%), Gaps = 1/322 (0%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||| ||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 12825925 tgaaattaagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 12825867 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825866 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 12825807 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825806 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 12825747 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825746 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 12825687 Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 12825686 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgccccga 12825627 Query: 302 gtagcatggggcacgtggaatc 323 |||||||||||||||||||||| Sbjct: 12825626 gtagcatggggcacgtggaatc 12825605 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 260 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 319 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 41 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 100 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 101 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 161 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 220 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 221 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 280 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 281 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 340 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 341 gaccaccttgcaaggctaaatactcctgggtg 372 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 527 bits (266), Expect = e-146 Identities = 404/448 (90%), Gaps = 9/448 (2%) Strand = Plus / Minus Query: 181 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 240 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 300 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggcttggtta 5928 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || || |||||||||||||||||||| |||||||||| ||||||| |||||||||| Sbjct: 5927 ag-----ggcacccaccggagccgtagcgagagcgagtcttcatagggcaattgtcactg 5873 Query: 601 c-ttatggacccgaacctgggtgatcta 627 | |||||||||||||||||||||||||| Sbjct: 5872 ctttatggacccgaacctgggtgatcta 5845 Score = 218 bits (110), Expect = 2e-53 Identities = 156/169 (92%), Gaps = 2/169 (1%) Strand = Plus / Minus Query: 11 gcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaatccatga 70 |||||||||||| | |||||| ||||||| |||||||| |||||| ||||||||||||| Sbjct: 6481 gcatagatccggag-attcccgaataggttaaccttttgaactgc-tgctgaatccatgg 6424 Query: 71 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 130 ||||| ||| | |||||||| ||||||||||||||||||| ||||||||| ||||||||| Sbjct: 6423 gcaggtaaggggcaacctggtgaactgaaacatcttagtaaccagaggaagagaaagcaa 6364 Query: 131 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 179 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6363 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 6315
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 513 bits (259), Expect = e-142 Identities = 485/558 (86%), Gaps = 13/558 (2%) Strand = Plus / Minus Query: 74 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 133 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 139114 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 139055 Query: 134 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 193 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 139054 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 138995 Query: 194 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 249 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 138994 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 138936 Query: 250 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 309 || || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 138935 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 138876 Query: 310 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 369 ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||| Sbjct: 138875 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 138816 Query: 370 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 429 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 138815 gtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 138756 Query: 430 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 489 ||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||||| Sbjct: 138755 aaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgac 138699 Query: 490 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 549 ||||||||||||||||||||||||||||||| |||||| | ||| |||||||| || Sbjct: 138698 cgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggttaag-----gg 138644 Query: 550 aacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggac 609 |||||||||||||||||||||||||||||||| ||||| | |||| |||||||||||| Sbjct: 138643 aacccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatggac 138584 Query: 610 ccgaacctgggtgatcta 627 ||||||| |||||||||| Sbjct: 138583 ccgaacccgggtgatcta 138566 Score = 513 bits (259), Expect = e-142 Identities = 485/558 (86%), Gaps = 13/558 (2%) Strand = Plus / Plus Query: 74 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 133 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 82763 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 82822 Query: 134 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 193 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 82823 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 82882 Query: 194 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 249 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 82883 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 82941 Query: 250 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 309 || || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 82942 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 83001 Query: 310 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 369 ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||| Sbjct: 83002 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 83061 Query: 370 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 429 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 83062 gtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 83121 Query: 430 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 489 ||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||||| Sbjct: 83122 aaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgac 83178 Query: 490 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 549 ||||||||||||||||||||||||||||||| |||||| | ||| |||||||| || Sbjct: 83179 cgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggttaag-----gg 83233 Query: 550 aacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggac 609 |||||||||||||||||||||||||||||||| ||||| | |||| |||||||||||| Sbjct: 83234 aacccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatggac 83293 Query: 610 ccgaacctgggtgatcta 627 ||||||| |||||||||| Sbjct: 83294 ccgaacccgggtgatcta 83311
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 507 bits (256), Expect = e-140 Identities = 536/625 (85%), Gaps = 6/625 (0%) Strand = Plus / Plus Query: 3 gaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctga 62 ||||||| | |||||||||| | |||||| ||||||| |||||| |||||||||||||| Sbjct: 144006 gaaaataggtatagatccggag-attcccgaataggttaaccttccaaactgcctgctga 144064 Query: 63 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 122 || || ||||| |||||||||||| ||||||||||||||||||||||||| ||||| | Sbjct: 144065 attcagaagcagacaagagacaacccggcgaactgaaacatcttagtagccggaggagga 144124 Query: 123 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 182 |||||||||||||||||| ||||| ||||||| |||| |||| ||||||||||||||| Sbjct: 144125 aaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaaccgtgaa 144184 Query: 183 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 242 ||||||||||||||||| || || | || | ||||||||||| ||||||||| | Sbjct: 144185 gacggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgagtgctg 144244 Query: 243 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 302 ||||| |||||| | ||||||||||||| ||| | |||||| | |||| |||| || Sbjct: 144245 caccccagatggtgatagtccagtagccggaagtacagctagctcacgctccaacccaag 144304 Query: 303 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 362 |||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 144305 tagcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaata 144364 Query: 363 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 422 ||||| |||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 144365 ttcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcg 144424 Query: 423 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 482 || ||||||||||||| |||||||| ||||||||||||||||||||| ||| | ||| Sbjct: 144425 gggagtgaaatagaacatgaaaccg---cgagctcccaagcagtgggaggagaatgagat 144481 Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||| ||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 144482 ctctaaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggcccggttaag 144541 Query: 543 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 602 || |||||| |||||||||||||||||||||||||| | |||| |||||||| ||| Sbjct: 144542 gg-ggagaaccc-ccggagccgtagcgaaagcgagtcttgctggggcaattgtcaccgct 144599 Query: 603 tatggacccgaacctgggtgatcta 627 ||| |||||||||||||||||||| Sbjct: 144600 tataaacccgaacctgggtgatcta 144624 Score = 507 bits (256), Expect = e-140 Identities = 536/625 (85%), Gaps = 6/625 (0%) Strand = Plus / Minus Query: 3 gaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctga 62 ||||||| | |||||||||| | |||||| ||||||| |||||| |||||||||||||| Sbjct: 88845 gaaaataggtatagatccggag-attcccgaataggttaaccttccaaactgcctgctga 88787 Query: 63 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 122 || || ||||| |||||||||||| ||||||||||||||||||||||||| ||||| | Sbjct: 88786 attcagaagcagacaagagacaacccggcgaactgaaacatcttagtagccggaggagga 88727 Query: 123 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 182 |||||||||||||||||| ||||| ||||||| |||| |||| ||||||||||||||| Sbjct: 88726 aaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaaccgtgaa 88667 Query: 183 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 242 ||||||||||||||||| || || | || | ||||||||||| ||||||||| | Sbjct: 88666 gacggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgagtgctg 88607 Query: 243 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 302 ||||| |||||| | ||||||||||||| ||| | |||||| | |||| |||| || Sbjct: 88606 caccccagatggtgatagtccagtagccggaagtacagctagctcacgctccaacccaag 88547 Query: 303 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 362 |||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 88546 tagcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaata 88487 Query: 363 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 422 ||||| |||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 88486 ttcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcg 88427 Query: 423 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 482 || ||||||||||||| |||||||| ||||||||||||||||||||| ||| | ||| Sbjct: 88426 gggagtgaaatagaacatgaaaccg---cgagctcccaagcagtgggaggagaatgagat 88370 Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||| ||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 88369 ctctaaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggcccggttaag 88310 Query: 543 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 602 || |||||| |||||||||||||||||||||||||| | |||| |||||||| ||| Sbjct: 88309 gg-ggagaaccc-ccggagccgtagcgaaagcgagtcttgctggggcaattgtcaccgct 88252 Query: 603 tatggacccgaacctgggtgatcta 627 ||| |||||||||||||||||||| Sbjct: 88251 tataaacccgaacctgggtgatcta 88227
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 434 bits (219), Expect = e-118 Identities = 312/340 (91%), Gaps = 4/340 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| ||||||||| | | || | |||||||||||||| |||||| ||||| Sbjct: 2685 tgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctg 2743 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||| | |||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2744 aatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccagaggaaa 2803 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2804 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 2863 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tg 239 |||||||||||||||||||| ||||||| || ||||||||||||||||| | ||| || Sbjct: 2864 aaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatg 2923 Query: 240 ccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc 299 | |||||||||||||| | |||||||||||||||||||||||| ||||| |||||||||| Sbjct: 2924 ctgcaccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctctgaccc 2982 Query: 300 gagtagcatggggcacgtggaatcccgtgtgaatcagcaa 339 ||||||||| |||||||||||||||||||||||||||||| Sbjct: 2983 gagtagcatagggcacgtggaatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 434 bits (219), Expect = e-118 Identities = 312/340 (91%), Gaps = 4/340 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||| ||||||||| | | || | |||||||||||||| |||||| ||||| Sbjct: 940 tgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctg 998 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||| | |||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 999 aatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccagaggaaa 1058 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1059 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 1118 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tg 239 |||||||||||||||||||| ||||||| || ||||||||||||||||| | ||| || Sbjct: 1119 aaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatg 1178 Query: 240 ccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc 299 | |||||||||||||| | |||||||||||||||||||||||| ||||| |||||||||| Sbjct: 1179 ctgcaccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctctgaccc 1237 Query: 300 gagtagcatggggcacgtggaatcccgtgtgaatcagcaa 339 ||||||||| |||||||||||||||||||||||||||||| Sbjct: 1238 gagtagcatagggcacgtggaatcccgtgtgaatcagcaa 1277
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 416 bits (210), Expect = e-113 Identities = 264/280 (94%), Gaps = 4/280 (1%) Strand = Plus / Plus Query: 257 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 316 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 317 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 377 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 436 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 437 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 496 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 497 ctgttgaagaatgagccggcgactcataggcagtggcttg 536 |||||||||||||||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcataggcagtggcttg 278
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 36 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 95 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 96 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 155 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 156 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 215 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 216 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 275 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 276 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 335 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 336 gcaaggaccaccttgcaag 354 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 157 bits (79), Expect = 5e-35 Identities = 121/135 (89%), Gaps = 5/135 (3%) Strand = Plus / Minus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 543 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 602 |||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| Sbjct: 3189 -----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgct 3135 Query: 603 tatggacccgaacct 617 ||||||||||||||| Sbjct: 3134 tatggacccgaacct 3120 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 363 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 422 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 423 ggtagtgaaatagaacgtgaaacc 446 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 133 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 192 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 193 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 251 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 252 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 311 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 312 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 371 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 372 gaccgata 379 |||||||| Sbjct: 241 gaccgata 248
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 389 bits (196), Expect = e-105 Identities = 208/211 (98%), Gaps = 1/211 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 84 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 142 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 202 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 262 Query: 182 aaacggggttgtgggagagcaatacaagcgt 212 ||||||||||||||||||||||||||||||| Sbjct: 263 aaacggggttgtgggagagcaatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 389 bits (196), Expect = e-105 Identities = 208/211 (98%), Gaps = 1/211 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| Sbjct: 84 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctg 142 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 202 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 262 Query: 182 aaacggggttgtgggagagcaatacaagcgt 212 ||||||||||||||||||||||||||||||| Sbjct: 263 aaacggggttgtgggagagcaatacaagcgt 293
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 383 bits (193), Expect = e-103 Identities = 299/332 (90%), Gaps = 8/332 (2%) Strand = Plus / Plus Query: 296 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 355 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 356 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 415 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 416 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 475 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 476 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 535 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 614 Query: 536 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 595 |||||||| | ||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 615 ggttaaggcga--gaa---gccggagccgtagcgaaagcgagtctttctagggcgaatgt 669 Query: 596 cactgcttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||| |||||||||| Sbjct: 670 cactgcttatggacccgaacccgggtgatcta 701 Score = 184 bits (93), Expect = 2e-43 Identities = 120/129 (93%) Strand = Plus / Plus Query: 51 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 110 |||||||||||||| || | |||||||||||||||||||||||||||||||||||||| Sbjct: 122 actgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagta 181 Query: 111 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 170 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||| Sbjct: 182 gccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagc 241 Query: 171 ctaaaccgt 179 ||||||||| Sbjct: 242 ctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 383 bits (193), Expect = e-103 Identities = 299/332 (90%), Gaps = 8/332 (2%) Strand = Plus / Plus Query: 296 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 355 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 356 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 415 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 416 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 475 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 476 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 535 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 627 Query: 536 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 595 |||||||| | ||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 628 ggttaaggcga--gaa---gccggagccgtagcgaaagcgagtctttctagggcgaatgt 682 Query: 596 cactgcttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||| |||||||||| Sbjct: 683 cactgcttatggacccgaacccgggtgatcta 714 Score = 184 bits (93), Expect = 2e-43 Identities = 120/129 (93%) Strand = Plus / Plus Query: 51 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 110 |||||||||||||| || | |||||||||||||||||||||||||||||||||||||| Sbjct: 135 actgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagta 194 Query: 111 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 170 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||| Sbjct: 195 gccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagc 254 Query: 171 ctaaaccgt 179 ||||||||| Sbjct: 255 ctaaaccgt 263
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 379 bits (191), Expect = e-102 Identities = 274/298 (91%), Gaps = 3/298 (1%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||| ||||||||||||| | |||||| |||||| |||||||| |||||| ||||| Sbjct: 177117 tgaaaatcagcatagatccggag-attcccgaatagggcaacctttcgaactgc-tgctg 177174 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||| Sbjct: 177175 aatccatgggcaggcaagagagaaccaggcgaactgaaagatcttagtagccagaggaaa 177234 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 177235 agaaagcaaaagcgattcccgtagtagcggcgggcgaaatgggagctgcctaaaccgtga 177294 Query: 182 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgc 240 ||||||||||||||||||||||||||||||| |||| |||||||||||| | || ||| Sbjct: 177295 aaacggggttgtgggagagcaatacaagcgtcgtgcagctaggcgaagcagcccgaatgc 177354 Query: 241 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 298 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 177355 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttaggctctgacc 177412 Score = 232 bits (117), Expect = 1e-57 Identities = 138/145 (95%), Gaps = 5/145 (3%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 543 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 602 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 177465 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 177519 Query: 603 tatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||| Sbjct: 177520 tatggacccgaacctgggtgatcta 177544 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 371 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 371 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 90 gcgaactgaaacatcttagtagc 112 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 90 gcgaactgaaacatcttagtagc 112 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 377 bits (190), Expect = e-101 Identities = 299/332 (90%), Gaps = 10/332 (3%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 476 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 477 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 536 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctg 732 Query: 537 gttaagggaacg-gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 595 ||||||| || ||| || |||||||||||||||||||||||| |||||||| ||| Sbjct: 733 gttaagg---cgtgaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgt 786 Query: 596 cactgcttatggacccgaacctgggtgatcta 627 ||||||||||||||||||||| |||||||||| Sbjct: 787 cactgcttatggacccgaacccgggtgatcta 818 Score = 182 bits (92), Expect = 9e-43 Identities = 119/128 (92%) Strand = Plus / Plus Query: 51 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 110 |||||||||||||| || | |||||||||||||||||||||||||||||||||||||| Sbjct: 239 actgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagta 298 Query: 111 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 170 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||| Sbjct: 299 gccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagc 358 Query: 171 ctaaaccg 178 |||||||| Sbjct: 359 ctaaaccg 366
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 373 bits (188), Expect = e-100 Identities = 356/410 (86%), Gaps = 9/410 (2%) Strand = Plus / Plus Query: 218 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 277 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 278 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 337 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 338 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 397 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 398 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 457 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 458 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 517 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 518 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 577 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 599 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 653 Query: 578 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatcta 627 || ||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 654 tc-taacagggcgattgtcactgcttatggacccgaacccgggtgatcta 702 Score = 200 bits (101), Expect = 4e-48 Identities = 134/145 (92%) Strand = Plus / Plus Query: 57 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 116 |||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||| Sbjct: 141 tgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccaga 200 Query: 117 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 176 ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 201 ggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaac 260 Query: 177 cgtgaaaacggggttgtgggagagc 201 || |||| ||||||||||||||||| Sbjct: 261 cgcgaaagcggggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 373 bits (188), Expect = e-100 Identities = 356/410 (86%), Gaps = 9/410 (2%) Strand = Plus / Minus Query: 218 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 277 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 278 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 337 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 338 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 397 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 398 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 457 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 458 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 517 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 518 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 577 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 124666 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 124612 Query: 578 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatcta 627 || ||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 124611 tc-taacagggcgattgtcactgcttatggacccgaacccgggtgatcta 124563 Score = 373 bits (188), Expect = e-100 Identities = 356/410 (86%), Gaps = 9/410 (2%) Strand = Plus / Plus Query: 218 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 277 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 278 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 337 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 338 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 397 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 398 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 457 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 458 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 517 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 518 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 577 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 95200 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 95254 Query: 578 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatcta 627 || ||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 95255 tc-taacagggcgattgtcactgcttatggacccgaacccgggtgatcta 95303 Score = 200 bits (101), Expect = 4e-48 Identities = 134/145 (92%) Strand = Plus / Minus Query: 57 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 116 |||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||| Sbjct: 125124 tgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccaga 125065 Query: 117 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 176 ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 125064 ggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaac 125005 Query: 177 cgtgaaaacggggttgtgggagagc 201 || |||| ||||||||||||||||| Sbjct: 125004 cgcgaaagcggggttgtgggagagc 124980 Score = 200 bits (101), Expect = 4e-48 Identities = 134/145 (92%) Strand = Plus / Plus Query: 57 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 116 |||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||| Sbjct: 94742 tgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccaga 94801 Query: 117 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 176 ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 94802 ggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaac 94861 Query: 177 cgtgaaaacggggttgtgggagagc 201 || |||| ||||||||||||||||| Sbjct: 94862 cgcgaaagcggggttgtgggagagc 94886
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 371 bits (187), Expect = 2e-99 Identities = 524/625 (83%), Gaps = 20/625 (3%) Strand = Plus / Plus Query: 4 aaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaa 63 ||||||| ||||||||||| | |||||| ||||||| ||||||| |||||| |||| | Sbjct: 88 aaaataaacatagatccggag-attcccgaataggtaaaccttt--aactgc-tgcttat 143 Query: 64 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 123 |||||| |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct: 144 tccatg-gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaat 201 Query: 124 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 183 |||||||||| |||||| |||||| ||| | |||| |||| ||||||||| || ||| Sbjct: 202 aaagcaaaagttattcccatagtagtggcaaatgaaaagggaacagcctaaatcgctaaa 261 Query: 184 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 243 | ||||||| || ||||||| ||| || || |||||| || || || |||| | | Sbjct: 262 atggggttgggg---agcaataaaagtattttgttgctagacggagtagtggagttctga 318 Query: 244 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga-cccgag 302 ||||||||||| | |||||||||| |||| |||| ||||||||||| | | |||||| Sbjct: 319 accctagatggtgagagtccagtagtataaagtatcattagcttatgcttttaacccgag 378 Query: 303 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 362 ||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 379 tagcatgggacatatggaatcccgtgtgaatcagcaaggaccaccttgaaaggctaaata 438 Query: 363 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 422 ||| ||||||||| |||| |||||||||||||||||||| ||||||||||||||||| || Sbjct: 439 ctcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacccccattg 498 Query: 423 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 482 || |||||| |||||| ||||| | | ||| ||||||||||||||| || || | Sbjct: 499 gggagtgaactagaacatgaaaac---atatgctaccaagcagtgggaggagacaggg-- 553 Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||| |||||| ||||||||||||| |||||||||||| | |||||| |||||||| Sbjct: 554 ctctgaccacgtgcccgttgaagaatgagtcggcgactcataagtagtggcctggttaag 613 Query: 543 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 602 | |||| ||||||||||| |||||||||| |||||| |||||| | ||||| |||| Sbjct: 614 g----ggaa-ccaccggagccatagcgaaagcaagtcttcatagggaaaatgtcattgct 668 Query: 603 tatggacccgaacctgggtgatcta 627 | ||||||||||| ||||||||||| Sbjct: 669 tgtggacccgaacttgggtgatcta 693
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 422 gggtagtgaaatagaacgtgaaaccgt 448 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 353 bits (178), Expect = 4e-94 Identities = 314/356 (88%), Gaps = 10/356 (2%) Strand = Plus / Plus Query: 272 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 331 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 332 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 391 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 392 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 451 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 452 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 511 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 512 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 571 ||||||||||||| | |||||| ||||||||| |||| ||||||||||| ||||||| Sbjct: 608 ccggcgactcataagtagtggcctggttaagg----ggaa-ccaccggagccatagcgaa 662 Query: 572 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatcta 627 ||| |||||| ||||||| | ||||| |||||||| |||||||| ||||||||||| Sbjct: 663 agcaagtcttcatagggcaaatgtcattgcttatgtacccgaacttgggtgatcta 718 Score = 133 bits (67), Expect = 8e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 71 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 130 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 131 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 190 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 191 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 250 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 251 a 251 | Sbjct: 325 a 325
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 391 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 450 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 451 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 510 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 511 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107930 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 107875
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 331 bits (167), Expect = 2e-87 Identities = 293/331 (88%), Gaps = 8/331 (2%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 476 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 477 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 536 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 614 Query: 537 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 596 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 615 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 669 Query: 597 actgcttatggacccgaacctgggtgatcta 627 |||| ||| |||||||||| |||||||||| Sbjct: 670 actgtctatagacccgaacccgggtgatcta 700 Score = 151 bits (76), Expect = 3e-33 Identities = 94/100 (94%) Strand = Plus / Plus Query: 78 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 137 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 agagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 208 Query: 138 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 177 |||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 209 tcccttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 331 bits (167), Expect = 2e-87 Identities = 293/331 (88%), Gaps = 8/331 (2%) Strand = Plus / Minus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 476 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 477 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 536 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 115048 Query: 537 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 596 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 115047 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 114993 Query: 597 actgcttatggacccgaacctgggtgatcta 627 |||| ||| |||||||||| |||||||||| Sbjct: 114992 actgtctatagacccgaacccgggtgatcta 114962 Score = 331 bits (167), Expect = 2e-87 Identities = 293/331 (88%), Gaps = 8/331 (2%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 476 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 477 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 536 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 86940 Query: 537 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 596 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 86941 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 86995 Query: 597 actgcttatggacccgaacctgggtgatcta 627 |||| ||| |||||||||| |||||||||| Sbjct: 86996 actgtctatagacccgaacccgggtgatcta 87026 Score = 151 bits (76), Expect = 3e-33 Identities = 94/100 (94%) Strand = Plus / Minus Query: 78 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 137 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 115514 agagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 115455 Query: 138 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 177 |||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 115454 tcccttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 151 bits (76), Expect = 3e-33 Identities = 94/100 (94%) Strand = Plus / Plus Query: 78 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 137 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 86474 agagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 86533 Query: 138 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 177 |||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 86534 tcccttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 325 bits (164), Expect = 1e-85 Identities = 332/386 (86%), Gaps = 4/386 (1%) Strand = Plus / Plus Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 4666 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 4667 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactgt 4725 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||| |||||||||| Sbjct: 4726 ctatggacccgaacccgggtgatcta 4751 Score = 149 bits (75), Expect = 1e-32 Identities = 93/99 (93%) Strand = Plus / Plus Query: 77 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 136 |||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 4193 aagagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcga 4252 Query: 137 ttcccgtagtagcggcgagcgaaatgggagcagcctaaa 175 ||||| ||||||||||||||||||||||| |||||||| Sbjct: 4253 ttccctgagtagcggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 325 bits (164), Expect = 1e-85 Identities = 332/386 (86%), Gaps = 4/386 (1%) Strand = Plus / Plus Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 634 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactgt 692 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||| |||||||||| Sbjct: 693 ctatggacccgaacccgggtgatcta 718 Score = 149 bits (75), Expect = 1e-32 Identities = 93/99 (93%) Strand = Plus / Plus Query: 77 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 136 |||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 160 aagagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcga 219 Query: 137 ttcccgtagtagcggcgagcgaaatgggagcagcctaaa 175 ||||| ||||||||||||||||||||||| |||||||| Sbjct: 220 ttccctgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 325 bits (164), Expect = 1e-85 Identities = 332/386 (86%), Gaps = 4/386 (1%) Strand = Plus / Plus Query: 242 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 301 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 302 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 361 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 362 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 421 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 422 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 481 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 482 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 541 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 542 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 601 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 634 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactgt 692 Query: 602 ttatggacccgaacctgggtgatcta 627 |||||||||||||| |||||||||| Sbjct: 693 ctatggacccgaacccgggtgatcta 718 Score = 149 bits (75), Expect = 1e-32 Identities = 93/99 (93%) Strand = Plus / Plus Query: 77 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 136 |||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 160 aagagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcga 219 Query: 137 ttcccgtagtagcggcgagcgaaatgggagcagcctaaa 175 ||||| ||||||||||||||||||||||| |||||||| Sbjct: 220 ttccctgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 293 bits (148), Expect = 4e-76 Identities = 287/332 (86%), Gaps = 11/332 (3%) Strand = Plus / Plus Query: 296 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 355 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 356 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 415 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 416 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 475 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 476 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 535 | |||||||||||||||||||||||||||||||||||||||| ||| | |||||| | Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcct 573 Query: 536 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 595 ||||||| ||| || ||||||||||||||||| |||| | || |||| ||| Sbjct: 574 ggttaagagaa-------tactggagccgtagcgaaagcaagtcat-atttggcgcatgt 625 Query: 596 cactgcttatggacccgaacctgggtgatcta 627 ||||| |||| |||||||||| |||||||||| Sbjct: 626 cactgtttatagacccgaacccgggtgatcta 657 Score = 159 bits (80), Expect = 1e-35 Identities = 95/100 (95%) Strand = Plus / Plus Query: 78 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 137 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116 agagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 175 Query: 138 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 177 |||| ||||| |||||||||||||||| ||||||||||| Sbjct: 176 tccctcagtagtggcgagcgaaatgggaacagcctaaacc 215
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 293 bits (148), Expect = 4e-76 Identities = 184/194 (94%), Gaps = 2/194 (1%) Strand = Plus / Minus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 |||||||||||||||||||| | |||||| ||||||||||||||| |||||| ||||| Sbjct: 79684 tgaaaataagcatagatccg-aggattcccgaataggtcaacctttcgaactgc-tgctg 79627 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79626 aattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 79567 Query: 122 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 181 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 79566 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtga 79507 Query: 182 aaacggggttgtgg 195 |||||||||||||| Sbjct: 79506 aaacggggttgtgg 79493
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 250 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 308 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 309 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 368 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 369 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 428 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 429 gaaatagaacgtgaaaccgtgctgagctcc 458 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 250 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 308 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 309 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 368 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 369 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 428 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 429 gaaatagaacgtgaaaccgtgctgagctcc 458 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 289 bits (146), Expect = 6e-75 Identities = 290/334 (86%), Gaps = 13/334 (3%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 476 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 477 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 536 ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 604 Query: 537 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc---gatt 593 ||||||| | | | |||||||| |||||||||||||||| |||||||| || Sbjct: 605 gttaaggaa----attcatccggagccatagcgaaagcgagtctgaatagggcattaatg 660 Query: 594 gtcactgcttatggacccgaacctgggtgatcta 627 |||||| |||||||||||||||| || ||||||| Sbjct: 661 gtcacttcttatggacccgaaccgggatgatcta 694 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 77 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 136 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 137 ttcccgtagtagcggcgagcgaa 159 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 250 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 308 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 309 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 368 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 369 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 428 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 429 gaaatagaacgtgaaaccgtgctgagctcc 458 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 451 tgagctcccaagcagtgggaggggaaagtgatc 483 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575 Score = 46.1 bits (23), Expect = 0.14 Identities = 80/99 (80%) Strand = Plus / Plus Query: 506 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 565 ||||||||| |||||||| ||| ||| ||||||||| || || |||| |||| || Sbjct: 9056578 aatgagccgatgactcataagcaatggtttggttaagagagcgtaacctgtcggaattgt 9056637 Query: 566 agcgaaagcgagtcttaatagggcgattgtcactgctta 604 ||||||||||| |||||||||| | ||| ||||| |||| Sbjct: 9056638 agcgaaagcgactcttaataggacaattttcactactta 9056676
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 250 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 308 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 309 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 368 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 369 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 428 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 429 gaaatagaacgtgaaaccgtgctgagctcc 458 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 451 tgagctcccaagcagtgggaggggaaagtgatc 483 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272 Score = 46.1 bits (23), Expect = 0.14 Identities = 80/99 (80%) Strand = Plus / Plus Query: 506 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 565 ||||||||| |||||||| ||| ||| ||||||||| || || |||| |||| || Sbjct: 9128275 aatgagccgatgactcataagcaatggtttggttaagagagcgtaacctgtcggaattgt 9128334 Query: 566 agcgaaagcgagtcttaatagggcgattgtcactgctta 604 ||||||||||| |||||||||| | ||| ||||| |||| Sbjct: 9128335 agcgaaagcgactcttaataggacaattttcactactta 9128373
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 278 bits (140), Expect = 2e-71 Identities = 290/338 (85%), Gaps = 4/338 (1%) Strand = Plus / Plus Query: 290 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 349 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 350 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 409 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 410 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 469 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 470 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 529 || ||| | |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatag 616 Query: 530 tggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc 589 ||||| ||||||||||| | ||| |||||| |||||||||| |||||| ||||| Sbjct: 617 tggctgggttaagggaa-tttatgcactggagccatagcgaaagcaagtcttttcagggc 675 Query: 590 gattgtcactgcttatggacccgaacctgggtgatcta 627 |||||||||| |||||||||||||| |||||||||| Sbjct: 676 tattgtcactgtctatggacccgaacccgggtgatcta 713 Score = 149 bits (75), Expect = 1e-32 Identities = 93/99 (93%) Strand = Plus / Plus Query: 77 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 136 |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 161 aagagacaacctggtgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcga 220 Query: 137 ttcccgtagtagcggcgagcgaaatgggagcagcctaaa 175 || || ||||||||||||||||||||||| |||||||| Sbjct: 221 tttcctgagtagcggcgagcgaaatgggagaagcctaaa 259
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 278 bits (140), Expect = 2e-71 Identities = 215/238 (90%), Gaps = 9/238 (3%) Strand = Plus / Plus Query: 390 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 449 |||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 1 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta 60 Query: 450 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 509 || ||||||||||||||||| || | | ||||||||||||||||||||||||||| Sbjct: 61 ---agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatg 116 Query: 510 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 569 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 117 agccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcg 171 Query: 570 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatcta 627 |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 172 aaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatcta 229
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 274 bits (138), Expect = 3e-70 Identities = 222/247 (89%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 476 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 477 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 536 | ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 643 Query: 537 gttaagg 543 ||||||| Sbjct: 644 gttaagg 650 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 77 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 136 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 137 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 176 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Plus Query: 594 gtcactgcttatggacccgaacctgggtgatcta 627 |||||| |||||||||||||||| || ||||||| Sbjct: 722 gtcacttcttatggacccgaaccgggatgatcta 755
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 272 bits (137), Expect = 1e-69 Identities = 281/327 (85%), Gaps = 9/327 (2%) Strand = Plus / Plus Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 421 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 480 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattga 561 Query: 481 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 540 | || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggtta 621 Query: 541 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 600 || |||| |||||| |||| |||||||||| |||||| |||||||||||||||| Sbjct: 622 ag-----ggaatccaccgaagccatagcgaaagcaagtctt-tcagggcgattgtcactg 675 Query: 601 cttatggacccgaacctgggtgatcta 627 ||||||||||||||| |||||||||| Sbjct: 676 tttatggacccgaacccgggtgatcta 702 Score = 151 bits (76), Expect = 3e-33 Identities = 109/120 (90%) Strand = Plus / Plus Query: 78 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 137 ||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 162 agagaaaacctagtgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgat 221 Query: 138 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 197 |||| ||||| ||||||||||| |||| |||||||||||| |||| ||||||||||||| Sbjct: 222 tccctcagtagtggcgagcgaaacgggaacagcctaaaccgcgaaagcggggttgtggga 281
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 266 bits (134), Expect = 8e-68 Identities = 146/149 (97%), Gaps = 1/149 (0%) Strand = Plus / Plus Query: 2 tgaaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctg 61 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| | Sbjct: 75852 tgaaaataagcatagatccggag-attcccaaataggtcaaccttttaaactgcctgcgg 75910 Query: 62 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75911 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 75970 Query: 122 agaaagcaaaagcgattcccgtagtagcg 150 ||||||||||||||||||||||||||||| Sbjct: 75971 agaaagcaaaagcgattcccgtagtagcg 75999 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 371 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 417 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 371 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 417 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ggcgaactgaaacatcttag 108 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 262 bits (132), Expect = 1e-66 Identities = 282/332 (84%), Gaps = 10/332 (3%) Strand = Plus / Plus Query: 296 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 355 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 356 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 415 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 416 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 475 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 476 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 535 | | |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcct 1020 Query: 536 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 595 ||||||||| | |||| |||||||||||||||||||| | |||||| ||| Sbjct: 1021 ggttaagggta-------taccgaagccgtagcgaaagcgagtcattcaagggcgcatgt 1073 Query: 596 cactgcttatggacccgaacctgggtgatcta 627 ||||| ||||||||||||||| |||||||||| Sbjct: 1074 cactgtttatggacccgaacccgggtgatcta 1105 Score = 155 bits (78), Expect = 2e-34 Identities = 136/154 (88%), Gaps = 1/154 (0%) Strand = Plus / Plus Query: 26 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 85 |||||| |||||| |||||| | ||||||| |||||||| ||| || | ||||||||| Sbjct: 511 attcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaagagacaa 569 Query: 86 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 145 ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||| ||| Sbjct: 570 cctggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattcccttag 629 Query: 146 tagcggcgagcgaaatgggagcagcctaaaccgt 179 ||| ||||||||||| |||| ||||||||||||| Sbjct: 630 tagtggcgagcgaaacgggaacagcctaaaccgt 663
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 260 bits (131), Expect = 5e-66 Identities = 223/253 (88%), Gaps = 3/253 (1%) Strand = Plus / Plus Query: 291 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 350 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 351 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 410 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 411 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 470 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 471 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagt 530 || || | || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagt 574 Query: 531 ggcttggttaagg 543 ||| ||||||||| Sbjct: 575 ggcctggttaagg 587 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 84 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 143 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 144 agtagcggcgagcgaaatgggagcagcctaaacc 177 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 555 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 614 |||| |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||| Sbjct: 592 accgaagccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaa 651 Query: 615 cctgggtgatcta 627 || |||||||||| Sbjct: 652 cccgggtgatcta 664
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 252 bits (127), Expect = 1e-63 Identities = 211/236 (89%), Gaps = 11/236 (4%) Strand = Plus / Plus Query: 392 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 451 |||||||||| |||||||||||||| | ||| ||||||||||||| ||||||||| Sbjct: 1 cgtgagggaagggtgaaaagaaccc--atcggggagtgaaatagaacatgaaaccgta-- 56 Query: 452 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 511 || ||||||||||||||||| || | | ||||||||||||||||||||||||||||| Sbjct: 57 -agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgag 114 Query: 512 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 571 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 115 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 169 Query: 572 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatcta 627 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 170 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatcta 225
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 242 bits (122), Expect = 1e-60 Identities = 217/247 (87%), Gaps = 5/247 (2%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 476 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 477 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 536 ||| | |||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttg 610 Query: 537 gttaagg 543 ||||||| Sbjct: 611 gttaagg 617 Score = 135 bits (68), Expect = 2e-28 Identities = 110/124 (88%) Strand = Plus / Plus Query: 55 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 114 |||||||||| ||| ||||| |||| |||| || |||||||||||||||||||||| Sbjct: 126 cctgctgaattcataggcagggtagaggaaacccggtgaactgaaacatcttagtagccg 185 Query: 115 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 174 ||||||||||||||||| ||||||||| |||||||||||||||||| |||| |||||||| Sbjct: 186 gaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaacgggaccagcctaa 245 Query: 175 accg 178 |||| Sbjct: 246 accg 249 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 555 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 614 ||||||||| ||||||||||||||| ||||||||| ||||||| ||| |||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaa 683 Query: 615 cctgggtgatcta 627 || |||||||||| Sbjct: 684 cccgggtgatcta 696
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 5e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 225 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 284 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 285 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 344 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 345 accttgcaaggctaaatactcctgggtgaccga 377 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 240 bits (121), Expect = 5e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 476 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 477 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 533 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 628 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 78 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 137 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 138 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 178 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 558 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 617 |||||| |||||||||||||||| ||||||||| |||| || |||||||||||||| Sbjct: 650 ggagccatagcgaaagcgagtctgaatagggcgtatgtccgtgtctatggacccgaaccc 709 Query: 618 gggtgatcta 627 |||||||||| Sbjct: 710 gggtgatcta 719
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 240 bits (121), Expect = 5e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 476 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 477 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 533 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 2397 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 78 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 137 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 138 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 178 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 558 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 617 |||||| |||||||||||||||| ||||||||| |||| || |||||||||||||| Sbjct: 2419 ggagccatagcgaaagcgagtctgaatagggcgtatgtccgtgtctatggacccgaaccc 2478 Query: 618 gggtgatcta 627 |||||||||| Sbjct: 2479 gggtgatcta 2488
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 240 bits (121), Expect = 5e-60 Identities = 124/125 (99%) Strand = Plus / Plus Query: 503 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 562 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 563 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 622 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 121 Query: 623 atcta 627 ||||| Sbjct: 122 atcta 126
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 238 bits (120), Expect = 2e-59 Identities = 219/249 (87%), Gaps = 6/249 (2%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 415 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 416 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 475 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 476 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 535 | | |||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggctt 589 Query: 536 ggttaaggg 544 ||||||||| Sbjct: 590 ggttaaggg 598 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 83 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 142 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 143 tagtagcggcgagcgaaatgggagcagcctaaac 176 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 238 bits (120), Expect = 2e-59 Identities = 123/124 (99%) Strand = Plus / Plus Query: 504 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 564 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtga 623 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtga 120 Query: 624 tcta 627 |||| Sbjct: 121 tcta 124
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 244 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 303 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 304 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 363 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 364 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 423 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 424 gtagtgaaatagaacgtgaaa 444 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 143 bits (72), Expect = 8e-31 Identities = 128/145 (88%), Gaps = 5/145 (3%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 543 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 602 | |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 626 g----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgct 680 Query: 603 tatggacccgaacctgggtgatcta 627 ||||||||||||| ||||||||||| Sbjct: 681 tatggacccgaacttgggtgatcta 705 Score = 123 bits (62), Expect = 7e-25 Identities = 161/189 (85%), Gaps = 4/189 (2%) Strand = Plus / Plus Query: 4 aaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaa 63 ||||||| ||||||||||| | |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 87 aaaataaacatagatccggag-attcccgaataggtaaacctttaaaactgc-tgcttat 144 Query: 64 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 123 |||||| |||| ||| ||| ||||||| |||||||| ||||||||||| |||||||||| Sbjct: 145 tccatg-gcagacaaaaga-aacctggtgaactgaatcatcttagtagacagaggaaaat 202 Query: 124 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 183 |||||||||| ||| || |||||| |||||| |||| |||| |||||||||||| ||| Sbjct: 203 aaagcaaaagttattaccatagtagtggcgagtgaaaagggaacagcctaaaccgctaaa 262 Query: 184 acggggttg 192 | ||||||| Sbjct: 263 atggggttg 271
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 232 bits (117), Expect = 1e-57 Identities = 138/145 (95%), Gaps = 5/145 (3%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 543 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 602 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 122 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 176 Query: 603 tatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||| Sbjct: 177 tatggacccgaacctgggtgatcta 201
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 232 bits (117), Expect = 1e-57 Identities = 138/145 (95%), Gaps = 5/145 (3%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 543 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 602 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 160 Query: 603 tatggacccgaacctgggtgatcta 627 ||||||||||||||||||||||||| Sbjct: 161 tatggacccgaacctgggtgatcta 185
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 224 bits (113), Expect = 3e-55 Identities = 183/203 (90%), Gaps = 10/203 (4%) Strand = Plus / Plus Query: 426 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 485 ||||||||||||| ||||||||| |||||||||||||||||||| | || ||| Sbjct: 364690 agtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagccc-tgggctc 364745 Query: 486 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 545 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364746 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag--- 364802 Query: 546 acggaacccaccggagccgtagcgaaa-gcgagtcttaatagggcgattgtcactgctta 604 ||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| Sbjct: 364803 --ggaacccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgctta 364860 Query: 605 tggacccgaacctgggtgatcta 627 ||||||||||||||||||||||| Sbjct: 364861 tggacccgaacctgggtgatcta 364883 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 371 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 11520 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 11475
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 259 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 318 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 319 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 378 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 379 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 438 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 439 gtgaaa 444 ||||| Sbjct: 504 atgaaa 509 Score = 111 bits (56), Expect = 3e-21 Identities = 146/171 (85%), Gaps = 4/171 (2%) Strand = Plus / Plus Query: 4 aaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaa 63 ||||||| ||||||||||| | |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatagatccggag-attcccgaataggtaaacctttaaaactgc-tgcttat 145 Query: 64 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 123 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 146 tccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaat 203 Query: 124 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 174 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 204 aaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 543 gg 544 || Sbjct: 602 gg 603
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 259 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 318 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 319 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 378 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 379 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 438 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 439 gtgaaa 444 ||||| Sbjct: 503 atgaaa 508 Score = 111 bits (56), Expect = 3e-21 Identities = 146/171 (85%), Gaps = 4/171 (2%) Strand = Plus / Plus Query: 4 aaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaa 63 ||||||| ||||||||||| | |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatagatccggag-attcccgaataggtaaacctttaaaactgc-tgcttat 145 Query: 64 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 123 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 146 tccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaat 203 Query: 124 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 174 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 204 aaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 543 gg 544 || Sbjct: 601 gg 602
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 259 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 318 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 319 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 378 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 379 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 438 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 439 gtgaaa 444 ||||| Sbjct: 504 atgaaa 509 Score = 111 bits (56), Expect = 3e-21 Identities = 146/171 (85%), Gaps = 4/171 (2%) Strand = Plus / Plus Query: 4 aaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaa 63 ||||||| ||||||||||| | |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatagatccggag-attcccgaataggtaaacctttaaaactgc-tgcttat 145 Query: 64 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 123 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 146 tccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaat 203 Query: 124 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 174 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 204 aaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 543 gg 544 || Sbjct: 602 gg 603
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 259 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 318 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 319 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 378 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 379 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 438 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 439 gtgaaa 444 ||||| Sbjct: 504 atgaaa 509 Score = 111 bits (56), Expect = 3e-21 Identities = 146/171 (85%), Gaps = 4/171 (2%) Strand = Plus / Plus Query: 4 aaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaa 63 ||||||| ||||||||||| | |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatagatccggag-attcccgaataggtaaacctttaaaactgc-tgcttat 145 Query: 64 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 123 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 146 tccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaat 203 Query: 124 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 174 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 204 aaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 543 gg 544 || Sbjct: 602 gg 603
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 259 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 318 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 319 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 378 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 379 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 438 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 439 gtgaaa 444 ||||| Sbjct: 504 atgaaa 509 Score = 111 bits (56), Expect = 3e-21 Identities = 146/171 (85%), Gaps = 4/171 (2%) Strand = Plus / Plus Query: 4 aaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaa 63 ||||||| ||||||||||| | |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatagatccggag-attcccgaataggtaaacctttaaaactgc-tgcttat 145 Query: 64 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 123 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 146 tccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaat 203 Query: 124 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 174 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 204 aaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 543 gg 544 || Sbjct: 602 gg 603
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 259 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 318 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 319 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 378 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 379 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 438 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 439 gtgaaa 444 ||||| Sbjct: 504 atgaaa 509 Score = 111 bits (56), Expect = 3e-21 Identities = 140/163 (85%), Gaps = 4/163 (2%) Strand = Plus / Plus Query: 4 aaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaa 63 ||||||| ||||||||||| | |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatagatccggag-attcccgaataggtaaacctttaaaactgc-tgcttat 145 Query: 64 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 123 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 146 tccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaat 203 Query: 124 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 166 |||||||||| |||||| |||||| ||||| ||||| ||||| Sbjct: 204 aaagcaaaagttattcccatagtagtggcgaacgaaaagggag 246 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 543 gg 544 || Sbjct: 602 gg 603
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 259 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 318 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 319 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 378 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 379 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 438 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 439 gtgaaa 444 ||||| Sbjct: 503 atgaaa 508 Score = 111 bits (56), Expect = 3e-21 Identities = 146/171 (85%), Gaps = 4/171 (2%) Strand = Plus / Plus Query: 4 aaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaa 63 ||||||| ||||||||||| | |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatagatccggag-attcccgaataggtaaacctttaaaactgc-tgcttat 145 Query: 64 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 123 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 146 tccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaat 203 Query: 124 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 174 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 204 aaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 543 gg 544 || Sbjct: 601 gg 602
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 259 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 318 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 319 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 378 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 379 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 438 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 439 gtgaaa 444 ||||| Sbjct: 504 atgaaa 509 Score = 111 bits (56), Expect = 3e-21 Identities = 146/171 (85%), Gaps = 4/171 (2%) Strand = Plus / Plus Query: 4 aaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaa 63 ||||||| ||||||||||| | |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatagatccggag-attcccgaataggtaaacctttaaaactgc-tgcttat 145 Query: 64 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 123 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 146 tccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaat 203 Query: 124 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 174 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 204 aaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 543 gg 544 || Sbjct: 602 gg 603
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 259 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 318 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 319 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 378 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 379 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 438 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 439 gtgaaa 444 ||||| Sbjct: 504 atgaaa 509 Score = 111 bits (56), Expect = 3e-21 Identities = 146/171 (85%), Gaps = 4/171 (2%) Strand = Plus / Plus Query: 4 aaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaa 63 ||||||| ||||||||||| | |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatagatccggag-attcccgaataggtaaacctttaaaactgc-tgcttat 145 Query: 64 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 123 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 146 tccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaat 203 Query: 124 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 174 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 204 aaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 543 gg 544 || Sbjct: 602 gg 603
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 259 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 318 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 319 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 378 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 379 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 438 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 439 gtgaaa 444 ||||| Sbjct: 504 atgaaa 509 Score = 111 bits (56), Expect = 3e-21 Identities = 146/171 (85%), Gaps = 4/171 (2%) Strand = Plus / Plus Query: 4 aaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaa 63 ||||||| ||||||||||| | |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatagatccggag-attcccgaataggtaaacctttaaaactgc-tgcttat 145 Query: 64 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 123 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 146 tccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaat 203 Query: 124 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 174 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 204 aaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 543 gg 544 || Sbjct: 602 gg 603
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 259 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 318 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 319 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 378 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 379 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 438 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 439 gtgaaa 444 ||||| Sbjct: 504 atgaaa 509 Score = 119 bits (60), Expect = 1e-23 Identities = 147/171 (85%), Gaps = 4/171 (2%) Strand = Plus / Plus Query: 4 aaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaa 63 ||||||| ||||||||||| | |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatagatccggag-attcccgaataggtaaacctttaaaactgc-tgcttat 145 Query: 64 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 123 |||||| | || ||||||| |||| |||||||||||||||||||||| ||||||||||| Sbjct: 146 tccatg-gaagacaagaga-aacccggcgaactgaaacatcttagtatccagaggaaaat 203 Query: 124 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 174 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 204 aaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 543 gg 544 || Sbjct: 602 gg 603
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 259 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 318 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 319 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 378 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 379 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 438 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 439 gtgaaa 444 ||||| Sbjct: 504 atgaaa 509 Score = 111 bits (56), Expect = 3e-21 Identities = 146/171 (85%), Gaps = 4/171 (2%) Strand = Plus / Plus Query: 4 aaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaa 63 ||||||| ||||||||||| | |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatagatccggag-attcccgaataggtaaacctttaaaactgc-tgcttat 145 Query: 64 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 123 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 146 tccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaat 203 Query: 124 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 174 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 204 aaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 543 gg 544 || Sbjct: 602 gg 603
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 259 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 318 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 319 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 378 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 379 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 438 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 439 gtgaaa 444 ||||| Sbjct: 504 atgaaa 509 Score = 111 bits (56), Expect = 3e-21 Identities = 146/171 (85%), Gaps = 4/171 (2%) Strand = Plus / Plus Query: 4 aaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaa 63 ||||||| ||||||||||| | |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatagatccggag-attcccgaataggtaaacctttaaaactgc-tgcttat 145 Query: 64 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 123 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 146 tccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaat 203 Query: 124 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 174 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 204 aaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 543 gg 544 || Sbjct: 602 gg 603
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 259 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 318 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 319 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 378 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 379 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 438 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 439 gtgaaa 444 ||||| Sbjct: 504 atgaaa 509 Score = 111 bits (56), Expect = 3e-21 Identities = 146/171 (85%), Gaps = 4/171 (2%) Strand = Plus / Plus Query: 4 aaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaa 63 ||||||| ||||||||||| | |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatagatccggag-attcccgaataggtaaacctttaaaactgc-tgcttat 145 Query: 64 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 123 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 146 tccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaat 203 Query: 124 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 174 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 204 aaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 543 gg 544 || Sbjct: 602 gg 603
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 259 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 318 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 319 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 378 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 379 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 438 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 439 gtgaaa 444 ||||| Sbjct: 504 atgaaa 509 Score = 111 bits (56), Expect = 3e-21 Identities = 146/171 (85%), Gaps = 4/171 (2%) Strand = Plus / Plus Query: 4 aaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaa 63 ||||||| ||||||||||| | |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatagatccggag-attcccgaataggtaaacctttaaaactgc-tgcttat 145 Query: 64 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 123 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 146 tccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaat 203 Query: 124 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 174 |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 204 aaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 543 gg 544 || Sbjct: 602 gg 603
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 218 bits (110), Expect = 2e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 474 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 475 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 534 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 535 tggttaagg 543 ||||||||| Sbjct: 621 tggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 92 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 151 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 152 cgagcgaaatgggagcagcctaaacc 177 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 594 gtcactgcttatggacccgaacctgggtgatcta 627 |||||| |||||||||||||||| |||||||||| Sbjct: 683 gtcacttcttatggacccgaacccgggtgatcta 716
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 218 bits (110), Expect = 2e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 474 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 475 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 534 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 535 tggttaagg 543 ||||||||| Sbjct: 621 tggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 92 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 151 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 152 cgagcgaaatgggagcagcctaaacc 177 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 594 gtcactgcttatggacccgaacctgggtgatcta 627 |||||| |||||||||||||||| |||||||||| Sbjct: 683 gtcacttcttatggacccgaacccgggtgatcta 716
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 214 bits (108), Expect = 3e-52 Identities = 206/237 (86%), Gaps = 5/237 (2%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 476 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 477 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 533 ||| ||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggc 748 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 77 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 136 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 137 ttcccgtagtagcggcgagcgaaatggga 165 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 594 gtcactgcttatggacccgaacctgggtgatcta 627 |||||| ||||||||||||||||||| ||||||| Sbjct: 806 gtcacttcttatggacccgaacctggatgatcta 839
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 1e-51 Identities = 140/151 (92%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccg 447 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 137 bits (69), Expect = 5e-29 Identities = 96/105 (91%) Strand = Plus / Plus Query: 73 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 132 |||||||||| |||| || |||||||||||||| ||||||| ||||||||||||||||| Sbjct: 136 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaac 195 Query: 133 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 177 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 196 gcgattcccatagtagcggcgagcgaaaagggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 485 ctgaccgcgtgcctgttgaagaatgagccggcgact 520 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 566 agcgaaagcgagtcttaatagggc 589 ||||||||||||||| |||||||| Sbjct: 873 agcgaaagcgagtctgaatagggc 896
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 259 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 318 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 319 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 378 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 379 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 438 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 439 gtgaaa 444 ||||| Sbjct: 504 atgaaa 509 Score = 111 bits (56), Expect = 3e-21 Identities = 140/163 (85%), Gaps = 4/163 (2%) Strand = Plus / Plus Query: 4 aaaataagcatagatccggngnattcccaaataggtcaaccttttaaactgcctgctgaa 63 ||||||| ||||||||||| | |||||| ||||||| ||||||| ||||||| |||| | Sbjct: 88 aaaataaacatagatccggag-attcccgaataggtaaacctttaaaactgc-tgcttat 145 Query: 64 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 123 |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| Sbjct: 146 tccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaat 203 Query: 124 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 166 |||||||||| |||||| |||||| ||||| ||||| ||||| Sbjct: 204 aaagcaaaagttattcccatagtagtggcgaacgaaaagggag 246 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 483 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 542 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 543 gg 544 || Sbjct: 602 gg 603
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 6e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgt 448 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 73 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 132 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 133 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 177 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 485 ctgaccgcgtgcctgttgaagaatgagccggcgact 520 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 6e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgt 448 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 96 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 155 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 156 cgaaatgggagcagcctaaacc 177 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 484 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 533 ||||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 634 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 567 gcgaaagcgagtcttaatagggcga 591 |||||||||||||| |||||||||| Sbjct: 665 gcgaaagcgagtctgaatagggcga 689
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 206 bits (104), Expect = 6e-50 Identities = 207/238 (86%), Gaps = 10/238 (4%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 474 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 475 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 532 | | || | |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 665 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 92 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 151 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 152 cgagcgaaatgggagcagcctaaacc 177 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 67.9 bits (34), Expect = 4e-08 Identities = 66/76 (86%), Gaps = 3/76 (3%) Strand = Plus / Plus Query: 555 accggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggaccc 611 ||||||||| ||||||||||||||| ||||||||| || |||||| |||||||||| Sbjct: 685 accggagcccaagcgaaagcgagtctgaatagggcgcttatagtcactttttatggaccc 744 Query: 612 gaacctgggtgatcta 627 ||||| |||||||||| Sbjct: 745 gaacccgggtgatcta 760
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 202 bits (102), Expect = 1e-48 Identities = 217/248 (87%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 415 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 416 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 475 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 476 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 535 ||| | |||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgacttataagaagtggcca 674 Query: 536 ggttaagg 543 |||||||| Sbjct: 675 ggttaagg 682 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 77 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 136 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 137 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 178 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/74 (86%), Gaps = 2/74 (2%) Strand = Plus / Plus Query: 556 ccggagccgtagcgaaagcgagtcttaatagggcgattg--tcactgcttatggacccga 613 |||||||| ||||||||| ||||| ||||||||| || ||||| ||||||||||||| Sbjct: 691 ccggagcctaagcgaaagcaagtctgaatagggcgtatgagtcacttcttatggacccga 750 Query: 614 acctgggtgatcta 627 ||| |||||||||| Sbjct: 751 acccgggtgatcta 764
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 1e-48 Identities = 117/122 (95%) Strand = Plus / Plus Query: 296 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 355 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 356 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 415 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 416 cc 417 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 75 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 134 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 135 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 178 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 487 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 543 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 1e-48 Identities = 135/146 (92%) Strand = Plus / Plus Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 421 tgggtagtgaaatagaacgtgaaacc 446 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 135 bits (68), Expect = 2e-28 Identities = 107/120 (89%) Strand = Plus / Plus Query: 78 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 137 ||||| ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 1929 agagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgat 1988 Query: 138 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 197 |||| |||||| ||||||||||| |||| | ||||||||||| ||| ||||||||||||| Sbjct: 1989 tcccttagtagtggcgagcgaaacgggaaccgcctaaaccgttaaagcggggttgtggga 2048
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 200 bits (101), Expect = 4e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Minus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 415 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 416 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 474 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 475 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 534 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 155604 Query: 535 tggttaagg 543 |||||||| Sbjct: 155603 gggttaagg 155595 Score = 200 bits (101), Expect = 4e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 415 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 416 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 474 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 475 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 534 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 78288 Query: 535 tggttaagg 543 |||||||| Sbjct: 78289 gggttaagg 78297 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 77 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 136 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 137 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 177 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 77 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 136 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 137 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 177 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/74 (89%), Gaps = 2/74 (2%) Strand = Plus / Minus Query: 556 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 613 |||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 155586 ccggagcccaagcgaaagcgagtctgaatagggcgatacagtcacttcttatggacccga 155527 Query: 614 acctgggtgatcta 627 |||||| ||||||| Sbjct: 155526 acctggatgatcta 155513 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/74 (89%), Gaps = 2/74 (2%) Strand = Plus / Plus Query: 556 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 613 |||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 78306 ccggagcccaagcgaaagcgagtctgaatagggcgatacagtcacttcttatggacccga 78365 Query: 614 acctgggtgatcta 627 |||||| ||||||| Sbjct: 78366 acctggatgatcta 78379
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 357 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 415 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 416 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 473 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 474 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 533 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 534 tt 535 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 96 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 155 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 156 cgaa 159 |||| Sbjct: 238 cgaa 241 Score = 48.1 bits (24), Expect = 0.035 Identities = 54/63 (85%), Gaps = 2/63 (3%) Strand = Plus / Plus Query: 567 gcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtgat 624 |||||||||||||| ||||||||| || |||| | | | |||||||||||| ||||||| Sbjct: 667 gcgaaagcgagtctgaatagggcgtttaagtcatttcctctggacccgaacccgggtgat 726 Query: 625 cta 627 ||| Sbjct: 727 cta 729
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgt 448 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 96 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 155 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 156 cgaaatgggagcagcctaaacc 177 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 485 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 533 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793 Score = 56.0 bits (28), Expect = 1e-04 Identities = 63/72 (87%), Gaps = 2/72 (2%) Strand = Plus / Plus Query: 556 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 615 |||||||| |||||||||||||||||| | ||| | |||||| ||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa-atggct-tcgtcacttcttatggacccgaac 877 Query: 616 ctgggtgatcta 627 | |||||||||| Sbjct: 878 ccgggtgatcta 889
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgt 448 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 92 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 151 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 152 cgagcgaaatgggagcagcctaaac 176 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 3e-12 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 556 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 614 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 615 cctgggtgatcta 627 || |||||||||| Sbjct: 708 cccgggtgatcta 720 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 486 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 534 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgt 448 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 92 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 151 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 152 cgagcgaaatgggagcagcctaaacc 177 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 486 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 543 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692 Score = 73.8 bits (37), Expect = 6e-10 Identities = 66/75 (88%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 556 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 612 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 701 ccggagcccaagcgaaagcgagtctgaatagggcgtaaatggtcacttcttatggacccg 760 Query: 613 aacctgggtgatcta 627 |||| |||||||||| Sbjct: 761 aacccgggtgatcta 775
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 2e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgt 448 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 96 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 155 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 156 cgaaatgggagcagcctaaacc 177 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 75.8 bits (38), Expect = 2e-10 Identities = 54/58 (93%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 485 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 541 |||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggcattggttaa 650 Score = 40.1 bits (20), Expect = 8.5 Identities = 54/65 (83%), Gaps = 4/65 (6%) Strand = Plus / Plus Query: 567 gcgaaagcgagtcttaatagggcg----attgtcactgcttatggacccgaacctgggtg 622 |||||||||||||| || |||||| |||||||| ||| |||||||||||| |||| Sbjct: 673 gcgaaagcgagtctgaaaagggcgtttatttgtcacttcttctggacccgaacccaggtg 732 Query: 623 atcta 627 ||||| Sbjct: 733 atcta 737
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 357 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 415 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 416 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 473 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 474 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 533 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 616 Query: 534 tt 535 || Sbjct: 617 tt 618 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 96 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 155 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 156 cgaa 159 |||| Sbjct: 219 cgaa 222 Score = 48.1 bits (24), Expect = 0.035 Identities = 54/63 (85%), Gaps = 2/63 (3%) Strand = Plus / Plus Query: 567 gcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtgat 624 |||||||||||||| ||||||||| || |||| | | | |||||||||||| ||||||| Sbjct: 648 gcgaaagcgagtctgaatagggcgtttaagtcatttcctctggacccgaacccgggtgat 707 Query: 625 cta 627 ||| Sbjct: 708 cta 710
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgt 448 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgt 448 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 92 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 151 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 152 cgagcgaaatgggagcagcctaaacc 177 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 92 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 151 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 152 cgagcgaaatgggagcagcctaaacc 177 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 486 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 543 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 151749 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 486 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 543 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 42454 Score = 73.8 bits (37), Expect = 6e-10 Identities = 66/75 (88%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 556 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 612 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 151740 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 151681 Query: 613 aacctgggtgatcta 627 |||| |||||||||| Sbjct: 151680 aacccgggtgatcta 151666 Score = 73.8 bits (37), Expect = 6e-10 Identities = 66/75 (88%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 556 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 612 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 42463 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 42522 Query: 613 aacctgggtgatcta 627 |||| |||||||||| Sbjct: 42523 aacccgggtgatcta 42537
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 357 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 415 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 416 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 473 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 474 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 533 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 534 tt 535 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 96 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 155 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 156 cgaa 159 |||| Sbjct: 238 cgaa 241 Score = 48.1 bits (24), Expect = 0.035 Identities = 54/63 (85%), Gaps = 2/63 (3%) Strand = Plus / Plus Query: 567 gcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtgat 624 |||||||||||||| ||||||||| || |||| | | | |||||||||||| ||||||| Sbjct: 667 gcgaaagcgagtctgaatagggcgtttaagtcatttcctctggacccgaacccgggtgat 726 Query: 625 cta 627 ||| Sbjct: 727 cta 729
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgt 448 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 92 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 151 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 152 cgagcgaaatgggagcagcctaaacc 177 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 486 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 543 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692 Score = 73.8 bits (37), Expect = 6e-10 Identities = 66/75 (88%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 556 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 612 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 701 ccggagcccaagcgaaagcgagtctgaatagggcgtaaatggtcacttcttatggacccg 760 Query: 613 aacctgggtgatcta 627 |||| |||||||||| Sbjct: 761 aacccgggtgatcta 775
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgt 448 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 92 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 151 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 152 cgagcgaaatgggagcagcctaaac 176 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 3e-12 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 556 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 614 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 615 cctgggtgatcta 627 || |||||||||| Sbjct: 708 cccgggtgatcta 720 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 486 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 534 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgt 448 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 92 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 151 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 152 cgagcgaaatgggagcagcctaaacc 177 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 486 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 543 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 626 Score = 73.8 bits (37), Expect = 6e-10 Identities = 66/75 (88%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 556 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 612 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 635 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 694 Query: 613 aacctgggtgatcta 627 |||| |||||||||| Sbjct: 695 aacccgggtgatcta 709
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgt 448 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 92 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 151 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 152 cgagcgaaatgggagcagcctaaacc 177 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 486 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 543 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 711 Score = 73.8 bits (37), Expect = 6e-10 Identities = 66/75 (88%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 556 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 612 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 720 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 779 Query: 613 aacctgggtgatcta 627 |||| |||||||||| Sbjct: 780 aacccgggtgatcta 794
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 196 bits (99), Expect = 6e-47 Identities = 197/229 (86%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 300 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 359 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 360 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 419 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 420 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 479 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 480 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 528 | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 417 ccagtgggtagtgaaatagaacgtgaaacc 446 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 92 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 151 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 152 cgagcgaaatgggagcagcctaaacc 177 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 485 ctgaccgcgtgcctgttgaagaatgagccggcgact 520 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 556 ccggagccgtagcgaaagcgagtcttaatagggcgat 592 ||||||||| ||||||||| ||||| ||||||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgat 657
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 405 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 464 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 465 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 514 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 421 tgggtagtgaaatagaacgtgaaacc 446 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 155 bits (78), Expect = 2e-34 Identities = 111/122 (90%) Strand = Plus / Plus Query: 78 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 137 ||||| ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 162 agagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgat 221 Query: 138 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 197 |||| |||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||| Sbjct: 222 tcccttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtggga 281 Query: 198 ga 199 || Sbjct: 282 ga 283 Score = 147 bits (74), Expect = 5e-32 Identities = 126/142 (88%), Gaps = 6/142 (4%) Strand = Plus / Plus Query: 486 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 545 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 546 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 605 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 606 ggacccgaacctgggtgatcta 627 ||||||||||| |||||||||| Sbjct: 681 ggacccgaacccgggtgatcta 702
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 301 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 360 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 361 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 420 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 421 tgggtagtgaaatagaacgtgaaacc 446 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 155 bits (78), Expect = 2e-34 Identities = 111/122 (90%) Strand = Plus / Plus Query: 78 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 137 ||||| ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 3196 agagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgat 3255 Query: 138 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 197 |||| |||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||| Sbjct: 3256 tcccttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtggga 3315 Query: 198 ga 199 || Sbjct: 3316 ga 3317 Score = 147 bits (74), Expect = 5e-32 Identities = 126/142 (88%), Gaps = 6/142 (4%) Strand = Plus / Plus Query: 486 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 545 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 546 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 605 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 3661 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 3714 Query: 606 ggacccgaacctgggtgatcta 627 ||||||||||| |||||||||| Sbjct: 3715 ggacccgaacccgggtgatcta 3736
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 417 ccagtgggtagtgaaatagaacgtgaaacc 446 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 92 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 151 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 152 cgagcgaaatgggagcagcctaaacc 177 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 485 ctgaccgcgtgcctgttgaagaatgagccggcgact 520 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 556 ccggagccgtagcgaaagcgagtcttaatagggcgat 592 ||||||||| ||||||||| ||||| ||||||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgat 25466
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 1e-45 Identities = 136/149 (91%) Strand = Plus / Plus Query: 300 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 359 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 360 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 419 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 420 gtgggtagtgaaatagaacgtgaaaccgt 448 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 493 gtgcctgttgaagaatgagccggcgactcatagg 526 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 1e-45 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 415 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 416 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 475 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 476 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 520 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 77 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 136 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 137 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 178 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 602 ttatggacccgaacctgggtgatcta 627 ||||||||||||||| |||||||||| Sbjct: 804 ttatggacccgaacccgggtgatcta 829
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgt 448 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 92 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 151 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 152 cgagcgaaatgggagcagcctaaacc 177 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 486 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 543 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635 Score = 73.8 bits (37), Expect = 6e-10 Identities = 66/75 (88%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 556 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 612 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 703 Query: 613 aacctgggtgatcta 627 |||| |||||||||| Sbjct: 704 aacccgggtgatcta 718
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 190 bits (96), Expect = 4e-45 Identities = 213/248 (85%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 476 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 477 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 535 ||| | || ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaa 799 Query: 536 ggttaagg 543 |||||||| Sbjct: 800 ggttaagg 807 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 78 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 137 |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 199 Query: 138 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 177 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 200 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%), Gaps = 5/77 (6%) Strand = Plus / Plus Query: 556 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 610 |||||||| ||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacc 875 Query: 611 cgaacctgggtgatcta 627 |||||| |||||||||| Sbjct: 876 cgaacccgggtgatcta 892
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgt 448 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 92 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 151 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 152 cgagcgaaatgggagcagcctaaacc 177 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 486 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 544 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/70 (88%), Gaps = 2/70 (2%) Strand = Plus / Plus Query: 560 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacct 617 |||| |||||||||||||||| ||||||||| | |||||| |||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 618 gggtgatcta 627 |||||||||| Sbjct: 716 gggtgatcta 725
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 472 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 472 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 78 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 137 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 138 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 178 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 78 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 137 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 138 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 178 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 485 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 543 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 170883 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 485 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 543 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 122043 Score = 40.1 bits (20), Expect = 8.5 Identities = 59/72 (81%) Strand = Plus / Minus Query: 556 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 615 |||||||| ||||||||||||||| | ||||| ||||||| | || ||||||||| Sbjct: 170874 ccggagccagagcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaac 170815 Query: 616 ctgggtgatcta 627 | |||||||||| Sbjct: 170814 ccgggtgatcta 170803 Score = 40.1 bits (20), Expect = 8.5 Identities = 59/72 (81%) Strand = Plus / Plus Query: 556 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 615 |||||||| ||||||||||||||| | ||||| ||||||| | || ||||||||| Sbjct: 122052 ccggagccagagcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaac 122111 Query: 616 ctgggtgatcta 627 | |||||||||| Sbjct: 122112 ccgggtgatcta 122123
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 472 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 78 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 137 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 138 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 178 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 485 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 543 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 634 Score = 40.1 bits (20), Expect = 8.5 Identities = 59/72 (81%) Strand = Plus / Plus Query: 556 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 615 |||||||| ||||||||||||||| | ||||| ||||||| | || ||||||||| Sbjct: 643 ccggagccagagcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaac 702 Query: 616 ctgggtgatcta 627 | |||||||||| Sbjct: 703 ccgggtgatcta 714
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 415 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 416 cccagtgggtagtgaaatagaacgtgaaaccgt 448 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 131 bits (66), Expect = 3e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 77 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 136 |||||| |||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagagataacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 137 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 178 ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatgggaacagcctaaaccg 249 Score = 121 bits (61), Expect = 3e-24 Identities = 125/145 (86%), Gaps = 6/145 (4%) Strand = Plus / Plus Query: 485 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 544 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagg- 687 Query: 545 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga--ttgtcactgct 602 ||| | |||||||| ||||||||| |||||||||||||||| |||||||| | Sbjct: 688 ---agaatcatccggagccagagcgaaagcaagtcttaatagggcgattttgtcactttt 744 Query: 603 tatggacccgaacctgggtgatcta 627 |||||||||||||| |||||||||| Sbjct: 745 tatggacccgaacccgggtgatcta 769
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 182 bits (92), Expect = 9e-43 Identities = 203/234 (86%), Gaps = 12/234 (5%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 415 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 416 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 472 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 473 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 526 | ||| || |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 608 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Plus Query: 90 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 149 ||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 155 gcgaattgaaacatcttagtagctgaaggaaaagaaagcaaaagcgattcccaaagtagc 214 Query: 150 ggcgagcgaaatgggagcagcctaaac 176 |||||||| ||||||| |||||||||| Sbjct: 215 ggcgagcggaatgggaacagcctaaac 241 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand = Plus / Plus Query: 566 agcgaaagcgagtcttaatagggcgat--tgtcactgcttatggacccgaacctgggtga 623 ||||||||||||||| ||||||||| | ||||| | ||||||||||||||||||| ||| Sbjct: 643 agcgaaagcgagtctgaatagggcgctaatgtcatttcttatggacccgaacctggatga 702 Query: 624 tcta 627 |||| Sbjct: 703 tcta 706
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgt 448 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 137 bits (69), Expect = 5e-29 Identities = 132/153 (86%) Strand = Plus / Plus Query: 26 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 85 |||||| |||||| ||||||| || ||| |||| ||||| ||| |||| ||||||||| Sbjct: 97 attcccgaatagggcaaccttatatacttcctgttgaattcatagacaggtaagagacaa 156 Query: 86 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 145 || |||||| |||||||||||||||||| | ||||||||||||||| ||||||||| ||| Sbjct: 157 cccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattcccttag 216 Query: 146 tagcggcgagcgaaatgggagcagcctaaaccg 178 ||| ||||||||||| |||| ||| |||||||| Sbjct: 217 tagtggcgagcgaaaagggatcagtctaaaccg 249 Score = 111 bits (56), Expect = 3e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 484 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 543 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 555 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 614 ||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaa 681 Query: 615 cctgggtgatcta 627 || |||||||||| Sbjct: 682 cccgggtgatcta 694
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 417 ccagtgggtagtgaaatagaacgtgaaacc 446 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 485 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 543 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 92 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 151 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 174 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 233 Query: 152 cgagcgaaatgggagcagcctaaacc 177 ||| |||| |||| |||||||||| Sbjct: 234 cgaacgaaccgggattagcctaaacc 259 Score = 77.8 bits (39), Expect = 4e-11 Identities = 59/65 (90%), Gaps = 3/65 (4%) Strand = Plus / Plus Query: 566 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaacctgggtg 622 ||||||||||||||||||||||||| || |||||| |||||||||||||||| ||||| Sbjct: 659 agcgaaagcgagtcttaatagggcgtaaatggtcacttcttatggacccgaacccgggtg 718 Query: 623 atcta 627 ||||| Sbjct: 719 atcta 723
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 417 ccagtgggtagtgaaatagaacgtgaaacc 446 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 92 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 151 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 152 cgagcgaaatgggagcagcctaaacc 177 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 485 ctgaccgcgtgcctgttgaagaatgagccggcgact 520 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 417 ccagtgggtagtgaaatagaacgtgaaacc 446 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 485 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 543 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 92 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 151 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 174 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 233 Query: 152 cgagcgaaatgggagcagcctaaacc 177 ||| |||| |||| |||||||||| Sbjct: 234 cgaacgaaccgggattagcctaaacc 259 Score = 77.8 bits (39), Expect = 4e-11 Identities = 59/65 (90%), Gaps = 3/65 (4%) Strand = Plus / Plus Query: 566 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaacctgggtg 622 ||||||||||||||||||||||||| || |||||| |||||||||||||||| ||||| Sbjct: 659 agcgaaagcgagtcttaatagggcgtaaatggtcacttcttatggacccgaacccgggtg 718 Query: 623 atcta 627 ||||| Sbjct: 719 atcta 723
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 178 bits (90), Expect = 1e-41 Identities = 210/246 (85%), Gaps = 8/246 (3%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||| |||||||||| |||||||||||||| ||| |||||||||| | ||||| Sbjct: 498 cccgagtagctaggggcacgtgaaatcccgtgtgaatgagcgaggaccacctcgtaaggc 557 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 ||||||||||| |||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 558 taaatactcctaggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 617 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-ga 475 | ||| ||||||| ||||| |||||||| | |||| ||||||||||||||| || Sbjct: 618 ctgtaggggagtgaaacagaacatgaaaccg---taagctgtcaagcagtgggagggcga 674 Query: 476 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 535 || | | |||||||||||||||||||||||||||||||||||| ||||| |||||| | Sbjct: 675 aa---agc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcgt 730 Query: 536 ggttaa 541 |||||| Sbjct: 731 ggttaa 736 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 97 gaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagc 156 |||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 280 gaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccttagtagcggcgagc 339 Query: 157 gaaatgggagcagcctaaacc 177 ||||| | ||||||||||| Sbjct: 340 gaaatcccaacagcctaaacc 360
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 6e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 300 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 359 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 360 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 419 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 420 gtgggtagtgaaatagaacgtgaaaccgt 448 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 484 tctgaccgcgtgcctgttgaagaatgagccggcga 518 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 566 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 625 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 626 ta 627 || Sbjct: 322 ta 323
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 6e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 417 ccagt-gggtagtgaaatagaacgtgaaaccgt 448 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 77 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 136 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 137 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 178 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 89.7 bits (45), Expect = 1e-14 Identities = 118/142 (83%), Gaps = 4/142 (2%) Strand = Plus / Plus Query: 486 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 545 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaaggaa 773 Query: 546 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 605 || |||||||| ||||||||| |||||||||||||| |||||| |||| Sbjct: 774 ----aaaaatccggagccaaagcgaaagcaagtcttaatagggctcaggtcactctttat 829 Query: 606 ggacccgaacctgggtgatcta 627 ||||||||||| |||||||||| Sbjct: 830 ggacccgaacccgggtgatcta 851
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtg 449 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 90 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 149 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 150 ggcgagcgaaatgggagcagcctaaacc 177 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 558 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 617 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 618 gggtgatcta 627 |||||||||| Sbjct: 532 gggtgatcta 541 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 486 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 526 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtg 449 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 90 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 149 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 150 ggcgagcgaaatgggagcagcctaaacc 177 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 558 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 617 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 618 gggtgatcta 627 |||||||||| Sbjct: 532 gggtgatcta 541 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 486 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 526 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtg 449 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 558 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 617 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 618 gggtgatcta 627 |||||||||| Sbjct: 545 gggtgatcta 554 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 93 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 152 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 153 gagcgaaatgggagcagcctaaacc 177 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 486 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 533 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtg 449 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 558 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 617 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 618 gggtgatcta 627 |||||||||| Sbjct: 545 gggtgatcta 554 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 90 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 149 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 150 ggcgagcgaaatgggagcagcctaaacc 177 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 486 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 533 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtg 449 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 90 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 149 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 150 ggcgagcgaaatgggagcagcctaaacc 177 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 558 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 617 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 618 gggtgatcta 627 |||||||||| Sbjct: 532 gggtgatcta 541 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 486 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 526 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtg 449 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 558 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 617 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 618 gggtgatcta 627 |||||||||| Sbjct: 545 gggtgatcta 554 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 90 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 149 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 150 ggcgagcgaaatgggagcagcctaaacc 177 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 486 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 533 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtg 449 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 558 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 617 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 618 gggtgatcta 627 |||||||||| Sbjct: 545 gggtgatcta 554 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 90 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 149 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 150 ggcgagcgaaatgggagcagcctaaacc 177 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 486 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 533 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 297 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 356 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 357 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 416 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 417 ccagtgggtagtgaaatagaacgtgaaaccgtg 449 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 558 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 617 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 618 gggtgatcta 627 |||||||||| Sbjct: 545 gggtgatcta 554 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 90 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 149 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 150 ggcgagcgaaatgggagcagcctaaacc 177 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 486 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 533 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 176 bits (89), Expect = 6e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 296 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 355 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 365 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 424 Query: 356 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 415 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 425 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 484 Query: 416 c 416 | Sbjct: 485 c 485 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 83 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 142 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 143 tagtagcggcgagcgaaatgggagcagcctaaaccg 178 |||||||||||||||| |||| |||||||||||| Sbjct: 210 cagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 485 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 533 ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcggtggc 599 Score = 44.1 bits (22), Expect = 0.55 Identities = 43/50 (86%) Strand = Plus / Plus Query: 219 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 268 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 287 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 336 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,137,397 Number of Sequences: 3902068 Number of extensions: 4137397 Number of successful extensions: 123122 Number of sequences better than 10.0: 26592 Number of HSP's better than 10.0 without gapping: 26421 Number of HSP's successfully gapped in prelim test: 206 Number of HSP's that attempted gapping in prelim test: 76883 Number of HSP's gapped (non-prelim): 44080 length of query: 627 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 604 effective length of database: 17,143,297,704 effective search space: 10354551813216 effective search space used: 10354551813216 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
