>ref|XM_475987.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1023

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 131/162 (80%)
 Strand = Plus / Plus

                                                                       
Query: 57  ctgggttcttgtcgcaggaggagtccttctgagcactctttcagtcagatttgggtgcaa 116
           |||||||||||| |||||||||||  | || ||||| || ||||||||| ||||||||||
Sbjct: 72  ctgggttcttgttgcaggaggagttttacttagcacactgtcagtcagacttgggtgcaa 131

                                                                       
Query: 117 gctgaagcaaatgtttgataccaagaagcaaaataatacctccagagcgaaaagaagaca 176
             | ||||||||||| ||| | ||||||||||| | ||   ||| ||  |||||||| | 
Sbjct: 132 attaaagcaaatgttcgatgcaaagaagcaaaacagtatgcccaaagtaaaaagaaggcc 191

                                                     
Query: 177 tggatcttgtgaactgcactccaatctgtaccggtttgatga 218
           |||  | ||||| |||||||| ||||| ||||||||| ||||
Sbjct: 192 tggggcatgtgatctgcactcgaatctctaccggtttaatga 233

>dbj|AK102121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084N12, full
           insert sequence
          Length = 1582

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 131/162 (80%)
 Strand = Plus / Plus

                                                                       
Query: 57  ctgggttcttgtcgcaggaggagtccttctgagcactctttcagtcagatttgggtgcaa 116
           |||||||||||| |||||||||||  | || ||||| || ||||||||| ||||||||||
Sbjct: 322 ctgggttcttgttgcaggaggagttttacttagcacactgtcagtcagacttgggtgcaa 381

                                                                       
Query: 117 gctgaagcaaatgtttgataccaagaagcaaaataatacctccagagcgaaaagaagaca 176
             | ||||||||||| ||| | ||||||||||| | ||   ||| ||  |||||||| | 
Sbjct: 382 attaaagcaaatgttcgatgcaaagaagcaaaacagtatgcccaaagtaaaaagaaggcc 441

                                                     
Query: 177 tggatcttgtgaactgcactccaatctgtaccggtttgatga 218
           |||  | ||||| |||||||| ||||| ||||||||| ||||
Sbjct: 442 tggggcatgtgatctgcactcgaatctctaccggtttaatga 483

>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05,
             complete sequence
          Length = 108479

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                         
Query: 57    ctgggttcttgtcgcaggaggagtccttctgagcactctttcagtcagatttgggtgcaa 116
             |||||||||||| |||||||||||  | || ||||| || ||||||||| ||||||||||
Sbjct: 63517 ctgggttcttgttgcaggaggagttttacttagcacactgtcagtcagacttgggtgcaa 63458

                                              
Query: 117   gctgaagcaaatgtttgataccaagaagcaaaa 149
               | ||||||||||| ||| | |||||||||||
Sbjct: 63457 attaaagcaaatgttcgatgcaaagaagcaaaa 63425

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                            
Query: 57       ctgggttcttgtcgcaggaggagtccttctgagcactctttcagtcagatttgggtgcaa 116
                |||||||||||| |||||||||||  | || ||||| || ||||||||| ||||||||||
Sbjct: 29053462 ctgggttcttgttgcaggaggagttttacttagcacactgtcagtcagacttgggtgcaa 29053403

                                                 
Query: 117      gctgaagcaaatgtttgataccaagaagcaaaa 149
                  | ||||||||||| ||| | |||||||||||
Sbjct: 29053402 attaaagcaaatgttcgatgcaaagaagcaaaa 29053370

>gb|AC132479.2| Homo sapiens BAC clone RP11-769N11 from 2, complete sequence
          Length = 168824

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 183   ttgtgaactgcactccaatctg 204
             ||||||||||||||||||||||
Sbjct: 84910 ttgtgaactgcactccaatctg 84931

>gb|AC068137.8| Homo sapiens BAC clone RP11-803A13 from 2, complete sequence
          Length = 166719

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 183  ttgtgaactgcactccaatctg 204
            ||||||||||||||||||||||
Sbjct: 7402 ttgtgaactgcactccaatctg 7381

>gb|AC140481.3| Homo sapiens BAC clone RP11-1216L17 from 2, complete sequence
          Length = 219471

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 183   ttgtgaactgcactccaatctg 204
             ||||||||||||||||||||||
Sbjct: 78086 ttgtgaactgcactccaatctg 78107

>gb|AC145760.3| Microcebus murinus clone CH257-514K9, complete sequence
          Length = 271789

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 135    taccaagaagcaaaataatac 155
              |||||||||||||||||||||
Sbjct: 176054 taccaagaagcaaaataatac 176034

>gb|AC092817.2| Homo sapiens chromosome 8, clone RP11-240B13, complete sequence
          Length = 168719

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 241    gtctcagatggtggagtggaa 261
              |||||||||||||||||||||
Sbjct: 152595 gtctcagatggtggagtggaa 152575

>gb|DP000022.1| Microcebus murinus target 1 genomic scaffold
          Length = 1595145

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 135     taccaagaagcaaaataatac 155
               |||||||||||||||||||||
Sbjct: 1050510 taccaagaagcaaaataatac 1050490

>gb|AC158968.3| Mus musculus chromosome 1, clone RP23-411D16, complete sequence
          Length = 183663

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 134    ataccaagaagcaaaataat 153
              ||||||||||||||||||||
Sbjct: 106553 ataccaagaagcaaaataat 106572

>ref|XM_765667.1| Giardia lamblia ATCC 50803 hypothetical protein
           (GLP_609_54056_52506) partial mRNA
          Length = 1551

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 caagctgaagcaaatgtttg 133
           ||||||||||||||||||||
Sbjct: 129 caagctgaagcaaatgtttg 148

>ref|XM_765668.1| Giardia lamblia ATCC 50803 hypothetical protein
           (GLP_609_53613_54074) partial mRNA
          Length = 462

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 114 caagctgaagcaaatgtttg 133
           ||||||||||||||||||||
Sbjct: 316 caagctgaagcaaatgtttg 297

>gb|AC142300.1| Pan troglodytes BAC clone RP43-127J18 from 7, complete sequence
          Length = 142598

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 83    ttctgagcactctttcagtcagat 106
             ||||||||||||||||||| ||||
Sbjct: 34040 ttctgagcactctttcagtaagat 34063

>emb|AL591846.15| Human DNA sequence from clone RP11-343H5 on chromosome 1 Contains the
            LGTN gene for ligatin, the DYRK3 gene for
            dual-specificity tyrosine-(Y)-phosphorylation regulated
            kinase 3, a novel gene, the MAPKAPK2 gene for
            mitogen-activated protein kinase-activated protein kinase
            2, a ribosomal protein S14 (RPS14) pseudogene and a CpG
            island, complete sequence
          Length = 195485

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 154  acctccagagcgaaaagaagacat 177
            ||||||||||| ||||||||||||
Sbjct: 7038 acctccagagctaaaagaagacat 7061

>emb|BX957222.1| Methanococcus maripaludis S2 complete genome; segment 4/5
          Length = 349607

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 158    ccagagcgaaaagaagacatggat 181
              ||||| ||||||||||||||||||
Sbjct: 170536 ccagaacgaaaagaagacatggat 170559

>gb|AF143332.1| Musa acuminata retrotransposon monkey sequence
          Length = 6369

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 211  tttgatgatgaaaccaattg 230
            ||||||||||||||||||||
Sbjct: 5928 tttgatgatgaaaccaattg 5909

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                            
Query: 57       ctgggttcttgtcgcaggaggagtccttctgagcactctttcagtcagatttgggtgcaa 116
                |||||||||||| || ||||||||  | |||||||| || ||||| | | ||||||||||
Sbjct: 22467145 ctgggttcttgttgcgggaggagttttgctgagcacactctcagttaaacttgggtgcaa 22467086

>gb|AC079907.25| Homo sapiens 12q BAC RP11-554E23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 184840

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    ccatgcccagggagaagggc 52
             ||||||||||||||||||||
Sbjct: 54937 ccatgcccagggagaagggc 54956

>dbj|AP005800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0016D04
          Length = 147313

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                         
Query: 57    ctgggttcttgtcgcaggaggagtccttctgagcactctttcagtcagatttgggtgcaa 116
             |||||||||||| || ||||||||  | |||||||| || ||||| | | ||||||||||
Sbjct: 37501 ctgggttcttgttgcgggaggagttttgctgagcacactctcagttaaacttgggtgcaa 37442

>dbj|AK068936.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003F10, full
           insert sequence
          Length = 1730

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 57  ctgggttcttgtcgcaggaggagtccttctgagcactctttcagtcagatttgggtgcaa 116
           |||||||||||| || ||||||||  | |||||||| || ||||| | | ||||||||||
Sbjct: 362 ctgggttcttgttgcgggaggagttttgctgagcacactctcagttaaacttgggtgcaa 421

>gb|AC118935.7| Mus musculus chromosome 5, clone RP24-172P15, complete sequence
          Length = 168119

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   gaaaagaagacatggatctt 184
             ||||||||||||||||||||
Sbjct: 84556 gaaaagaagacatggatctt 84537

>gb|AC138285.8| Mus musculus chromosome 1, clone RP24-383G22, complete sequence
          Length = 216104

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 134  ataccaagaagcaaaataat 153
            ||||||||||||||||||||
Sbjct: 9065 ataccaagaagcaaaataat 9084


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,939,431
Number of Sequences: 3902068
Number of extensions: 3939431
Number of successful extensions: 57263
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57195
Number of HSP's gapped (non-prelim): 68
length of query: 304
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 282
effective length of database: 17,147,199,772
effective search space: 4835510335704
effective search space used: 4835510335704
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)