ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd27c11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_482983.1| Oryza sativa (japonica cultivar-group), mRNA 287 2e-74
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 287 2e-74
3dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic D... 287 2e-74
4dbj|AP004643.3| Oryza sativa (japonica cultivar-group) genomic D... 287 2e-74
5dbj|AK101591.1| Oryza sativa (japonica cultivar-group) cDNA clon... 287 2e-74
6gb|AY105229.1| Zea mays PCO122908 mRNA sequence 285 6e-74
7ref|XM_482982.1| Oryza sativa (japonica cultivar-group), mRNA 163 6e-37
8dbj|AK065513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 6e-37
9gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequ... 46 0.10
10gb|AY632421.1| Streptomyces viridochromogenes PTT biosynthetic gene 44 0.40
11gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 44 0.40
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.40
13gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare str... 44 0.40
14emb|X65195.2|SVPTT Streptomyces viridochromogenes strain Tue494 ... 44 0.40
15dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
16gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.40
17dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 44 0.40
18dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 44 0.40
19dbj|AK070827.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.40
20gb|AE015451.1| Pseudomonas putida KT2440 complete genome 44 0.40
21ref|NM_184549.2| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
22ref|XM_463821.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
23ref|NM_193534.1| Oryza sativa (japonica cultivar-group), predic... 42 1.6
24ref|XM_592546.2| PREDICTED: Bos taurus similar to TGF beta recep... 42 1.6
25gb|AY340220.1| Oryza sativa (japonica cultivar-group) hydroperox... 42 1.6
26emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.6
27emb|BX640430.1| Bordetella parapertussis strain 12822, complete ... 42 1.6
28emb|BX640421.1| Bordetella pertussis strain Tohama I, complete g... 42 1.6
29emb|AJ132742.1|BBR132742 Bordetella bronchiseptica metY (partial... 42 1.6
30dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
31dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
32dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
33dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
34dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.6
35gb|AE004578.1| Pseudomonas aeruginosa PAO1, section 139 of 529 o... 42 1.6
36gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.6
37dbj|AP005881.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
38dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
39dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
40dbj|AP003075.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
41dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
42dbj|AK120051.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
43dbj|AK105694.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
44dbj|AK100012.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
45dbj|AK061217.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
46gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 6.3
47ref|XM_483520.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
48ref|NM_187472.1| Oryza sativa (japonica cultivar-group), predic... 40 6.3
49ref|XM_469869.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
50ref|NM_001008991.1| Pan troglodytes aldehyde dehydrogenase 5 fam... 40 6.3
51ref|XM_469487.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
52ref|NM_001080.3| Homo sapiens aldehyde dehydrogenase 5 family, m... 40 6.3
53ref|NM_170740.1| Homo sapiens aldehyde dehydrogenase 5 family, m... 40 6.3
54gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 6.3
55gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
56ref|XM_718359.1| Candida albicans SC5314 putative ARGR transcrip... 40 6.3
57ref|XM_718170.1| Candida albicans SC5314 putative ARGR transcrip... 40 6.3
58emb|AJ891038.1| Hylobates lar mRNA for succinic semialdehyde deh... 40 6.3
59emb|AJ891037.1| Pan paniscus mRNA for succinic semialdehyde dehy... 40 6.3
60emb|AM040225.1| Camellia sinensis putative Ty1-copia retrotransp... 40 6.3
61emb|AL772197.12| Human DNA sequence from clone RP11-24O6 on chro... 40 6.3
62emb|AL031230.1|HS73M23 Human DNA sequence from clone RP1-73M23 o... 40 6.3
63emb|CR942205.4| Human DNA sequence from clone RP11-948M1 on chro... 40 6.3
64emb|Y16952.3|AME16952 Amycolatopsis balhimycina biosynthetic gen... 40 6.3
65emb|Y11192.1|HSNDSSADH Homo sapiens mRNA for succinic semialdehy... 40 6.3
66gb|CP000088.1| Thermobifida fusca YX, complete genome 40 6.3
67emb|X53957.1|TAFBP1 Wheat FBP gene for chloroplast fructose-1,6-... 40 6.3
68emb|X07780.1|TAFBP Wheat mRNA for fructose-1,6-bisphosphatase (E... 40 6.3
69emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 6.3
70gb|BC034321.1| Homo sapiens aldehyde dehydrogenase 5 family, mem... 40 6.3
71emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete ... 40 6.3
72emb|AJ427354.2|HSA427354 Homo sapiens partial mRNA for succinic ... 40 6.3
73emb|AJ000264.1|SGJ000264 Streptomyces granaticolor gene encoding... 40 6.3
74gb|DQ432066.1| Amycolatopsis mediterranei glnR operon, partial s... 40 6.3
75emb|AJ621752.1| Pan troglodytes mRNA for succinic semialdehyde d... 40 6.3
76emb|AJ621751.1| Gorilla gorilla mRNA for succinic semialdehyde d... 40 6.3
77gb|AC090713.6| Oryza sativa chromosome 3 BAC OSJNBa0002J24 genom... 40 6.3
78gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.3
79gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 6.3
80gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
81gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
82gb|AC008168.3| Homo sapiens BAC clone RP11-178F7 from 2, complet... 40 6.3
83gb|AE004544.1| Pseudomonas aeruginosa PAO1, section 105 of 529 o... 40 6.3
84gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 6.3
85ref|XM_238103.3| PREDICTED: Rattus norvegicus AKT1 substrate 1 (... 40 6.3
86emb|AJ427355.2|HSA427355 Homo sapiens mRNA for succinic semialde... 40 6.3
87gb|AF217189.1|AF217189 Sorangium cellulosum putative transposase... 40 6.3
88dbj|AP005528.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
89dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.3
90dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
91emb|Z70524.1|SPPDR5ABC S.polyrrhiza mRNA for PDR5-like ABC trans... 40 6.3
92gb|AF210843.1|AF210843 Sorangium cellulosum strain So ce90 epoth... 40 6.3
93dbj|AK103002.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
94emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 6.3
95dbj|AK065449.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
96dbj|AK065201.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
97dbj|AK062233.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
98gb|L34820.1|HUMSSADH Human NAD+-dependent succinate-semialdehyde... 40 6.3
99dbj|AB007194.1| Oryza sativa mRNA for fructose-1,6-bisphosphatas... 40 6.3 
>ref|XM_482983.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2332

 Score =  287 bits (145), Expect = 2e-74
 Identities = 255/291 (87%), Gaps = 3/291 (1%)
 Strand = Plus / Plus

                                                                       
Query: 61  gatgttggaggagctgctgatcttcacgcggggcgggctgatcctgtggtcgtcctgccg 120
           |||||||||||||||||| ||||||||||| ||||| || ||||| |||||||| |||||
Sbjct: 153 gatgttggaggagctgctcatcttcacgcgcggcggcctcatcctctggtcgtcatgccg 212

                                                                       
Query: 121 ggccctgggcggggcggcgctgctcaagggctcccccatcgacgcgctcatccgctcctg 180
           ||| || ||||| || ||    ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 213 ggcgctcggcggcgccgc---cctcaagggctcgcccatcgacgccctcatccgctcctg 269

                                                                       
Query: 181 cctgctcgaggagcgctcgggcgacgccggattcacccaggacgcctacgcgctcaagtg 240
           ||| |||||||||||||| | ||||||| | ||| |||||||| |||| ||||| |||||
Sbjct: 270 cctcctcgaggagcgctctgccgacgccagcttctcccaggacacctatgcgcttaagtg 329

                                                                       
Query: 241 gaccttcaacaacgacctcggcctcgtcttcgtcgccgtataccagcgcatgctccacct 300
           |||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 330 gacctttaacaatgacctcggcctcgtgttcgtcgccgtttaccagcgcatgctccacct 389

                                                              
Query: 301 gctctacgtcgacgacctgctcgccgccgtccgcagggacttctcccagat 351
            || |||||||||||||| |||||||||||||| | ||| ||||| |||||
Sbjct: 390 cctttacgtcgacgacctcctcgccgccgtccgtaaggagttctcacagat 440
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  287 bits (145), Expect = 2e-74
 Identities = 255/291 (87%), Gaps = 3/291 (1%)
 Strand = Plus / Minus

                                                                            
Query: 61       gatgttggaggagctgctgatcttcacgcggggcgggctgatcctgtggtcgtcctgccg 120
                |||||||||||||||||| ||||||||||| ||||| || ||||| |||||||| |||||
Sbjct: 23714255 gatgttggaggagctgctcatcttcacgcgcggcggcctcatcctctggtcgtcatgccg 23714196

                                                                            
Query: 121      ggccctgggcggggcggcgctgctcaagggctcccccatcgacgcgctcatccgctcctg 180
                ||| || ||||| || ||    ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 23714195 ggcgctcggcggcgccgc---cctcaagggctcgcccatcgacgccctcatccgctcctg 23714139

                                                                            
Query: 181      cctgctcgaggagcgctcgggcgacgccggattcacccaggacgcctacgcgctcaagtg 240
                ||| |||||||||||||| | ||||||| | ||| |||||||| |||| ||||| |||||
Sbjct: 23714138 cctcctcgaggagcgctctgccgacgccagcttctcccaggacacctatgcgcttaagtg 23714079

                                                                            
Query: 241      gaccttcaacaacgacctcggcctcgtcttcgtcgccgtataccagcgcatgctccacct 300
                |||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 23714078 gacctttaacaatgacctcggcctcgtgttcgtcgccgtttaccagcgcatgctccacct 23714019

                                                                   
Query: 301      gctctacgtcgacgacctgctcgccgccgtccgcagggacttctcccagat 351
                 || |||||||||||||| |||||||||||||| | ||| ||||| |||||
Sbjct: 23714018 cctttacgtcgacgacctcctcgccgccgtccgtaaggagttctcacagat 23713968



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 313      cgacctgctcgccgccgtcc 332
                ||||||||||||||||||||
Sbjct: 26708504 cgacctgctcgccgccgtcc 26708485
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>dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OSJNBb0092C08
          Length = 131049

 Score =  287 bits (145), Expect = 2e-74
 Identities = 255/291 (87%), Gaps = 3/291 (1%)
 Strand = Plus / Minus

                                                                        
Query: 61   gatgttggaggagctgctgatcttcacgcggggcgggctgatcctgtggtcgtcctgccg 120
            |||||||||||||||||| ||||||||||| ||||| || ||||| |||||||| |||||
Sbjct: 3455 gatgttggaggagctgctcatcttcacgcgcggcggcctcatcctctggtcgtcatgccg 3396

                                                                        
Query: 121  ggccctgggcggggcggcgctgctcaagggctcccccatcgacgcgctcatccgctcctg 180
            ||| || ||||| || ||    ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 3395 ggcgctcggcggcgccgc---cctcaagggctcgcccatcgacgccctcatccgctcctg 3339

                                                                        
Query: 181  cctgctcgaggagcgctcgggcgacgccggattcacccaggacgcctacgcgctcaagtg 240
            ||| |||||||||||||| | ||||||| | ||| |||||||| |||| ||||| |||||
Sbjct: 3338 cctcctcgaggagcgctctgccgacgccagcttctcccaggacacctatgcgcttaagtg 3279

                                                                        
Query: 241  gaccttcaacaacgacctcggcctcgtcttcgtcgccgtataccagcgcatgctccacct 300
            |||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 3278 gacctttaacaatgacctcggcctcgtgttcgtcgccgtttaccagcgcatgctccacct 3219

                                                               
Query: 301  gctctacgtcgacgacctgctcgccgccgtccgcagggacttctcccagat 351
             || |||||||||||||| |||||||||||||| | ||| ||||| |||||
Sbjct: 3218 cctttacgtcgacgacctcctcgccgccgtccgtaaggagttctcacagat 3168
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>dbj|AP004643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1113_A10
          Length = 160089

 Score =  287 bits (145), Expect = 2e-74
 Identities = 255/291 (87%), Gaps = 3/291 (1%)
 Strand = Plus / Minus

                                                                          
Query: 61     gatgttggaggagctgctgatcttcacgcggggcgggctgatcctgtggtcgtcctgccg 120
              |||||||||||||||||| ||||||||||| ||||| || ||||| |||||||| |||||
Sbjct: 121851 gatgttggaggagctgctcatcttcacgcgcggcggcctcatcctctggtcgtcatgccg 121792

                                                                          
Query: 121    ggccctgggcggggcggcgctgctcaagggctcccccatcgacgcgctcatccgctcctg 180
              ||| || ||||| || ||    ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 121791 ggcgctcggcggcgccgc---cctcaagggctcgcccatcgacgccctcatccgctcctg 121735

                                                                          
Query: 181    cctgctcgaggagcgctcgggcgacgccggattcacccaggacgcctacgcgctcaagtg 240
              ||| |||||||||||||| | ||||||| | ||| |||||||| |||| ||||| |||||
Sbjct: 121734 cctcctcgaggagcgctctgccgacgccagcttctcccaggacacctatgcgcttaagtg 121675

                                                                          
Query: 241    gaccttcaacaacgacctcggcctcgtcttcgtcgccgtataccagcgcatgctccacct 300
              |||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 121674 gacctttaacaatgacctcggcctcgtgttcgtcgccgtttaccagcgcatgctccacct 121615

                                                                 
Query: 301    gctctacgtcgacgacctgctcgccgccgtccgcagggacttctcccagat 351
               || |||||||||||||| |||||||||||||| | ||| ||||| |||||
Sbjct: 121614 cctttacgtcgacgacctcctcgccgccgtccgtaaggagttctcacagat 121564
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>dbj|AK101591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051D02, full
           insert sequence
          Length = 2331

 Score =  287 bits (145), Expect = 2e-74
 Identities = 255/291 (87%), Gaps = 3/291 (1%)
 Strand = Plus / Plus

                                                                       
Query: 61  gatgttggaggagctgctgatcttcacgcggggcgggctgatcctgtggtcgtcctgccg 120
           |||||||||||||||||| ||||||||||| ||||| || ||||| |||||||| |||||
Sbjct: 152 gatgttggaggagctgctcatcttcacgcgcggcggcctcatcctctggtcgtcatgccg 211

                                                                       
Query: 121 ggccctgggcggggcggcgctgctcaagggctcccccatcgacgcgctcatccgctcctg 180
           ||| || ||||| || ||    ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 212 ggcgctcggcggcgccgc---cctcaagggctcgcccatcgacgccctcatccgctcctg 268

                                                                       
Query: 181 cctgctcgaggagcgctcgggcgacgccggattcacccaggacgcctacgcgctcaagtg 240
           ||| |||||||||||||| | ||||||| | ||| |||||||| |||| ||||| |||||
Sbjct: 269 cctcctcgaggagcgctctgccgacgccagcttctcccaggacacctatgcgcttaagtg 328

                                                                       
Query: 241 gaccttcaacaacgacctcggcctcgtcttcgtcgccgtataccagcgcatgctccacct 300
           |||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 329 gacctttaacaatgacctcggcctcgtgttcgtcgccgtttaccagcgcatgctccacct 388

                                                              
Query: 301 gctctacgtcgacgacctgctcgccgccgtccgcagggacttctcccagat 351
            || |||||||||||||| |||||||||||||| | ||| ||||| |||||
Sbjct: 389 cctttacgtcgacgacctcctcgccgccgtccgtaaggagttctcacagat 439
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>gb|AY105229.1| Zea mays PCO122908 mRNA sequence
          Length = 946

 Score =  285 bits (144), Expect = 6e-74
 Identities = 260/298 (87%), Gaps = 3/298 (1%)
 Strand = Plus / Plus

                                                                       
Query: 66  tggaggagctgctgatcttcacgcggggcgggctgatcctgtggtcgtcctgccgggccc 125
           ||||||||||||| |||||||| |||||||| || ||||||||||||||||||||||| |
Sbjct: 234 tggaggagctgctcatcttcacccggggcggcctcatcctgtggtcgtcctgccgggcgc 293

                                                                       
Query: 126 tgggcggggcggcgctgctcaagggctcccccatcgacgcgctcatccgctcctgcctgc 185
           | ||||  || || ||   ||||||||||||||||||||| |||||||||||||| || |
Sbjct: 294 tcggcgccgcagccct---caagggctcccccatcgacgccctcatccgctcctgtctcc 350

                                                                       
Query: 186 tcgaggagcgctcgggcgacgccggattcacccaggacgcctacgcgctcaagtggacct 245
           |||||||||| || | ||||||| | ||| ||||||||   ||||| |||||||||||||
Sbjct: 351 tcgaggagcgatccgccgacgccagcttctcccaggacaattacgccctcaagtggacct 410

                                                                       
Query: 246 tcaacaacgacctcggcctcgtcttcgtcgccgtataccagcgcatgctccacctgctct 305
           || |||||||||||||||| |||||||||||||||||||||   || |||||||| ||||
Sbjct: 411 tccacaacgacctcggccttgtcttcgtcgccgtataccagaagatactccacctcctct 470

                                                                     
Query: 306 acgtcgacgacctgctcgccgccgtccgcagggacttctcccagatctacaaccccaa 363
           |||||||||| || |||||||||||||||| ||| ||||||||||||||| |||||||
Sbjct: 471 acgtcgacgatctcctcgccgccgtccgcaaggagttctcccagatctacgaccccaa 528



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                              
Query: 398 ttccgccagctgcacctcgaggccgaggcgcgcgccgaggccatgaagaag 448
           ||||||||||| |||| |||||||||||||||| ||||||  |||||||||
Sbjct: 560 ttccgccagctccaccgcgaggccgaggcgcgcaccgaggaaatgaagaag 610
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>ref|XM_482982.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2130

 Score =  163 bits (82), Expect = 6e-37
 Identities = 133/150 (88%)
 Strand = Plus / Plus

                                                                       
Query: 202 cgacgccggattcacccaggacgcctacgcgctcaagtggaccttcaacaacgacctcgg 261
           ||||||| | ||| |||||||| |||| ||||| ||||||||||| ||||| ||||||||
Sbjct: 181 cgacgccagcttctcccaggacacctatgcgcttaagtggacctttaacaatgacctcgg 240

                                                                       
Query: 262 cctcgtcttcgtcgccgtataccagcgcatgctccacctgctctacgtcgacgacctgct 321
           |||||| ||||||||||| |||||||||||||||||||| || |||||||||||||| ||
Sbjct: 241 cctcgtgttcgtcgccgtttaccagcgcatgctccacctcctttacgtcgacgacctcct 300

                                         
Query: 322 cgccgccgtccgcagggacttctcccagat 351
           |||||||||||| | ||| ||||| |||||
Sbjct: 301 cgccgccgtccgtaaggagttctcacagat 330



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 90/105 (85%), Gaps = 3/105 (2%)
 Strand = Plus / Plus

                                                                       
Query: 61  gatgttggaggagctgctgatcttcacgcggggcgggctgatcctgtggtcgtcctgccg 120
           |||||||||||||||||| ||||||||||| ||||| || ||||| |||||||| |||||
Sbjct: 85  gatgttggaggagctgctcatcttcacgcgcggcggcctcatcctctggtcgtcatgccg 144

                                                        
Query: 121 ggccctgggcggggcggcgctgctcaagggctcccccatcgacgc 165
           ||| || ||||| || ||    ||||||||||| |||||||||||
Sbjct: 145 ggcgctcggcggcgccgc---cctcaagggctcgcccatcgacgc 186
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>dbj|AK065513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033N04, full
           insert sequence
          Length = 2130

 Score =  163 bits (82), Expect = 6e-37
 Identities = 133/150 (88%)
 Strand = Plus / Plus

                                                                       
Query: 202 cgacgccggattcacccaggacgcctacgcgctcaagtggaccttcaacaacgacctcgg 261
           ||||||| | ||| |||||||| |||| ||||| ||||||||||| ||||| ||||||||
Sbjct: 181 cgacgccagcttctcccaggacacctatgcgcttaagtggacctttaacaatgacctcgg 240

                                                                       
Query: 262 cctcgtcttcgtcgccgtataccagcgcatgctccacctgctctacgtcgacgacctgct 321
           |||||| ||||||||||| |||||||||||||||||||| || |||||||||||||| ||
Sbjct: 241 cctcgtgttcgtcgccgtttaccagcgcatgctccacctcctttacgtcgacgacctcct 300

                                         
Query: 322 cgccgccgtccgcagggacttctcccagat 351
           |||||||||||| | ||| ||||| |||||
Sbjct: 301 cgccgccgtccgtaaggagttctcacagat 330



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 90/105 (85%), Gaps = 3/105 (2%)
 Strand = Plus / Plus

                                                                       
Query: 61  gatgttggaggagctgctgatcttcacgcggggcgggctgatcctgtggtcgtcctgccg 120
           |||||||||||||||||| ||||||||||| ||||| || ||||| |||||||| |||||
Sbjct: 85  gatgttggaggagctgctcatcttcacgcgcggcggcctcatcctctggtcgtcatgccg 144

                                                        
Query: 121 ggccctgggcggggcggcgctgctcaagggctcccccatcgacgc 165
           ||| || ||||| || ||    ||||||||||| |||||||||||
Sbjct: 145 ggcgctcggcggcgccgc---cctcaagggctcgcccatcgacgc 186
to top
>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 73     gctgctgatcttcacgcggggcgggct 99
              ||||||||||||||||| |||||||||
Sbjct: 340027 gctgctgatcttcacgccgggcgggct 340001
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>gb|AY632421.1| Streptomyces viridochromogenes PTT biosynthetic gene
          Length = 40241

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 296   cacctgctctacgtcgacgacctgctcgcc 325
             |||||||||| || ||||||||||||||||
Sbjct: 30962 cacctgctctccgacgacgacctgctcgcc 30991
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 414     tcgaggccgaggcgcgcgccga 435
               ||||||||||||||||||||||
Sbjct: 2407676 tcgaggccgaggcgcgcgccga 2407697
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 304     ctacgtcgacgacctgctcgcc 325
               ||||||||||||||||||||||
Sbjct: 5391058 ctacgtcgacgacctgctcgcc 5391079



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 416      gaggccgaggcgcgcgccgaggcc 439
                |||||||||||||||| |||||||
Sbjct: 31234125 gaggccgaggcgcgcggcgaggcc 31234102



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 415      cgaggccgaggcgcgcgccg 434
                ||||||||||||||||||||
Sbjct: 28271589 cgaggccgaggcgcgcgccg 28271570



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 51      cggcggcgacgatgttggaggagc 74
               |||||||| |||||||||||||||
Sbjct: 8814566 cggcggcgtcgatgttggaggagc 8814589
to top
>gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0009J13, from chromosome 3, complete sequence
          Length = 147205

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 304   ctacgtcgacgacctgctcgcc 325
             ||||||||||||||||||||||
Sbjct: 97226 ctacgtcgacgacctgctcgcc 97247
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>emb|X65195.2|SVPTT Streptomyces viridochromogenes strain Tue494 phosphinothricin
             tripeptide biosynthetic gene cluster:  ORFB1, ORFB2, ORF1,
             phsB gene, ORFM, phsC gene, pmi gene, adhP gene, ORF3,
             pgdP gene, ppm gene, ppd gene, ORFx, pgmP gene, cpps gene,
             cppm gene, aldP gene, pmet gene, pms gene, phsA gene, pat
             gene, dea gene, the1 gene, the2 gene, trs gene, prpA gene,
             ORFE1, ORFE2 and ORFE3 (partial)
          Length = 37823

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 296   cacctgctctacgtcgacgacctgctcgcc 325
             |||||||||| || ||||||||||||||||
Sbjct: 32561 cacctgctctccgacgacgacctgctcgcc 32590
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 304     ctacgtcgacgacctgctcgcc 325
               ||||||||||||||||||||||
Sbjct: 5390273 ctacgtcgacgacctgctcgcc 5390294



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 416      gaggccgaggcgcgcgccgaggcc 439
                |||||||||||||||| |||||||
Sbjct: 31324641 gaggccgaggcgcgcggcgaggcc 31324618



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 415      cgaggccgaggcgcgcgccg 434
                ||||||||||||||||||||
Sbjct: 28362913 cgaggccgaggcgcgcgccg 28362894



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 51      cggcggcgacgatgttggaggagc 74
               |||||||| |||||||||||||||
Sbjct: 8812401 cggcggcgtcgatgttggaggagc 8812424
to top
>gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006P09,
              complete sequence
          Length = 153950

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 304    ctacgtcgacgacctgctcgcc 325
              ||||||||||||||||||||||
Sbjct: 120949 ctacgtcgacgacctgctcgcc 120970
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 310     cgacgacctgctcgccgccgtc 331
               ||||||||||||||||||||||
Sbjct: 5524056 cgacgacctgctcgccgccgtc 5524077



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 310     cgacgacctgctcgccgccg 329
               ||||||||||||||||||||
Sbjct: 3836049 cgacgacctgctcgccgccg 3836030
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 310    cgacgacctgctcgccgccgtc 331
              ||||||||||||||||||||||
Sbjct: 746961 cgacgacctgctcgccgccgtc 746982
to top
>dbj|AK070827.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064N24, full
           insert sequence
          Length = 1487

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 304 ctacgtcgacgacctgctcgcc 325
           ||||||||||||||||||||||
Sbjct: 574 ctacgtcgacgacctgctcgcc 595
to top
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 121     ggccctgggcggggcggcgctgctcaaggg 150
               ||||||||| |||||||| |||||||||||
Sbjct: 2505536 ggccctgggtggggcggccctgctcaaggg 2505507
to top
>ref|NM_184549.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 5735

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 24   cagaatccattgctccccatc 44
            |||||||||||||||||||||
Sbjct: 2265 cagaatccattgctccccatc 2245
to top
>ref|XM_463821.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1742

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 307 cgtcgacgacctgctcgccgccgtc 331
           |||||||||| ||||||||||||||
Sbjct: 512 cgtcgacgacatgctcgccgccgtc 536
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>ref|NM_193534.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1308

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 413 ctcgaggccgaggcgcgcgcc 433
           |||||||||||||||||||||
Sbjct: 322 ctcgaggccgaggcgcgcgcc 342
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>ref|XM_592546.2| PREDICTED: Bos taurus similar to TGF beta receptor associated
           protein -1 (LOC514660), mRNA
          Length = 5421

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 114 cctgccgggccctgggcgggg 134
           |||||||||||||||||||||
Sbjct: 170 cctgccgggccctgggcgggg 150
to top
>gb|AY340220.1| Oryza sativa (japonica cultivar-group) hydroperoxide lyase (HPL1)
           gene, complete cds
          Length = 1731

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 307 cgtcgacgacctgctcgccgccgtc 331
           |||||||||| ||||||||||||||
Sbjct: 525 cgtcgacgacatgctcgccgccgtc 549
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>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16
          Length = 346274

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 307   cgtcgacgacctgctcgccgccgtc 331
             ||||||||||| |||||||||||||
Sbjct: 27782 cgtcgacgaccagctcgccgccgtc 27758
to top
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14
          Length = 348014

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 307    cgtcgacgacctgctcgccgccgtc 331
              ||||||||||| |||||||||||||
Sbjct: 291643 cgtcgacgaccagctcgccgccgtc 291619
to top
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12
          Length = 349726

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 307    cgtcgacgacctgctcgccgccgtc 331
              ||||||||||| |||||||||||||
Sbjct: 262729 cgtcgacgaccagctcgccgccgtc 262705
to top
>emb|AJ132742.1|BBR132742 Bordetella bronchiseptica metY (partial) and hupB genes and ORF1
          Length = 2384

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 307  cgtcgacgacctgctcgccgccgtc 331
            ||||||||||| |||||||||||||
Sbjct: 1092 cgtcgacgaccagctcgccgccgtc 1068
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 250      caacgacctcggcctcgtctt 270
                |||||||||||||||||||||
Sbjct: 10685212 caacgacctcggcctcgtctt 10685192
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 307    cgtcgacgacctgctcgccgccgtc 331
              |||||||||| ||||||||||||||
Sbjct: 555090 cgtcgacgacatgctcgccgccgtc 555114
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 413      ctcgaggccgaggcgcgcgcc 433
                |||||||||||||||||||||
Sbjct: 21389506 ctcgaggccgaggcgcgcgcc 21389486



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 24      cagaatccattgctccccatc 44
               |||||||||||||||||||||
Sbjct: 3567111 cagaatccattgctccccatc 3567131
to top
>dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0496H05
          Length = 147817

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 413    ctcgaggccgaggcgcgcgcc 433
              |||||||||||||||||||||
Sbjct: 111444 ctcgaggccgaggcgcgcgcc 111424
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 309    tcgacgacctgctcgccgccg 329
              |||||||||||||||||||||
Sbjct: 728325 tcgacgacctgctcgccgccg 728305



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 313     cgacctgctcgccgccgtcc 332
               ||||||||||||||||||||
Sbjct: 4993520 cgacctgctcgccgccgtcc 4993539
to top
>gb|AE004578.1| Pseudomonas aeruginosa PAO1, section 139 of 529 of the complete
            genome
          Length = 11684

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 418  ggccgaggcgcgcgccgaggc 438
            |||||||||||||||||||||
Sbjct: 7539 ggccgaggcgcgcgccgaggc 7559
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 120     gggccctgggcggggcggcgc 140
               |||||||||||||||||||||
Sbjct: 3850390 gggccctgggcggggcggcgc 3850370



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 414     tcgaggccgaggcgcgcgcc 433
               ||||||||||||||||||||
Sbjct: 4674337 tcgaggccgaggcgcgcgcc 4674356



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 413     ctcgaggccgaggcgcgcgc 432
               ||||||||||||||||||||
Sbjct: 3829355 ctcgaggccgaggcgcgcgc 3829374
to top
>dbj|AP005881.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBb0057I13
          Length = 156330

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 250    caacgacctcggcctcgtctt 270
              |||||||||||||||||||||
Sbjct: 137524 caacgacctcggcctcgtctt 137504
to top
>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0501G04
          Length = 156603

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 307   cgtcgacgacctgctcgccgccgtc 331
             |||||||||| ||||||||||||||
Sbjct: 33143 cgtcgacgacatgctcgccgccgtc 33167
to top
>dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OJ1276_B06
          Length = 175174

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 24     cagaatccattgctccccatc 44
              |||||||||||||||||||||
Sbjct: 135179 cagaatccattgctccccatc 135199
to top
>dbj|AP003075.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0468H06
          Length = 155031

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 413   ctcgaggccgaggcgcgcgcc 433
             |||||||||||||||||||||
Sbjct: 30892 ctcgaggccgaggcgcgcgcc 30872
to top
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0085I16
          Length = 141701

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 250   caacgacctcggcctcgtctt 270
             |||||||||||||||||||||
Sbjct: 21830 caacgacctcggcctcgtctt 21810
to top
>dbj|AK120051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000C23, full
            insert sequence
          Length = 5735

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 24   cagaatccattgctccccatc 44
            |||||||||||||||||||||
Sbjct: 2265 cagaatccattgctccccatc 2245
to top
>dbj|AK105694.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C08, full
           insert sequence
          Length = 1742

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 307 cgtcgacgacctgctcgccgccgtc 331
           |||||||||| ||||||||||||||
Sbjct: 512 cgtcgacgacatgctcgccgccgtc 536
to top
>dbj|AK100012.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013140G07, full
           insert sequence
          Length = 1646

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 307 cgtcgacgacctgctcgccgccgtc 331
           |||||||||| ||||||||||||||
Sbjct: 455 cgtcgacgacatgctcgccgccgtc 479
to top
>dbj|AK061217.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-E06, full
           insert sequence
          Length = 1421

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 413 ctcgaggccgaggcgcgcgcc 433
           |||||||||||||||||||||
Sbjct: 255 ctcgaggccgaggcgcgcgcc 275
to top
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 53      gcggcgacgatgttggaggagctg 76
               ||||| ||||||||||||||||||
Sbjct: 4087094 gcggccacgatgttggaggagctg 4087117
to top
>ref|XM_483520.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2552

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 313 cgacctgctcgccgccgtcc 332
           ||||||||||||||||||||
Sbjct: 648 cgacctgctcgccgccgtcc 667
to top
>ref|NM_187472.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1221

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 51  cggcggcgacgatgttggaggagc 74
           |||||||| |||||||||||||||
Sbjct: 568 cggcggcgtcgatgttggaggagc 545
to top
>ref|XM_469869.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 796

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 416 gaggccgaggcgcgcgccgaggcc 439
           |||||||||||||||| |||||||
Sbjct: 69  gaggccgaggcgcgcggcgaggcc 46
to top
>ref|NM_001008991.1| Pan troglodytes aldehyde dehydrogenase 5 family, member A1
            (succinate-semialdehyde dehydrogenase) (ALDH5A1), mRNA
          Length = 1638

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 430  cgccgaggccatgaagaaga 449
            ||||||||||||||||||||
Sbjct: 1080 cgccgaggccatgaagaaga 1099
to top
>ref|XM_469487.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 900

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 415 cgaggccgaggcgcgcgccg 434
           ||||||||||||||||||||
Sbjct: 314 cgaggccgaggcgcgcgccg 333
to top
>ref|NM_001080.3| Homo sapiens aldehyde dehydrogenase 5 family, member A1
            (succinate-semialdehyde dehydrogenase) (ALDH5A1), nuclear
            gene encoding mitochondrial protein, transcript variant
            2, mRNA
          Length = 5131

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 430  cgccgaggccatgaagaaga 449
            ||||||||||||||||||||
Sbjct: 1108 cgccgaggccatgaagaaga 1127
to top
>ref|NM_170740.1| Homo sapiens aldehyde dehydrogenase 5 family, member A1
            (succinate-semialdehyde dehydrogenase) (ALDH5A1), nuclear
            gene encoding mitochondrial protein, transcript variant
            1, mRNA
          Length = 5170

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 430  cgccgaggccatgaagaaga 449
            ||||||||||||||||||||
Sbjct: 1147 cgccgaggccatgaagaaga 1166
to top
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 258     tcggcctcgtcttcgtcgcc 277
               ||||||||||||||||||||
Sbjct: 6169229 tcggcctcgtcttcgtcgcc 6169248
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>gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0018H01
              map R1538, complete sequence
          Length = 142712

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 415    cgaggccgaggcgcgcgccg 434
              ||||||||||||||||||||
Sbjct: 141453 cgaggccgaggcgcgcgccg 141472
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>ref|XM_718359.1| Candida albicans SC5314 putative ARGR transcription factor
            (CaO19_4766), mRNA
          Length = 3303

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 346  ccagatctacaaccccaacc 365
            ||||||||||||||||||||
Sbjct: 2777 ccagatctacaaccccaacc 2796
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>ref|XM_718170.1| Candida albicans SC5314 putative ARGR transcription factor
            (CaO19_12230), mRNA
          Length = 3303

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 346  ccagatctacaaccccaacc 365
            ||||||||||||||||||||
Sbjct: 2777 ccagatctacaaccccaacc 2796
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>emb|AJ891038.1| Hylobates lar mRNA for succinic semialdehyde dehydrogenase precursor
            (ALDH5A1 gene)
          Length = 1638

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 430  cgccgaggccatgaagaaga 449
            ||||||||||||||||||||
Sbjct: 1080 cgccgaggccatgaagaaga 1099
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>emb|AJ891037.1| Pan paniscus mRNA for succinic semialdehyde dehydrogenase precursor
            (ALDH5A1 gene)
          Length = 1638

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 430  cgccgaggccatgaagaaga 449
            ||||||||||||||||||||
Sbjct: 1080 cgccgaggccatgaagaaga 1099
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>emb|AM040225.1| Camellia sinensis putative Ty1-copia retrotransposon, clone CsRT-51
          Length = 267

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 298 cctgctctacgtcgacgacctgct 321
           ||||||||||||||||||| ||||
Sbjct: 243 cctgctctacgtcgacgacatgct 266
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>emb|AL772197.12| Human DNA sequence from clone RP11-24O6 on chromosome X Contains the 5'
             end of the SH3KBP1 gene for SH3-domain kinase binding
             protein 1 (CIN85), two novel genes and one CpG island,
             complete sequence
          Length = 106342

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 115   ctgccgggccctgggcggggcggcgctg 142
             ||||||||| |||||| |||||||||||
Sbjct: 18312 ctgccgggcgctgggctgggcggcgctg 18285
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>emb|AL031230.1|HS73M23 Human DNA sequence from clone RP1-73M23 on chromosome 6p22.2-22.3
             Contains the 5' part of the GPLD1 gene for
             glycosylphosphatidylinositol specific phospholipase D1,
             the SSADH gene for aldehyde dehydrogenase 5 family member
             A, the 3' part of the KIAA0319 gene and a CpG island,
             complete sequence
          Length = 126990

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 430   cgccgaggccatgaagaaga 449
             ||||||||||||||||||||
Sbjct: 66485 cgccgaggccatgaagaaga 66504
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>emb|CR942205.4| Human DNA sequence from clone RP11-948M1 on chromosome 6, complete
              sequence
          Length = 176819

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 430    cgccgaggccatgaagaaga 449
              ||||||||||||||||||||
Sbjct: 165795 cgccgaggccatgaagaaga 165776
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>emb|Y16952.3|AME16952 Amycolatopsis balhimycina biosynthetic gene cluster for balhimycin,
             strain DSM 5908
          Length = 66669

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 307   cgtcgacgacctgctcgccg 326
             ||||||||||||||||||||
Sbjct: 62018 cgtcgacgacctgctcgccg 62037
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>emb|Y11192.1|HSNDSSADH Homo sapiens mRNA for succinic semialdehyde dehydrogenase precursor
            (ALDH5A1 gene)
          Length = 2531

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 430  cgccgaggccatgaagaaga 449
            ||||||||||||||||||||
Sbjct: 1080 cgccgaggccatgaagaaga 1099
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 417    aggccgaggcgcgcgccgaggcca 440
              ||||||||| ||||||||||||||
Sbjct: 469276 aggccgaggtgcgcgccgaggcca 469299
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>emb|X53957.1|TAFBP1 Wheat FBP gene for chloroplast fructose-1,6-bisphosphatase
          Length = 3600

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 51   cggcggcgacgatgttggaggagc 74
            |||||||| |||||||||||||||
Sbjct: 2390 cggcggcgtcgatgttggaggagc 2367
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>emb|X07780.1|TAFBP Wheat mRNA for fructose-1,6-bisphosphatase (EC 3.1.3.11)
          Length = 1399

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 51  cggcggcgacgatgttggaggagc 74
           |||||||| |||||||||||||||
Sbjct: 647 cggcggcgtcgatgttggaggagc 624
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 415     cgaggccgaggcgcgcgccg 434
               ||||||||||||||||||||
Sbjct: 1529254 cgaggccgaggcgcgcgccg 1529273
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>gb|BC034321.1| Homo sapiens aldehyde dehydrogenase 5 family, member A1
            (succinate-semialdehyde dehydrogenase), transcript
            variant 2, mRNA (cDNA clone MGC:41874 IMAGE:4829533),
            complete cds
          Length = 1749

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 430  cgccgaggccatgaagaaga 449
            ||||||||||||||||||||
Sbjct: 1108 cgccgaggccatgaagaaga 1127
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>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29
          Length = 299050

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 420    ccgaggcgcgcgccgaggcc 439
              ||||||||||||||||||||
Sbjct: 248506 ccgaggcgcgcgccgaggcc 248487
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>emb|AJ427354.2|HSA427354 Homo sapiens partial mRNA for succinic semialdehyde dehydrogenase
           (ALDH5A1 gene)
          Length = 2034

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 430 cgccgaggccatgaagaaga 449
           ||||||||||||||||||||
Sbjct: 915 cgccgaggccatgaagaaga 934
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>emb|AJ000264.1|SGJ000264 Streptomyces granaticolor gene encoding protein kinase
          Length = 4205

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 306  acgtcgacgacctgctcgccgccg 329
            ||||||||||| ||||||||||||
Sbjct: 2219 acgtcgacgacgtgctcgccgccg 2242
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>gb|DQ432066.1| Amycolatopsis mediterranei glnR operon, partial sequence; putative
            thioredoxin, hypothetical protein, transcription
            regulator GlnR, putative acetyltransferase (LH3),
            putative phosphate ABC transporter, and putative
            phosphate transport system permease genes, complete cds
          Length = 6027

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 304  ctacgtcgacgacctgctcgccgc 327
            |||||||| |||||||||||||||
Sbjct: 5410 ctacgtcgtcgacctgctcgccgc 5433
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>emb|AJ621752.1| Pan troglodytes mRNA for succinic semialdehyde dehydrogenase
            precursor (aldh5a1 gene)
          Length = 1638

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 430  cgccgaggccatgaagaaga 449
            ||||||||||||||||||||
Sbjct: 1080 cgccgaggccatgaagaaga 1099
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>emb|AJ621751.1| Gorilla gorilla mRNA for succinic semialdehyde dehydrogenase
            precursor (aldh5a1 gene)
          Length = 1638

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 430  cgccgaggccatgaagaaga 449
            ||||||||||||||||||||
Sbjct: 1080 cgccgaggccatgaagaaga 1099
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>gb|AC090713.6| Oryza sativa chromosome 3 BAC OSJNBa0002J24 genomic sequence, complete
             sequence
          Length = 146022

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 416   gaggccgaggcgcgcgccgaggcc 439
             |||||||||||||||| |||||||
Sbjct: 41366 gaggccgaggcgcgcggcgaggcc 41343
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 160     cgacgcgctcatccgctcct 179
               ||||||||||||||||||||
Sbjct: 5351975 cgacgcgctcatccgctcct 5351956
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 297     acctgctctacgtcgacgacctgc 320
               |||||||| |||||||||||||||
Sbjct: 1622615 acctgctcgacgtcgacgacctgc 1622592
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>gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1364E02,
            complete sequence
          Length = 126027

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 51   cggcggcgacgatgttggaggagc 74
            |||||||| |||||||||||||||
Sbjct: 5454 cggcggcgtcgatgttggaggagc 5477
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>gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1364E02,
             complete sequence
          Length = 112265

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 51    cggcggcgacgatgttggaggagc 74
             |||||||| |||||||||||||||
Sbjct: 57719 cggcggcgtcgatgttggaggagc 57742
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>gb|AC008168.3| Homo sapiens BAC clone RP11-178F7 from 2, complete sequence
          Length = 56320

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 334   cagggacttctcccagatct 353
             ||||||||||||||||||||
Sbjct: 30716 cagggacttctcccagatct 30697
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>gb|AE004544.1| Pseudomonas aeruginosa PAO1, section 105 of 529 of the complete
            genome
          Length = 11478

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 93   gcgggctgatcctgtggtcgtcct 116
            ||||||||| ||||||||||||||
Sbjct: 9075 gcgggctgagcctgtggtcgtcct 9052
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 309     tcgacgacctgctcgccgcc 328
               ||||||||||||||||||||
Sbjct: 1487346 tcgacgacctgctcgccgcc 1487365
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>ref|XM_238103.3| PREDICTED: Rattus norvegicus AKT1 substrate 1 (proline-rich)
           (predicted) (Akt1s1_predicted), mRNA
          Length = 839

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 120 gggccctgggcggggcggcg 139
           ||||||||||||||||||||
Sbjct: 192 gggccctgggcggggcggcg 173
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>emb|AJ427355.2|HSA427355 Homo sapiens mRNA for succinic semialdehyde dehydrogenase precursor
            (ALDH5A1 gene)
          Length = 5103

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 430  cgccgaggccatgaagaaga 449
            ||||||||||||||||||||
Sbjct: 1080 cgccgaggccatgaagaaga 1099
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>gb|AF217189.1|AF217189 Sorangium cellulosum putative transposase gene, partial cds; putative
             transposase gene, complete cds; epothilone biosynthesis
             gene cluster, complete sequence; putative membrane protein
             gene, complete cds
          Length = 58733

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   catccgctcctgcctgctcg 188
             ||||||||||||||||||||
Sbjct: 46897 catccgctcctgcctgctcg 46916
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>dbj|AP005528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0702C09
          Length = 138203

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    cgacctgctcgccgccgtcc 332
              ||||||||||||||||||||
Sbjct: 120031 cgacctgctcgccgccgtcc 120012
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 310     cgacgacctgctcgccgccg 329
               ||||||||||||||||||||
Sbjct: 4347766 cgacgacctgctcgccgccg 4347747
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>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0033D24
          Length = 186132

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 313   cgacctgctcgccgccgtcc 332
             ||||||||||||||||||||
Sbjct: 51846 cgacctgctcgccgccgtcc 51827
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>emb|Z70524.1|SPPDR5ABC S.polyrrhiza mRNA for PDR5-like ABC transporter
          Length = 4646

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 317  ctgctcgccgccgtccgcagggac 340
            ||||||||||||||| ||||||||
Sbjct: 2136 ctgctcgccgccgtcggcagggac 2159
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>gb|AF210843.1|AF210843 Sorangium cellulosum strain So ce90 epothilone biosynthesis gene
             cluster, complete sequence
          Length = 68750

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   catccgctcctgcctgctcg 188
             ||||||||||||||||||||
Sbjct: 52509 catccgctcctgcctgctcg 52528
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>dbj|AK103002.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116G06, full
           insert sequence
          Length = 834

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 416 gaggccgaggcgcgcgccgaggcc 439
           |||||||||||||||| |||||||
Sbjct: 195 gaggccgaggcgcgcggcgaggcc 172
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 416    gaggccgaggcgcgcgccga 435
              ||||||||||||||||||||
Sbjct: 763090 gaggccgaggcgcgcgccga 763071
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>dbj|AK065449.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013003P03, full
           insert sequence
          Length = 2552

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 313 cgacctgctcgccgccgtcc 332
           ||||||||||||||||||||
Sbjct: 648 cgacctgctcgccgccgtcc 667
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>dbj|AK065201.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E24, full
           insert sequence
          Length = 1495

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 51  cggcggcgacgatgttggaggagc 74
           |||||||| |||||||||||||||
Sbjct: 626 cggcggcgtcgatgttggaggagc 603
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>dbj|AK062233.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-D10, full
           insert sequence
          Length = 1404

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 51  cggcggcgacgatgttggaggagc 74
           |||||||| |||||||||||||||
Sbjct: 640 cggcggcgtcgatgttggaggagc 617
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>gb|L34820.1|HUMSSADH Human NAD+-dependent succinate-semialdehyde dehydrogenase (SSADH)
           mRNA, 3' end
          Length = 1071

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 430 cgccgaggccatgaagaaga 449
           ||||||||||||||||||||
Sbjct: 444 cgccgaggccatgaagaaga 463
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>dbj|AB007194.1| Oryza sativa mRNA for fructose-1,6-bisphosphatase (plastidic
           isoform), complete cds
          Length = 1424

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 51  cggcggcgacgatgttggaggagc 74
           |||||||| |||||||||||||||
Sbjct: 608 cggcggcgtcgatgttggaggagc 585


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,736,368
Number of Sequences: 3902068
Number of extensions: 3736368
Number of successful extensions: 84132
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80310
Number of HSP's gapped (non-prelim): 3820
length of query: 467
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 445
effective length of database: 17,147,199,772
effective search space: 7630503898540
effective search space used: 7630503898540
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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