ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd27c10 |
|---|---|
| Clone Library Name | barley_pub |
>SGAT_ARATH (Q56YA5) Serine--glyoxylate aminotransferase (EC 2.6.1.45)| (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) (Serine--pyruvate aminotransferase) (EC 2.6.1.51) Length = 401 Score = 285 bits (728), Expect = 7e-77 Identities = 137/174 (78%), Positives = 151/174 (86%) Frame = +2 Query: 11 RGDEWGVDVALTGSQKALSLPTGLGIVCASPKALEAAKTAKSVRVFFDWKDYLKFYKMGT 190 R DEWGVDVALTGSQKALSLPTGLGIVCASPKALEA KT+KS++VFFDW DYLKFYK+GT Sbjct: 186 RMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEATKTSKSLKVFFDWNDYLKFYKLGT 245 Query: 191 YWPYTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFS 370 YWPYTPSIQ FEEGL+N+I RH RLG ATRLAV AWGLKNCT+KEE S Sbjct: 246 YWPYTPSIQLLYGLRAALDLIFEEGLENIIARHARLGKATRLAVEAWGLKNCTQKEEWIS 305 Query: 371 DTVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGHLGHLNELQL 532 +TVTAV+VPP+ID SEIV+ AW+RYNLSLGLGLNKVAGKVFRIGHLG++NELQL Sbjct: 306 NTVTAVMVPPHIDGSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGNVNELQL 359
>SGAA_METEX (P55819) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT)| Length = 379 Score = 179 bits (455), Expect = 3e-45 Identities = 93/173 (53%), Positives = 117/173 (67%), Gaps = 5/173 (2%) Frame = +2 Query: 29 VDVALTGSQKALSLPTGLGIVCASPKALEAA-----KTAKSVRVFFDWKDYLKFYKMGTY 193 VD A+ GSQK L LP GLG++C S KAL+AA + + RV+FDW+D K G Y Sbjct: 169 VDCAIAGSQKGLMLPAGLGVICVSQKALKAAEGQSGRNDRLARVYFDWEDQKKQNPTG-Y 227 Query: 194 WPYTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSD 373 +PYTP + FEEGL+NV RH LG ATR AVAAWGLK C + E SD Sbjct: 228 FPYTPPLPLLYGLREALACLFEEGLENVYHRHAVLGEATRQAVAAWGLKTCAKSPEWNSD 287 Query: 374 TVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGHLGHLNELQL 532 TVTA++ P +D+++I+KHA+ RYNL+LG GL++VAGKVFRIGH+G LNEL L Sbjct: 288 TVTAILAPEGVDAAKIIKHAYVRYNLALGAGLSQVAGKVFRIGHVGDLNELSL 340
>SGAA_HYPME (O08374) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT)| Length = 404 Score = 172 bits (437), Expect = 4e-43 Identities = 91/176 (51%), Positives = 116/176 (65%), Gaps = 2/176 (1%) Frame = +2 Query: 11 RGDEWGVDVALTGSQKALSLPTGLGIVCASPKALEA--AKTAKSVRVFFDWKDYLKFYKM 184 R EWGVD ++GSQK LPTGLGI+ S KAL+ +K + R FF ++D +K Sbjct: 180 RMGEWGVDCCVSGSQKGFMLPTGLGILAVSQKALDINKSKNGRMNRCFFSFEDMIKTNDQ 239 Query: 185 GTYWPYTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEEN 364 G ++PYTP+ Q F EGLDNV RHTRL + R AV AWGLK C ++ + Sbjct: 240 G-FFPYTPATQLLRGLRTSLDLLFAEGLDNVFARHTRLASGVRAAVDAWGLKLCAKEPKW 298 Query: 365 FSDTVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGHLGHLNELQL 532 +SDTV+A++VP IDS+ I K A+ RYN S GLGLNKVAGKVFRIGHLG L+E+ + Sbjct: 299 YSDTVSAILVPEGIDSNAITKTAYYRYNTSFGLGLNKVAGKVFRIGHLGMLDEVMI 354
>Y959_METJA (Q58369) Putative aminotransferase MJ0959 (EC 2.6.1.-)| Length = 385 Score = 105 bits (263), Expect = 6e-23 Identities = 62/173 (35%), Positives = 90/173 (52%), Gaps = 1/173 (0%) Frame = +2 Query: 17 DEWGVDVALTGSQKALSLPTGLGIVCASPKALEAAK-TAKSVRVFFDWKDYLKFYKMGTY 193 D++ +D+ +TGSQK L+ P GL + S KA E K V + D Y K+Y+ Sbjct: 181 DKFHIDICVTGSQKCLAAPPGLAAITVSEKAWEVIKKNDDKVGFYLDLLAYKKYYEEKKQ 240 Query: 194 WPYTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSD 373 PYTPS+ EEG++N +KRH RL ATR + A G++ KE S Sbjct: 241 TPYTPSVNLTYALNVALDLVLEEGIENRVKRHERLAKATRAGLEAMGIE-LFAKERARSV 299 Query: 374 TVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGHLGHLNELQL 532 TVT+ P I+ S+ +YN+ + G +AGK+FRIGH+G E ++ Sbjct: 300 TVTSAKYPEGIEDSKFRGILSNKYNIVVAGGQKHLAGKIFRIGHMGICGEKEV 352
>DHSS_ANACY (P16421) Soluble hydrogenase 42 kDa subunit (EC 1.12.-.-) (Tritium| exchange subunit) Length = 383 Score = 97.4 bits (241), Expect = 2e-20 Identities = 60/169 (35%), Positives = 90/169 (53%) Frame = +2 Query: 17 DEWGVDVALTGSQKALSLPTGLGIVCASPKALEAAKTAKSVRVFFDWKDYLKFYKMGTYW 196 D G+DV +GSQK +P GLG V SPKA EA KTAK + + D Y K T Sbjct: 181 DALGLDVVASGSQKGYMIPPGLGFVSVSPKAWEAYKTAKLPKYYLDLGKYRKATAKNT-T 239 Query: 197 PYTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDT 376 P+TP + +EGL+++ RH R ATR A+ A L +E S Sbjct: 240 PFTPPVNLMVALHTTLGMMKKEGLESIFTRHERQKNATRAAMKALNLP-LFAADECASPA 298 Query: 377 VTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGHLGHLNE 523 +TAV P +++ +I KR++++L G + ++ K+FR+GHLG +++ Sbjct: 299 ITAVATPG-MEADKIRSLMKKRFDIALAGGQDHLSNKIFRVGHLGFVSD 346
>SGAT_MAIZE (P84187) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT)| (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) (Fragments) Length = 136 Score = 95.9 bits (237), Expect = 6e-20 Identities = 69/161 (42%), Positives = 74/161 (45%), Gaps = 1/161 (0%) Frame = +2 Query: 17 DEWGVDVALTGSQKALSLPTGLGIVCASPKALEAAKTAKSVRVFFDWKDYLKFYKMGTYW 196 DEWGVDVALTGSQKALS PTG+G+VCASP RVFFDWKDYL+ TYW Sbjct: 48 DEWGVDVALTGSQKALSFPTGMGLVCASP------------RVFFDWKDYLR-----TYW 90 Query: 197 PYTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDT 376 Y ++ LD LAV AWGL N Sbjct: 91 HY------------------DQALD------------LELAVEAWGLSN----------- 109 Query: 377 VTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVA-GKVFR 496 RYNLSLGLGLNKVA GKVFR Sbjct: 110 ---------------------RYNLSLGLGLNKVAGGKVFR 129
>DHSS_SYNP1 (P14776) Soluble hydrogenase, small subunit (EC 1.12.-.-) (Tritium| exchange subunit) Length = 384 Score = 95.9 bits (237), Expect = 6e-20 Identities = 61/169 (36%), Positives = 87/169 (51%) Frame = +2 Query: 17 DEWGVDVALTGSQKALSLPTGLGIVCASPKALEAAKTAKSVRVFFDWKDYLKFYKMGTYW 196 DEWG+DV +GSQK +P GL V SPKA EA KTA + + D Y K T Sbjct: 181 DEWGLDVVGSGSQKGYMIPPGLAFVSVSPKAWEAYKTATLPKFYLDLGKYRKDAAKHT-T 239 Query: 197 PYTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDT 376 P+TP + EGL+ + +RH RL ATR A+ A L + S Sbjct: 240 PFTPPVNLFFALKTALEMMQAEGLEAIFQRHQRLMQATRAAMKALNLP-LYAADSCASPA 298 Query: 377 VTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGHLGHLNE 523 +TA V P +++ I KR++++L G + + G++FRIGHLG + + Sbjct: 299 ITA-VAPQGVEAENIRSLMKKRFDIALAGGQDHLKGQIFRIGHLGFVGD 346
>SPYA_FELCA (P41689) Serine--pyruvate aminotransferase, mitochondrial precursor| (EC 2.6.1.51) (SPT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) Length = 414 Score = 62.8 bits (151), Expect = 6e-10 Identities = 48/174 (27%), Positives = 72/174 (41%), Gaps = 9/174 (5%) Frame = +2 Query: 17 DEWGVDVALTGSQKALSLPTGLGIVCASPKALEAAKTAKSVRVFFDWKDYLKFYKMGTYW 196 D+ G+DV +GSQK L+ P G ++ S KA T K+ V F YL + W Sbjct: 218 DQQGIDVLYSGSQKVLNSPPGTSLISFSDKAKNKIYTRKTKPVSF----YLDMKWLANIW 273 Query: 197 P---------YTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRLGTATRLAVAAWGLKNCT 349 +T + E+GL+N ++H + + GL+ Sbjct: 274 GCDGKPRIYHHTTPVVSLYSLRESLALIAEQGLENSWRQHREVTAYLHGRLQGLGLQLFV 333 Query: 350 EKEENFSDTVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGHLG 511 + TVT V VP D +IV + +++ + GL GKV RIG LG Sbjct: 334 KDPALRLPTVTTVAVPAGYDWRDIVNYVMDHFDIEITGGLGPSMGKVLRIGLLG 387
>SPYA_HUMAN (P21549) Serine--pyruvate aminotransferase (EC 2.6.1.51) (SPT)| (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) Length = 392 Score = 61.6 bits (148), Expect = 1e-09 Identities = 47/174 (27%), Positives = 73/174 (41%), Gaps = 9/174 (5%) Frame = +2 Query: 17 DEWGVDVALTGSQKALSLPTGLGIVCASPKALEAAKTAKSVRVFFDWKDYLKFYKMGTYW 196 D G+D+ +GSQKAL+ P G ++ S KA + + K+ F YL + +W Sbjct: 196 DRQGIDILYSGSQKALNAPPGTSLISFSDKAKKKMYSRKTKPFSF----YLDIKWLANFW 251 Query: 197 P---------YTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRLGTATRLAVAAWGLKNCT 349 +T + E+GL+N ++H + A GL+ Sbjct: 252 GCDDQPRMYHHTIPVISLYSLRESLALIAEQGLENSWRQHREAAAYLHGRLQALGLQLFV 311 Query: 350 EKEENFSDTVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGHLG 511 + TVT V VP D +IV + +++ + GL GKV RIG LG Sbjct: 312 KDPALRLPTVTTVAVPAGYDWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGLLG 365
>SPYA_RAT (P09139) Serine--pyruvate aminotransferase, mitochondrial precursor| (EC 2.6.1.51) (SPT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) Length = 414 Score = 61.2 bits (147), Expect = 2e-09 Identities = 45/175 (25%), Positives = 72/175 (41%), Gaps = 9/175 (5%) Frame = +2 Query: 17 DEWGVDVALTGSQKALSLPTGLGIVCASPKALEAAKTAKSVRVFFDWKDYLKFYKMGTYW 196 D+ G+D+ +GSQK L+ P G+ ++ + KA + K+ V F Y + W Sbjct: 218 DQQGIDILYSGSQKVLNAPPGISLISFNDKAKSKVYSRKTKPVSF----YTDITYLSKLW 273 Query: 197 P---------YTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRLGTATRLAVAAWGLKNCT 349 +T + E+GL+N +RH + GLK Sbjct: 274 GCEGKTRVIHHTLPVISLYCLRESLALISEQGLENSWRRHREATAHLHKCLRELGLKFFV 333 Query: 350 EKEENFSDTVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGHLGH 514 + E T+T V VP + +IV + +N+ + GL KV RIG LG+ Sbjct: 334 KDPEIRLPTITTVTVPAGYNWRDIVSYVLDHFNIEISGGLGPSEDKVLRIGLLGY 388
>SPYA_CALJA (P31029) Serine--pyruvate aminotransferase, mitochondrial precursor| (EC 2.6.1.51) (SPT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) Length = 414 Score = 58.5 bits (140), Expect = 1e-08 Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 9/174 (5%) Frame = +2 Query: 17 DEWGVDVALTGSQKALSLPTGLGIVCASPKALEAAKTAKSVRVFFDWKDYLKFYKMGTYW 196 D+ G+D+ +GSQK L+ P G ++ S A + K+ F YL + W Sbjct: 218 DQQGIDILYSGSQKVLNAPPGTSLLSFSDTAKNKIYSRKTKPSSF----YLDVKYLANLW 273 Query: 197 P---------YTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRLGTATRLAVAAWGLKNCT 349 +T + E+GL+N ++H + A GL+ Sbjct: 274 GCDGQPRMYHHTTPVVSLYSLREGLALLSEQGLENSWRKHREAAAYLHGRLQALGLRLFV 333 Query: 350 EKEENFSDTVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGHLG 511 + TVT V VP D +IV + +R+ + + GL GKV RIG +G Sbjct: 334 KDPALRLPTVTTVAVPTGYDWRDIVSYLIERFGIEITGGLGPSTGKVLRIGLMG 387
>PUCG_BACSU (O32148) Purine catabolism protein pucG (EC 2.-.-.-)| Length = 416 Score = 57.0 bits (136), Expect = 3e-08 Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 20/186 (10%) Frame = +2 Query: 17 DEWGVDVALTGSQKALSLPTGL---------GIVCASPKALEAAKTAKSVRVFFD----- 154 DEW +D A+ G+QK LS+P+G+ V A+ K +E ++ R Sbjct: 185 DEWKIDAAIGGTQKCLSVPSGMAPITYNERVADVIAARKKVERGIATQADRAALSGNRPI 244 Query: 155 WKDYLKFYKMGTYWP------YTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRLGTATRL 316 +Y ++ YW +T + EEGL+ +RH A Sbjct: 245 TSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAA 304 Query: 317 AVAAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFR 496 + A GL+ + + VT V +P ID + ++ + + +AGK++R Sbjct: 305 GIKAMGLRLFGD-DSCKMPVVTCVEIPGGIDGESVRDMLLAQFGIEIASSFGPLAGKIWR 363 Query: 497 IGHLGH 514 IG +G+ Sbjct: 364 IGTMGY 369
>SPYA_RABIT (P31030) Serine--pyruvate aminotransferase (EC 2.6.1.51) (SPT)| (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) Length = 392 Score = 56.2 bits (134), Expect = 5e-08 Identities = 45/174 (25%), Positives = 69/174 (39%), Gaps = 9/174 (5%) Frame = +2 Query: 17 DEWGVDVALTGSQKALSLPTGLGIVCASPKALEAAKTAKSVRVFFDWKDYLKFYKMGTYW 196 D+ G+DV +GSQKAL+ P G ++ S KA K+ F Y+ + W Sbjct: 196 DQQGIDVLYSGSQKALNAPPGTSLISFSDKAKSKIYARKTKPFSF----YMDVQLLANIW 251 Query: 197 ---------PYTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRLGTATRLAVAAWGLKNCT 349 +T + E+GL+ +RH + + GL+ Sbjct: 252 GCDGKPRMYHHTTPVIGIFALRESLALLVEQGLEKSWQRHREVAQHLYRRLQELGLQLFV 311 Query: 350 EKEENFSDTVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGHLG 511 + TVT V+VP +IV + + + + GL A KV RIG LG Sbjct: 312 KDPALRLPTVTTVIVPASYRWRDIVSYVMHHFGIEITGGLGPSADKVLRIGLLG 365
>SPYA_MOUSE (O35423) Serine--pyruvate aminotransferase, mitochondrial precursor| (EC 2.6.1.51) (SPT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) Length = 413 Score = 50.8 bits (120), Expect = 2e-06 Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 9/175 (5%) Frame = +2 Query: 17 DEWGVDVALTGSQKALSLPTGLGIVCASPKALEAAKTAKSVRVFFDWKDYLKFYKMGTYW 196 D+ G+D+ + SQK L+ P G+ ++ + KA + K+ V F Y + W Sbjct: 218 DQQGIDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSRKTKPVSF----YTDITYLAKLW 273 Query: 197 ---------PYTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRLGTATRLAVAAWGLKNCT 349 +T + E GL+N +RH + GLK Sbjct: 274 GCEGETRVIHHTTPVTSLYCLRESLALIAERGLENCWRRHREATAHLHKHLQEMGLKFFV 333 Query: 350 EKEENFSDTVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGHLGH 514 + E T+T V Y + +IV + +++ + GL +V RIG LG+ Sbjct: 334 KDPEIRLPTITTVTAAGY-NWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGY 387
>AGX1_YEAST (P43567) Alanine--glyoxylate aminotransferase 1 (EC 2.6.1.44)| Length = 385 Score = 50.8 bits (120), Expect = 2e-06 Identities = 52/177 (29%), Positives = 76/177 (42%), Gaps = 12/177 (6%) Frame = +2 Query: 17 DEWGVDVALTGSQKALSLPTGLGIVCASPKALEAAKTAKS---VRVFFD----WKDYLKF 175 DEWGVD ALT SQKA+ P GL I S + ++ A V +F W ++ Sbjct: 188 DEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMEN 247 Query: 176 YK--MGTYWPYTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRLGTATR-LAVAAWGLKNC 346 Y+ G Y+ TP +Q EEGL H + + V L + Sbjct: 248 YEAGKGAYFA-TPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSV 306 Query: 347 TEKEENFS-DTVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAG-KVFRIGHLG 511 + N S +TAV V D +++ K + + + G++K G K RIGH+G Sbjct: 307 SRYPSNMSAHGLTAVYV---ADPPDVIAFL-KSHGVVIAGGIHKDIGPKYIRIGHMG 359
>POLG_TBEVH (Q01299) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3414 Score = 32.7 bits (73), Expect = 0.65 Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 7/140 (5%) Frame = +2 Query: 59 ALSLPTGLGIVCASPKALEAAKTAKSVRVFFDWKDYLKFYKMGTYWPYTPSIQXXXXXXX 238 A++L G + CA + + + V W++ ++Y Y+P TP Sbjct: 769 AMTLGVGADVGCAVDTERMELRCGEGLVV---WREVSEWYDNYAYYPETPG-----ALAS 820 Query: 239 XXXXXFEEGLDNVIKRHTRL------GTATRLAVA-AWGLKNCTEKEENFSDTVTAVVVP 397 FEEG V+ ++ RL + T L +A A G N T + F T VP Sbjct: 821 AIKETFEEGSCGVVPQN-RLEMAMWRSSVTELNLALAEGEANLTVMVDKFDPTDYRGGVP 879 Query: 398 PYIDSSEIVKHAWKRYNLSL 457 + + +K +WK + S+ Sbjct: 880 GLLKKGKDIKVSWKSWGHSM 899
>CEFD_NOCLA (Q03046) Isopenicillin N epimerase (EC 5.1.1.17)| Length = 398 Score = 32.7 bits (73), Expect = 0.65 Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 3/85 (3%) Frame = +2 Query: 254 FEEGLDN--VIKRHTRLGTATRLAVAAW-GLKNCTEKEENFSDTVTAVVVPPYIDSSEIV 424 F+ GL + V +R L TR ++ W GL+ T S +TA +PP D++ + Sbjct: 292 FQAGLGHGRVRERMRELAAFTRERLSGWRGLEPVTPAHPGLSGAMTAFRLPPGTDTAGLR 351 Query: 425 KHAWKRYNLSLGLGLNKVAGKVFRI 499 W R+ + + + L++ G + R+ Sbjct: 352 HGLWDRFRIDVPV-LDRPDGPLLRV 375
>POLG_TBEVW (P14336) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3414 Score = 32.3 bits (72), Expect = 0.85 Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 7/140 (5%) Frame = +2 Query: 59 ALSLPTGLGIVCASPKALEAAKTAKSVRVFFDWKDYLKFYKMGTYWPYTPSIQXXXXXXX 238 A++L G + CA + + + V W++ ++Y Y+P TP Sbjct: 769 AMTLGVGADVGCAVDTERMELRCGEGLVV---WREVSEWYDNYAYYPETPG-----ALAS 820 Query: 239 XXXXXFEEGLDNVIKRHTRL------GTATRLAVA-AWGLKNCTEKEENFSDTVTAVVVP 397 FEEG V+ ++ RL + T L +A A G N T + F T VP Sbjct: 821 AIKETFEEGSCGVVPQN-RLEMAMWRSSVTELNLALAEGEANLTVVVDKFDPTDYRGGVP 879 Query: 398 PYIDSSEIVKHAWKRYNLSL 457 + + +K +WK + S+ Sbjct: 880 GLLKKGKDIKVSWKSWGHSM 899
>SGAT_WHEAT (P84188) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT)| (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) (Fragments) Length = 78 Score = 30.4 bits (67), Expect = 3.2 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +2 Query: 122 KTAKSVRVFFDWKDYLK 172 K + RVFFDWKDYLK Sbjct: 38 KLLDAYRVFFDWKDYLK 54 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.135 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,151,900 Number of Sequences: 219361 Number of extensions: 575912 Number of successful extensions: 2045 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 1953 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2024 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4142954952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
