ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26n10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK100714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023115K12, full insert sequence Length = 1696 Score = 256 bits (129), Expect = 8e-65 Identities = 288/341 (84%) Strand = Plus / Plus Query: 279 gctccacaccccactgcaaatgtccttgcaagtaacattcttttggatccctgttcaagt 338 |||||||||||||||||||||||| | ||| |||| ||||||||||||| ||||||| Sbjct: 367 gctccacaccccactgcaaatgtcagtacaaacaacagccttttggatcccttttcaagt 426 Query: 339 ggggctggcaatgtgctatcactgcaaaaacatgagcctgaatgttcaagtaatatctca 398 ||| ||| | |||||||| | ||||||||||||||||||||||||||||| | | ||| Sbjct: 427 gggaatggtactgtgctattagtgcaaaaacatgagcctgaatgttcaagtgttgtatca 486 Query: 399 tcaacgataaaggcagtagatggatctgaagatgaggatcacaagttatttaaccaattt 458 |||| || || | ||| | ||||||||||| ||| | |||| || |||||||||||| Sbjct: 487 tcaatgacaaggacagaatatggatctgaaagtgatggctacaatttgtttaaccaattt 546 Query: 459 gacgttgttcaagattactcagaccaccactatgcaaagacctcaccagggaagacgagc 518 || ||||| ||||||| || || || |||||||||||| |||||||||||||| | Sbjct: 547 gatgttgtgcaagatttttctgatcattactatgcaaagaattcaccagggaagacctcc 606 Query: 519 aaagattggacgaaaacaatccaaaatgaatggaagcttctacagagagatctacctgga 578 ||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 607 aaagattgggtgaagacaatccaaaatgaatggaagcttctacagaaagatctacctgaa 666 Query: 579 tctatatatgttagagtttatgaggacaggattgatctgct 619 ||||| |||||||||| ||||||||| |||||||||||||| Sbjct: 667 tctatctatgttagagcttatgaggataggattgatctgct 707
>dbj|AK102311.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090D11, full insert sequence Length = 4082 Score = 206 bits (104), Expect = 6e-50 Identities = 282/341 (82%), Gaps = 4/341 (1%) Strand = Plus / Plus Query: 279 gctccacaccccactgcaaatgtccttgcaagtaacattcttttggatccctgttcaagt 338 |||||||||||||||||||||||| ||| |||| ||||||||||||| ||||| | Sbjct: 414 gctccacaccccactgcaaatgtcagcacaaacaacagccttttggatcccttttcaact 473 Query: 339 ggggctggcaatgtgctatcactgcaaaaacatgagcctgaatgttcaagtaatatctca 398 ||| ||| | ||||||||| ||||||||||||||||||||||||||||| ||| ||| Sbjct: 474 gggaatggtactgtgctatctgtgcaaaaacatgagcctgaatgttcaagtgttatatca 533 Query: 399 tcaacgataaaggcagtagatggatctgaagatgaggatcacaagttatttaaccaattt 458 |||| || || | ||| | |||||| |||| ||| | | ||| || |||| ||| ||| Sbjct: 534 tcaatgacaaggacagaatatggatttgaaagtgatggttgcaatttgtttagccatttt 593 Query: 459 gacgttgttcaagattactcagaccaccactatgcaaagacctcaccagggaagacgagc 518 || ||||||||||||| || ||||| |||||||||||| |||||||| || | Sbjct: 594 gatgttgttcaagatttttctgaccattactatgcaaagaattcaccagg----acctcc 649 Query: 519 aaagattggacgaaaacaatccaaaatgaatggaagcttctacagagagatctacctgga 578 ||||||||| ||| ||||||||||||||||||| ||||||||||| ||||||||||| | Sbjct: 650 aaagattgggtgaagacaatccaaaatgaatggaggcttctacagaaagatctacctgaa 709 Query: 579 tctatatatgttagagtttatgaggacaggattgatctgct 619 ||||| |||||||||||||||||||| |||||||||||||| Sbjct: 710 tctatctatgttagagtttatgaggataggattgatctgct 750
>dbj|AK065429.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023I02, full insert sequence Length = 1924 Score = 153 bits (77), Expect = 8e-34 Identities = 119/133 (89%) Strand = Plus / Plus Query: 487 actatgcaaagacctcaccagggaagacgagcaaagattggacgaaaacaatccaaaatg 546 |||||||||||| |||||||||||||| |||||||||| ||| |||||||| |||| Sbjct: 692 actatgcaaagaattcaccagggaagacctccaaagattgggtgaagacaatccagaatg 751 Query: 547 aatggaagcttctacagagagatctacctggatctatatatgttagagtttatgaggaca 606 |||||| ||||||||||| ||||||||||| |||||| |||||||||||||||||||| | Sbjct: 752 aatggaggcttctacagaaagatctacctgaatctatctatgttagagtttatgaggata 811 Query: 607 ggattgatctgct 619 ||||||||||||| Sbjct: 812 ggattgatctgct 824 Score = 103 bits (52), Expect = 7e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 279 gctccacaccccactgcaaatgtccttgcaagtaacattcttttggatccctgttcaagt 338 |||||||||||||||||||||||| | ||| |||| ||||||||||||| ||||| | Sbjct: 487 gctccacaccccactgcaaatgtcagtacaaacaacagccttttggatcccttttcaact 546 Query: 339 ggggctggcaatgtgctatcactgcaaaaacatgagcctgaatgttcaagtaatatctca 398 ||| ||| | ||||||||| ||||||||||||||||||||||||||||| ||| ||| Sbjct: 547 gggaatggtactgtgctatctgtgcaaaaacatgagcctgaatgttcaagtgttatatca 606 Query: 399 tcaa 402 |||| Sbjct: 607 tcaa 610
>dbj|AK065381.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013003E06, full insert sequence Length = 2958 Score = 153 bits (77), Expect = 8e-34 Identities = 119/133 (89%) Strand = Plus / Plus Query: 487 actatgcaaagacctcaccagggaagacgagcaaagattggacgaaaacaatccaaaatg 546 |||||||||||| |||||||||||||| |||||||||| ||| |||||||| |||| Sbjct: 698 actatgcaaagaattcaccagggaagacctccaaagattgggtgaagacaatccagaatg 757 Query: 547 aatggaagcttctacagagagatctacctggatctatatatgttagagtttatgaggaca 606 |||||| ||||||||||| ||||||||||| |||||| |||||||||||||||||||| | Sbjct: 758 aatggaggcttctacagaaagatctacctgaatctatctatgttagagtttatgaggata 817 Query: 607 ggattgatctgct 619 ||||||||||||| Sbjct: 818 ggattgatctgct 830 Score = 103 bits (52), Expect = 7e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 279 gctccacaccccactgcaaatgtccttgcaagtaacattcttttggatccctgttcaagt 338 |||||||||||||||||||||||| | ||| |||| ||||||||||||| ||||| | Sbjct: 493 gctccacaccccactgcaaatgtcagtacaaacaacagccttttggatcccttttcaact 552 Query: 339 ggggctggcaatgtgctatcactgcaaaaacatgagcctgaatgttcaagtaatatctca 398 ||| ||| | ||||||||| ||||||||||||||||||||||||||||| ||| ||| Sbjct: 553 gggaatggtactgtgctatctgtgcaaaaacatgagcctgaatgttcaagtgttatatca 612 Query: 399 tcaa 402 |||| Sbjct: 613 tcaa 616
>ref|NM_188645.1| Oryza sativa (japonica cultivar-group), Ozsa8248 predicted mRNA Length = 1080 Score = 131 bits (66), Expect = 3e-27 Identities = 192/234 (82%) Strand = Plus / Plus Query: 279 gctccacaccccactgcaaatgtccttgcaagtaacattcttttggatccctgttcaagt 338 |||||||||||||||||||||||| | ||| |||| ||||||||||||| ||||||| Sbjct: 94 gctccacaccccactgcaaatgtcagtacaaacaacagccttttggatcccttttcaagt 153 Query: 339 ggggctggcaatgtgctatcactgcaaaaacatgagcctgaatgttcaagtaatatctca 398 ||| ||| | |||||||| | ||||||||||||||||||||||||||||| | | ||| Sbjct: 154 gggaatggtactgtgctattagtgcaaaaacatgagcctgaatgttcaagtgttgtatca 213 Query: 399 tcaacgataaaggcagtagatggatctgaagatgaggatcacaagttatttaaccaattt 458 |||| || || | ||| | ||||||||||| ||| | |||| || |||||||||||| Sbjct: 214 tcaatgacaaggacagaatatggatctgaaagtgatggctacaatttgtttaaccaattt 273 Query: 459 gacgttgttcaagattactcagaccaccactatgcaaagacctcaccagggaag 512 || ||||| ||||||| || || || |||||||||||| |||||||||||| Sbjct: 274 gatgttgtgcaagatttttctgatcattactatgcaaagaattcaccagggaag 327 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 578 atctatatatgttagagtttatgaggacaggattgatctgct 619 |||||| |||||||||| ||||||||| |||||||||||||| Sbjct: 348 atctatctatgttagagcttatgaggataggattgatctgct 389
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 131 bits (66), Expect = 3e-27 Identities = 192/234 (82%) Strand = Plus / Minus Query: 279 gctccacaccccactgcaaatgtccttgcaagtaacattcttttggatccctgttcaagt 338 |||||||||||||||||||||||| | ||| |||| ||||||||||||| ||||||| Sbjct: 7406611 gctccacaccccactgcaaatgtcagtacaaacaacagccttttggatcccttttcaagt 7406552 Query: 339 ggggctggcaatgtgctatcactgcaaaaacatgagcctgaatgttcaagtaatatctca 398 ||| ||| | |||||||| | ||||||||||||||||||||||||||||| | | ||| Sbjct: 7406551 gggaatggtactgtgctattagtgcaaaaacatgagcctgaatgttcaagtgttgtatca 7406492 Query: 399 tcaacgataaaggcagtagatggatctgaagatgaggatcacaagttatttaaccaattt 458 |||| || || | ||| | ||||||||||| ||| | |||| || |||||||||||| Sbjct: 7406491 tcaatgacaaggacagaatatggatctgaaagtgatggctacaatttgtttaaccaattt 7406432 Query: 459 gacgttgttcaagattactcagaccaccactatgcaaagacctcaccagggaag 512 || ||||| ||||||| || || || |||||||||||| |||||||||||| Sbjct: 7406431 gatgttgtgcaagatttttctgatcattactatgcaaagaattcaccagggaag 7406378 Score = 103 bits (52), Expect = 7e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 279 gctccacaccccactgcaaatgtccttgcaagtaacattcttttggatccctgttcaagt 338 |||||||||||||||||||||||| | ||| |||| ||||||||||||| ||||| | Sbjct: 7199469 gctccacaccccactgcaaatgtcagtacaaacaacagccttttggatcccttttcaact 7199528 Query: 339 ggggctggcaatgtgctatcactgcaaaaacatgagcctgaatgttcaagtaatatctca 398 ||| ||| | ||||||||| ||||||||||||||||||||||||||||| ||| ||| Sbjct: 7199529 gggaatggtactgtgctatctgtgcaaaaacatgagcctgaatgttcaagtgttatatca 7199588 Query: 399 tcaa 402 |||| Sbjct: 7199589 tcaa 7199592 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 518 caaagattggacgaaaacaatccaaaatgaatggaagcttctacagagagatctacctgg 577 |||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 7406284 caaagattgggtgaagacaatccaaaatgaatggaagcttctacagaaagatctacctgg 7406225 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 518 caaagattggacgaaaacaatccaaaatgaatggaagcttctacagagagatctacctgg 577 |||||||||| ||| |||||||| |||||||||| ||||||||||| |||||||||||| Sbjct: 7199792 caaagattgggtgaagacaatccagaatgaatggaggcttctacagaaagatctacctgg 7199851 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 578 atctatatatgttagagtttatgaggacaggattgatctgct 619 |||||| |||||||||||||||||||| |||||||||||||| Sbjct: 7200506 atctatctatgttagagtttatgaggataggattgatctgct 7200547 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 578 atctatatatgttagagtttatgaggacaggattgatctgct 619 |||||| |||||||||| ||||||||| |||||||||||||| Sbjct: 7405608 atctatctatgttagagcttatgaggataggattgatctgct 7405567 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 ctcctccgccgccgcccccgactc 104 |||||||||||||||| ||||||| Sbjct: 40756035 ctcctccgccgccgccgccgactc 40756012 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 accccggccccggcggcgcc 45 |||||||||||||||||||| Sbjct: 18134274 accccggccccggcggcgcc 18134255
>dbj|AP002481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0702F03 Length = 141111 Score = 131 bits (66), Expect = 3e-27 Identities = 192/234 (82%) Strand = Plus / Minus Query: 279 gctccacaccccactgcaaatgtccttgcaagtaacattcttttggatccctgttcaagt 338 |||||||||||||||||||||||| | ||| |||| ||||||||||||| ||||||| Sbjct: 67639 gctccacaccccactgcaaatgtcagtacaaacaacagccttttggatcccttttcaagt 67580 Query: 339 ggggctggcaatgtgctatcactgcaaaaacatgagcctgaatgttcaagtaatatctca 398 ||| ||| | |||||||| | ||||||||||||||||||||||||||||| | | ||| Sbjct: 67579 gggaatggtactgtgctattagtgcaaaaacatgagcctgaatgttcaagtgttgtatca 67520 Query: 399 tcaacgataaaggcagtagatggatctgaagatgaggatcacaagttatttaaccaattt 458 |||| || || | ||| | ||||||||||| ||| | |||| || |||||||||||| Sbjct: 67519 tcaatgacaaggacagaatatggatctgaaagtgatggctacaatttgtttaaccaattt 67460 Query: 459 gacgttgttcaagattactcagaccaccactatgcaaagacctcaccagggaag 512 || ||||| ||||||| || || || |||||||||||| |||||||||||| Sbjct: 67459 gatgttgtgcaagatttttctgatcattactatgcaaagaattcaccagggaag 67406 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 518 caaagattggacgaaaacaatccaaaatgaatggaagcttctacagagagatctacctgg 577 |||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 67312 caaagattgggtgaagacaatccaaaatgaatggaagcttctacagaaagatctacctgg 67253 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 578 atctatatatgttagagtttatgaggacaggattgatctgct 619 |||||| |||||||||| ||||||||| |||||||||||||| Sbjct: 66636 atctatctatgttagagcttatgaggataggattgatctgct 66595
>gb|AC133335.4| Oryza sativa chromosome 3 BAC OSJNBa0005H05 genomic sequence, complete sequence Length = 55268 Score = 115 bits (58), Expect = 2e-22 Identities = 190/234 (81%) Strand = Plus / Minus Query: 279 gctccacaccccactgcaaatgtccttgcaagtaacattcttttggatccctgttcaagt 338 |||||||||||||||||||||||| ||| |||| ||||||||||||| ||||| | Sbjct: 49897 gctccacaccccactgcaaatgtcagcacaaacaacagccttttggatcccttttcaact 49838 Query: 339 ggggctggcaatgtgctatcactgcaaaaacatgagcctgaatgttcaagtaatatctca 398 ||| ||| | ||||||||| ||||||||||||||||||||||||||||| ||| ||| Sbjct: 49837 gggaatggtactgtgctatctgtgcaaaaacatgagcctgaatgttcaagtgttatatca 49778 Query: 399 tcaacgataaaggcagtagatggatctgaagatgaggatcacaagttatttaaccaattt 458 |||| || || | ||| | |||||| |||| ||| | | ||| || |||| ||| ||| Sbjct: 49777 tcaatgacaaggacagaatatggatttgaaagtgatggttgcaatttgtttagccatttt 49718 Query: 459 gacgttgttcaagattactcagaccaccactatgcaaagacctcaccagggaag 512 || ||||||||||||| || ||||| |||||||||||| |||||||||||| Sbjct: 49717 gatgttgttcaagatttttctgaccattactatgcaaagaattcaccagggaag 49664 Score = 79.8 bits (40), Expect = 1e-11 Identities = 55/60 (91%) Strand = Plus / Minus Query: 518 caaagattggacgaaaacaatccaaaatgaatggaagcttctacagagagatctacctgg 577 |||||||||| ||| ||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 49571 caaagattgggtgaagacaatccaaaatgaatggaggcttctacagaaagatctacctgg 49512 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 578 atctatatatgttagagtttatgaggacaggattgatctgct 619 |||||| |||||||||||||||||||| |||||||||||||| Sbjct: 48858 atctatctatgttagagtttatgaggataggattgatctgct 48817
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 115 bits (58), Expect = 2e-22 Identities = 190/234 (81%) Strand = Plus / Minus Query: 279 gctccacaccccactgcaaatgtccttgcaagtaacattcttttggatccctgttcaagt 338 |||||||||||||||||||||||| ||| |||| ||||||||||||| ||||| | Sbjct: 26630179 gctccacaccccactgcaaatgtcagcacaaacaacagccttttggatcccttttcaact 26630120 Query: 339 ggggctggcaatgtgctatcactgcaaaaacatgagcctgaatgttcaagtaatatctca 398 ||| ||| | ||||||||| ||||||||||||||||||||||||||||| ||| ||| Sbjct: 26630119 gggaatggtactgtgctatctgtgcaaaaacatgagcctgaatgttcaagtgttatatca 26630060 Query: 399 tcaacgataaaggcagtagatggatctgaagatgaggatcacaagttatttaaccaattt 458 |||| || || | ||| | |||||| |||| ||| | | ||| || |||| ||| ||| Sbjct: 26630059 tcaatgacaaggacagaatatggatttgaaagtgatggttgcaatttgtttagccatttt 26630000 Query: 459 gacgttgttcaagattactcagaccaccactatgcaaagacctcaccagggaag 512 || ||||||||||||| || ||||| |||||||||||| |||||||||||| Sbjct: 26629999 gatgttgttcaagatttttctgaccattactatgcaaagaattcaccagggaag 26629946 Score = 79.8 bits (40), Expect = 1e-11 Identities = 55/60 (91%) Strand = Plus / Minus Query: 518 caaagattggacgaaaacaatccaaaatgaatggaagcttctacagagagatctacctgg 577 |||||||||| ||| ||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 26629853 caaagattgggtgaagacaatccaaaatgaatggaggcttctacagaaagatctacctgg 26629794 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 578 atctatatatgttagagtttatgaggacaggattgatctgct 619 |||||| |||||||||||||||||||| |||||||||||||| Sbjct: 26629140 atctatctatgttagagtttatgaggataggattgatctgct 26629099 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccg 100 |||||||||||||||||||| Sbjct: 32368395 ctcctccgccgccgcccccg 32368414 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccg 100 |||||||||||||||||||| Sbjct: 2414552 ctcctccgccgccgcccccg 2414571
>gb|AC084406.7|AC084406 Oryza sativa chromosome 3 BAC OSJNBa0067E01 genomic sequence, complete sequence Length = 140044 Score = 115 bits (58), Expect = 2e-22 Identities = 190/234 (81%) Strand = Plus / Plus Query: 279 gctccacaccccactgcaaatgtccttgcaagtaacattcttttggatccctgttcaagt 338 |||||||||||||||||||||||| ||| |||| ||||||||||||| ||||| | Sbjct: 127661 gctccacaccccactgcaaatgtcagcacaaacaacagccttttggatcccttttcaact 127720 Query: 339 ggggctggcaatgtgctatcactgcaaaaacatgagcctgaatgttcaagtaatatctca 398 ||| ||| | ||||||||| ||||||||||||||||||||||||||||| ||| ||| Sbjct: 127721 gggaatggtactgtgctatctgtgcaaaaacatgagcctgaatgttcaagtgttatatca 127780 Query: 399 tcaacgataaaggcagtagatggatctgaagatgaggatcacaagttatttaaccaattt 458 |||| || || | ||| | |||||| |||| ||| | | ||| || |||| ||| ||| Sbjct: 127781 tcaatgacaaggacagaatatggatttgaaagtgatggttgcaatttgtttagccatttt 127840 Query: 459 gacgttgttcaagattactcagaccaccactatgcaaagacctcaccagggaag 512 || ||||||||||||| || ||||| |||||||||||| |||||||||||| Sbjct: 127841 gatgttgttcaagatttttctgaccattactatgcaaagaattcaccagggaag 127894 Score = 79.8 bits (40), Expect = 1e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 518 caaagattggacgaaaacaatccaaaatgaatggaagcttctacagagagatctacctgg 577 |||||||||| ||| ||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 127987 caaagattgggtgaagacaatccaaaatgaatggaggcttctacagaaagatctacctgg 128046 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 578 atctatatatgttagagtttatgaggacaggattgatctgct 619 |||||| |||||||||||||||||||| |||||||||||||| Sbjct: 128700 atctatctatgttagagtttatgaggataggattgatctgct 128741
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 115 bits (58), Expect = 2e-22 Identities = 190/234 (81%) Strand = Plus / Minus Query: 279 gctccacaccccactgcaaatgtccttgcaagtaacattcttttggatccctgttcaagt 338 |||||||||||||||||||||||| ||| |||| ||||||||||||| ||||| | Sbjct: 26721502 gctccacaccccactgcaaatgtcagcacaaacaacagccttttggatcccttttcaact 26721443 Query: 339 ggggctggcaatgtgctatcactgcaaaaacatgagcctgaatgttcaagtaatatctca 398 ||| ||| | ||||||||| ||||||||||||||||||||||||||||| ||| ||| Sbjct: 26721442 gggaatggtactgtgctatctgtgcaaaaacatgagcctgaatgttcaagtgttatatca 26721383 Query: 399 tcaacgataaaggcagtagatggatctgaagatgaggatcacaagttatttaaccaattt 458 |||| || || | ||| | |||||| |||| ||| | | ||| || |||| ||| ||| Sbjct: 26721382 tcaatgacaaggacagaatatggatttgaaagtgatggttgcaatttgtttagccatttt 26721323 Query: 459 gacgttgttcaagattactcagaccaccactatgcaaagacctcaccagggaag 512 || ||||||||||||| || ||||| |||||||||||| |||||||||||| Sbjct: 26721322 gatgttgttcaagatttttctgaccattactatgcaaagaattcaccagggaag 26721269 Score = 79.8 bits (40), Expect = 1e-11 Identities = 55/60 (91%) Strand = Plus / Minus Query: 518 caaagattggacgaaaacaatccaaaatgaatggaagcttctacagagagatctacctgg 577 |||||||||| ||| ||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 26721176 caaagattgggtgaagacaatccaaaatgaatggaggcttctacagaaagatctacctgg 26721117 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 578 atctatatatgttagagtttatgaggacaggattgatctgct 619 |||||| |||||||||||||||||||| |||||||||||||| Sbjct: 26720463 atctatctatgttagagtttatgaggataggattgatctgct 26720422 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccg 100 |||||||||||||||||||| Sbjct: 32458905 ctcctccgccgccgcccccg 32458924 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccg 100 |||||||||||||||||||| Sbjct: 2414662 ctcctccgccgccgcccccg 2414681
>gb|AY103910.1| Zea mays PCO104496 mRNA sequence Length = 1523 Score = 109 bits (55), Expect = 1e-20 Identities = 139/167 (83%) Strand = Plus / Plus Query: 453 caatttgacgttgttcaagattactcagaccaccactatgcaaagacctcaccagggaag 512 |||||||| ||||| ||||||| ||| || ||||||||||||||||| ||| |||| ||| Sbjct: 466 caatttgatgttgtccaagatttctcggatcaccactatgcaaagacttcagcaggaaag 525 Query: 513 acgagcaaagattggacgaaaacaatccaaaatgaatggaagcttctacagagagatcta 572 | || |||||| ||| ||||||||| ||||||| | |||||||||| | | ||| Sbjct: 526 gtcacaaaggattgggtgaaggcaatccaaagtgaatgggatcttctacagaaaaaccta 585 Query: 573 cctggatctatatatgttagagtttatgaggacaggattgatctgct 619 |||| ||||||||| |||||||| ||||||||||||| ||||||||| Sbjct: 586 cctgaatctatatacgttagagtctatgaggacaggactgatctgct 632 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 320 tttggatccctgttcaagtggg 341 |||||||||||||||||||||| Sbjct: 336 tttggatccctgttcaagtggg 357
>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485D09 Length = 150594 Score = 103 bits (52), Expect = 7e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 279 gctccacaccccactgcaaatgtccttgcaagtaacattcttttggatccctgttcaagt 338 |||||||||||||||||||||||| | ||| |||| ||||||||||||| ||||| | Sbjct: 94117 gctccacaccccactgcaaatgtcagtacaaacaacagccttttggatcccttttcaact 94176 Query: 339 ggggctggcaatgtgctatcactgcaaaaacatgagcctgaatgttcaagtaatatctca 398 ||| ||| | ||||||||| ||||||||||||||||||||||||||||| ||| ||| Sbjct: 94177 gggaatggtactgtgctatctgtgcaaaaacatgagcctgaatgttcaagtgttatatca 94236 Query: 399 tcaa 402 |||| Sbjct: 94237 tcaa 94240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 518 caaagattggacgaaaacaatccaaaatgaatggaagcttctacagagagatctacctgg 577 |||||||||| ||| |||||||| |||||||||| ||||||||||| |||||||||||| Sbjct: 94440 caaagattgggtgaagacaatccagaatgaatggaggcttctacagaaagatctacctgg 94499 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 578 atctatatatgttagagtttatgaggacaggattgatctgct 619 |||||| |||||||||||||||||||| |||||||||||||| Sbjct: 95154 atctatctatgttagagtttatgaggataggattgatctgct 95195
>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431F01 Length = 143209 Score = 103 bits (52), Expect = 7e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 279 gctccacaccccactgcaaatgtccttgcaagtaacattcttttggatccctgttcaagt 338 |||||||||||||||||||||||| | ||| |||| ||||||||||||| ||||| | Sbjct: 899 gctccacaccccactgcaaatgtcagtacaaacaacagccttttggatcccttttcaact 958 Query: 339 ggggctggcaatgtgctatcactgcaaaaacatgagcctgaatgttcaagtaatatctca 398 ||| ||| | ||||||||| ||||||||||||||||||||||||||||| ||| ||| Sbjct: 959 gggaatggtactgtgctatctgtgcaaaaacatgagcctgaatgttcaagtgttatatca 1018 Query: 399 tcaa 402 |||| Sbjct: 1019 tcaa 1022 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 518 caaagattggacgaaaacaatccaaaatgaatggaagcttctacagagagatctacctgg 577 |||||||||| ||| |||||||| |||||||||| ||||||||||| |||||||||||| Sbjct: 1222 caaagattgggtgaagacaatccagaatgaatggaggcttctacagaaagatctacctgg 1281 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 578 atctatatatgttagagtttatgaggacaggattgatctgct 619 |||||| |||||||||||||||||||| |||||||||||||| Sbjct: 1936 atctatctatgttagagtttatgaggataggattgatctgct 1977
>ref|NM_188607.1| Oryza sativa (japonica cultivar-group), Ozsa8210 predicted mRNA Length = 1869 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 318 cttttggatccctgttcaagtggggctggcaatgtgctatcactgcaaaaacatgagcct 377 ||||||||||||| ||||| |||| ||| | ||||||||| ||||||||||||||||| Sbjct: 382 cttttggatcccttttcaactgggaatggtactgtgctatctgtgcaaaaacatgagcct 441 Query: 378 gaatgttcaagtaatatctcatcaa 402 |||||||||||| ||| ||||||| Sbjct: 442 gaatgttcaagtgttatatcatcaa 466 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 578 atctatatatgttagagtttatgaggacaggattgatctgct 619 |||||| |||||||||||||||||||| |||||||||||||| Sbjct: 609 atctatctatgttagagtttatgaggataggattgatctgct 650
>ref|XM_467546.1| Oryza sativa (japonica cultivar-group), mRNA Length = 537 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 350 tgtgctatcactgcaaaaacatgagcctgaatgttcaagt 389 |||||||||| | |||||||||||| |||||||||||||| Sbjct: 152 tgtgctatcagttcaaaaacatgaggctgaatgttcaagt 113
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 350 tgtgctatcactgcaaaaacatgagcctgaatgttcaagt 389 |||||||||| | |||||||||||| |||||||||||||| Sbjct: 30097586 tgtgctatcagttcaaaaacatgaggctgaatgttcaagt 30097547 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Plus Query: 350 tgtgctatcactgcaaaaacatgagcctgaatgttcaagt 389 |||||||||| | |||||||||| | |||||||||||||| Sbjct: 30103791 tgtgctatcagttcaaaaacatggggctgaatgttcaagt 30103830
>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0685G12 Length = 149155 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 350 tgtgctatcactgcaaaaacatgagcctgaatgttcaagt 389 |||||||||| | |||||||||||| |||||||||||||| Sbjct: 77183 tgtgctatcagttcaaaaacatgaggctgaatgttcaagt 77144 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Plus Query: 350 tgtgctatcactgcaaaaacatgagcctgaatgttcaagt 389 |||||||||| | |||||||||| | |||||||||||||| Sbjct: 83388 tgtgctatcagttcaaaaacatggggctgaatgttcaagt 83427
>gb|AY258009.2| Streptomyces clavuligerus clavulanic acid biosynthetic gene cluster, partial sequence Length = 13901 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 24 ctaccccggccccggcggcgcca 46 ||||||||||||||||||||||| Sbjct: 10904 ctaccccggccccggcggcgcca 10926
>emb|AL356307.10| Human DNA sequence from clone RP11-393M20 on chromosome 10, complete sequence Length = 83539 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 439 acaagttatttaaccaatttgac 461 ||||||||||||||||||||||| Sbjct: 17890 acaagttatttaaccaatttgac 17912
>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 210 aagaaaaagaagaagaattccaacaagaaa 239 ||||||||||||||||| |||| ||||||| Sbjct: 2061382 aagaaaaagaagaagaaatccaccaagaaa 2061411
>ref|XM_475107.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 609 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccgac 102 |||||||||||||||||||||| Sbjct: 330 ctcctccgccgccgcccccgac 351
>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07, complete sequence Length = 151399 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccgactccgtcct 110 |||||||||||||||| ||||| ||||||| Sbjct: 61684 ctcctccgccgccgccgccgacgccgtcct 61713
>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08, complete sequence Length = 142196 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 81 ctcctccgccgccgcccccgactccg 106 |||||||||||||||||||| ||||| Sbjct: 112311 ctcctccgccgccgcccccgcctccg 112286
>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10, complete sequence Length = 148373 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccgac 102 |||||||||||||||||||||| Sbjct: 25358 ctcctccgccgccgcccccgac 25379
>ref|XM_643453.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (436.t00006) partial mRNA Length = 708 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 218 gaagaagaattccaacaagaaa 239 |||||||||||||||||||||| Sbjct: 550 gaagaagaattccaacaagaaa 571
>gb|AC004413.2| Homo sapiens PAC clone RP4-650P9 from 7, complete sequence Length = 114827 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 210 aagaaaaagaagaagaattccaacaa 235 ||||| |||||||||||||||||||| Sbjct: 54800 aagaagaagaagaagaattccaacaa 54775
>emb|AL731614.4|OSJN00260 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079F16, complete sequence Length = 157801 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 84 ctccgccgccgcccccgactcc 105 |||||||||||||||||||||| Sbjct: 77909 ctccgccgccgcccccgactcc 77930
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 84 ctccgccgccgcccccgactcc 105 |||||||||||||||||||||| Sbjct: 11909314 ctccgccgccgcccccgactcc 11909335 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 tccgccgccgcccccgactc 104 |||||||||||||||||||| Sbjct: 14421210 tccgccgccgcccccgactc 14421229 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 aattccaacaagaaaggcaa 244 |||||||||||||||||||| Sbjct: 612372 aattccaacaagaaaggcaa 612391
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 81 ctcctccgccgccgcccccgactccg 106 |||||||||||||||||||| ||||| Sbjct: 29333654 ctcctccgccgccgcccccgcctccg 29333629 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccgac 102 |||||||||||||||||||||| Sbjct: 17031991 ctcctccgccgccgcccccgac 17032012 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccgactccgtcct 110 |||||||||||||||| ||||| ||||||| Sbjct: 1968807 ctcctccgccgccgccgccgacgccgtcct 1968836 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccg 100 |||||||||||||||||||| Sbjct: 12472532 ctcctccgccgccgcccccg 12472551 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 81 ctcctccgccgccgcccccgactccgtc 108 |||| |||||||||||| |||||||||| Sbjct: 2529226 ctccgccgccgccgcccgcgactccgtc 2529199
>gb|AF310619.1|AF310619 Pseudorabies virus Ea UL52 gene, partial cds Length = 939 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccgac 102 |||||||||||||||||||||| Sbjct: 15 ctcctccgccgccgcccccgac 36
>dbj|AK106046.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-E07, full insert sequence Length = 1273 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccgac 102 |||||||||||||||||||||| Sbjct: 543 ctcctccgccgccgcccccgac 564
>dbj|AK102034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033081B21, full insert sequence Length = 1312 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccgactccgtcct 110 |||||||||||||||| ||||| ||||||| Sbjct: 520 ctcctccgccgccgccgccgacgccgtcct 549
>dbj|AK099362.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048I06, full insert sequence Length = 1345 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccgactccgtcct 110 |||||||||||||||| ||||| ||||||| Sbjct: 551 ctcctccgccgccgccgccgacgccgtcct 580
>dbj|AK064360.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-B09, full insert sequence Length = 1365 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccgactccgtcct 110 |||||||||||||||| ||||| ||||||| Sbjct: 550 ctcctccgccgccgccgccgacgccgtcct 579
>dbj|AK059115.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-E07, full insert sequence Length = 655 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccgactccg 106 |||||||||||||||||||| ||||| Sbjct: 41 ctcctccgccgccgcccccgcctccg 66
>tpe|BN000595.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx66 gene for class III peroxidase 66, exons 1-2 Length = 1925 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccgactccgtcct 110 |||||||||||||||| ||||| ||||||| Sbjct: 1337 ctcctccgccgccgccgccgacgccgtcct 1366
>emb|AL356021.4|CNS05TDB Human chromosome 14 DNA sequence BAC R-783L4 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 184656 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 439 acaagttatttaaccaatttga 460 |||||||||||||||||||||| Sbjct: 106656 acaagttatttaaccaatttga 106635
>gb|AC152974.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0153K02, complete sequence Length = 40117 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccgac 102 |||||||||||||||||||||| Sbjct: 33255 ctcctccgccgccgcccccgac 33276
>ref|XM_361425.1| Magnaporthe grisea 70-15 hypothetical protein (MG03899.4) partial mRNA Length = 3927 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccgccgccgcccccgactccg 106 ||||||||||||||||||||| Sbjct: 44 ccgccgccgcccccgactccg 64
>ref|XM_954385.1| Neurospora crassa OR74A hypothetical protein (NCU02315.1) partial mRNA Length = 4173 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 tggcaagaaaaagaagaagaa 226 ||||||||||||||||||||| Sbjct: 354 tggcaagaaaaagaagaagaa 374
>ref|XM_331090.1| Neurospora crassa OR74A hypothetical protein (NCU02315.1) partial mRNA Length = 4173 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 tggcaagaaaaagaagaagaa 226 ||||||||||||||||||||| Sbjct: 354 tggcaagaaaaagaagaagaa 374
>emb|Z82248.1|HSN44A4 Human DNA sequence from clone LL22NC03-44A4 on chromosome 22 Contains the YWHAH gene for tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta polypeptide, the C22orf24 gene for chromosome 22 open reading frame 24 and a CpG island, complete sequence Length = 40662 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 483 caccactatgcaaagacctca 503 ||||||||||||||||||||| Sbjct: 14021 caccactatgcaaagacctca 14001
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome Length = 2575032 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 tctcaagaagctgcttcaactcttt 200 |||||||||||| |||||||||||| Sbjct: 817899 tctcaagaagctccttcaactcttt 817875
>emb|AJ704766.1| Homo sapiens mRNA for hypothetical protein (C22ORF24_v2), splice variant 2 Length = 610 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 caccactatgcaaagacctca 503 ||||||||||||||||||||| Sbjct: 322 caccactatgcaaagacctca 342
>emb|AJ704765.1| Homo sapiens mRNA for hypothetical protein (C22ORF24_v1), splice variant 1 Length = 683 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 caccactatgcaaagacctca 503 ||||||||||||||||||||| Sbjct: 395 caccactatgcaaagacctca 415
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 aagaaaaagaagaagaattcc 230 ||||||||||||||||||||| Sbjct: 578543 aagaaaaagaagaagaattcc 578523 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 ctgctcctccgccgccgccc 97 |||||||||||||||||||| Sbjct: 27623707 ctgctcctccgccgccgccc 27623688
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 83 cctccgccgccgcccccgactccgt 107 |||||||||||||||||||| |||| Sbjct: 4312131 cctccgccgccgcccccgacaccgt 4312107
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 tggcaagaaaaagaagaagaa 226 ||||||||||||||||||||| Sbjct: 2549916 tggcaagaaaaagaagaagaa 2549936
>dbj|AP002805.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0004I20 Length = 94135 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 aagaaaaagaagaagaattcc 230 ||||||||||||||||||||| Sbjct: 55160 aagaaaaagaagaagaattcc 55140
>dbj|AP000616.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0514G12 Length = 138929 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 aagaaaaagaagaagaattcc 230 ||||||||||||||||||||| Sbjct: 124051 aagaaaaagaagaagaattcc 124031
>gb|BC069919.1| Mus musculus casein kinase II, alpha 1 polypeptide, mRNA (cDNA clone IMAGE:4240685), partial cds Length = 474 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 tccggtctgctcctccgccgccgcc 96 |||||||| |||||||||||||||| Sbjct: 9 tccggtctcctcctccgccgccgcc 33
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 tcctccgccgccgcccccgac 102 ||||||||||||||||||||| Sbjct: 1307106 tcctccgccgccgcccccgac 1307086
>gb|AC145935.3| Gallus gallus BAC clone CH261-42P15 from chromosome unknown, complete sequence Length = 194387 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 gctcctccgccgccgcccccg 100 ||||||||||||||||||||| Sbjct: 150961 gctcctccgccgccgcccccg 150941
>emb|AL050256.1|HSN44A4A Novel human gene mapping to chomosome 22 Length = 1247 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 caccactatgcaaagacctca 503 ||||||||||||||||||||| Sbjct: 432 caccactatgcaaagacctca 452
>dbj|AB027371.1| Cordyceps kanzashiana genes for 18S rRNA, 5.8S rRNA, 28S rRNA, partial and complete sequences Length = 1781 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccga 101 ||||||||||||||||||||| Sbjct: 661 ctcctccgccgccgcccccga 681
>ref|NM_101422.1| Arabidopsis thaliana carbohydrate binding / kinase AT1G15530 mRNA, complete cds Length = 1971 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 caagtaacattcttttggat 326 |||||||||||||||||||| Sbjct: 1463 caagtaacattcttttggat 1482
>ref|XM_638056.1| Dictyostelium discoideum hypothetical protein (DDB0217819), partial mRNA Length = 6315 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aaaacaatccaaaatgaatg 550 |||||||||||||||||||| Sbjct: 3753 aaaacaatccaaaatgaatg 3734
>ref|XM_475092.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2172 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctcctccgccgccgcccccg 100 |||||||||||||||||||| Sbjct: 46 ctcctccgccgccgcccccg 27
>ref|XM_480167.1| Oryza sativa (japonica cultivar-group), mRNA Length = 468 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 ctgctcctccgccgccgccc 97 |||||||||||||||||||| Sbjct: 213 ctgctcctccgccgccgccc 194
>ref|NM_197891.1| Oryza sativa (japonica cultivar-group) putative proline and glutamic acid rich nuclear protein (OSJNBa0027L23.10), mRNA Length = 1196 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cctccgccgccgcccccgac 102 |||||||||||||||||||| Sbjct: 50 cctccgccgccgcccccgac 69
>ref|NM_193786.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 540 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 accccggccccggcggcgcc 45 |||||||||||||||||||| Sbjct: 52 accccggccccggcggcgcc 71
>ref|NM_190002.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1500 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccgactc 104 |||||||||||||||| ||||||| Sbjct: 114 ctcctccgccgccgccgccgactc 137
>gb|AY557618.1| Homo sapiens autoantigen Fw29a1 mRNA, partial cds Length = 571 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 aatggaagcttctacagaga 566 |||||||||||||||||||| Sbjct: 164 aatggaagcttctacagaga 183
>gb|AY617598.1| Sterkiella histriomuscorum clone UGC1O0003_J06_F genomic sequence Length = 776 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 ggcaagaaaaagaagaagaa 226 |||||||||||||||||||| Sbjct: 171 ggcaagaaaaagaagaagaa 152
>gb|AC165138.6| Mus musculus chromosome 15, clone RP24-61P10, complete sequence Length = 170282 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ggcaagaaaaagaagaagaa 226 |||||||||||||||||||| Sbjct: 63398 ggcaagaaaaagaagaagaa 63417
>gb|AC147460.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAb0050G15, complete sequence Length = 126156 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 tgctcctccgccgccgcccc 98 |||||||||||||||||||| Sbjct: 99492 tgctcctccgccgccgcccc 99511
>gb|AC124142.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0015A05, complete sequence Length = 127330 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 81 ctcctccgccgccgcccccgactccgtc 108 |||| |||||||||||| |||||||||| Sbjct: 14112 ctccgccgccgccgcccgcgactccgtc 14085
>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete sequence Length = 145507 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccg 100 |||||||||||||||||||| Sbjct: 20523 ctcctccgccgccgcccccg 20542
>ref|XM_953978.1| Neurospora crassa OR74A hypothetical protein (NCU09161.1) partial mRNA Length = 1224 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 ctcctccgccgccgcccccgactc 104 |||||||||||||||||| ||||| Sbjct: 1206 ctcctccgccgccgcccctgactc 1183
>ref|XM_609134.2| PREDICTED: Bos taurus similar to Inner nuclear membrane protein Man1 (LEM domain containing protein 3) (LOC530659), mRNA Length = 4809 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 78 ctgctcctccgccgccgcccccgactcc 105 ||||||| ||||||||||| |||||||| Sbjct: 1047 ctgctccgccgccgccgccgccgactcc 1020
>ref|XM_331552.1| Neurospora crassa OR74A hypothetical protein (NCU09161.1) partial mRNA Length = 1224 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 ctcctccgccgccgcccccgactc 104 |||||||||||||||||| ||||| Sbjct: 1206 ctcctccgccgccgcccctgactc 1183
>gb|AC134471.3| Mus musculus BAC clone RP23-121J12 from chromosome 17, complete sequence Length = 176628 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 tcaagtaatatctcatcaac 403 |||||||||||||||||||| Sbjct: 176143 tcaagtaatatctcatcaac 176124
>gb|AC133946.3| Mus musculus BAC clone RP24-188D7 from chromosome 17, complete sequence Length = 170090 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 tggcaagaaaaagaagaagaattc 229 |||||| ||||||||||||||||| Sbjct: 102031 tggcaacaaaaagaagaagaattc 102008
>gb|AC142213.3| Mus musculus BAC clone RP24-460K23 from chromosome 17, complete sequence Length = 166244 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 tcaagtaatatctcatcaac 403 |||||||||||||||||||| Sbjct: 145219 tcaagtaatatctcatcaac 145238
>gb|AC135428.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0628H02, complete sequence Length = 65115 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccg 100 |||||||||||||||||||| Sbjct: 6070 ctcctccgccgccgcccccg 6089
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cttgatcgtgctggtgattt 144 |||||||||||||||||||| Sbjct: 1823591 cttgatcgtgctggtgattt 1823572
>ref|XM_817657.1| Trypanosoma brucei TREU927 ubiquitin/ribosomal protein S27a (Tb10.70.2170) partial mRNA Length = 456 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ggcaagaaaaagaagaagaa 226 |||||||||||||||||||| Sbjct: 217 ggcaagaaaaagaagaagaa 236
>gb|AC127292.4| Mus musculus BAC clone RP23-375J3 from chromosome 9, complete sequence Length = 157088 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 aagaaaaagaagaagaattc 229 |||||||||||||||||||| Sbjct: 146614 aagaaaaagaagaagaattc 146595
>gb|AC146680.3| Gasterosteus aculeatus clone CH213-10I3, complete sequence Length = 214256 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 tgcaaaaacatgagcctgaa 380 |||||||||||||||||||| Sbjct: 44842 tgcaaaaacatgagcctgaa 44823
>ref|XM_721663.1| Plasmodium yoelii yoelii str. 17XNL translation elongation factor 1 beta (PY06160) partial mRNA Length = 568 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 caagaaaaagaagaagaatt 228 |||||||||||||||||||| Sbjct: 352 caagaaaaagaagaagaatt 371
>ref|XM_720865.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05493) partial mRNA Length = 1785 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ggcaagaaaaagaagaagaa 226 |||||||||||||||||||| Sbjct: 1460 ggcaagaaaaagaagaagaa 1479
>gb|AC147499.5| Medicago truncatula clone mth2-22h5, complete sequence Length = 128625 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 aagaaaaagaagaagaattc 229 |||||||||||||||||||| Sbjct: 49701 aagaaaaagaagaagaattc 49720
>gb|DQ446253.1| Arabidopsis thaliana clone pENTR221-At1g15530 receptor lectin kinase (At1g15530) mRNA, complete cds Length = 1971 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 caagtaacattcttttggat 326 |||||||||||||||||||| Sbjct: 1463 caagtaacattcttttggat 1482
>emb|AJ508280.1|ONO508280 Oxytricha nova mRNA for high mobility group protein (hmgb gene) Length = 1606 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ggcaagaaaaagaagaagaa 226 |||||||||||||||||||| Sbjct: 650 ggcaagaaaaagaagaagaa 669
>ref|XM_794918.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC578756 (LOC578756), mRNA Length = 1320 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ggcaagaaaaagaagaagaa 226 |||||||||||||||||||| Sbjct: 679 ggcaagaaaaagaagaagaa 698
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 tccgccttgatcgtgctggtgatt 143 |||||||||||||||||| ||||| Sbjct: 2404146 tccgccttgatcgtgctgatgatt 2404169
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccg 100 |||||||||||||||||||| Sbjct: 102162 ctcctccgccgccgcccccg 102181
>gb|AC123524.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C03, complete sequence Length = 157178 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 tgctcctccgccgccgcccc 98 |||||||||||||||||||| Sbjct: 33336 tgctcctccgccgccgcccc 33355
>ref|XM_786252.1| PREDICTED: Strongylocentrotus purpuratus similar to Ras-related protein Rab-7L1 (Rab-7 like protein 1) (LOC586472), mRNA Length = 1554 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ggcaagaaaaagaagaagaa 226 |||||||||||||||||||| Sbjct: 913 ggcaagaaaaagaagaagaa 932
>gb|AC068295.15| Homo sapiens 3 BAC RP11-44H4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170867 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 aagaaaaagaagaagaattc 229 |||||||||||||||||||| Sbjct: 115011 aagaaaaagaagaagaattc 114992
>emb|AL109797.18|HS1172N10 Human DNA sequence from clone RP5-1172N10 on chromosome Xp11.3-11.4 Contains the 3' end of the USP9X gene for X chromosome ubiquitin specific protease 9 (fat facets-like Drosophila), a novel gene and a CpG island, complete sequence Length = 129293 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 547 aatggaagcttctacagaga 566 |||||||||||||||||||| Sbjct: 128732 aatggaagcttctacagaga 128713
>emb|AL050323.6|HSJ793N16 Human DNA sequence from clone RP4-793N16 on chromosome 20 Contains the 5' end of pseudogene PHKBP1 (phosphorylase kinase, beta pseudogene 1), the 5' end of the PLCB1 gene for phospholipase C beta 1 (phosphoinositide-specific) and two CpG islands, complete sequence Length = 51248 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 tctgctcctccgccgccgcc 96 |||||||||||||||||||| Sbjct: 33016 tctgctcctccgccgccgcc 32997
>gb|AC027037.6| Oryza sativa chromosome 10 BAC OSJNBa0035H01 genomic sequence, complete sequence Length = 64582 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cctccgccgccgcccccgac 102 |||||||||||||||||||| Sbjct: 2866 cctccgccgccgcccccgac 2847
>emb|Y00354.1|XLVIT2A Xenopus laevis gene encoding vitellogenin A2 Length = 18488 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 aaagaagaagaattccaaca 234 |||||||||||||||||||| Sbjct: 10544 aaagaagaagaattccaaca 10563
>emb|X93923.1|AVPSAFJ A.variabilis psaF and psaJ genes Length = 1337 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 cttgatcgtgctggtgattt 144 |||||||||||||||||||| Sbjct: 743 cttgatcgtgctggtgattt 762
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 ttggagttggcaagaaaaag 218 |||||||||||||||||||| Sbjct: 1884797 ttggagttggcaagaaaaag 1884778
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gccgccgcccccgactccgtcctg 111 ||||||||||||||| |||||||| Sbjct: 127237 gccgccgcccccgacaccgtcctg 127260
>emb|AL662986.3|OSJN00187 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087H01, complete sequence Length = 166906 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 tccgccgccgcccccgactc 104 |||||||||||||||||||| Sbjct: 154129 tccgccgccgcccccgactc 154148
>emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H06, complete sequence Length = 143730 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 aattccaacaagaaaggcaa 244 |||||||||||||||||||| Sbjct: 143339 aattccaacaagaaaggcaa 143358
>gb|AC100861.2| Homo sapiens chromosome 8, clone RP11-1149O23, complete sequence Length = 164692 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 ttccaacaagaaaggcaagt 246 |||||||||||||||||||| Sbjct: 38947 ttccaacaagaaaggcaagt 38928
>gb|DQ397590.1| Cenarchaeum symbiosum clone C01G02, complete sequence Length = 39399 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctcctccgccgccgcccccg 100 |||||||||||||||||||| Sbjct: 27725 ctcctccgccgccgcccccg 27706
>gb|AC137080.13| Medicago truncatula clone mth2-9a7, complete sequence Length = 129121 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 aagaaaaagaagaagaattc 229 |||||||||||||||||||| Sbjct: 127614 aagaaaaagaagaagaattc 127633
>gb|AC104237.2| Homo sapiens chromosome 11, clone RP11-35J10, complete sequence Length = 164732 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 gcccttcccttccctacccc 30 |||||||||||||||||||| Sbjct: 154219 gcccttcccttccctacccc 154238
>gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L23 genomic sequence, complete sequence Length = 143961 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cctccgccgccgcccccgac 102 |||||||||||||||||||| Sbjct: 139571 cctccgccgccgcccccgac 139552
>gb|AC163694.2| Mus musculus BAC clone RP24-80O2 from chromosome 16, complete sequence Length = 244730 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 aagaaaaagaagaagaattc 229 |||||||||||||||||||| Sbjct: 83508 aagaaaaagaagaagaattc 83489
>gb|S90875.1| zygote-specific class V copy A gene {pseudogene} [Chlamydomonas reinhardtii, 137c, Genomic, 1505 nt] Length = 1505 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cctccgccgccgcccccgac 102 |||||||||||||||||||| Sbjct: 94 cctccgccgccgcccccgac 75
>gb|AC139044.6| Mus musculus chromosome 15, clone RP23-249A8, complete sequence Length = 148569 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 ggcaagaaaaagaagaagaa 226 |||||||||||||||||||| Sbjct: 14037 ggcaagaaaaagaagaagaa 14018
>gb|AC159738.2| Mus musculus BAC clone RP24-372O2 from chromosome 9, complete sequence Length = 147599 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 aagaaaaagaagaagaattc 229 |||||||||||||||||||| Sbjct: 79416 aagaaaaagaagaagaattc 79435
>gb|AC009338.12|AC009338 Drosophila melanogaster, chromosome 3R, region 99E-99E, BAC clone BACR08B24, complete sequence Length = 157235 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ttggcaagaaaaagaagaag 224 |||||||||||||||||||| Sbjct: 35844 ttggcaagaaaaagaagaag 35863
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 74 cggtctgctcctccgccgccgcccccga 101 |||||| |||||||||||||||| |||| Sbjct: 15217384 cggtctcctcctccgccgccgccgccga 15217357 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctcctccgccgccgcccccg 100 |||||||||||||||||||| Sbjct: 2658818 ctcctccgccgccgcccccg 2658799
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 tgctcctccgccgccgcccc 98 |||||||||||||||||||| Sbjct: 6250058 tgctcctccgccgccgcccc 6250077
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cctccgccgccgcccccgac 102 |||||||||||||||||||| Sbjct: 22487148 cctccgccgccgcccccgac 22487129
>gb|AC122149.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083D24, complete sequence Length = 150503 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccg 100 |||||||||||||||||||| Sbjct: 131394 ctcctccgccgccgcccccg 131413
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctcctccgccgccgcccccg 100 |||||||||||||||||||| Sbjct: 604538 ctcctccgccgccgcccccg 604519
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 ctgctcctccgccgccgccc 97 |||||||||||||||||||| Sbjct: 3233539 ctgctcctccgccgccgccc 3233558
>gb|AY235138.1| Meleagris gallopavo clone MNT-169 microsatellite sequence Length = 1668 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 accccactgcaaatgtcctt 305 |||||||||||||||||||| Sbjct: 1606 accccactgcaaatgtcctt 1587
>gb|AC157525.2| Pan troglodytes BAC clone CH251-519D18 from chromosome unknown, complete sequence Length = 234137 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 gcaagaaaaagaagaagaat 227 |||||||||||||||||||| Sbjct: 42339 gcaagaaaaagaagaagaat 42320
>gb|AC114263.2| Dictyostelium discoideum chromosome 2 map 215673-367476 strain AX4, complete sequence Length = 151802 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aaaacaatccaaaatgaatg 550 |||||||||||||||||||| Sbjct: 106457 aaaacaatccaaaatgaatg 106438
>dbj|AB011153.3| Homo sapiens mRNA for KIAA0581 protein, partial cds Length = 7092 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 tctgctcctccgccgccgcc 96 |||||||||||||||||||| Sbjct: 75 tctgctcctccgccgccgcc 56
>dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0052O12 Length = 167881 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 ctcctccgccgccgcccccgactc 104 |||||||||||||||| ||||||| Sbjct: 58681 ctcctccgccgccgccgccgactc 58658
>gb|AC015912.16| Homo sapiens chromosome 17, clone RP11-670E13, complete sequence Length = 118172 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 228 tccaacaagaaaggcaagtccatc 251 ||||||||| |||||||||||||| Sbjct: 80106 tccaacaagcaaggcaagtccatc 80129
>gb|AC090197.23| Homo sapiens chromosome 8, clone RP11-177H13, complete sequence Length = 179322 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 ttccaacaagaaaggcaagt 246 |||||||||||||||||||| Sbjct: 46469 ttccaacaagaaaggcaagt 46488
>gb|AC013453.1|AC013453 Arabidopsis thaliana chromosome I BAC T16N11 genomic sequence, complete sequence Length = 91001 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 caagtaacattcttttggat 326 |||||||||||||||||||| Sbjct: 43843 caagtaacattcttttggat 43824
>dbj|AP003905.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1177_E11 Length = 92375 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 ctgctcctccgccgccgccc 97 |||||||||||||||||||| Sbjct: 89619 ctgctcctccgccgccgccc 89638
>dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504D03 Length = 139201 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 accccggccccggcggcgcc 45 |||||||||||||||||||| Sbjct: 110715 accccggccccggcggcgcc 110696
>dbj|AP005821.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0094B20 Length = 146270 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctcctccgccgccgcccccg 100 |||||||||||||||||||| Sbjct: 57548 ctcctccgccgccgcccccg 57529
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cttgatcgtgctggtgattt 144 |||||||||||||||||||| Sbjct: 111434 cttgatcgtgctggtgattt 111415
>dbj|AP006055.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0778G11 Length = 59211 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 ctgctcctccgccgccgccc 97 |||||||||||||||||||| Sbjct: 27890 ctgctcctccgccgccgccc 27871
>dbj|AK122076.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118P16, full insert sequence Length = 1366 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cctccgccgccgcccccgac 102 |||||||||||||||||||| Sbjct: 142 cctccgccgccgcccccgac 161
>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0438H08 Length = 148626 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 ctgctcctccgccgccgccc 97 |||||||||||||||||||| Sbjct: 11106 ctgctcctccgccgccgccc 11125
>ref|XM_559382.1| Anopheles gambiae str. PEST ENSANGP00000026836 (ENSANGG00000023779), partial mRNA Length = 710 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 gctcctccgccgccgccccc 99 |||||||||||||||||||| Sbjct: 30 gctcctccgccgccgccccc 11
>emb|X14549.1|CRRSP3 Chlamydomonas reinhardtii gene for radial spoke protein 3 Length = 3000 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 tctgctcctccgccgccgcc 96 |||||||||||||||||||| Sbjct: 2062 tctgctcctccgccgccgcc 2043
>dbj|AK099724.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089B16, full insert sequence Length = 2710 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccgactccgtc 108 |||| |||||||||||| |||||||||| Sbjct: 497 ctccgccgccgccgcccgcgactccgtc 524
>dbj|AK100478.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095B21, full insert sequence Length = 2683 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctcctccgccgccgcccccg 100 |||||||||||||||||||| Sbjct: 125 ctcctccgccgccgcccccg 106
>dbj|AK068877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001F01, full insert sequence Length = 869 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 accccggccccggcggcgcc 45 |||||||||||||||||||| Sbjct: 112 accccggccccggcggcgcc 131
>dbj|AK066141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055K23, full insert sequence Length = 1591 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccg 100 |||||||||||||||||||| Sbjct: 552 ctcctccgccgccgcccccg 571
>dbj|AK065187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E01, full insert sequence Length = 2356 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 aattccaacaagaaaggcaa 244 |||||||||||||||||||| Sbjct: 883 aattccaacaagaaaggcaa 864
>gb|AC144813.3| Mus musculus BAC clone RP24-324I23 from 9, complete sequence Length = 146104 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 aagaaaaagaagaagaattc 229 |||||||||||||||||||| Sbjct: 88644 aagaaaaagaagaagaattc 88663
>dbj|AK064295.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-A02, full insert sequence Length = 1371 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cctccgccgccgcccccgac 102 |||||||||||||||||||| Sbjct: 141 cctccgccgccgcccccgac 160
>dbj|AK058445.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-G05, full insert sequence Length = 850 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 accccggccccggcggcgcc 45 |||||||||||||||||||| Sbjct: 150 accccggccccggcggcgcc 169
>emb|AL442118.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0201G08, complete sequence Length = 121821 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 aattccaacaagaaaggcaa 244 |||||||||||||||||||| Sbjct: 86833 aattccaacaagaaaggcaa 86852
>gb|AE003773.2| Drosophila melanogaster chromosome 3R, section 111 of 118 of the complete sequence Length = 226904 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ttggcaagaaaaagaagaag 224 |||||||||||||||||||| Sbjct: 45583 ttggcaagaaaaagaagaag 45602
>gb|AC006249.1|AC006249 Homo sapiens chromosome 18, clone hRPK.430_E_17, complete sequence Length = 197082 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 gcaagaaaaagaagaagaat 227 |||||||||||||||||||| Sbjct: 179132 gcaagaaaaagaagaagaat 179151
>dbj|AP002789.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-716L7, complete sequence Length = 90000 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 ttccaacaagaaaggcaagt 246 |||||||||||||||||||| Sbjct: 60760 ttccaacaagaaaggcaagt 60779
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cctccgccgccgcccccgac 102 |||||||||||||||||||| Sbjct: 22499616 cctccgccgccgcccccgac 22499597
>gb|AC004584.1|AC004584 Homo sapiens chromosome 17, clone hRPC1107_A_17, complete sequence Length = 104871 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 tccaacaagaaaggcaagtccatc 251 ||||||||| |||||||||||||| Sbjct: 94326 tccaacaagcaaggcaagtccatc 94303
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 tgctcctccgccgccgcccc 98 |||||||||||||||||||| Sbjct: 6316525 tgctcctccgccgccgcccc 6316544
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 74 cggtctgctcctccgccgccgcccccga 101 |||||| |||||||||||||||| |||| Sbjct: 15171667 cggtctcctcctccgccgccgccgccga 15171640 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctcctccgccgccgcccccg 100 |||||||||||||||||||| Sbjct: 2658762 ctcctccgccgccgcccccg 2658743
>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136490 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcctccgccgccgcccccg 100 |||||||||||||||||||| Sbjct: 9191 ctcctccgccgccgcccccg 9210
>emb|AL844876.4|CNS08CAZ Oryza sativa chromosome 12, . BAC OSJNBa0063F10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153687 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 74 cggtctgctcctccgccgccgcccccga 101 |||||| |||||||||||||||| |||| Sbjct: 38534 cggtctcctcctccgccgccgccgccga 38561
>emb|AL606616.3|OSJN00070 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060M15, complete sequence Length = 119918 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 aattccaacaagaaaggcaa 244 |||||||||||||||||||| Sbjct: 3244 aattccaacaagaaaggcaa 3263
>emb|AL627101.25| Mouse DNA sequence from clone RP23-140F18 on chromosome 4, complete sequence Length = 132504 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 436 atcacaagttatttaaccaatttg 459 ||||||| |||||||||||||||| Sbjct: 3028 atcacaatttatttaaccaatttg 3051
>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151878 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctcctccgccgccgcccccg 100 |||||||||||||||||||| Sbjct: 27744 ctcctccgccgccgcccccg 27725
>gb|AC147447.3| Gallus gallus BAC clone CH261-9P3 from chromosome unknown, complete sequence Length = 162933 Score = 40.1 bits (20), Expect = 8.5 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 359 actgcaaaaacatgagcctgaatgttca 386 |||||||||||||||| ||||||||||| Sbjct: 146529 actgcaaaaacatgag-ctgaatgttca 146503
>emb|AL772393.11| Mouse DNA sequence from clone RP23-398D18 on chromosome 4, complete sequence Length = 207495 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 caaaatgaatggaagcttct 559 |||||||||||||||||||| Sbjct: 172554 caaaatgaatggaagcttct 172535
>emb|AL732443.6| Mouse DNA sequence from clone RP23-90H6 on chromosome X, complete sequence Length = 219342 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 tggagttggcaagaaaaaga 219 |||||||||||||||||||| Sbjct: 139252 tggagttggcaagaaaaaga 139271
>dbj|AB040471.1| Nicotiana tabacum mRNA for bZIP transcriptional activator RSG, complete cds Length = 1362 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctcctccgccgccgcccccg 100 |||||||||||||||||||| Sbjct: 521 ctcctccgccgccgcccccg 502 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,686,624 Number of Sequences: 3902068 Number of extensions: 7686624 Number of successful extensions: 284886 Number of sequences better than 10.0: 158 Number of HSP's better than 10.0 without gapping: 170 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 280773 Number of HSP's gapped (non-prelim): 4095 length of query: 623 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 600 effective length of database: 17,143,297,704 effective search space: 10285978622400 effective search space used: 10285978622400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
