ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26n08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1070 bits (540), Expect = 0.0 Identities = 545/547 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119985 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 119926 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119925 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 119866 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119865 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 119806 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119805 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 119746 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 119745 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 119686 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119685 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 119626 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 119625 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 119566 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119565 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 119506 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119505 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 119446 Query: 541 gaacgga 547 ||||||| Sbjct: 119445 gaacgga 119439 Score = 1070 bits (540), Expect = 0.0 Identities = 545/547 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94909 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 94968 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94969 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 95028 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95029 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 95088 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95089 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 95148 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 95149 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 95208 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95209 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 95268 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 95269 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 95328 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95329 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 95388 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95389 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 95448 Query: 541 gaacgga 547 ||||||| Sbjct: 95449 gaacgga 95455
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 118766 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 118707 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118706 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 118647 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118646 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 118587 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118586 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 118527 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 118526 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 118467 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118466 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 118407 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 118406 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 118347 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118346 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 118287 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118286 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 118227 Query: 541 gaacgga 547 ||||||| Sbjct: 118226 gaacgga 118220
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 119850 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 119791 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119790 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 119731 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119730 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 119671 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119670 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 119611 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 119610 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 119551 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119550 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 119491 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 119490 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 119431 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119430 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 119371 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119370 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 119311 Query: 541 gaacgga 547 ||||||| Sbjct: 119310 gaacgga 119304 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 95306 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 95365 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95366 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 95425 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95426 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 95485 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95486 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 95545 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 95546 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 95605 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95606 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 95665 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 95666 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 95725 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95726 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 95785 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95786 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 95845 Query: 541 gaacgga 547 ||||||| Sbjct: 95846 gaacgga 95852
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 119850 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 119791 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119790 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 119731 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119730 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 119671 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119670 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 119611 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 119610 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 119551 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119550 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 119491 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 119490 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 119431 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119430 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 119371 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119370 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 119311 Query: 541 gaacgga 547 ||||||| Sbjct: 119310 gaacgga 119304 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 95306 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 95365 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95366 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 95425 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95426 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 95485 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95486 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 95545 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 95546 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 95605 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95606 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 95665 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 95666 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 95725 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95726 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 95785 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95786 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 95845 Query: 541 gaacgga 547 ||||||| Sbjct: 95846 gaacgga 95852
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 119799 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 119740 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119739 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 119680 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119679 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 119620 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119619 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 119560 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 119559 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 119500 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119499 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 119440 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 119439 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 119380 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119379 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 119320 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119319 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 119260 Query: 541 gaacgga 547 ||||||| Sbjct: 119259 gaacgga 119253 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 95251 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 95310 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95311 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 95370 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95371 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 95430 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95431 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 95490 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 95491 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 95550 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95551 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 95610 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 95611 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 95670 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95671 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 95730 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95731 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 95790 Query: 541 gaacgga 547 ||||||| Sbjct: 95791 gaacgga 95797
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 31507884 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 31507943 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507944 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 31508003 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508004 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 31508063 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508064 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 31508123 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 31508124 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 31508183 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508184 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 31508243 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 31508244 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 31508303 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508304 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 31508363 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508364 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 31508423 Query: 541 gaacgga 547 ||||||| Sbjct: 31508424 gaacgga 31508430
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 84712 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 84653 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84652 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 84593 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84592 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 84533 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84532 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 84473 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 84472 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 84413 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84412 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 84353 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 84352 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 84293 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84292 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 84233 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84232 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 84173 Query: 541 gaacgga 547 ||||||| Sbjct: 84172 gaacgga 84166
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 119819 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 119760 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119759 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 119700 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119699 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 119640 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119639 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 119580 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 119579 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 119520 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119519 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 119460 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 119459 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 119400 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119399 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 119340 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119339 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 119280 Query: 541 gaacgga 547 ||||||| Sbjct: 119279 gaacgga 119273 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 95299 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 95358 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95359 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 95418 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95419 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 95478 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95479 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 95538 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 95539 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 95598 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95599 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 95658 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 95659 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 95718 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95719 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 95778 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95779 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 95838 Query: 541 gaacgga 547 ||||||| Sbjct: 95839 gaacgga 95845
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 122348 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 122407 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122408 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 122467 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122468 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 122527 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122528 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 122587 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 122588 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 122647 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122648 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 122707 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 122708 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 122767 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122768 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 122827 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122828 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 122887 Query: 541 gaacgga 547 ||||||| Sbjct: 122888 gaacgga 122894 Score = 1055 bits (532), Expect = 0.0 Identities = 543/547 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 14073 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 14132 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14133 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 14192 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14193 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 14252 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14253 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 14312 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 14313 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 14372 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 14373 agcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggctaaatac 14432 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 14433 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 14492 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14493 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 14552 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14553 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 14612 Query: 541 gaacgga 547 ||||||| Sbjct: 14613 gaacgga 14619
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 58538 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 58479 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58478 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 58419 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58418 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 58359 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58358 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 58299 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 58298 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 58239 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58238 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 58179 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 58178 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 58119 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58118 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 58059 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58058 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 57999 Query: 541 gaacgga 547 ||||||| Sbjct: 57998 gaacgga 57992
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 9268233 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 9268292 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268293 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 9268352 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268353 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 9268412 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268413 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 9268472 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 9268473 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 9268532 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268533 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 9268592 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 9268593 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 9268652 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268653 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 9268712 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268713 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 9268772 Query: 541 gaacgga 547 ||||||| Sbjct: 9268773 gaacgga 9268779 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 9227733 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 9227792 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227793 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 9227852 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227853 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 9227912 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227913 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 9227972 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 9227973 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 9228032 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228033 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 9228092 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 9228093 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 9228152 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228153 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 9228212 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228213 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 9228272 Query: 541 gaacgga 547 ||||||| Sbjct: 9228273 gaacgga 9228279 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 9164322 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 9164381 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164382 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 9164441 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164442 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 9164501 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164502 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 9164561 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 9164562 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 9164621 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164622 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 9164681 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 9164682 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 9164741 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164742 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 9164801 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164802 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 9164861 Query: 541 gaacgga 547 ||||||| Sbjct: 9164862 gaacgga 9164868 Score = 1055 bits (532), Expect = 0.0 Identities = 543/547 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 9056147 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 9056206 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056207 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 9056266 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056267 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 9056326 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056327 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 9056386 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 9056387 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 9056446 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9056447 agcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggctaaatac 9056506 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 9056507 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 9056566 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056567 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 9056626 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056627 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 9056686 Query: 541 gaacgga 547 ||||||| Sbjct: 9056687 gaacgga 9056693 Score = 159 bits (80), Expect = 1e-35 Identities = 100/107 (93%) Strand = Plus / Minus Query: 366 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagt 425 |||||| |||||||||||||| || |||||||||||| ||||||||||||| |||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 426 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 472 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 19938218 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 19938277 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938278 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 19938337 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938338 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 19938397 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938398 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 19938457 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 19938458 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 19938517 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938518 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 19938577 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 19938578 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 19938637 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938638 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 19938697 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938698 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 19938757 Query: 541 gaacgga 547 ||||||| Sbjct: 19938758 gaacgga 19938764 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 10277213 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 10277154 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277153 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 10277094 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277093 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 10277034 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277033 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 10276974 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 10276973 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 10276914 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276913 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 10276854 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 10276853 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 10276794 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276793 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 10276734 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276733 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 10276674 Query: 541 gaacgga 547 ||||||| Sbjct: 10276673 gaacgga 10276667 Score = 1055 bits (532), Expect = 0.0 Identities = 543/547 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 10387085 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 10387144 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387145 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 10387204 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387205 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 10387264 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387265 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 10387324 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 10387325 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 10387384 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387385 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 10387444 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 10387445 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgg 10387504 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387505 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 10387564 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387565 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 10387624 Query: 541 gaacgga 547 ||||||| Sbjct: 10387625 gaacgga 10387631 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 384 agtaccgtgagggaaaggtgaaaagaacccc 414 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 209 ttgtgctgctaggcgaagcggttgagtgc 237 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 31598400 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 31598459 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598460 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 31598519 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598520 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 31598579 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598580 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 31598639 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 31598640 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 31598699 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598700 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 31598759 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 31598760 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 31598819 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598820 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 31598879 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598880 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 31598939 Query: 541 gaacgga 547 ||||||| Sbjct: 31598940 gaacgga 31598946
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 33525716 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 33525775 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525776 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 33525835 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525836 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 33525895 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525896 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 33525955 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 33525956 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 33526015 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526016 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 33526075 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 33526076 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 33526135 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526136 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 33526195 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526196 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 33526255 Query: 541 gaacgga 547 ||||||| Sbjct: 33526256 gaacgga 33526262 Score = 295 bits (149), Expect = 8e-77 Identities = 157/160 (98%) Strand = Plus / Minus Query: 388 ccgtgagggaaaggtgaaaagaacccccantgggtagtgaaatagaacgtgaaaccgtgc 447 ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 448 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 507 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 508 gccggcgactcataggcagtggcttggttaagggaacgga 547 |||||||||||||||||||||||||||||||||||||||| Sbjct: 16677981 gccggcgactcataggcagtggcttggttaagggaacgga 16677942 Score = 188 bits (95), Expect = 1e-44 Identities = 106/110 (96%) Strand = Plus / Minus Query: 402 tgaaaagaacccccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 461 ||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 462 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 511 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 368 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 414 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 368 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 414 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 56.0 bits (28), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 395 ggaaaggtgaaaagaacccccantgggtagtgaaataga 433 |||||||||||||||||||| | | |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 47825 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 47766 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47765 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 47706 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47705 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 47646 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47645 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 47586 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 47585 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 47526 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47525 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 47466 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 47465 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 47406 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47405 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 47346 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47345 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 47286 Query: 541 gaacgga 547 ||||||| Sbjct: 47285 gaacgga 47279
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 70913 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 70972 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70973 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 71032 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71033 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 71092 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71093 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 71152 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 71153 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 71212 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71213 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 71272 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 71273 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 71332 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71333 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 71392 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71393 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 71452 Query: 541 gaacgga 547 ||||||| Sbjct: 71453 gaacgga 71459 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 368 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 414 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 368 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 414 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 85 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 144 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 204 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 264 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 324 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 325 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 384 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 444 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 445 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 504 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 505 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 564 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 565 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 624 Query: 541 gaacgga 547 ||||||| Sbjct: 625 gaacgga 631
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 19949494 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 19949553 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949554 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 19949613 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949614 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 19949673 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949674 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 19949733 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 19949734 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 19949793 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949794 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 19949853 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 19949854 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 19949913 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949914 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 19949973 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949974 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 19950033 Query: 541 gaacgga 547 ||||||| Sbjct: 19950034 gaacgga 19950040 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 10283252 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 10283193 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283192 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 10283133 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283132 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 10283073 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283072 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 10283013 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 10283012 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 10282953 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282952 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 10282893 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 10282892 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 10282833 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282832 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 10282773 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282772 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 10282713 Query: 541 gaacgga 547 ||||||| Sbjct: 10282712 gaacgga 10282706 Score = 1055 bits (532), Expect = 0.0 Identities = 543/547 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 10393124 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 10393183 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393184 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 10393243 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393244 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 10393303 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393304 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 10393363 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 10393364 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 10393423 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393424 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 10393483 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 10393484 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgg 10393543 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393544 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 10393603 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393604 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 10393663 Query: 541 gaacgga 547 ||||||| Sbjct: 10393664 gaacgga 10393670 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 368 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 414 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 209 ttgtgctgctaggcgaagcggttgagtgc 237 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 119793 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 119734 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119733 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 119674 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119673 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 119614 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119613 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 119554 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 119553 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 119494 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119493 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 119434 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 119433 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 119374 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119373 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 119314 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119313 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 119254 Query: 541 gaacgga 547 ||||||| Sbjct: 119253 gaacgga 119247 Score = 1063 bits (536), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 95246 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 95305 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95306 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 95365 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95366 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 95425 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95426 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 95485 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 95486 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 95545 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95546 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 95605 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 95606 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 95665 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95666 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 95725 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95726 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 95785 Query: 541 gaacgga 547 ||||||| Sbjct: 95786 gaacgga 95792
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1059 bits (534), Expect = 0.0 Identities = 542/545 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 82 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 141 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 201 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 261 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 321 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 322 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 381 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 441 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 442 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 501 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 502 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 561 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 621 Query: 541 gaacg 545 ||||| Sbjct: 622 gaacg 626
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1055 bits (532), Expect = 0.0 Identities = 540/543 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 896 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 837 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 836 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 777 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 776 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 717 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 657 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 656 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 597 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 596 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 537 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 536 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 477 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 476 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 417 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 357 Query: 541 gaa 543 ||| Sbjct: 356 gaa 354
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1055 bits (532), Expect = 0.0 Identities = 543/547 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 140881 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 140940 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140941 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 141000 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141001 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 141060 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141061 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 141120 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 141121 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 141180 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 141181 agcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggctaaatac 141240 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 141241 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 141300 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141301 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 141360 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141361 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 141420 Query: 541 gaacgga 547 ||||||| Sbjct: 141421 gaacgga 141427
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1055 bits (532), Expect = 0.0 Identities = 543/547 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 93477 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 93536 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93537 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 93596 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93597 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 93656 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93657 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 93716 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 93717 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 93776 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93777 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 93836 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 93837 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgg 93896 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93897 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 93956 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93957 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 94016 Query: 541 gaacgga 547 ||||||| Sbjct: 94017 gaacgga 94023
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1055 bits (532), Expect = 0.0 Identities = 540/543 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 44810 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 44751 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44750 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 44691 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44690 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 44631 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44630 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 44571 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 44570 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 44511 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44510 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 44451 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 44450 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 44391 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44390 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 44331 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44330 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 44271 Query: 541 gaa 543 ||| Sbjct: 44270 gaa 44268 Score = 1055 bits (532), Expect = 0.0 Identities = 540/543 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 20308 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 20367 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20368 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 20427 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20428 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 20487 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20488 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 20547 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 20548 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 20607 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20608 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 20667 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 20668 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 20727 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20728 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 20787 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20788 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 20847 Query: 541 gaa 543 ||| Sbjct: 20848 gaa 20850
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1055 bits (532), Expect = 0.0 Identities = 540/543 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1439 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 1380 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1379 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 1320 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1319 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 1260 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1259 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 1200 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1199 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 1140 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1139 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 1080 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1079 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 1020 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1019 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 960 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 959 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 900 Query: 541 gaa 543 ||| Sbjct: 899 gaa 897
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1055 bits (532), Expect = 0.0 Identities = 543/547 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 27541 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 27600 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27601 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 27660 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27661 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 27720 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27721 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 27780 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 27781 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 27840 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27841 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 27900 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 27901 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgg 27960 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27961 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 28020 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28021 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 28080 Query: 541 gaacgga 547 ||||||| Sbjct: 28081 gaacgga 28087
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1055 bits (532), Expect = 0.0 Identities = 540/543 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 123649 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 123590 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123589 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 123530 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123529 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 123470 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123469 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 123410 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 123409 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 123350 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123349 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 123290 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 123289 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 123230 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123229 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 123170 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123169 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 123110 Query: 541 gaa 543 ||| Sbjct: 123109 gaa 123107 Score = 1055 bits (532), Expect = 0.0 Identities = 540/543 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 99188 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 99247 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99248 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 99307 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99308 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 99367 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99368 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 99427 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 99428 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 99487 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99488 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 99547 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 99548 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 99607 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99608 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 99667 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99668 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 99727 Query: 541 gaa 543 ||| Sbjct: 99728 gaa 99730
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1055 bits (532), Expect = 0.0 Identities = 540/543 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 124366 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 124307 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124306 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 124247 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124246 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 124187 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124186 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 124127 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 124126 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 124067 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124066 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 124007 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 124006 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 123947 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123946 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 123887 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123886 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 123827 Query: 541 gaa 543 ||| Sbjct: 123826 gaa 123824 Score = 1055 bits (532), Expect = 0.0 Identities = 540/543 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 99865 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 99924 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99925 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 99984 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99985 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 100044 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100045 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 100104 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 100105 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 100164 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100165 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 100224 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 100225 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 100284 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100285 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 100344 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100345 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 100404 Query: 541 gaa 543 ||| Sbjct: 100405 gaa 100407
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1047 bits (528), Expect = 0.0 Identities = 542/547 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 9242048 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 9241989 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241988 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 9241929 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9241928 aaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaaaccgtgaaa 9241869 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241868 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 9241809 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 9241808 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 9241749 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241748 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 9241689 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 9241688 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 9241629 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241628 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 9241569 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9241568 tctgaccgcgtgcctgttgaagaatgagctggcgactcataggcagtggcttggttaagg 9241509 Query: 541 gaacgga 547 ||||||| Sbjct: 9241508 gaacgga 9241502 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 91 actgaaacatcttagtagccagaggaaaagaaag 124 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1047 bits (528), Expect = 0.0 Identities = 542/547 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 53261 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 53202 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53201 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 53142 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 53141 aaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaaaccgtgaaa 53082 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53081 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 53022 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 53021 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 52962 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52961 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 52902 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 52901 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 52842 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52841 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 52782 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 52781 tctgaccgcgtgcctgttgaagaatgagctggcgactcataggcagtggcttggttaagg 52722 Query: 541 gaacgga 547 ||||||| Sbjct: 52721 gaacgga 52715
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1045 bits (527), Expect = 0.0 Identities = 535/538 (99%) Strand = Plus / Plus Query: 10 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 69 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 70 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 130 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 190 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 250 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 309 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 241 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 300 Query: 310 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 360 Query: 370 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaa 429 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 361 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 420 Query: 430 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 480 Query: 490 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 538
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1041 bits (525), Expect = 0.0 Identities = 539/544 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 42 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 101 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 161 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 162 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 221 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 222 acggggttgtgggagagcagtacaagcgttgtgctgctaggcgaagcggttgagtgccgc 281 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 282 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 341 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 342 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 401 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 402 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 461 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 462 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaattgatc 521 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 522 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 581 Query: 541 gaac 544 |||| Sbjct: 582 gaac 585
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 1029 bits (519), Expect = 0.0 Identities = 530/534 (99%) Strand = Plus / Plus Query: 14 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 73 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 74 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 134 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 194 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240 Query: 254 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 313 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 241 aaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacg 300 Query: 314 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 360 Query: 374 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaataga 433 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 361 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 420 Query: 434 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 480 Query: 494 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 534
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1007 bits (508), Expect = 0.0 Identities = 535/543 (98%), Gaps = 1/543 (0%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 123588 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgccgaa 123529 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123528 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 123469 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123468 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 123409 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123408 acggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 123349 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||||| Sbjct: 123348 accctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagt 123290 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123289 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 123230 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 123229 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 123170 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123169 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 123110 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123109 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 123050 Query: 541 gaa 543 ||| Sbjct: 123049 gaa 123047 Score = 1007 bits (508), Expect = 0.0 Identities = 535/543 (98%), Gaps = 1/543 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 99149 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgccgaa 99208 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99209 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 99268 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99269 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 99328 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99329 acggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 99388 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||||| Sbjct: 99389 accctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagt 99447 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99448 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 99507 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 99508 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 99567 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99568 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 99627 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99628 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 99687 Query: 541 gaa 543 ||| Sbjct: 99688 gaa 99690
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1007 bits (508), Expect = 0.0 Identities = 535/543 (98%), Gaps = 1/543 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 5502 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgccgaa 5561 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5562 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 5621 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5622 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 5681 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5682 acggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 5741 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||||| Sbjct: 5742 accctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagt 5800 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5801 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 5860 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 5861 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 5920 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5921 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 5980 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5981 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 6040 Query: 541 gaa 543 ||| Sbjct: 6041 gaa 6043
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1007 bits (508), Expect = 0.0 Identities = 535/543 (98%), Gaps = 1/543 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 90 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgccgaa 149 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 209 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 210 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 269 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 270 acggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 329 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||||| Sbjct: 330 accctagatggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagt 388 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 448 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 449 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 508 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 568 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 628 Query: 541 gaa 543 ||| Sbjct: 629 gaa 631
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 957 bits (483), Expect = 0.0 Identities = 488/490 (99%) Strand = Plus / Plus Query: 47 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 107 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 167 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 227 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 286 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 287 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 347 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 407 agaacccccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 466 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 420 Query: 467 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 480 Query: 527 tggcttggtt 536 |||||||||| Sbjct: 481 tggcttggtt 490
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 886 bits (447), Expect = 0.0 Identities = 521/544 (95%), Gaps = 4/544 (0%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||| Sbjct: 139499 gaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaa 139441 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139440 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 139381 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139380 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 139321 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| |||||||||||||||||||| |||| | || Sbjct: 139320 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtactgc 139261 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | |||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 139260 accctagatggcgagagtccagtagccgaaagcatcactggcttacgctctgacccgagt 139201 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139200 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 139141 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 139140 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 139081 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 139080 ggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatc 139024 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139023 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 138964 Query: 541 gaac 544 |||| Sbjct: 138963 gaac 138960 Score = 886 bits (447), Expect = 0.0 Identities = 521/544 (95%), Gaps = 4/544 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||| Sbjct: 110446 gaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaa 110504 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110505 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 110564 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110565 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 110624 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| |||||||||||||||||||| |||| | || Sbjct: 110625 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtactgc 110684 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | |||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 110685 accctagatggcgagagtccagtagccgaaagcatcactggcttacgctctgacccgagt 110744 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110745 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 110804 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 110805 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 110864 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 110865 ggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatc 110921 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110922 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 110981 Query: 541 gaac 544 |||| Sbjct: 110982 gaac 110985
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 886 bits (447), Expect = 0.0 Identities = 521/544 (95%), Gaps = 4/544 (0%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||| Sbjct: 134136 gaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaa 134078 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134077 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 134018 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134017 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 133958 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| || Sbjct: 133957 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaatgctgc 133898 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 133897 accctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagt 133838 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133837 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 133778 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 133777 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 133718 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | |||||||||||||||||||| ||| |||||| Sbjct: 133717 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatgtgatc 133661 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133660 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 133601 Query: 541 gaac 544 |||| Sbjct: 133600 gaac 133597 Score = 886 bits (447), Expect = 0.0 Identities = 521/544 (95%), Gaps = 4/544 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||| Sbjct: 103835 gaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaa 103893 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103894 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 103953 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103954 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 104013 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| || Sbjct: 104014 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaatgctgc 104073 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 104074 accctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagt 104133 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104134 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 104193 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 104194 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 104253 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | |||||||||||||||||||| ||| |||||| Sbjct: 104254 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatgtgatc 104310 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104311 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 104370 Query: 541 gaac 544 |||| Sbjct: 104371 gaac 104374
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 884 bits (446), Expect = 0.0 Identities = 520/543 (95%), Gaps = 4/543 (0%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||| Sbjct: 127777 gaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaa 127719 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127718 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 127659 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 127658 aaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 127599 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| || Sbjct: 127598 acggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggagtgctgc 127539 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | |||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 127538 accctagatggcgagagtccagtagccgaaaacatcactagcttacgctctgacccgagt 127479 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127478 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 127419 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 127418 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 127359 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| |||||||||||||||||||||| ||| |||||| Sbjct: 127358 ggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatgtgatc 127302 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127301 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 127242 Query: 541 gaa 543 ||| Sbjct: 127241 gaa 127239 Score = 884 bits (446), Expect = 0.0 Identities = 520/543 (95%), Gaps = 4/543 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||| Sbjct: 107145 gaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaa 107203 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107204 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 107263 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 107264 aaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 107323 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| || Sbjct: 107324 acggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggagtgctgc 107383 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | |||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 107384 accctagatggcgagagtccagtagccgaaaacatcactagcttacgctctgacccgagt 107443 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107444 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 107503 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 107504 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 107563 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| |||||||||||||||||||||| ||| |||||| Sbjct: 107564 ggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatgtgatc 107620 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107621 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 107680 Query: 541 gaa 543 ||| Sbjct: 107681 gaa 107683
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 870 bits (439), Expect = 0.0 Identities = 519/544 (95%), Gaps = 4/544 (0%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||| ||||||||||| |||||| ||||||| Sbjct: 142021 gaaaataagcatagatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaa 141963 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141962 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 141903 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141902 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 141843 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | || Sbjct: 141842 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgagtactgc 141783 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | ||||||||| |||||||||||||| ||||| |||||||||||||| Sbjct: 141782 accctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctgacccgagt 141723 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 141722 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatac 141663 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 141662 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 141603 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 141602 ggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatc 141546 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141545 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 141486 Query: 541 gaac 544 |||| Sbjct: 141485 gaac 141482 Score = 870 bits (439), Expect = 0.0 Identities = 519/544 (95%), Gaps = 4/544 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||| ||||||||||| |||||| ||||||| Sbjct: 111636 gaaaataagcatagatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaa 111694 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111695 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 111754 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111755 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 111814 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | || Sbjct: 111815 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgagtactgc 111874 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | ||||||||| |||||||||||||| ||||| |||||||||||||| Sbjct: 111875 accctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctgacccgagt 111934 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 111935 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatac 111994 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 111995 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 112054 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 112055 ggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatc 112111 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112112 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 112171 Query: 541 gaac 544 |||| Sbjct: 112172 gaac 112175
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 868 bits (438), Expect = 0.0 Identities = 519/544 (95%), Gaps = 8/544 (1%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||| Sbjct: 134894 gaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaa 134836 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134835 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 134776 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134775 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 134716 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||||| || |||||| || Sbjct: 134715 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgc 134656 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||| Sbjct: 134655 accctagatggctagagtccagtagccgaaagcatcactagcttacgttctaacccgagt 134596 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134595 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 134536 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134535 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 134476 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||| Sbjct: 134475 ggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaa----atc 134423 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134422 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 134363 Query: 541 gaac 544 |||| Sbjct: 134362 gaac 134359 Score = 868 bits (438), Expect = 0.0 Identities = 519/544 (95%), Gaps = 8/544 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||| Sbjct: 105388 gaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaa 105446 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105447 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 105506 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105507 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 105566 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||||| || |||||| || Sbjct: 105567 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgc 105626 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||| Sbjct: 105627 accctagatggctagagtccagtagccgaaagcatcactagcttacgttctaacccgagt 105686 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105687 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 105746 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 105747 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 105806 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||| Sbjct: 105807 ggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaa----atc 105859 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105860 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 105919 Query: 541 gaac 544 |||| Sbjct: 105920 gaac 105923
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 864 bits (436), Expect = 0.0 Identities = 519/544 (95%), Gaps = 6/544 (1%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 136504 gaaaataagcatagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaa 136446 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136445 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 136386 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136385 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 136326 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || Sbjct: 136325 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgc 136266 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 136265 accctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagt 136206 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136205 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 136146 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 136145 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 136086 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | |||||||||||||||||||| | || | | Sbjct: 136085 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--c 136031 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136030 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 135971 Query: 541 gaac 544 |||| Sbjct: 135970 gaac 135967 Score = 864 bits (436), Expect = 0.0 Identities = 519/544 (95%), Gaps = 6/544 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 105921 gaaaataagcatagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaa 105979 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105980 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 106039 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106040 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 106099 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || Sbjct: 106100 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgc 106159 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 106160 accctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagt 106219 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106220 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 106279 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 106280 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 106339 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | |||||||||||||||||||| | || | | Sbjct: 106340 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--c 106394 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106395 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 106454 Query: 541 gaac 544 |||| Sbjct: 106455 gaac 106458
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 846 bits (427), Expect = 0.0 Identities = 517/544 (95%), Gaps = 5/544 (0%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||| Sbjct: 132688 gaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaa 132630 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132629 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 132570 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132569 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 132510 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| || Sbjct: 132509 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgc 132450 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132449 accctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 132390 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132389 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 132330 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 132329 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 132270 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | | Sbjct: 132269 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggc 132214 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132213 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 132154 Query: 541 gaac 544 |||| Sbjct: 132153 gaac 132150 Score = 846 bits (427), Expect = 0.0 Identities = 517/544 (95%), Gaps = 5/544 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||| Sbjct: 104190 gaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaa 104248 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104249 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 104308 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104309 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 104368 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| || Sbjct: 104369 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgc 104428 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104429 accctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 104488 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104489 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 104548 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 104549 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 104608 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | | Sbjct: 104609 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggc 104664 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104665 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 104724 Query: 541 gaac 544 |||| Sbjct: 104725 gaac 104728
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 846 bits (427), Expect = 0.0 Identities = 517/544 (95%), Gaps = 5/544 (0%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| ||||||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 132911 gaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaa 132853 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132852 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 132793 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132792 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 132733 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||| Sbjct: 132732 acggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggagtgccgc 132673 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132672 accctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagt 132613 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132612 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 132553 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 132552 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 132493 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 132492 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggc 132437 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132436 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 132377 Query: 541 gaac 544 |||| Sbjct: 132376 gaac 132373 Score = 846 bits (427), Expect = 0.0 Identities = 517/544 (95%), Gaps = 5/544 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| ||||||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 103853 gaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaa 103911 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103912 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 103971 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103972 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 104031 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||| Sbjct: 104032 acggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggagtgccgc 104091 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104092 accctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagt 104151 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104152 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 104211 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 104212 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 104271 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 104272 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggc 104327 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104328 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 104387 Query: 541 gaac 544 |||| Sbjct: 104388 gaac 104391
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 846 bits (427), Expect = 0.0 Identities = 517/544 (95%), Gaps = 5/544 (0%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||| Sbjct: 132681 gaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaa 132623 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132622 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 132563 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132562 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 132503 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| || Sbjct: 132502 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgc 132443 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132442 accctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 132383 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132382 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 132323 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 132322 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 132263 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | | Sbjct: 132262 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggc 132207 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132206 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 132147 Query: 541 gaac 544 |||| Sbjct: 132146 gaac 132143 Score = 846 bits (427), Expect = 0.0 Identities = 517/544 (95%), Gaps = 5/544 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||| Sbjct: 104188 gaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaa 104246 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104247 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 104306 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104307 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 104366 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| || Sbjct: 104367 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgc 104426 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104427 accctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 104486 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104487 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 104546 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 104547 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 104606 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | | Sbjct: 104607 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggc 104662 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104663 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 104722 Query: 541 gaac 544 |||| Sbjct: 104723 gaac 104726
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 839 bits (423), Expect = 0.0 Identities = 516/544 (94%), Gaps = 5/544 (0%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||| Sbjct: 131580 gaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaa 131522 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131521 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 131462 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131461 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 131402 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| || Sbjct: 131401 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgc 131342 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 131341 accctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 131282 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131281 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 131222 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 131221 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 131162 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | | Sbjct: 131161 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggc 131106 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131105 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 131046 Query: 541 gaac 544 |||| Sbjct: 131045 gaac 131042 Score = 839 bits (423), Expect = 0.0 Identities = 516/544 (94%), Gaps = 5/544 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||| Sbjct: 103055 gaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tgctgaa 103113 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103114 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 103173 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103174 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 103233 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| || Sbjct: 103234 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgc 103293 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 103294 accctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 103353 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103354 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 103413 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 103414 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 103473 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | | Sbjct: 103474 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggc 103529 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103530 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 103589 Query: 541 gaac 544 |||| Sbjct: 103590 gaac 103593
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 839 bits (423), Expect = 0.0 Identities = 516/544 (94%), Gaps = 5/544 (0%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| ||||||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 133872 gaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaa 133814 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133813 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 133754 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133753 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 133694 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||| | |||||| |||||||||||||||||||| ||||||||| Sbjct: 133693 acggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgc 133634 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133633 accctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagt 133574 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133573 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 133514 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 133513 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 133454 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 133453 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggc 133398 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133397 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 133338 Query: 541 gaac 544 |||| Sbjct: 133337 gaac 133334 Score = 839 bits (423), Expect = 0.0 Identities = 516/544 (94%), Gaps = 5/544 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| ||||||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 104777 gaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaa 104835 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104836 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 104895 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104896 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 104955 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||| | |||||| |||||||||||||||||||| ||||||||| Sbjct: 104956 acggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgc 105015 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105016 accctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagt 105075 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105076 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 105135 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 105136 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 105195 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 105196 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggc 105251 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105252 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 105311 Query: 541 gaac 544 |||| Sbjct: 105312 gaac 105315
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 835 bits (421), Expect = 0.0 Identities = 426/428 (99%) Strand = Plus / Plus Query: 120 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 180 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 420 Query: 540 ggaacgga 547 |||||||| Sbjct: 421 ggaacgga 428
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 833 bits (420), Expect = 0.0 Identities = 428/431 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 86 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 145 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 205 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 206 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 265 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 266 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 325 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 326 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 385 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 445 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 446 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 505 Query: 421 gtagtgaaata 431 ||||||||||| Sbjct: 506 gtagtgaaata 516
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 831 bits (419), Expect = 0.0 Identities = 515/544 (94%), Gaps = 5/544 (0%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||| Sbjct: 140273 gaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaa 140215 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140214 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 140155 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140154 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 140095 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||||||| || ||| || Sbjct: 140094 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaatgctgc 140035 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 140034 accctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagt 139975 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139974 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 139915 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 139914 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 139855 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | || ||||||||||||||||| | | | | | Sbjct: 139854 ggagtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag-acgggggc 139799 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139798 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 139739 Query: 541 gaac 544 |||| Sbjct: 139738 gaac 139735 Score = 831 bits (419), Expect = 0.0 Identities = 515/544 (94%), Gaps = 5/544 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||| Sbjct: 109787 gaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaa 109845 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109846 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 109905 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109906 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 109965 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||||||| || ||| || Sbjct: 109966 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaatgctgc 110025 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 110026 accctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagt 110085 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110086 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 110145 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 110146 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 110205 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | || ||||||||||||||||| | | | | | Sbjct: 110206 ggagtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag-acgggggc 110261 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110262 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 110321 Query: 541 gaac 544 |||| Sbjct: 110322 gaac 110325
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 831 bits (419), Expect = 0.0 Identities = 515/544 (94%), Gaps = 5/544 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| ||||||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 86 gaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tgctgaa 144 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 204 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 264 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||| | |||||| |||||||||||||||||||| ||||||||| Sbjct: 265 acggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgc 324 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 325 accctagatggcgagagtccagtagccgagagcatcactagcttatgctctgacccgagt 384 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 444 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 445 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 504 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 505 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggc 560 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 620 Query: 541 gaac 544 |||| Sbjct: 621 gaac 624
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 831 bits (419), Expect = 0.0 Identities = 515/544 (94%), Gaps = 5/544 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 95 gaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaa 153 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 154 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaag 213 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 273 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||||| || |||||| || Sbjct: 274 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgc 333 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 334 accctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagt 393 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 453 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 454 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 513 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | | Sbjct: 514 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggc 569 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 629 Query: 541 gaac 544 |||| Sbjct: 630 gaac 633
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 831 bits (419), Expect = 0.0 Identities = 424/426 (99%) Strand = Plus / Plus Query: 122 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 182 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 242 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 301 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 302 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 362 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantggg 421 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 422 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 482 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 420 Query: 542 aacgga 547 |||||| Sbjct: 421 aacgga 426
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 831 bits (419), Expect = 0.0 Identities = 424/426 (99%) Strand = Plus / Plus Query: 122 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 182 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 242 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 301 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 302 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 362 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantggg 421 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 422 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 482 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 420 Query: 542 aacgga 547 |||||| Sbjct: 421 aacgga 426
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 829 bits (418), Expect = 0.0 Identities = 423/425 (99%) Strand = Plus / Plus Query: 123 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 183 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 243 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 302 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 303 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 363 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggt 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 423 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 483 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 Query: 543 acgga 547 ||||| Sbjct: 421 acgga 425
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 829 bits (418), Expect = 0.0 Identities = 423/425 (99%) Strand = Plus / Plus Query: 123 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 183 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 243 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 302 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 303 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 363 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggt 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 423 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 483 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 423 Query: 543 acgga 547 ||||| Sbjct: 424 acgga 428
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 827 bits (417), Expect = 0.0 Identities = 516/545 (94%), Gaps = 7/545 (1%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||| Sbjct: 136213 gaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaa 136155 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136154 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 136095 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136094 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 136035 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccg 239 ||||||||||||||||||||||||||||| ||||||||||||||||| | || ||| | Sbjct: 136034 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctg 135975 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135974 caccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 135915 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135914 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 135855 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 135854 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 135795 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 135794 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg-- 135740 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135739 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135680 Query: 540 ggaac 544 ||||| Sbjct: 135679 ggaac 135675 Score = 827 bits (417), Expect = 0.0 Identities = 516/545 (94%), Gaps = 7/545 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||| Sbjct: 106417 gaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaa 106475 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106476 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 106535 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106536 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 106595 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccg 239 ||||||||||||||||||||||||||||| ||||||||||||||||| | || ||| | Sbjct: 106596 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctg 106655 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106656 caccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 106715 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106716 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 106775 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 106776 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 106835 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 106836 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg-- 106890 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106891 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106950 Query: 540 ggaac 544 ||||| Sbjct: 106951 ggaac 106955
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 827 bits (417), Expect = 0.0 Identities = 516/545 (94%), Gaps = 7/545 (1%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||| Sbjct: 136851 gaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaa 136793 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136792 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 136733 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136732 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 136673 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccg 239 ||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| | Sbjct: 136672 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctg 136613 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 136612 caccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 136553 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136552 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 136493 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 136492 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 136433 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 136432 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg-- 136378 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136377 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 136318 Query: 540 ggaac 544 ||||| Sbjct: 136317 ggaac 136313 Score = 827 bits (417), Expect = 0.0 Identities = 516/545 (94%), Gaps = 7/545 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||| Sbjct: 106706 gaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaa 106764 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106765 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 106824 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106825 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 106884 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccg 239 ||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| | Sbjct: 106885 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctg 106944 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106945 caccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 107004 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107005 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 107064 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 107065 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 107124 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 107125 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg-- 107179 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107180 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 107239 Query: 540 ggaac 544 ||||| Sbjct: 107240 ggaac 107244
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 827 bits (417), Expect = 0.0 Identities = 516/545 (94%), Gaps = 7/545 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||| Sbjct: 1611 gaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaa 1669 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1670 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 1729 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1730 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 1789 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccg 239 ||||||||||||||||||||||||||||| ||||||||||||||||| | || ||| | Sbjct: 1790 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctg 1849 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1850 caccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 1909 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1910 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 1969 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 1970 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 2029 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 2030 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg-- 2084 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2085 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 2144 Query: 540 ggaac 544 ||||| Sbjct: 2145 ggaac 2149
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 827 bits (417), Expect = 0.0 Identities = 516/545 (94%), Gaps = 7/545 (1%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||| Sbjct: 135459 gaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaa 135401 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135400 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 135341 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135340 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 135281 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccg 239 ||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| | Sbjct: 135280 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctg 135221 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135220 caccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 135161 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135160 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 135101 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 135100 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 135041 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 135040 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg-- 134986 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134985 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 134926 Query: 540 ggaac 544 ||||| Sbjct: 134925 ggaac 134921 Score = 827 bits (417), Expect = 0.0 Identities = 516/545 (94%), Gaps = 7/545 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||| Sbjct: 105577 gaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaa 105635 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105636 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 105695 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105696 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 105755 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccg 239 ||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| | Sbjct: 105756 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctg 105815 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105816 caccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 105875 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105876 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 105935 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 105936 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 105995 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 105996 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg-- 106050 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106051 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106110 Query: 540 ggaac 544 ||||| Sbjct: 106111 ggaac 106115
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 827 bits (417), Expect = 0.0 Identities = 516/545 (94%), Gaps = 7/545 (1%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||| Sbjct: 135594 gaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaa 135536 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135535 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 135476 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135475 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 135416 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccg 239 ||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| | Sbjct: 135415 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctg 135356 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135355 caccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 135296 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135295 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 135236 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 135235 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 135176 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 135175 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg-- 135121 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135120 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135061 Query: 540 ggaac 544 ||||| Sbjct: 135060 ggaac 135056 Score = 827 bits (417), Expect = 0.0 Identities = 516/545 (94%), Gaps = 7/545 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||| Sbjct: 105749 gaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaa 105807 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105808 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 105867 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105868 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 105927 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccg 239 ||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| | Sbjct: 105928 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctg 105987 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105988 caccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 106047 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106048 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 106107 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 106108 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 106167 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 106168 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg-- 106222 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106223 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106282 Query: 540 ggaac 544 ||||| Sbjct: 106283 ggaac 106287
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 827 bits (417), Expect = 0.0 Identities = 516/545 (94%), Gaps = 7/545 (1%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||| Sbjct: 135592 gaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaa 135534 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135533 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 135474 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135473 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 135414 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccg 239 ||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| | Sbjct: 135413 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctg 135354 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135353 caccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 135294 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135293 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 135234 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 135233 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 135174 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 135173 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg-- 135119 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135118 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135059 Query: 540 ggaac 544 ||||| Sbjct: 135058 ggaac 135054 Score = 827 bits (417), Expect = 0.0 Identities = 516/545 (94%), Gaps = 7/545 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||| Sbjct: 105746 gaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaa 105804 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105805 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 105864 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105865 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 105924 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccg 239 ||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| | Sbjct: 105925 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctg 105984 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105985 caccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 106044 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106045 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 106104 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 106105 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 106164 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 106165 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg-- 106219 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106220 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106279 Query: 540 ggaac 544 ||||| Sbjct: 106280 ggaac 106284
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 827 bits (417), Expect = 0.0 Identities = 516/545 (94%), Gaps = 7/545 (1%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||| Sbjct: 135504 gaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaa 135446 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135445 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 135386 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135385 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 135326 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccg 239 ||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| | Sbjct: 135325 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctg 135266 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135265 caccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 135206 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135205 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 135146 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 135145 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 135086 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 135085 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg-- 135031 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135030 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 134971 Query: 540 ggaac 544 ||||| Sbjct: 134970 ggaac 134966 Score = 827 bits (417), Expect = 0.0 Identities = 516/545 (94%), Gaps = 7/545 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||| Sbjct: 105624 gaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaa 105682 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105683 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 105742 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105743 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 105802 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccg 239 ||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| | Sbjct: 105803 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctg 105862 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105863 caccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 105922 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105923 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 105982 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 105983 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 106042 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 106043 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg-- 106097 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106098 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106157 Query: 540 ggaac 544 ||||| Sbjct: 106158 ggaac 106162
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 827 bits (417), Expect = 0.0 Identities = 516/545 (94%), Gaps = 7/545 (1%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||| Sbjct: 136211 gaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaa 136153 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136152 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 136093 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136092 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 136033 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccg 239 ||||||||||||||||||||||||||||| ||||||||||||||||| | || ||| | Sbjct: 136032 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctg 135973 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135972 caccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 135913 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135912 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 135853 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 135852 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 135793 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 135792 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg-- 135738 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135737 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135678 Query: 540 ggaac 544 ||||| Sbjct: 135677 ggaac 135673 Score = 827 bits (417), Expect = 0.0 Identities = 516/545 (94%), Gaps = 7/545 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||| Sbjct: 106415 gaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaa 106473 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106474 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 106533 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106534 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 106593 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccg 239 ||||||||||||||||||||||||||||| ||||||||||||||||| | || ||| | Sbjct: 106594 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctg 106653 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106654 caccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 106713 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106714 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 106773 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 106774 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 106833 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 106834 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg-- 106888 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106889 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106948 Query: 540 ggaac 544 ||||| Sbjct: 106949 ggaac 106953
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 825 bits (416), Expect = 0.0 Identities = 421/423 (99%) Strand = Plus / Plus Query: 125 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 185 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 245 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 304 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 305 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 365 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtag 424 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 425 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 485 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 420 Query: 545 gga 547 ||| Sbjct: 421 gga 423
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 823 bits (415), Expect = 0.0 Identities = 423/426 (99%) Strand = Plus / Plus Query: 2 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 61 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 62 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 122 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 182 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 242 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 301 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 300 Query: 302 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 360 Query: 362 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantggg 421 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 361 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 420 Query: 422 tagtga 427 |||||| Sbjct: 421 tagtga 426
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 819 bits (413), Expect = 0.0 Identities = 512/542 (94%), Gaps = 5/542 (0%) Strand = Plus / Plus Query: 3 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 62 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 106094 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 106152 Query: 63 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 122 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106153 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 106212 Query: 123 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106213 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 106272 Query: 183 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 242 ||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |||| Sbjct: 106273 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcac 106332 Query: 243 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 302 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 106333 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 106392 Query: 303 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106393 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 106452 Query: 363 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggt 422 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106453 ctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 106512 Query: 423 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 482 ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | ||| Sbjct: 106513 agtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggactc 106568 Query: 483 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106569 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 106628 Query: 543 ac 544 || Sbjct: 106629 ac 106630 Score = 769 bits (388), Expect = 0.0 Identities = 511/545 (93%), Gaps = 8/545 (1%) Strand = Plus / Minus Query: 3 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 62 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 135815 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 135757 Query: 63 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 122 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135756 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 135697 Query: 123 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135696 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135637 Query: 183 ggggttgtgggagagc-aatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 241 |||||||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||| Sbjct: 135636 ggggttgtgggagagcaaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgca 135577 Query: 242 ccctagatggctaaagtccagtagccgaaagcatcactagcttatg-ctctgacccgagt 300 ||||||||||| | |||||||||||||||||||||||||||||| | | ||||||||||| Sbjct: 135576 ccctagatggcgagagtccagtagccgaaagcatcactagcttacgcccctgacccgagt 135517 Query: 301 agcatggggcacgtggaatcccgtgtgaatcag-caaggaccaccttgcaaggctaaata 359 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 135516 agcatggggcacgtggaatcccgtgtgaatcagccaaggaccaccttgcaaggctaaata 135457 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 135456 ctcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 135397 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | Sbjct: 135396 gggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgagga 135341 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135340 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135281 Query: 540 ggaac 544 ||||| Sbjct: 135280 ggaac 135276
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 819 bits (413), Expect = 0.0 Identities = 512/542 (94%), Gaps = 5/542 (0%) Strand = Plus / Minus Query: 3 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 62 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 136091 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 136033 Query: 63 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 122 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136032 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 135973 Query: 123 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135972 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 135913 Query: 183 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 242 ||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |||| Sbjct: 135912 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcac 135853 Query: 243 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 302 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 135852 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 135793 Query: 303 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135792 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 135733 Query: 363 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggt 422 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 135732 ctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 135673 Query: 423 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 482 ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | ||| Sbjct: 135672 agtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggactc 135617 Query: 483 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135616 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 135557 Query: 543 ac 544 || Sbjct: 135556 ac 135555 Score = 819 bits (413), Expect = 0.0 Identities = 512/542 (94%), Gaps = 5/542 (0%) Strand = Plus / Plus Query: 3 aaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 62 |||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 106316 aaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatc 106374 Query: 63 catgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 122 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106375 catgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaa 106434 Query: 123 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106435 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 106494 Query: 183 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 242 ||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |||| Sbjct: 106495 ggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcac 106554 Query: 243 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 302 |||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 106555 cctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 106614 Query: 303 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106615 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 106674 Query: 363 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggt 422 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 106675 ctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgggg 106734 Query: 423 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 482 ||||||||||||| |||||||| | |||| ||||||||||||||| | | | | ||| Sbjct: 106735 agtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggactc 106790 Query: 483 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106791 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 106850 Query: 543 ac 544 || Sbjct: 106851 ac 106852
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 819 bits (413), Expect = 0.0 Identities = 515/545 (94%), Gaps = 7/545 (1%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||| ||||||| |||||| |||||||| |||||| ||||||| Sbjct: 135942 gaaaataagcatagatccggggattcccgaatagggcaacctttcgaactgc-tgctgaa 135884 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135883 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 135824 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135823 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 135764 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccg 239 ||||||||||||||||||||||||||||| ||||||||||||||||| | || ||| | Sbjct: 135763 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctg 135704 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135703 caccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 135644 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135643 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 135584 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 135583 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 135524 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 135523 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg-- 135469 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135468 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135409 Query: 540 ggaac 544 ||||| Sbjct: 135408 ggaac 135404 Score = 819 bits (413), Expect = 0.0 Identities = 515/545 (94%), Gaps = 7/545 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||| ||||||| |||||| |||||||| |||||| ||||||| Sbjct: 106196 gaaaataagcatagatccggggattcccgaatagggcaacctttcgaactgc-tgctgaa 106254 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106255 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 106314 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106315 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 106374 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccg 239 ||||||||||||||||||||||||||||| ||||||||||||||||| | || ||| | Sbjct: 106375 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctg 106434 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106435 caccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 106494 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106495 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 106554 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 106555 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 106614 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 106615 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg-- 106669 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106670 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106729 Query: 540 ggaac 544 ||||| Sbjct: 106730 ggaac 106734
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 819 bits (413), Expect = 0.0 Identities = 515/545 (94%), Gaps = 7/545 (1%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||| Sbjct: 135471 gaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaa 135413 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135412 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 135353 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135352 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 135293 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccg 239 ||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| | Sbjct: 135292 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctg 135233 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135232 caccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 135173 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135172 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 135113 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 135112 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 135053 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 135052 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg-- 134998 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134997 ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaag 134938 Query: 540 ggaac 544 ||||| Sbjct: 134937 ggaac 134933 Score = 819 bits (413), Expect = 0.0 Identities = 515/545 (94%), Gaps = 7/545 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||| Sbjct: 105591 gaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaa 105649 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105650 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 105709 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105710 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 105769 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccg 239 ||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| | Sbjct: 105770 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctg 105829 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105830 caccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 105889 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105890 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 105949 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 105950 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 106009 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 106010 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg-- 106064 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106065 ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaag 106124 Query: 540 ggaac 544 ||||| Sbjct: 106125 ggaac 106129
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 815 bits (411), Expect = 0.0 Identities = 513/544 (94%), Gaps = 5/544 (0%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||| |||||||||||||||| ||||||||||||||| |||| | ||||||| Sbjct: 131704 gaaaataagcagagatccggagattcccgaataggtcaacctttcgaacttc-tgctgaa 131646 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131645 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 131586 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131585 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 131526 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||| | || |||||| | Sbjct: 131525 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggagtgcgga 131466 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131465 accctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 131406 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131405 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 131346 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 131345 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 131286 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | ||||| |||||||||||||||| | || | Sbjct: 131285 ggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggagggggaccaga-c 131230 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131229 cctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 131170 Query: 541 gaac 544 |||| Sbjct: 131169 gaac 131166 Score = 815 bits (411), Expect = 0.0 Identities = 513/544 (94%), Gaps = 5/544 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||| |||||||||||||||| ||||||||||||||| |||| | ||||||| Sbjct: 101741 gaaaataagcagagatccggagattcccgaataggtcaacctttcgaacttc-tgctgaa 101799 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101800 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 101859 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101860 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 101919 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||| | || |||||| | Sbjct: 101920 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggagtgcgga 101979 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101980 accctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 102039 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102040 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 102099 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 102100 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 102159 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | ||||| |||||||||||||||| | || | Sbjct: 102160 ggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggagggggaccaga-c 102215 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102216 cctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 102275 Query: 541 gaac 544 |||| Sbjct: 102276 gaac 102279
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 809 bits (408), Expect = 0.0 Identities = 514/545 (94%), Gaps = 6/545 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 87 gaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaa 145 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 146 tccatgggcaggcaagagacaacctaacgaactgaaacatcttagtagccagaggaaaag 205 Query: 121 aaagcaaaagcgattcccgtagtagc-ggcgagcgaaatgggagcagcctaaaccgtgaa 179 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 206 aaagcaaaagcgattcccgtagtagcaggcgagcgaaatgggagcagcctaaaccgtgaa 265 Query: 180 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 239 |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 266 aacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgaagtgccg 325 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 326 aaccctagatggctagagtccagtagccgaaagcatcactagcttacgctctgacccgag 385 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 445 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 446 ctcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccaccg 505 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 506 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcctg-ggg 561 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 621 Query: 540 ggaac 544 ||||| Sbjct: 622 ggaac 626
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 803 bits (405), Expect = 0.0 Identities = 514/545 (94%), Gaps = 8/545 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||| Sbjct: 62 gaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaa 120 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 180 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 240 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccg 239 ||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| | Sbjct: 241 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctg 300 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||| | ||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 301 caccc-atatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 359 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 419 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 420 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 479 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 480 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg-- 534 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 594 Query: 540 ggaac 544 ||||| Sbjct: 595 ggaac 599
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 795 bits (401), Expect = 0.0 Identities = 512/545 (93%), Gaps = 7/545 (1%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| ||||||||||||||||| ||||||||||||||| |||||| ||||||| Sbjct: 139417 gaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaa 139359 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 139358 tccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggaggaaaag 139299 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139298 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 139239 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| Sbjct: 139238 acggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccga 139179 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 139178 accctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagt 139119 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139118 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 139059 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 139058 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcgg 138999 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgat 479 | ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 138998 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccaggg-- 138944 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138943 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 138884 Query: 540 ggaac 544 ||||| Sbjct: 138883 ggaac 138879 Score = 795 bits (401), Expect = 0.0 Identities = 512/545 (93%), Gaps = 7/545 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| ||||||||||||||||| ||||||||||||||| |||||| ||||||| Sbjct: 109680 gaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaa 109738 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 109739 tccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggaggaaaag 109798 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109799 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 109858 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| Sbjct: 109859 acggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccga 109918 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 109919 accctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagt 109978 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109979 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 110038 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 110039 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcgg 110098 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgat 479 | ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 110099 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccaggg-- 110153 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110154 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110213 Query: 540 ggaac 544 ||||| Sbjct: 110214 ggaac 110218
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 793 bits (400), Expect = 0.0 Identities = 507/541 (93%), Gaps = 4/541 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||| ||| |||||||| |||||| ||||||| Sbjct: 88 gaaaataagcatagatccggagattcccgaatgggttaaccttttgaactgc-tgctgaa 146 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 ttcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 206 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 207 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaa 266 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| |||| Sbjct: 267 acggggttgtgggagagcaatataagtgttgtgttgctaggcgaagcggttgagtcccgc 326 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||| |||||| | |||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 327 accccagatggtgagagtccagtagccgaaagcatcactagcttacgctctaacccgagt 386 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 446 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 447 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 506 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | |||||||||||||||||||| ||| |||| Sbjct: 507 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcggatc 563 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 564 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaagg 623 Query: 541 g 541 | Sbjct: 624 g 624
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 791 bits (399), Expect = 0.0 Identities = 513/547 (93%), Gaps = 7/547 (1%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| ||||||||||||||||| ||||||||||||||| |||||| ||||||| Sbjct: 139626 gaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaa 139568 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139567 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 139508 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139507 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 139448 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccg 239 ||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| | Sbjct: 139447 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcgaatgctg 139388 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 |||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 139387 caccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgag 139328 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139327 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 139268 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 139267 ctcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 139208 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga--aagtg 477 || ||||||||||||| |||||||| | |||||||||||||||||||| || | | Sbjct: 139207 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagactactag 139151 Query: 478 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139150 gactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 139091 Query: 538 agggaac 544 ||||||| Sbjct: 139090 agggaac 139084 Score = 791 bits (399), Expect = 0.0 Identities = 513/547 (93%), Gaps = 7/547 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| ||||||||||||||||| ||||||||||||||| |||||| ||||||| Sbjct: 109673 gaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaa 109731 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109732 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 109791 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109792 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 109851 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccg 239 ||||||||||||||||||||||||||||| ||||||||||||||||| || || ||| | Sbjct: 109852 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcgaatgctg 109911 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 |||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 109912 caccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgag 109971 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109972 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 110031 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 110032 ctcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 110091 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga--aagtg 477 || ||||||||||||| |||||||| | |||||||||||||||||||| || | | Sbjct: 110092 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagactactag 110148 Query: 478 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110149 gactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 110208 Query: 538 agggaac 544 ||||||| Sbjct: 110209 agggaac 110215
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 783 bits (395), Expect = 0.0 Identities = 514/547 (93%), Gaps = 9/547 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||| Sbjct: 1853 gaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaa 1911 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1912 tccatgggcaggcaagagacaacctggcgaactgaaccatcttagtagccagaggaaaag 1971 Query: 121 aaagcaaaag-cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 179 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1972 aaagcaaaaggcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 2031 Query: 180 aacggggttgtgggagagcaatacaagcgtt-gtgctgctaggcgaagcggtt-gagtgc 237 ||||||||||||||||||||||||||||| ||||||||||||||||| | || ||| Sbjct: 2032 aacggggttgtgggagagcaatacaagcggccgtgctgctaggcgaagcagcccgaatgc 2091 Query: 238 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 297 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2092 tgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccg 2151 Query: 298 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2152 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 2211 Query: 358 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccan 417 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 2271 Query: 418 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 477 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 2272 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 2328 Query: 478 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2329 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 2386 Query: 538 agggaac 544 ||||||| Sbjct: 2387 agggaac 2393
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 773 bits (390), Expect = 0.0 Identities = 509/546 (93%), Gaps = 6/546 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||| ||||||||||||||||||||| ||||||| |||| ||| |||||| ||||||| Sbjct: 86349 gaaaatgagcatagatccggagattcccgaataggttaacccttttaactgc-tgctgaa 86407 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 86408 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaatag 86467 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 86468 aaagcaaaagcgattcccgtagtagtggcgagcgaaatgggagcagcctaaaccgtgaaa 86527 Query: 181 acggggttgtgggagagc--aatacaagcgttgtgctgctaggcgaagcggttgagtgcc 238 |||||||||||||||||| |||| |||| |||||||||||||||||||||||||| | Sbjct: 86528 acggggttgtgggagagcccaatataagctctgtgctgctaggcgaagcggttgagtcct 86587 Query: 239 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 298 ||||||||||||| | |||||||||||||||||||||| | ||||| ||||| |||||| Sbjct: 86588 gcaccctagatggtgagagtccagtagccgaaagcatcattggcttacgctctaacccga 86647 Query: 299 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86648 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 86707 Query: 359 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccant 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86708 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 86767 Query: 419 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 478 ||| ||||||||||||| |||||||| | |||||||||||||||||||| || || Sbjct: 86768 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaaaattaga 86824 Query: 479 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 538 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 86825 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaa 86884 Query: 539 gggaac 544 |||||| Sbjct: 86885 gggaac 86890
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 773 bits (390), Expect = 0.0 Identities = 509/545 (93%), Gaps = 8/545 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| |||||||||||||||| |||||| |||||||| |||| | ||||||| Sbjct: 583 gaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-tgctgaa 641 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 701 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 702 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 761 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||| | || |||||| | Sbjct: 762 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggt 821 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 822 accctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 881 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 882 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 941 Query: 361 tcctgggtgaccgatagcgaagtagta-ccgtgagggaaaggtgaaaagaacccccantg 419 |||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| | Sbjct: 942 tcctgggtgaccgatagccaaatagtacccgtgagggaaaggtgaaaagaacccccatcg 1001 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | ||||| |||||||||||||| || || Sbjct: 1002 gggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggagacag---g 1055 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1056 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 1115 Query: 540 ggaac 544 ||||| Sbjct: 1116 ggaac 1120
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 773 bits (390), Expect = 0.0 Identities = 509/546 (93%), Gaps = 6/546 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||| ||||||||||||||||||||| ||||||| |||||||| ||||| ||||||| Sbjct: 88435 gaaaattagcatagatccggagattcccgaataggttaacctttttcactgc-tgctgaa 88493 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 88494 tccatgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagaggaatag 88553 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88554 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 88613 Query: 181 acggggttgtgggagagca--atacaagcgttgtgctgctaggcgaagcggttgagtgcc 238 ||||||||||||||||||| ||| |||| |||||||||||||||||||||||||| | Sbjct: 88614 acggggttgtgggagagcacaatataagctctgtgctgctaggcgaagcggttgagtcct 88673 Query: 239 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 298 ||||||||||||| | |||||||||||||||||||||| | ||||| ||||| |||||| Sbjct: 88674 gcaccctagatggtgagagtccagtagccgaaagcatcattggcttacgctctaacccga 88733 Query: 299 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88734 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 88793 Query: 359 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccant 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88794 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatc 88853 Query: 419 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 478 ||| ||||||||||||| |||||||| | |||||||||||||||||||| || || Sbjct: 88854 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaaaattaga 88910 Query: 479 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 538 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 88911 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaa 88970 Query: 539 gggaac 544 |||||| Sbjct: 88971 gggaac 88976
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 771 bits (389), Expect = 0.0 Identities = 509/545 (93%), Gaps = 7/545 (1%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| |||||||||||||||| ||| ||||||||||| |||||| ||||||| Sbjct: 142792 gaaaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaa 142734 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142733 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 142674 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142673 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 142614 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgccg 239 ||||||||||||||||| |||||||||| ||||||||||||||||| | || ||||| | Sbjct: 142613 acggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgctg 142554 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 |||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 142553 caccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgag 142494 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 142493 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaata 142434 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 142433 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 142374 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | ||||||||||||||||||| | || | Sbjct: 142373 gggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagccaggg-- 142319 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142318 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 142259 Query: 540 ggaac 544 ||||| Sbjct: 142258 ggaac 142254 Score = 771 bits (389), Expect = 0.0 Identities = 509/545 (93%), Gaps = 7/545 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| |||||||||||||||| ||| ||||||||||| |||||| ||||||| Sbjct: 110536 gaaaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaa 110594 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110595 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 110654 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110655 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 110714 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgccg 239 ||||||||||||||||| |||||||||| ||||||||||||||||| | || ||||| | Sbjct: 110715 acggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgctg 110774 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 |||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 110775 caccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgag 110834 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 110835 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaata 110894 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 110895 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 110954 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | ||||||||||||||||||| | || | Sbjct: 110955 gggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagccaggg-- 111009 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111010 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 111069 Query: 540 ggaac 544 ||||| Sbjct: 111070 ggaac 111074
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 767 bits (387), Expect = 0.0 Identities = 506/543 (93%), Gaps = 6/543 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||| ||||||| ||||||||||||||| |||||| ||||||| Sbjct: 4318 gaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaa 4376 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4377 ttcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 4436 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 4437 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaa 4496 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||| ||||||||||||| | || || || Sbjct: 4497 acggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaatgttgc 4556 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4557 accctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 4616 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4617 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 4676 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 4677 tcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcgg 4736 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | | Sbjct: 4737 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagctgggg--c 4791 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4792 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 4851 Query: 541 gaa 543 ||| Sbjct: 4852 gaa 4854
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 767 bits (387), Expect = 0.0 Identities = 506/543 (93%), Gaps = 6/543 (1%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||| ||||||| ||||||||||||||| |||||| ||||||| Sbjct: 23607 gaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaa 23549 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23548 ttcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 23489 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 23488 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaa 23429 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||| ||||||||||||| | || || || Sbjct: 23428 acggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaatgttgc 23369 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23368 accctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 23309 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23308 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 23249 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 23248 tcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcgg 23189 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | |||||||||||||||||||| | | | | Sbjct: 23188 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagctgggg--c 23134 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23133 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 23074 Query: 541 gaa 543 ||| Sbjct: 23073 gaa 23071
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 765 bits (386), Expect = 0.0 Identities = 488/518 (94%), Gaps = 7/518 (1%) Strand = Plus / Minus Query: 18 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 77 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 78 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 138 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 198 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 256 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 257 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 214 Query: 317 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 376 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 213 aatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgata 154 Query: 377 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaatagaacg 436 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 153 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 94 Query: 437 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 496 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 93 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 39 Query: 497 ttgaagaatgagccggcgactcataggcagtggcttgg 534 |||||||||||||||||||||||||||||||||||||| Sbjct: 38 ttgaagaatgagccggcgactcataggcagtggcttgg 1
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 759 bits (383), Expect = 0.0 Identities = 506/543 (93%), Gaps = 7/543 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||| ||||||| ||||||||||||||| |||||| ||||||| Sbjct: 4587 gaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaa 4645 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4646 ttcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 4705 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4706 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 4765 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||||| || || || || Sbjct: 4766 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaatgttgc 4825 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4826 accctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 4885 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4886 aacatggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 4945 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 4946 tcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcgg 5005 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | ||||||||| |||||||||| | | | | Sbjct: 5006 ggagtgaaatagaacatgaaaccg---taagctcccaa-cagtgggaggagctgggg--c 5059 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5060 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 5119 Query: 541 gaa 543 ||| Sbjct: 5120 gaa 5122
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 759 bits (383), Expect = 0.0 Identities = 506/543 (93%), Gaps = 7/543 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||| ||||||| ||||||||||||||| |||||| ||||||| Sbjct: 4587 gaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaa 4645 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4646 ttcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 4705 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4706 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 4765 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||||| || || || || Sbjct: 4766 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaatgttgc 4825 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4826 accctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 4885 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4886 aacatggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 4945 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 4946 tcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcgg 5005 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | ||||||||| |||||||||| | | | | Sbjct: 5006 ggagtgaaatagaacatgaaaccg---taagctcccaa-cagtgggaggagctgggg--c 5059 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5060 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 5119 Query: 541 gaa 543 ||| Sbjct: 5120 gaa 5122
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 757 bits (382), Expect = 0.0 Identities = 462/486 (95%), Gaps = 6/486 (1%) Strand = Plus / Plus Query: 53 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 112 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 113 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 173 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 231 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 232 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 291 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 292 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 352 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 411 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 412 ccccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 471 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 377 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 433 Query: 472 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 531 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 491 Query: 532 tggtta 537 |||||| Sbjct: 492 tggtta 497
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 755 bits (381), Expect = 0.0 Identities = 505/544 (92%), Gaps = 7/544 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| |||||||||||||||| |||||| |||||||| |||| | ||||||| Sbjct: 95 gaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-tgctgaa 153 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 213 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 273 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||| | || |||||| | Sbjct: 274 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggt 333 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 334 accctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 393 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 453 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| || Sbjct: 454 tcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcgg 513 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||| ||| |||||||| | ||||| |||||||||||||| || || | Sbjct: 514 ggagtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggagacag---gc 567 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 568 tctgaacgcgtgcctgttgaaaaatgagccggcgactcatacgcagtggcttggttaagg 627 Query: 541 gaac 544 |||| Sbjct: 628 gaac 631
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 753 bits (380), Expect = 0.0 Identities = 448/469 (95%), Gaps = 4/469 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||| Sbjct: 46339 gaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaa 46397 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 46398 tccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccagaggaaaag 46457 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 46458 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaa 46517 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||| Sbjct: 46518 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtaccgc 46577 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46578 accctagatggctagagtccagtagccgaaagcatcactagcttatgctctgacccgagt 46637 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46638 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 46697 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 46698 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 46757 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 469 | ||||||||||||| |||||||| | ||||| |||||||||||||| Sbjct: 46758 ggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggagg 46803 Score = 129 bits (65), Expect = 1e-26 Identities = 65/65 (100%) Strand = Plus / Plus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 540 ggaac 544 ||||| Sbjct: 46878 ggaac 46882
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 753 bits (380), Expect = 0.0 Identities = 448/469 (95%), Gaps = 4/469 (0%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||||||||||||||| |||| | ||||||| Sbjct: 130448 gaaaataagcatagatccggagattcccgaataggtcaacctttcgaactac-tgctgaa 130390 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130389 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 130330 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130329 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 130270 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||| Sbjct: 130269 acggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagtgccgc 130210 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130209 accctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagt 130150 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130149 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 130090 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| || Sbjct: 130089 tcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 130030 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 469 | ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 130029 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 129984 Score = 753 bits (380), Expect = 0.0 Identities = 448/469 (95%), Gaps = 4/469 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||||||||||||||| |||| | ||||||| Sbjct: 102008 gaaaataagcatagatccggagattcccgaataggtcaacctttcgaactac-tgctgaa 102066 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102067 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 102126 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102127 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 102186 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||| Sbjct: 102187 acggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagtgccgc 102246 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102247 accctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagt 102306 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102307 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 102366 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| || Sbjct: 102367 tcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcgg 102426 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 469 | ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 102427 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 102472 Score = 119 bits (60), Expect = 1e-23 Identities = 63/64 (98%) Strand = Plus / Minus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 540 ggaa 543 |||| Sbjct: 129909 ggaa 129906 Score = 119 bits (60), Expect = 1e-23 Identities = 63/64 (98%) Strand = Plus / Plus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 540 ggaa 543 |||| Sbjct: 102547 ggaa 102550
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 753 bits (380), Expect = 0.0 Identities = 510/546 (93%), Gaps = 12/546 (2%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||||| Sbjct: 187 gaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaa 245 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagt-agccagaggaaaa 119 |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 246 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtgagccagaggaaaa 305 Query: 120 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 306 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 365 Query: 180 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag-cggttgagtgcc 238 |||||| ||||||||||||||||||||||| |||||||||||||||| || || ||| Sbjct: 366 aacggg-ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagacgcccgaatgct 424 Query: 239 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 298 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 484 Query: 299 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 358 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 485 gtagcatggggcacgtggaatcccgtgtgaatcgacaaggaccaccttgcaaggctaaat 544 Query: 359 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccant 418 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 545 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-ccccatc 603 Query: 419 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 478 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 604 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggcca----gg 656 Query: 479 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 538 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 657 gctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 716 Query: 539 gggaac 544 |||||| Sbjct: 717 gggaac 722
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 747 bits (377), Expect = 0.0 Identities = 506/545 (92%), Gaps = 7/545 (1%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| |||||| ||||||||| |||||| ||||||| Sbjct: 52599 gaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-tgctgaa 52541 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 52540 tccatgggcagacaagagataacctggcgaactgaaacatcttagtagccagaggaaaag 52481 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 52480 aaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaa 52421 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccg 239 |||||||||||||||||||||| ||| || ||||||||||||||| | | |||| ||| | Sbjct: 52420 acggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctg 52361 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||| Sbjct: 52360 caccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccgag 52301 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52300 tagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 52241 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| || Sbjct: 52240 ctcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattg 52181 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 52180 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg-- 52126 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 52125 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 52066 Query: 540 ggaac 544 ||||| Sbjct: 52065 ggaac 52061 Score = 747 bits (377), Expect = 0.0 Identities = 506/545 (92%), Gaps = 7/545 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| |||||| ||||||||| |||||| ||||||| Sbjct: 37229 gaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-tgctgaa 37287 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 37288 tccatgggcagacaagagataacctggcgaactgaaacatcttagtagccagaggaaaag 37347 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 37348 aaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaa 37407 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccg 239 |||||||||||||||||||||| ||| || ||||||||||||||| | | |||| ||| | Sbjct: 37408 acggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctg 37467 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||| Sbjct: 37468 caccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccgag 37527 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37528 tagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 37587 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| || Sbjct: 37588 ctcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattg 37647 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 37648 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg-- 37702 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 37703 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 37762 Query: 540 ggaac 544 ||||| Sbjct: 37763 ggaac 37767
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 747 bits (377), Expect = 0.0 Identities = 506/545 (92%), Gaps = 7/545 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| |||||| ||||||||| |||||| ||||||| Sbjct: 4157 gaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-tgctgaa 4215 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 4216 tccatgggcagacaagagataacctggcgaactgaaacatcttagtagccagaggaaaag 4275 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 4276 aaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaa 4335 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccg 239 |||||||||||||||||||||| ||| || ||||||||||||||| | | |||| ||| | Sbjct: 4336 acggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctg 4395 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||| Sbjct: 4396 caccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccgag 4455 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4456 tagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 4515 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| || Sbjct: 4516 ctcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattg 4575 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 4576 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg-- 4630 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4631 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 4690 Query: 540 ggaac 544 ||||| Sbjct: 4691 ggaac 4695
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 743 bits (375), Expect = 0.0 Identities = 509/547 (93%), Gaps = 9/547 (1%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgctga 59 |||||||||| ||||||||| ||||||| | |||||||||||||| |||||| |||||| Sbjct: 131784 gaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctga 131726 Query: 60 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 119 ||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 131725 atccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagaggaaaa 131666 Query: 120 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131665 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 131606 Query: 180 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgc 237 ||||||||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| Sbjct: 131605 aacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgc 131546 Query: 238 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 297 |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 131545 tgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccg 131486 Query: 298 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131485 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 131426 Query: 358 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccan 417 |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 131425 tactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccat 131366 Query: 418 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagt 476 ||| ||||||||||||| |||||||| | |||||||||||||||||||| || | Sbjct: 131365 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaggctcgg 131309 Query: 477 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 536 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131308 ga-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 131250 Query: 537 aagggaa 543 ||||||| Sbjct: 131249 aagggaa 131243 Score = 743 bits (375), Expect = 0.0 Identities = 509/547 (93%), Gaps = 9/547 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgctga 59 |||||||||| ||||||||| ||||||| | |||||||||||||| |||||| |||||| Sbjct: 103610 gaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctga 103668 Query: 60 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 119 ||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 103669 atccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagaggaaaa 103728 Query: 120 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103729 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 103788 Query: 180 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgc 237 ||||||||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| Sbjct: 103789 aacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgc 103848 Query: 238 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 297 |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 103849 tgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccg 103908 Query: 298 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103909 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 103968 Query: 358 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccan 417 |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 103969 tactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccat 104028 Query: 418 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagt 476 ||| ||||||||||||| |||||||| | |||||||||||||||||||| || | Sbjct: 104029 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaggctcgg 104085 Query: 477 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 536 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104086 ga-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 104144 Query: 537 aagggaa 543 ||||||| Sbjct: 104145 aagggaa 104151
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 737 bits (372), Expect = 0.0 Identities = 446/469 (95%), Gaps = 4/469 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 95 gaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaa 153 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 154 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaag 213 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 273 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || Sbjct: 274 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgc 333 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 334 accctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagt 393 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 453 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| || Sbjct: 454 tcctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccccatcgg 513 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 469 | ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 514 ggagtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 514 gactcataggcagtggcttggttaagggaac 544 ||||||||| |||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac 622
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 737 bits (372), Expect = 0.0 Identities = 446/469 (95%), Gaps = 4/469 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 95 gaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaa 153 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 154 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaag 213 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 273 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || Sbjct: 274 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgc 333 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 334 accctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagt 393 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 453 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| | Sbjct: 454 tcctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccccatccg 513 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 469 | ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 514 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 105 bits (53), Expect = 2e-19 Identities = 62/65 (95%) Strand = Plus / Plus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 540 ggaac 544 ||||| Sbjct: 641 ggaac 645
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 737 bits (372), Expect = 0.0 Identities = 446/469 (95%), Gaps = 4/469 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 95 gaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaa 153 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 154 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaag 213 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 273 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || Sbjct: 274 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgc 333 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | ||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 334 accctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgacccgagt 393 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 453 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| || Sbjct: 454 tcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcgg 513 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 469 | ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 514 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 97.6 bits (49), Expect = 4e-17 Identities = 62/65 (95%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 540 ggaac 544 ||||| Sbjct: 640 ggaac 644
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 733 bits (370), Expect = 0.0 Identities = 506/550 (92%), Gaps = 10/550 (1%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||| |||||||||||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 128359 gaaaacaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaa 128301 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 128300 ttcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaagg 128241 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 128240 aaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaaccgtgaaa 128181 Query: 181 acggggttgtgggagagc------aatacaagcgttgtgctgctaggcgaagcggttgag 234 ||||||||||||| |||| ||||||||| |||||||||||||||||||||||||| Sbjct: 128180 acggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagcggttgag 128121 Query: 235 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 294 | |||||||||||||||| | |||||||||||||||||||||||||||| | ||||| || Sbjct: 128120 tcccgcaccctagatggcaagagtccagtagccgaaagcatcactagctcacgctctaac 128061 Query: 295 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 354 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128060 ccaagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 128001 Query: 355 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 414 |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 128000 aaatactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaagaacccc 127941 Query: 415 cantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 474 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 127940 cataggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaat 127884 Query: 475 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 534 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 127883 tggatctctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcctgg 127824 Query: 535 ttaagggaac 544 |||||||||| Sbjct: 127823 ttaagggaac 127814 Score = 733 bits (370), Expect = 0.0 Identities = 506/550 (92%), Gaps = 10/550 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||| |||||||||||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 95088 gaaaacaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaa 95146 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 95147 ttcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaagg 95206 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 95207 aaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaaccgtgaaa 95266 Query: 181 acggggttgtgggagagc------aatacaagcgttgtgctgctaggcgaagcggttgag 234 ||||||||||||| |||| ||||||||| |||||||||||||||||||||||||| Sbjct: 95267 acggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagcggttgag 95326 Query: 235 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 294 | |||||||||||||||| | |||||||||||||||||||||||||||| | ||||| || Sbjct: 95327 tcccgcaccctagatggcaagagtccagtagccgaaagcatcactagctcacgctctaac 95386 Query: 295 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 354 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95387 ccaagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 95446 Query: 355 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 414 |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 95447 aaatactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaagaacccc 95506 Query: 415 cantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 474 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 95507 cataggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaat 95563 Query: 475 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 534 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 95564 tggatctctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcctgg 95623 Query: 535 ttaagggaac 544 |||||||||| Sbjct: 95624 ttaagggaac 95633
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 729 bits (368), Expect = 0.0 Identities = 445/469 (94%), Gaps = 4/469 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 95 gaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaa 153 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 154 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaag 213 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 273 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || Sbjct: 274 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgc 333 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | ||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 334 accctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgacccgagt 393 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 453 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| | Sbjct: 454 tcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatccg 513 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 469 | ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 514 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 61.9 bits (31), Expect = 2e-06 Identities = 53/59 (89%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 538 |||||| ||||||||||||||| ||||| || |||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatga-cccgcgaatcataagcagtggcttggttaa 638
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 729 bits (368), Expect = 0.0 Identities = 445/469 (94%), Gaps = 4/469 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 95 gaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaa 153 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 154 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaag 213 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 273 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || Sbjct: 274 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgc 333 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | ||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 334 accctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgacccgagt 393 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 453 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| || Sbjct: 454 tcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcgg 513 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 469 | ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 514 ggagtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 81.8 bits (41), Expect = 2e-12 Identities = 60/65 (92%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 540 ggaac 544 ||||| Sbjct: 640 ggaac 644
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 716 bits (361), Expect = 0.0 Identities = 499/542 (92%), Gaps = 5/542 (0%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||||||| Sbjct: 116122 gaaaataagtatagatccggagattcccgaataggttaacctttgaaactgc-tgctgaa 116064 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 | ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116063 ttcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 116004 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 116003 aaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaa 115944 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||| ||||||| |||| | | ||| |||||| ||||||||||||| ||||||| | || Sbjct: 115943 acggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgagtcctgc 115885 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||| ||||||||||| ||||||||| |||||||||| ||||| |||||||| Sbjct: 115884 accctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaacccgagt 115825 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 115824 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatac 115765 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 115764 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 115705 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | |||||||||||||||||||| ||| ||| Sbjct: 115704 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaattgaatc 115648 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 115647 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagg 115588 Query: 541 ga 542 || Sbjct: 115587 ga 115586 Score = 716 bits (361), Expect = 0.0 Identities = 499/542 (92%), Gaps = 5/542 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||||||| Sbjct: 85998 gaaaataagtatagatccggagattcccgaataggttaacctttgaaactgc-tgctgaa 86056 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 | ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86057 ttcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 86116 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 86117 aaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaa 86176 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||| ||||||| |||| | | ||| |||||| ||||||||||||| ||||||| | || Sbjct: 86177 acggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgagtcctgc 86235 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||| ||||||||||| ||||||||| |||||||||| ||||| |||||||| Sbjct: 86236 accctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaacccgagt 86295 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 86296 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatac 86355 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 86356 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 86415 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | |||||||||||||||||||| ||| ||| Sbjct: 86416 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaattgaatc 86472 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 86473 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagg 86532 Query: 541 ga 542 || Sbjct: 86533 ga 86534
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 716 bits (361), Expect = 0.0 Identities = 474/508 (93%), Gaps = 7/508 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| ||||||||||||||||| ||||||||||||||| |||||| ||||||| Sbjct: 136 gaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tgctgaa 194 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 195 tccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggaggaaaag 254 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 314 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| Sbjct: 315 acggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccga 374 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 375 accctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagt 434 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 435 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 494 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 495 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcgg 554 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgat 479 | ||||||||||||| |||||||| | ||||||||||||| |||||| | || | Sbjct: 555 ggagtgaaatagaacatgaaaccg---taagctcccaagcagngggaggagcccaggg-- 609 Query: 480 ctctgaccgcgtgcctgttgaagaatga 507 |||||||||||||||||||||||||||| Sbjct: 610 ctctgaccgcgtgcctgttgaagaatga 637
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 712 bits (359), Expect = 0.0 Identities = 499/544 (91%), Gaps = 4/544 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||| ||||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 88 gaaaataagcatggatccggagattcccgaataggttaaccttttgaactgc-tgctgaa 146 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 | ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 ttcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 206 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 207 aaagcaaaagcgattcccatagtagcggcgagcgaaatgggagtagcctaaaccgtgaaa 266 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||| |||||| | |||||||| |||||||||||| ||||| | | || Sbjct: 267 acggggttgtgggggagcaaagtaggcgttgtgtcgctaggcgaagcagttgaatcctgc 326 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||| ||||||| | |||||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 327 accatagatggtgagagtccagtagccgaaagcatcactagtttatgctctaacccgagt 386 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 387 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatac 446 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 447 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatagg 506 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | |||||||||||||||||||| ||| ||| Sbjct: 507 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatc 563 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 564 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaagg 623 Query: 541 gaac 544 |||| Sbjct: 624 gaac 627
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 710 bits (358), Expect = 0.0 Identities = 364/366 (99%) Strand = Plus / Plus Query: 11 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 70 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 71 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 131 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 191 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 251 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 310 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 300 Query: 311 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 360 Query: 371 ccgata 376 |||||| Sbjct: 361 ccgata 366
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 706 bits (356), Expect = 0.0 Identities = 397/412 (96%), Gaps = 13/412 (3%) Strand = Plus / Minus Query: 137 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 197 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 257 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 316 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 317 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 371 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 372 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaata 431 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 432 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 491 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 492 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 543 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 75075 Score = 272 bits (137), Expect = 1e-69 Identities = 140/141 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 75625 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 75566 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75565 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 75506 Query: 121 aaagcaaaagcgattcccgta 141 ||||||||||||||||||||| Sbjct: 75505 aaagcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 68 gcaggcaagagacaacctggcgaactgaaacatcttagta 107 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 368 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 414 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 706 bits (356), Expect = 0.0 Identities = 397/412 (96%), Gaps = 13/412 (3%) Strand = Plus / Plus Query: 137 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 197 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 257 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 316 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 317 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 371 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 372 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaata 431 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 432 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 491 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 492 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 543 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 382463 Score = 272 bits (137), Expect = 1e-69 Identities = 140/141 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 381913 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 381972 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381973 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 382032 Query: 121 aaagcaaaagcgattcccgta 141 ||||||||||||||||||||| Sbjct: 382033 aaagcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 68 gcaggcaagagacaacctggcgaactgaaacatcttagta 107 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 68 gcaggcaagagacaacctggcgaactgaaacatcttagta 107 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 368 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 414 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 368 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 414 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 706 bits (356), Expect = 0.0 Identities = 397/412 (96%), Gaps = 13/412 (3%) Strand = Plus / Minus Query: 137 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 197 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 257 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 316 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 317 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 371 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 372 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaata 431 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 432 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 491 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 492 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 543 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 113166 Score = 272 bits (137), Expect = 1e-69 Identities = 140/141 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 113716 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 113657 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113656 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 113597 Query: 121 aaagcaaaagcgattcccgta 141 ||||||||||||||||||||| Sbjct: 113596 aaagcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 68 gcaggcaagagacaacctggcgaactgaaacatcttagta 107 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 368 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 414 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 706 bits (356), Expect = 0.0 Identities = 397/412 (96%), Gaps = 13/412 (3%) Strand = Plus / Minus Query: 137 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 197 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 257 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 316 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 317 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 371 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 372 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaata 431 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 432 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 491 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 492 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 543 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 367848 Score = 706 bits (356), Expect = 0.0 Identities = 397/412 (96%), Gaps = 13/412 (3%) Strand = Plus / Minus Query: 137 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 197 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 257 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 316 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 317 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 371 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 372 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaata 431 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 432 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 491 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 492 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 543 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 184453 Score = 272 bits (137), Expect = 1e-69 Identities = 140/141 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 368398 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 368339 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368338 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 368279 Query: 121 aaagcaaaagcgattcccgta 141 ||||||||||||||||||||| Sbjct: 368278 aaagcaaaagcgattcccgta 368258 Score = 272 bits (137), Expect = 1e-69 Identities = 140/141 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 185003 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 184944 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184943 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 184884 Query: 121 aaagcaaaagcgattcccgta 141 ||||||||||||||||||||| Sbjct: 184883 aaagcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 68 gcaggcaagagacaacctggcgaactgaaacatcttagta 107 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 368 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 414 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 706 bits (356), Expect = 0.0 Identities = 500/545 (91%), Gaps = 5/545 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 2131 gaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaa 2189 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2190 ttcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 2249 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 2250 aaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaa 2309 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| | || Sbjct: 2310 acggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgc 2369 Query: 241 accctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccgag 299 ||||||||||| | |||||||||||||||||||| || | || ||||||| ||||||| Sbjct: 2370 accctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgag 2429 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2430 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaata 2489 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 2490 ctcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcg 2549 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| ||| || Sbjct: 2550 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaat 2606 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 2607 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaag 2666 Query: 540 ggaac 544 ||||| Sbjct: 2667 ggaac 2671
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 706 bits (356), Expect = 0.0 Identities = 500/545 (91%), Gaps = 5/545 (0%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 118062 gaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaa 118004 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118003 ttcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 117944 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 117943 aaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaa 117884 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| | || Sbjct: 117883 acggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgc 117824 Query: 241 accctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccgag 299 ||||||||||| | |||||||||||||||||||| || | || ||||||| ||||||| Sbjct: 117823 accctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgag 117764 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 117763 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaata 117704 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 117703 ctcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcg 117644 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| ||| || Sbjct: 117643 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaat 117587 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 117586 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaag 117527 Query: 540 ggaac 544 ||||| Sbjct: 117526 ggaac 117522 Score = 706 bits (356), Expect = 0.0 Identities = 500/545 (91%), Gaps = 5/545 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 90040 gaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaa 90098 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90099 ttcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 90158 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 90159 aaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaa 90218 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| | || Sbjct: 90219 acggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgc 90278 Query: 241 accctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccgag 299 ||||||||||| | |||||||||||||||||||| || | || ||||||| ||||||| Sbjct: 90279 accctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgag 90338 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 90339 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaata 90398 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 90399 ctcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcg 90458 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| ||| || Sbjct: 90459 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaat 90515 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 90516 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaag 90575 Query: 540 ggaac 544 ||||| Sbjct: 90576 ggaac 90580
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 702 bits (354), Expect = 0.0 Identities = 497/543 (91%), Gaps = 4/543 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||| |||||||||||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 3977 gaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaa 4035 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 | || || | |||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 4036 ttcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagag 4095 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 4096 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaa 4155 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | || Sbjct: 4156 acggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgc 4215 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||| |||||| | ||||||||||||||||||| |||| |||| || | |||||||| Sbjct: 4216 accccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagt 4275 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4276 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 4335 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 4336 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 4395 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| ||||| || | |||| |||||||||| |||| ||| |||| Sbjct: 4396 ggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatc 4452 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 4453 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagg 4512 Query: 541 gaa 543 ||| Sbjct: 4513 gaa 4515
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 702 bits (354), Expect = 0.0 Identities = 501/548 (91%), Gaps = 8/548 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||| || ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 88 gaaaataagtatggatccggagattcccgaataggttaaccttttaaactgc-tgctgaa 146 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 | ||| || |||||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 147 ttcataggcgggcaagagacaacccggcgaactgaaacatcttagtagccggaggaaaag 206 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 207 aaagcaaaagcgattctcgtagtagcggcgagcgaaatgggagcggcctaaaccgtgaaa 266 Query: 181 acggggttgtgggagagcaatacaa----gcgttgtgctgctaggcgaagcggttgagtg 236 ||||||||||||| |||| |||||| || ||| ||||||||||||||| ||||||| Sbjct: 267 acggggttgtgggggagctatacaaataagcattgcgctgctaggcgaagcagttgagtc 326 Query: 237 ccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc 296 | |||||| |||||| | ||||||||| |||||||||| || | |||||||||| |||| Sbjct: 327 ctgcaccccagatggtgagagtccagtaaccgaaagcataacaatcttatgctctaaccc 386 Query: 297 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 446 Query: 357 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 506 Query: 417 ntgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 476 ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 507 tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcg 563 Query: 477 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 536 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 564 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 623 Query: 537 aagggaac 544 |||||||| Sbjct: 624 aagggaac 631
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 702 bits (354), Expect = 0.0 Identities = 497/543 (91%), Gaps = 4/543 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||| |||||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 71 gaaaataagtatagatccggagattcccgaataggttaaccttttaaactgc-tgctgaa 129 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 ||||| || |||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 130 tccataggcgggcaagagacaacctggcgaactgaaacatcttagtagccggaggaagag 189 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 190 aaagcaaaagcgattctcgtagtagcggcgagcgaaacgggagcagcctaaaccgtgaaa 249 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||| |||| | | |||| |||| ||||||||||||| ||||||| | || Sbjct: 250 acggggttgtgggggagctaaagaagcattgtattgctaggcgaagcagttgagtcctgc 309 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||| | ||||||||| |||||||||| || ||||| ||||| |||||||| Sbjct: 310 accctagatggtgagagtccagtaaccgaaagcattacaagcttgggctctaacccgagt 369 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 370 aacatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 429 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 430 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 489 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| | |||| ||||||||||||||| ||| |||| Sbjct: 490 ggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggagaatcggatc 546 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 547 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagg 606 Query: 541 gaa 543 ||| Sbjct: 607 gaa 609
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 702 bits (354), Expect = 0.0 Identities = 497/543 (91%), Gaps = 4/543 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||| |||||||||||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 87 gaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaa 145 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 | || || | |||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 146 ttcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagag 205 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 206 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaa 265 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | || Sbjct: 266 acggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgc 325 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||| |||||| | ||||||||||||||||||| |||| |||| || | |||||||| Sbjct: 326 accccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagt 385 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 445 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 446 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 505 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| ||||| || | |||| |||||||||| |||| ||| |||| Sbjct: 506 ggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatc 562 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 563 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagg 622 Query: 541 gaa 543 ||| Sbjct: 623 gaa 625
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 702 bits (354), Expect = 0.0 Identities = 497/543 (91%), Gaps = 4/543 (0%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||| |||||||||||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 151158 gaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaa 151100 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 | || || | |||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 151099 ttcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagag 151040 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 151039 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaa 150980 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | || Sbjct: 150979 acggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgc 150920 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||| |||||| | ||||||||||||||||||| |||| |||| || | |||||||| Sbjct: 150919 accccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagt 150860 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150859 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 150800 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 150799 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 150740 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| ||||| || | |||| |||||||||| |||| ||| |||| Sbjct: 150739 ggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatc 150683 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 150682 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagg 150623 Query: 541 gaa 543 ||| Sbjct: 150622 gaa 150620 Score = 702 bits (354), Expect = 0.0 Identities = 497/543 (91%), Gaps = 4/543 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||| |||||||||||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 117508 gaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaa 117566 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 | || || | |||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 117567 ttcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagag 117626 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 117627 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaa 117686 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | || Sbjct: 117687 acggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgc 117746 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||| |||||| | ||||||||||||||||||| |||| |||| || | |||||||| Sbjct: 117747 accccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagt 117806 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117807 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 117866 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 117867 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 117926 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| ||||| || | |||| |||||||||| |||| ||| |||| Sbjct: 117927 ggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatc 117983 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 117984 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagg 118043 Query: 541 gaa 543 ||| Sbjct: 118044 gaa 118046
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 702 bits (354), Expect = 0.0 Identities = 497/543 (91%), Gaps = 4/543 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||| |||||||||||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 87 gaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaa 145 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 | || || | |||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 146 ttcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagaggaagag 205 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 206 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaa 265 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| | || Sbjct: 266 acggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgc 325 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||| |||||| | ||||||||||||||||||| |||| |||| || | |||||||| Sbjct: 326 accccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagt 385 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 445 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 446 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 505 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| ||||| || | |||| |||||||||| |||| ||| |||| Sbjct: 506 ggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatc 562 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 563 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagg 622 Query: 541 gaa 543 ||| Sbjct: 623 gaa 625
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 692 bits (349), Expect = 0.0 Identities = 505/545 (92%), Gaps = 18/545 (3%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| ||||||||||||||||| ||||||||| ||| |||| |||||||| Sbjct: 646 gaaaataagcgtagatccggagattcccgaataggtca--ctt---gactg-ctgctgaa 593 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| |||||||||||||| || |||| ||| |||||||||||||||||||||||| Sbjct: 592 tccatg-gcaggcaagagaca--ct-gcga--tga-acatcttagtagccagaggaaaag 540 Query: 121 aaa-gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 179 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 539 aaaggcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 480 Query: 180 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 239 ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||| | Sbjct: 479 aacggggttgtgggagagcgatacaagcgtcgtgctgctaggcgaagcggtggagtgctg 420 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 419 caccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgag 360 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 300 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 299 ctcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 240 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||||||||||||||||||| | | | Sbjct: 239 gggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-ggg 184 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 124 Query: 540 ggaac 544 ||||| Sbjct: 123 ggaac 119
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 690 bits (348), Expect = 0.0 Identities = 498/545 (91%), Gaps = 5/545 (0%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||| ||||| ||||||||||||||| ||||||| |||||||| |||| | ||||||| Sbjct: 146472 gaaaatgagcatggatccggagattcccgaataggttaaccttttgaactac-tgctgaa 146414 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 | ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 146413 ttcataggcaggcgagagacaacctggcgaactgaaacatcttagtagccagaggaagag 146354 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 146353 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaa 146294 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| | | Sbjct: 146293 acggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgagtcctgt 146234 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctgacccgag 299 ||||||||||| | |||||||||||||||||||||||| || |||||||| ||||||| Sbjct: 146233 accctagatggtgagagtccagtagccgaaagcatcactggctttatgctccaacccgag 146174 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 146173 tagcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaata 146114 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct: 146113 ctcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcg 146054 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | ||||||||||||||||||| ||| ||| Sbjct: 146053 gggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagaatcggat 145997 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 | |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 145996 ccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaag 145937 Query: 540 ggaac 544 ||||| Sbjct: 145936 ggaac 145932 Score = 690 bits (348), Expect = 0.0 Identities = 498/545 (91%), Gaps = 5/545 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||| ||||| ||||||||||||||| ||||||| |||||||| |||| | ||||||| Sbjct: 111990 gaaaatgagcatggatccggagattcccgaataggttaaccttttgaactac-tgctgaa 112048 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 | ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 112049 ttcataggcaggcgagagacaacctggcgaactgaaacatcttagtagccagaggaagag 112108 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 112109 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaa 112168 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| | | Sbjct: 112169 acggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgagtcctgt 112228 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctgacccgag 299 ||||||||||| | |||||||||||||||||||||||| || |||||||| ||||||| Sbjct: 112229 accctagatggtgagagtccagtagccgaaagcatcactggctttatgctccaacccgag 112288 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 112289 tagcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaata 112348 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct: 112349 ctcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcg 112408 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | ||||||||||||||||||| ||| ||| Sbjct: 112409 gggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagaatcggat 112465 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 | |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 112466 ccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaag 112525 Query: 540 ggaac 544 ||||| Sbjct: 112526 ggaac 112530
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 678 bits (342), Expect = 0.0 Identities = 444/475 (93%), Gaps = 5/475 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| |||||||||||||||| |||||| |||||||| |||| | ||||||| Sbjct: 95 gaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-tgctgaa 153 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 213 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 273 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||| | || |||||| | Sbjct: 274 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggt 333 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 334 accctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 393 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 453 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct: 454 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-ccccatcgg 512 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 475 | ||||||||| ||| |||||||| | ||||| |||||||||||||| ||||| Sbjct: 513 ggagtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggagaaag 564
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 650 bits (328), Expect = 0.0 Identities = 396/415 (95%), Gaps = 4/415 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 84 gaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctgaa 142 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 202 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 262 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| |||||||||||||||||||| || | | || Sbjct: 263 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggaatactgc 322 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 323 accctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagt 382 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 383 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 442 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 415 | | |||||||||||| |||||||||||||||||||| |||| ||||||||||| Sbjct: 443 tac--ggtgaccgatagtgaagtagtaccgtgagggaagggtg-aaagaaccccc 494
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 644 bits (325), Expect = 0.0 Identities = 386/405 (95%), Gaps = 1/405 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||| ||| Sbjct: 64 gaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgccgaa 122 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 123 tccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaaaag 182 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 242 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||||||||||||||| ||||||||||||||||||| || |||| Sbjct: 243 acggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggccgaacaccgc 302 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 303 accctagatggtgggagtccagtagccgaaagcatcactagcttacgctctgacccgagt 362 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 422 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 405 |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 423 tcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaa 467
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 628 bits (317), Expect = e-177 Identities = 492/545 (90%), Gaps = 8/545 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||| |||||||| ||| || ||||||| | ||||| |||| || Sbjct: 87 gaaaataagcatagatccgtagattcccgaatggggtaacctttcacactgc-tgctcaa 145 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146 tccatgggcaggaaagagacaacctggcgaactgaaacatcttagtagccagaggaaaat 205 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||| Sbjct: 206 aaagcaaaagcgattcccatagtagcggcgagcgaaatgggatcagcctaaaccgcgaaa 265 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccg 239 |||||||||||||||||||||| |||||| ||||||||||||||||| | || | || | Sbjct: 266 acggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcagcttaaatgatg 325 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 299 ||||||||||||| |||||||||||| | |||||||||||| || ||||||||||||| Sbjct: 326 caccctagatggcgaaagtccagtagtcaaaagcatcactacgttgcgctctgacccgag 385 Query: 300 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 359 ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 tagcatgggacacgtgtaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 445 Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||||| ||| |||| ||||||||||||||||||| ||||||||||| ||||| || Sbjct: 446 ctcctgggtaaccaatagtaaagtagtaccgtgagggaagggtgaaaagaa-ccccattg 504 Query: 420 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 479 || ||||||||||||| |||||||| | |||| ||||||||||||||| | || | Sbjct: 505 gggagtgaaatagaacatgaaaccg---taagctaccaagcagtgggaggagccaggg-- 559 Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 619 Query: 540 ggaac 544 ||||| Sbjct: 620 ggaac 624
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 603 bits (304), Expect = e-169 Identities = 316/320 (98%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 123383 gaaattaagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 123324 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123323 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 123264 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123263 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 123204 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123203 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 123144 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 123143 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgccccgagt 123084 Query: 301 agcatggggcacgtggaatc 320 |||||||||||||||||||| Sbjct: 123083 agcatggggcacgtggaatc 123064 Score = 436 bits (220), Expect = e-119 Identities = 234/238 (98%), Gaps = 2/238 (0%) Strand = Plus / Minus Query: 312 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 372 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaata 431 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 432 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 492 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacgga 547 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacgga 122583
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 603 bits (304), Expect = e-169 Identities = 316/320 (98%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 12825924 gaaattaagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 12825865 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825864 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 12825805 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825804 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 12825745 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825744 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 12825685 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 12825684 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgccccgagt 12825625 Query: 301 agcatggggcacgtggaatc 320 |||||||||||||||||||| Sbjct: 12825624 agcatggggcacgtggaatc 12825605 Score = 436 bits (220), Expect = e-119 Identities = 234/238 (98%), Gaps = 2/238 (0%) Strand = Plus / Minus Query: 312 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 372 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaata 431 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 432 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 492 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacgga 547 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacgga 12825124 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 257 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 316 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 575 bits (290), Expect = e-161 Identities = 295/297 (99%) Strand = Plus / Plus Query: 251 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 310 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 311 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 371 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaat 430 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 431 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 491 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 547 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 297
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 38 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 97 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 98 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 157 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 158 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 217 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 218 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 277 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 278 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 337 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 338 gaccaccttgcaaggctaaatactcctgggtg 369 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 476 bits (240), Expect = e-131 Identities = 466/541 (86%), Gaps = 3/541 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||| | |||||||||||||||||| ||||||| |||||| ||||||||||||||| Sbjct: 144006 gaaaataggtatagatccggagattcccgaataggttaaccttccaaactgcctgctgaa 144065 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 | || ||||| |||||||||||| ||||||||||||||||||||||||| ||||| | Sbjct: 144066 ttcagaagcagacaagagacaacccggcgaactgaaacatcttagtagccggaggaggaa 144125 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||| ||||| ||||||| |||| |||| ||||||||||||||| Sbjct: 144126 aaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaaccgtgaag 144185 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||| || || | || | ||||||||||| ||||||||| || Sbjct: 144186 acggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgagtgctgc 144245 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||| |||||| | ||||||||||||| ||| | |||||| | |||| |||| ||| Sbjct: 144246 accccagatggtgatagtccagtagccggaagtacagctagctcacgctccaacccaagt 144305 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 ||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 144306 agcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatat 144365 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 ||||| |||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 144366 tcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcgg 144425 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| ||||||||||||||||||||| ||| | |||| Sbjct: 144426 ggagtgaaatagaacatgaaaccg---cgagctcccaagcagtgggaggagaatgagatc 144482 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||| ||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| Sbjct: 144483 tctaaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggcccggttaagg 144542 Query: 541 g 541 | Sbjct: 144543 g 144543 Score = 476 bits (240), Expect = e-131 Identities = 466/541 (86%), Gaps = 3/541 (0%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||| | |||||||||||||||||| ||||||| |||||| ||||||||||||||| Sbjct: 88845 gaaaataggtatagatccggagattcccgaataggttaaccttccaaactgcctgctgaa 88786 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 | || ||||| |||||||||||| ||||||||||||||||||||||||| ||||| | Sbjct: 88785 ttcagaagcagacaagagacaacccggcgaactgaaacatcttagtagccggaggaggaa 88726 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||| ||||| ||||||| |||| |||| ||||||||||||||| Sbjct: 88725 aaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaaccgtgaag 88666 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 240 ||||||||||||||||| || || | || | ||||||||||| ||||||||| || Sbjct: 88665 acggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgagtgctgc 88606 Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 |||| |||||| | ||||||||||||| ||| | |||||| | |||| |||| ||| Sbjct: 88605 accccagatggtgatagtccagtagccggaagtacagctagctcacgctccaacccaagt 88546 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 ||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 88545 agcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatat 88486 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 ||||| |||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 88485 tcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcgg 88426 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | ||||||||||||| |||||||| ||||||||||||||||||||| ||| | |||| Sbjct: 88425 ggagtgaaatagaacatgaaaccg---cgagctcccaagcagtgggaggagaatgagatc 88369 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||| ||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| Sbjct: 88368 tctaaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggcccggttaagg 88309 Query: 541 g 541 | Sbjct: 88308 g 88308
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 476 bits (240), Expect = e-131 Identities = 245/247 (99%) Strand = Plus / Plus Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 240 Query: 541 gaacgga 547 ||||||| Sbjct: 241 gaacgga 247
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 452 bits (228), Expect = e-124 Identities = 417/478 (87%), Gaps = 8/478 (1%) Strand = Plus / Minus Query: 71 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 130 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 139114 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 139055 Query: 131 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 190 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 139054 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 138995 Query: 191 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 246 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 138994 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 138936 Query: 247 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 306 || || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 138935 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 138876 Query: 307 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 366 ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||| Sbjct: 138875 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 138816 Query: 367 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtg 426 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 138815 gtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 138756 Query: 427 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 486 ||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||||| Sbjct: 138755 aaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgac 138699 Query: 487 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 544 ||||||||||||||||||||||||||||||| |||||| | ||| ||||||||||||| Sbjct: 138698 cgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggttaagggaac 138641 Score = 452 bits (228), Expect = e-124 Identities = 417/478 (87%), Gaps = 8/478 (1%) Strand = Plus / Plus Query: 71 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 130 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 82763 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 82822 Query: 131 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 190 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 82823 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 82882 Query: 191 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 246 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 82883 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 82941 Query: 247 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 306 || || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 82942 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 83001 Query: 307 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 366 ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||| Sbjct: 83002 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 83061 Query: 367 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtg 426 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 83062 gtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 83121 Query: 427 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 486 ||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||||| Sbjct: 83122 aaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgac 83178 Query: 487 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 544 ||||||||||||||||||||||||||||||| |||||| | ||| ||||||||||||| Sbjct: 83179 cgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggttaagggaac 83236
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 452 bits (228), Expect = e-124 Identities = 230/231 (99%) Strand = Plus / Plus Query: 317 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 377 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaatagaacg 436 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 437 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 497 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 547 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 231
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 450 bits (227), Expect = e-123 Identities = 330/364 (90%), Gaps = 3/364 (0%) Strand = Plus / Minus Query: 178 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 237 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 238 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 297 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 298 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 358 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccan 417 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 418 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 477 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 478 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 537 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggcttggtta 5928 Query: 538 aggg 541 |||| Sbjct: 5927 aggg 5924 Score = 238 bits (120), Expect = 2e-59 Identities = 157/168 (93%), Gaps = 1/168 (0%) Strand = Plus / Minus Query: 9 gcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgag 68 |||||||||||||||||||| ||||||| |||||||| |||||| ||||||||||||| | Sbjct: 6481 gcatagatccggagattcccgaataggttaaccttttgaactgc-tgctgaatccatggg 6423 Query: 69 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 128 |||| ||| | |||||||| ||||||||||||||||||| ||||||||| |||||||||| Sbjct: 6422 caggtaaggggcaacctggtgaactgaaacatcttagtaaccagaggaagagaaagcaaa 6363 Query: 129 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 176 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6362 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 6315
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 444 bits (224), Expect = e-121 Identities = 314/339 (92%), Gaps = 5/339 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgctga 59 |||||||||| ||||||||| ||||||| | |||||||||||||| |||||| |||||| Sbjct: 2686 gaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctga 2744 Query: 60 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 119 ||||| | |||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 2745 atccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccagaggaaaa 2804 Query: 120 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2805 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 2864 Query: 180 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgc 237 ||||||||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| Sbjct: 2865 aacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgc 2924 Query: 238 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 297 |||||||||||||| | |||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 2925 tgcaccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctctgacccg 2983 Query: 298 agtagcatggggcacgtggaatcccgtgtgaatcagcaa 336 |||||||| |||||||||||||||||||||||||||||| Sbjct: 2984 agtagcatagggcacgtggaatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 444 bits (224), Expect = e-121 Identities = 314/339 (92%), Gaps = 5/339 (1%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcctgctga 59 |||||||||| ||||||||| ||||||| | |||||||||||||| |||||| |||||| Sbjct: 941 gaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-tgctga 999 Query: 60 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 119 ||||| | |||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 1000 atccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccagaggaaaa 1059 Query: 120 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1060 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 1119 Query: 180 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgc 237 ||||||||||||||||||| ||||||| || ||||||||||||||||| | ||| ||| Sbjct: 1120 aacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgc 1179 Query: 238 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 297 |||||||||||||| | |||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 1180 tgcaccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctctgacccg 1238 Query: 298 agtagcatggggcacgtggaatcccgtgtgaatcagcaa 336 |||||||| |||||||||||||||||||||||||||||| Sbjct: 1239 agtagcatagggcacgtggaatcccgtgtgaatcagcaa 1277
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 418 bits (211), Expect = e-114 Identities = 264/280 (94%), Gaps = 4/280 (1%) Strand = Plus / Plus Query: 254 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 313 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 314 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 374 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaataga 433 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 434 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 493 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 494 ctgttgaagaatgagccggcgactcataggcagtggcttg 533 |||||||||||||||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcataggcagtggcttg 278
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 33 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 92 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 93 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 152 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 153 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 212 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 213 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 272 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 273 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 332 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 333 gcaaggaccaccttgcaag 351 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 105 bits (53), Expect = 2e-19 Identities = 62/65 (95%) Strand = Plus / Minus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 540 ggaac 544 ||||| Sbjct: 3189 ggaac 3185 Score = 97.6 bits (49), Expect = 4e-17 Identities = 75/84 (89%) Strand = Plus / Minus Query: 360 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantg 419 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 420 ggtagtgaaatagaacgtgaaacc 443 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 406 bits (205), Expect = e-110 Identities = 208/209 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 85 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 144 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 204 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 264 Query: 181 acggggttgtgggagagcaatacaagcgt 209 ||||||||||||||||||||||||||||| Sbjct: 265 acggggttgtgggagagcaatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 406 bits (205), Expect = e-110 Identities = 208/209 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 85 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 144 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 204 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 264 Query: 181 acggggttgtgggagagcaatacaagcgt 209 ||||||||||||||||||||||||||||| Sbjct: 265 acggggttgtgggagagcaatacaagcgt 293
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 130 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 189 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 190 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 248 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 249 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 308 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 309 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 368 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 369 gaccgata 376 |||||||| Sbjct: 241 gaccgata 248
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 396 bits (200), Expect = e-107 Identities = 274/296 (92%), Gaps = 2/296 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||| ||||||||||||||||||||| |||||| |||||||| |||||| ||||||| Sbjct: 177118 gaaaatcagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctgaa 177176 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||| Sbjct: 177177 tccatgggcaggcaagagagaaccaggcgaactgaaagatcttagtagccagaggaaaag 177236 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 177237 aaagcaaaagcgattcccgtagtagcggcgggcgaaatgggagctgcctaaaccgtgaaa 177296 Query: 181 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccg 239 ||||||||||||||||||||||||||||| |||| |||||||||||| | || ||| | Sbjct: 177297 acggggttgtgggagagcaatacaagcgtcgtgcagctaggcgaagcagcccgaatgctg 177356 Query: 240 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 295 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 177357 caccctagatggcgaaagtccagtagccgaaagcatcactagcttaggctctgacc 177412 Score = 129 bits (65), Expect = 1e-26 Identities = 65/65 (100%) Strand = Plus / Plus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 540 ggaac 544 ||||| Sbjct: 177465 ggaac 177469 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 368 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 368 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 gcgaactgaaacatcttagtagc 109 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 gcgaactgaaacatcttagtagc 109 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 357 bits (180), Expect = 2e-95 Identities = 200/207 (96%) Strand = Plus / Plus Query: 239 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 298 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 299 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 358 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 359 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccant 418 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 419 gggtagtgaaatagaacgtgaaaccgt 445 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 349 bits (176), Expect = 6e-93 Identities = 456/541 (84%), Gaps = 14/541 (2%) Strand = Plus / Plus Query: 2 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 61 ||||||| ||||||||||||||||||| ||||||| ||||||| |||||| |||| | | Sbjct: 88 aaaataaacatagatccggagattcccgaataggtaaaccttt--aactgc-tgcttatt 144 Query: 62 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 121 ||||| |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| | Sbjct: 145 ccatg-gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaata 202 Query: 122 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 181 ||||||||| |||||| |||||| ||| | |||| |||| ||||||||| || |||| Sbjct: 203 aagcaaaagttattcccatagtagtggcaaatgaaaagggaacagcctaaatcgctaaaa 262 Query: 182 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 241 ||||||| || ||||||| ||| || || |||||| || || || |||| | | | Sbjct: 263 tggggttgggg---agcaataaaagtattttgttgctagacggagtagtggagttctgaa 319 Query: 242 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga-cccgagt 300 |||||||||| | |||||||||| |||| |||| ||||||||||| | | ||||||| Sbjct: 320 ccctagatggtgagagtccagtagtataaagtatcattagcttatgcttttaacccgagt 379 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||| || |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 380 agcatgggacatatggaatcccgtgtgaatcagcaaggaccaccttgaaaggctaaatac 439 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 || ||||||||| |||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 440 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacccccattgg 499 Query: 421 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 480 | |||||| |||||| ||||| | | ||| ||||||||||||||| || || | | Sbjct: 500 ggagtgaactagaacatgaaaac---atatgctaccaagcagtgggaggagacaggg--c 554 Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||||||| |||||| ||||||||||||| |||||||||||| | |||||| ||||||||| Sbjct: 555 tctgaccacgtgcccgttgaagaatgagtcggcgactcataagtagtggcctggttaagg 614 Query: 541 g 541 | Sbjct: 615 g 615
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 323 bits (163), Expect = 3e-85 Identities = 227/248 (91%), Gaps = 3/248 (1%) Strand = Plus / Plus Query: 293 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 352 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 353 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 412 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 413 cccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 472 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 473 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 532 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 614 Query: 533 ggttaagg 540 |||||||| Sbjct: 615 ggttaagg 622 Score = 202 bits (102), Expect = 9e-49 Identities = 153/170 (90%) Strand = Plus / Plus Query: 7 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 66 |||||| ||||||||||| ||| |||||| ||||| || |||||||||||||| || Sbjct: 81 aagcattgatccggagatgcccgaataggggaacctatttgactgcctgctgaattgata 140 Query: 67 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 126 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 gggaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 200 Query: 127 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 176 |||||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct: 201 aaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 323 bits (163), Expect = 3e-85 Identities = 227/248 (91%), Gaps = 3/248 (1%) Strand = Plus / Plus Query: 293 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 352 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 353 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 412 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 413 cccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 472 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 473 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 532 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 627 Query: 533 ggttaagg 540 |||||||| Sbjct: 628 ggttaagg 635 Score = 202 bits (102), Expect = 9e-49 Identities = 153/170 (90%) Strand = Plus / Plus Query: 7 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 66 |||||| ||||||||||| ||| |||||| ||||| || |||||||||||||| || Sbjct: 94 aagcattgatccggagatgcccgaataggggaacctatttgactgcctgctgaattgata 153 Query: 67 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 126 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 gggaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 213 Query: 127 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 176 |||||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct: 214 aaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccgt 263
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 321 bits (162), Expect = 1e-84 Identities = 226/247 (91%), Gaps = 3/247 (1%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 473 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 474 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 533 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctg 732 Query: 534 gttaagg 540 ||||||| Sbjct: 733 gttaagg 739 Score = 200 bits (101), Expect = 3e-48 Identities = 152/169 (89%) Strand = Plus / Plus Query: 7 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 66 |||||| ||||||||||| ||| |||||| ||||| || |||||||||||||| || Sbjct: 198 aagcattgatccggagatgcccgaataggggaacctatttgactgcctgctgaattgata 257 Query: 67 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 126 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 258 gggaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 317 Query: 127 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 175 |||||||||||| ||||| |||||||||||||||| |||||||||||| Sbjct: 318 aaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccg 366
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 303 bits (153), Expect = 3e-79 Identities = 244/273 (89%), Gaps = 5/273 (1%) Strand = Plus / Plus Query: 269 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 328 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 329 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 388 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 389 cgtgagggaaaggtgaaaagaacccccantgggtagtgaaatagaacgtgaaaccgtgct 448 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 449 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 508 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 509 ccggcgactcataggcagtggcttggttaaggg 541 ||||||||||||| | |||||| |||||||||| Sbjct: 608 ccggcgactcataagtagtggcctggttaaggg 640 Score = 133 bits (67), Expect = 7e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 68 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 127 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 128 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 187 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 188 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 247 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 248 a 248 | Sbjct: 325 a 325
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 301 bits (152), Expect = 1e-78 Identities = 285/329 (86%), Gaps = 3/329 (0%) Strand = Plus / Plus Query: 215 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 274 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 275 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 334 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 335 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 394 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 395 ggaaaggtgaaaagaacccccantgggtagtgaaatagaacgtgaaaccgtgctgagctc 454 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 455 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 514 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 515 actcataggcagtggcttggttaagggaa 543 ||| |||||||||||| |||||||||||| Sbjct: 599 acttataggcagtggcgtggttaagggaa 627 Score = 214 bits (108), Expect = 2e-52 Identities = 171/192 (89%) Strand = Plus / Plus Query: 7 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 66 ||||||||||||| ||| ||| |||||| |||||| || ||| | |||||||||||| Sbjct: 94 aagcatagatccgaagacccccgaatagggcaacctcttgtactacttgctgaatccata 153 Query: 67 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 126 ||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 ggcaagaaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 213 Query: 127 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 186 |||||||||||| ||||||||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 214 aaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcgaaagcgggg 273 Query: 187 ttgtgggagagc 198 |||||||||||| Sbjct: 274 ttgtgggagagc 285
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 301 bits (152), Expect = 1e-78 Identities = 183/192 (95%), Gaps = 1/192 (0%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||| ||||||| ||||||||||||||| |||||| ||||||| Sbjct: 79683 gaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaa 79625 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79624 ttcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 79565 Query: 121 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 79564 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaa 79505 Query: 181 acggggttgtgg 192 |||||||||||| Sbjct: 79504 acggggttgtgg 79493
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 301 bits (152), Expect = 1e-78 Identities = 285/329 (86%), Gaps = 3/329 (0%) Strand = Plus / Minus Query: 215 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 274 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 275 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 334 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 335 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 394 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 395 ggaaaggtgaaaagaacccccantgggtagtgaaatagaacgtgaaaccgtgctgagctc 454 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 455 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 514 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 515 actcataggcagtggcttggttaagggaa 543 ||| |||||||||||| |||||||||||| Sbjct: 124666 acttataggcagtggcgtggttaagggaa 124638 Score = 301 bits (152), Expect = 1e-78 Identities = 285/329 (86%), Gaps = 3/329 (0%) Strand = Plus / Plus Query: 215 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 274 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 275 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 334 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 335 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 394 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 395 ggaaaggtgaaaagaacccccantgggtagtgaaatagaacgtgaaaccgtgctgagctc 454 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 455 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 514 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 515 actcataggcagtggcttggttaagggaa 543 ||| |||||||||||| |||||||||||| Sbjct: 95200 acttataggcagtggcgtggttaagggaa 95228 Score = 214 bits (108), Expect = 2e-52 Identities = 171/192 (89%) Strand = Plus / Minus Query: 7 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 66 ||||||||||||| ||| ||| |||||| |||||| || ||| | |||||||||||| Sbjct: 125171 aagcatagatccgaagacccccgaatagggcaacctcttgtactacttgctgaatccata 125112 Query: 67 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 126 ||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125111 ggcaagaaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 125052 Query: 127 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 186 |||||||||||| ||||||||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 125051 aaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcgaaagcgggg 124992 Query: 187 ttgtgggagagc 198 |||||||||||| Sbjct: 124991 ttgtgggagagc 124980 Score = 214 bits (108), Expect = 2e-52 Identities = 171/192 (89%) Strand = Plus / Plus Query: 7 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 66 ||||||||||||| ||| ||| |||||| |||||| || ||| | |||||||||||| Sbjct: 94695 aagcatagatccgaagacccccgaatagggcaacctcttgtactacttgctgaatccata 94754 Query: 67 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 126 ||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94755 ggcaagaaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 94814 Query: 127 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 186 |||||||||||| ||||||||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 94815 aaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcgaaagcgggg 94874 Query: 187 ttgtgggagagc 198 |||||||||||| Sbjct: 94875 ttgtgggagagc 94886
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 295 bits (149), Expect = 8e-77 Identities = 157/160 (98%) Strand = Plus / Minus Query: 388 ccgtgagggaaaggtgaaaagaacccccantgggtagtgaaatagaacgtgaaaccgtgc 447 ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 448 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 507 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 508 gccggcgactcataggcagtggcttggttaagggaacgga 547 |||||||||||||||||||||||||||||||||||||||| Sbjct: 107930 gccggcgactcataggcagtggcttggttaagggaacgga 107891
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 289 bits (146), Expect = 5e-75 Identities = 222/247 (89%), Gaps = 3/247 (1%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 473 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 474 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 533 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 614 Query: 534 gttaagg 540 ||||||| Sbjct: 615 gttaagg 621 Score = 151 bits (76), Expect = 3e-33 Identities = 145/168 (86%) Strand = Plus / Plus Query: 7 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 66 |||||| ||||||||||| ||| |||||| |||||| || |||| | ||||||| || Sbjct: 81 aagcattgatccggagatccccgaatagggcaacctcttgaactctccgctgaataaata 140 Query: 67 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 126 || | ||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 141 ggcggagcagagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagca 200 Query: 127 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 174 |||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 201 aaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 289 bits (146), Expect = 5e-75 Identities = 222/247 (89%), Gaps = 3/247 (1%) Strand = Plus / Minus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 473 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 474 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 533 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 115048 Query: 534 gttaagg 540 ||||||| Sbjct: 115047 gttaagg 115041 Score = 289 bits (146), Expect = 5e-75 Identities = 222/247 (89%), Gaps = 3/247 (1%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 473 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 474 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 533 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 86940 Query: 534 gttaagg 540 ||||||| Sbjct: 86941 gttaagg 86947 Score = 151 bits (76), Expect = 3e-33 Identities = 145/168 (86%) Strand = Plus / Minus Query: 7 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 66 |||||| ||||||||||| ||| |||||| |||||| || |||| | ||||||| || Sbjct: 115582 aagcattgatccggagatccccgaatagggcaacctcttgaactctccgctgaataaata 115523 Query: 67 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 126 || | ||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 115522 ggcggagcagagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagca 115463 Query: 127 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 174 |||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 115462 aaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 151 bits (76), Expect = 3e-33 Identities = 145/168 (86%) Strand = Plus / Plus Query: 7 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 66 |||||| ||||||||||| ||| |||||| |||||| || |||| | ||||||| || Sbjct: 86406 aagcattgatccggagatccccgaatagggcaacctcttgaactctccgctgaataaata 86465 Query: 67 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 126 || | ||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 86466 ggcggagcagagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagca 86525 Query: 127 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 174 |||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 86526 aaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 289 bits (146), Expect = 5e-75 Identities = 222/247 (89%), Gaps = 3/247 (1%) Strand = Plus / Plus Query: 293 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 352 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 353 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 412 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 413 cccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 472 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 473 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 532 | |||||||||||||||||||||||||||||||||||||||| ||| | |||||| | Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcct 573 Query: 533 ggttaag 539 ||||||| Sbjct: 574 ggttaag 580 Score = 168 bits (85), Expect = 1e-38 Identities = 143/161 (88%), Gaps = 1/161 (0%) Strand = Plus / Plus Query: 14 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 73 ||||||||||| ||| |||||| ||||| |||||||| |||||||| || |||| | Sbjct: 56 gatccggagatccccgaatagggtaacctaataaactgc-tgctgaatatataggcagac 114 Query: 74 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 133 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115 gagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 174 Query: 134 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 174 ||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 175 ttccctcagtagtggcgagcgaaatgggaacagcctaaacc 215
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 283 bits (143), Expect = 3e-73 Identities = 194/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 247 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 305 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 306 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 365 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 366 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagt 425 ||||||||||||||| ||||||| ||||||||||||||||||||||||| | |||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 426 gaaatagaacgtgaaaccgtgctgagctcc 455 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 283 bits (143), Expect = 3e-73 Identities = 194/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 247 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 305 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 306 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 365 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 366 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagt 425 ||||||||||||||| ||||||| ||||||||||||||||||||||||| | |||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 426 gaaatagaacgtgaaaccgtgctgagctcc 455 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 283 bits (143), Expect = 3e-73 Identities = 194/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 247 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 305 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 306 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 365 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 366 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagt 425 ||||||||||||||| ||||||| ||||||||||||||||||||||||| | |||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 426 gaaatagaacgtgaaaccgtgctgagctcc 455 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 448 tgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 283 bits (143), Expect = 3e-73 Identities = 194/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 247 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 305 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 306 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 365 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 366 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagt 425 ||||||||||||||| ||||||| ||||||||||||||||||||||||| | |||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 426 gaaatagaacgtgaaaccgtgctgagctcc 455 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 448 tgagctcccaagcagtgggaggggaaagtgatc 480 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 283 bits (143), Expect = 3e-73 Identities = 146/147 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 75853 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgcggaa 75912 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75913 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 75972 Query: 121 aaagcaaaagcgattcccgtagtagcg 147 ||||||||||||||||||||||||||| Sbjct: 75973 aaagcaaaagcgattcccgtagtagcg 75999 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 368 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 414 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 368 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 414 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 ggcgaactgaaacatcttag 105 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 278 bits (140), Expect = 2e-71 Identities = 264/305 (86%), Gaps = 3/305 (0%) Strand = Plus / Plus Query: 239 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 298 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 299 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 358 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 359 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccant 418 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 419 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 478 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606 Query: 479 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 538 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 4666 Query: 539 gggaa 543 ||||| Sbjct: 4667 gggaa 4671 Score = 159 bits (80), Expect = 1e-35 Identities = 144/164 (87%), Gaps = 1/164 (0%) Strand = Plus / Plus Query: 9 gcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgag 68 |||||||||||||||||||| ||| || |||| || |||||| ||||||||||| | Sbjct: 4129 gcatagatccggagattcccgaatggggtaaccccttgtactgcc-gctgaatccatagg 4187 Query: 69 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 128 | | |||||| ||||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct: 4188 cggataagagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaa 4247 Query: 129 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 172 |||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 4248 agcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 278 bits (140), Expect = 2e-71 Identities = 264/305 (86%), Gaps = 3/305 (0%) Strand = Plus / Plus Query: 239 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 298 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 299 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 358 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 359 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccant 418 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 419 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 478 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 479 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 538 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 539 gggaa 543 ||||| Sbjct: 634 gggaa 638 Score = 151 bits (76), Expect = 3e-33 Identities = 143/164 (87%), Gaps = 1/164 (0%) Strand = Plus / Plus Query: 9 gcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgag 68 |||||||||||||||||||| ||| || |||| || |||||| ||||||| ||| | Sbjct: 96 gcatagatccggagattcccgaatggggtaaccccttgtactgcc-gctgaatacatagg 154 Query: 69 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 128 | | |||||| ||||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct: 155 cggataagagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaa 214 Query: 129 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 172 |||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 215 agcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 278 bits (140), Expect = 2e-71 Identities = 264/305 (86%), Gaps = 3/305 (0%) Strand = Plus / Plus Query: 239 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 298 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 299 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 358 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 359 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccant 418 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 419 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 478 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 479 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 538 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 539 gggaa 543 ||||| Sbjct: 634 gggaa 638 Score = 159 bits (80), Expect = 1e-35 Identities = 144/164 (87%), Gaps = 1/164 (0%) Strand = Plus / Plus Query: 9 gcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgag 68 |||||||||||||||||||| ||| || |||| || |||||| ||||||||||| | Sbjct: 96 gcatagatccggagattcccgaatggggtaaccccttgtactgcc-gctgaatccatagg 154 Query: 69 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 128 | | |||||| ||||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct: 155 cggataagagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaa 214 Query: 129 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 172 |||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 215 agcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 268 bits (135), Expect = 2e-68 Identities = 221/247 (89%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 473 || ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 474 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 533 | ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 643 Query: 534 gttaagg 540 ||||||| Sbjct: 644 gttaagg 650 Score = 95.6 bits (48), Expect = 1e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 74 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 133 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 134 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 173 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 268 bits (135), Expect = 2e-68 Identities = 221/247 (89%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 473 || ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 474 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 533 ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 604 Query: 534 gttaagg 540 ||||||| Sbjct: 605 gttaagg 611 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 74 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 133 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 134 ttcccgtagtagcggcgagcgaa 156 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 262 bits (132), Expect = 1e-66 Identities = 223/253 (88%), Gaps = 3/253 (1%) Strand = Plus / Plus Query: 288 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 347 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 348 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 407 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 408 gaacccccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 467 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 468 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagt 527 || || | || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagt 574 Query: 528 ggcttggttaagg 540 ||| ||||||||| Sbjct: 575 ggcctggttaagg 587 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 81 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 140 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 141 agtagcggcgagcgaaatgggagcagcctaaacc 174 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 254 bits (128), Expect = 3e-64 Identities = 225/257 (87%), Gaps = 3/257 (1%) Strand = Plus / Plus Query: 287 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 346 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 347 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 406 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 407 agaacccccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 466 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 467 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 526 || ||| | |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatag 616 Query: 527 tggcttggttaagggaa 543 ||||| ||||||||||| Sbjct: 617 tggctgggttaagggaa 633 Score = 149 bits (75), Expect = 1e-32 Identities = 93/99 (93%) Strand = Plus / Plus Query: 74 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 133 |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 161 aagagacaacctggtgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcga 220 Query: 134 ttcccgtagtagcggcgagcgaaatgggagcagcctaaa 172 || || ||||||||||||||||||||||| |||||||| Sbjct: 221 tttcctgagtagcggcgagcgaaatgggagaagcctaaa 259
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 244 bits (123), Expect = 3e-61 Identities = 217/247 (87%), Gaps = 5/247 (2%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 473 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 474 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 533 ||| | |||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttg 610 Query: 534 gttaagg 540 ||||||| Sbjct: 611 gttaagg 617 Score = 139 bits (70), Expect = 1e-29 Identities = 139/162 (85%) Strand = Plus / Plus Query: 14 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 73 ||||||||||||||| ||| || |||||| ||| |||||||||| ||| ||||| Sbjct: 88 gatccggagattcccgaatggggcaacctcaaggactccctgctgaattcataggcaggg 147 Query: 74 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 133 |||| |||| || |||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 tagaggaaacccggtgaactgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 134 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 175 ||||| |||||||||||||||||| |||| |||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaacgggaccagcctaaaccg 249
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 242 bits (122), Expect = 1e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 473 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 474 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 530 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 628 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 75 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 134 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 135 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 175 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 242 bits (122), Expect = 1e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 473 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 474 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 530 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 2397 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 75 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 134 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 135 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 175 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 4e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 222 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 281 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 282 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 341 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 342 accttgcaaggctaaatactcctgggtgaccga 374 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 238 bits (120), Expect = 2e-59 Identities = 217/249 (87%), Gaps = 3/249 (1%) Strand = Plus / Plus Query: 293 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 352 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 353 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 412 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 413 cccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 472 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 473 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 532 | | |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcct 1020 Query: 533 ggttaaggg 541 ||||||||| Sbjct: 1021 ggttaaggg 1029 Score = 167 bits (84), Expect = 5e-38 Identities = 142/160 (88%), Gaps = 1/160 (0%) Strand = Plus / Plus Query: 17 ccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaag 76 |||||||||||| |||||| |||||| | ||||||| |||||||| ||| || | ||| Sbjct: 505 ccggagattcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaag 563 Query: 77 agacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattc 136 ||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 564 agacaacctggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattc 623 Query: 137 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 176 || |||||| ||||||||||| |||| ||||||||||||| Sbjct: 624 ccttagtagtggcgagcgaaacgggaacagcctaaaccgt 663
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 234 bits (118), Expect = 2e-58 Identities = 180/201 (89%) Strand = Plus / Plus Query: 241 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 300 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 301 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 360 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 361 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgg 420 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 421 gtagtgaaatagaacgtgaaa 441 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 143 bits (72), Expect = 7e-31 Identities = 162/188 (86%), Gaps = 3/188 (1%) Strand = Plus / Plus Query: 2 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 61 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| | | Sbjct: 87 aaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgcttatt 145 Query: 62 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 121 ||||| |||| ||| ||| ||||||| |||||||| ||||||||||| |||||||||| | Sbjct: 146 ccatg-gcagacaaaaga-aacctggtgaactgaatcatcttagtagacagaggaaaata 203 Query: 122 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 181 ||||||||| ||| || |||||| |||||| |||| |||| |||||||||||| |||| Sbjct: 204 aagcaaaagttattaccatagtagtggcgagtgaaaagggaacagcctaaaccgctaaaa 263 Query: 182 cggggttg 189 ||||||| Sbjct: 264 tggggttg 271 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 540 gg 541 || Sbjct: 626 gg 627
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 232 bits (117), Expect = 1e-57 Identities = 218/249 (87%), Gaps = 6/249 (2%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 412 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 413 cccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 472 || ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 473 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 532 | | |||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggctt 589 Query: 533 ggttaaggg 541 ||||||||| Sbjct: 590 ggttaaggg 598 Score = 123 bits (62), Expect = 6e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 80 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 139 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 140 tagtagcggcgagcgaaatgggagcagcctaaac 173 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 232 bits (117), Expect = 1e-57 Identities = 214/246 (86%), Gaps = 3/246 (1%) Strand = Plus / Plus Query: 298 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 357 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 358 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccan 417 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 418 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 477 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattga 561 Query: 478 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 537 | || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggtta 621 Query: 538 agggaa 543 |||||| Sbjct: 622 agggaa 627 Score = 151 bits (76), Expect = 3e-33 Identities = 109/120 (90%) Strand = Plus / Plus Query: 75 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 134 ||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 162 agagaaaacctagtgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgat 221 Query: 135 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 194 |||| ||||| ||||||||||| |||| |||||||||||| |||| ||||||||||||| Sbjct: 222 tccctcagtagtggcgagcgaaacgggaacagcctaaaccgcgaaagcggggttgtggga 281
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 220 bits (111), Expect = 4e-54 Identities = 167/186 (89%) Strand = Plus / Plus Query: 256 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 315 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 316 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 375 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 376 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaatagaac 435 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 436 gtgaaa 441 ||||| Sbjct: 504 atgaaa 509 Score = 131 bits (66), Expect = 3e-27 Identities = 147/170 (86%), Gaps = 3/170 (1%) Strand = Plus / Plus Query: 2 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 61 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| | | Sbjct: 88 aaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgcttatt 146 Query: 62 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 121 ||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| | Sbjct: 147 ccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaata 204 Query: 122 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 171 ||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 205 aagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 540 gg 541 || Sbjct: 602 gg 603
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 220 bits (111), Expect = 4e-54 Identities = 167/186 (89%) Strand = Plus / Plus Query: 256 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 315 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 316 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 375 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 376 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaatagaac 435 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 436 gtgaaa 441 ||||| Sbjct: 503 atgaaa 508 Score = 131 bits (66), Expect = 3e-27 Identities = 147/170 (86%), Gaps = 3/170 (1%) Strand = Plus / Plus Query: 2 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 61 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| | | Sbjct: 88 aaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgcttatt 146 Query: 62 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 121 ||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| | Sbjct: 147 ccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaata 204 Query: 122 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 171 ||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 205 aagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 540 gg 541 || Sbjct: 601 gg 602
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 220 bits (111), Expect = 4e-54 Identities = 167/186 (89%) Strand = Plus / Plus Query: 256 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 315 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 316 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 375 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 376 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaatagaac 435 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 436 gtgaaa 441 ||||| Sbjct: 504 atgaaa 509 Score = 131 bits (66), Expect = 3e-27 Identities = 147/170 (86%), Gaps = 3/170 (1%) Strand = Plus / Plus Query: 2 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 61 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| | | Sbjct: 88 aaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgcttatt 146 Query: 62 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 121 ||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| | Sbjct: 147 ccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaata 204 Query: 122 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 171 ||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 205 aagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 540 gg 541 || Sbjct: 602 gg 603
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 220 bits (111), Expect = 4e-54 Identities = 167/186 (89%) Strand = Plus / Plus Query: 256 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 315 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 316 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 375 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 376 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaatagaac 435 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 436 gtgaaa 441 ||||| Sbjct: 504 atgaaa 509 Score = 131 bits (66), Expect = 3e-27 Identities = 147/170 (86%), Gaps = 3/170 (1%) Strand = Plus / Plus Query: 2 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 61 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| | | Sbjct: 88 aaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgcttatt 146 Query: 62 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 121 ||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| | Sbjct: 147 ccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaata 204 Query: 122 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 171 ||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 205 aagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 540 gg 541 || Sbjct: 602 gg 603
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 220 bits (111), Expect = 4e-54 Identities = 167/186 (89%) Strand = Plus / Plus Query: 256 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 315 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 316 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 375 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 376 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaatagaac 435 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 436 gtgaaa 441 ||||| Sbjct: 504 atgaaa 509 Score = 131 bits (66), Expect = 3e-27 Identities = 147/170 (86%), Gaps = 3/170 (1%) Strand = Plus / Plus Query: 2 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 61 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| | | Sbjct: 88 aaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgcttatt 146 Query: 62 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 121 ||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| | Sbjct: 147 ccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaata 204 Query: 122 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 171 ||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 205 aagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 540 gg 541 || Sbjct: 602 gg 603
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 220 bits (111), Expect = 4e-54 Identities = 167/186 (89%) Strand = Plus / Plus Query: 256 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 315 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 316 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 375 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 376 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaatagaac 435 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 436 gtgaaa 441 ||||| Sbjct: 504 atgaaa 509 Score = 131 bits (66), Expect = 3e-27 Identities = 141/162 (87%), Gaps = 3/162 (1%) Strand = Plus / Plus Query: 2 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 61 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| | | Sbjct: 88 aaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgcttatt 146 Query: 62 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 121 ||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| | Sbjct: 147 ccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaata 204 Query: 122 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 163 ||||||||| |||||| |||||| ||||| ||||| ||||| Sbjct: 205 aagcaaaagttattcccatagtagtggcgaacgaaaagggag 246 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 540 gg 541 || Sbjct: 602 gg 603
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 220 bits (111), Expect = 4e-54 Identities = 167/186 (89%) Strand = Plus / Plus Query: 256 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 315 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 316 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 375 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 376 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaatagaac 435 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 436 gtgaaa 441 ||||| Sbjct: 503 atgaaa 508 Score = 131 bits (66), Expect = 3e-27 Identities = 147/170 (86%), Gaps = 3/170 (1%) Strand = Plus / Plus Query: 2 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 61 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| | | Sbjct: 88 aaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgcttatt 146 Query: 62 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 121 ||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| | Sbjct: 147 ccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaata 204 Query: 122 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 171 ||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 205 aagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 540 gg 541 || Sbjct: 601 gg 602
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 220 bits (111), Expect = 4e-54 Identities = 167/186 (89%) Strand = Plus / Plus Query: 256 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 315 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 316 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 375 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 376 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaatagaac 435 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 436 gtgaaa 441 ||||| Sbjct: 504 atgaaa 509 Score = 131 bits (66), Expect = 3e-27 Identities = 147/170 (86%), Gaps = 3/170 (1%) Strand = Plus / Plus Query: 2 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 61 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| | | Sbjct: 88 aaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgcttatt 146 Query: 62 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 121 ||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| | Sbjct: 147 ccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaata 204 Query: 122 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 171 ||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 205 aagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 540 gg 541 || Sbjct: 602 gg 603
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 220 bits (111), Expect = 4e-54 Identities = 167/186 (89%) Strand = Plus / Plus Query: 256 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 315 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 316 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 375 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 376 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaatagaac 435 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 436 gtgaaa 441 ||||| Sbjct: 504 atgaaa 509 Score = 131 bits (66), Expect = 3e-27 Identities = 147/170 (86%), Gaps = 3/170 (1%) Strand = Plus / Plus Query: 2 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 61 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| | | Sbjct: 88 aaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgcttatt 146 Query: 62 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 121 ||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| | Sbjct: 147 ccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaata 204 Query: 122 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 171 ||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 205 aagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 540 gg 541 || Sbjct: 602 gg 603
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 220 bits (111), Expect = 4e-54 Identities = 167/186 (89%) Strand = Plus / Plus Query: 256 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 315 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 316 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 375 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 376 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaatagaac 435 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 436 gtgaaa 441 ||||| Sbjct: 504 atgaaa 509 Score = 131 bits (66), Expect = 3e-27 Identities = 147/170 (86%), Gaps = 3/170 (1%) Strand = Plus / Plus Query: 2 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 61 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| | | Sbjct: 88 aaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgcttatt 146 Query: 62 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 121 ||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| | Sbjct: 147 ccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaata 204 Query: 122 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 171 ||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 205 aagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 540 gg 541 || Sbjct: 602 gg 603
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 220 bits (111), Expect = 4e-54 Identities = 167/186 (89%) Strand = Plus / Plus Query: 256 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 315 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 316 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 375 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 376 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaatagaac 435 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 436 gtgaaa 441 ||||| Sbjct: 504 atgaaa 509 Score = 139 bits (70), Expect = 1e-29 Identities = 148/170 (87%), Gaps = 3/170 (1%) Strand = Plus / Plus Query: 2 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 61 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| | | Sbjct: 88 aaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgcttatt 146 Query: 62 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 121 ||||| | || ||||||| |||| |||||||||||||||||||||| ||||||||||| | Sbjct: 147 ccatg-gaagacaagaga-aacccggcgaactgaaacatcttagtatccagaggaaaata 204 Query: 122 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 171 ||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 205 aagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 540 gg 541 || Sbjct: 602 gg 603
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 220 bits (111), Expect = 4e-54 Identities = 167/186 (89%) Strand = Plus / Plus Query: 256 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 315 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 316 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 375 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 376 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaatagaac 435 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 436 gtgaaa 441 ||||| Sbjct: 504 atgaaa 509 Score = 131 bits (66), Expect = 3e-27 Identities = 147/170 (86%), Gaps = 3/170 (1%) Strand = Plus / Plus Query: 2 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 61 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| | | Sbjct: 88 aaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgcttatt 146 Query: 62 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 121 ||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| | Sbjct: 147 ccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaata 204 Query: 122 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 171 ||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 205 aagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 540 gg 541 || Sbjct: 602 gg 603
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 220 bits (111), Expect = 4e-54 Identities = 167/186 (89%) Strand = Plus / Plus Query: 256 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 315 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 316 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 375 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 376 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaatagaac 435 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 436 gtgaaa 441 ||||| Sbjct: 504 atgaaa 509 Score = 131 bits (66), Expect = 3e-27 Identities = 147/170 (86%), Gaps = 3/170 (1%) Strand = Plus / Plus Query: 2 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 61 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| | | Sbjct: 88 aaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgcttatt 146 Query: 62 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 121 ||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| | Sbjct: 147 ccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaata 204 Query: 122 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 171 ||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 205 aagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 540 gg 541 || Sbjct: 602 gg 603
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 220 bits (111), Expect = 4e-54 Identities = 167/186 (89%) Strand = Plus / Plus Query: 256 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 315 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 316 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 375 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 376 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaatagaac 435 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 436 gtgaaa 441 ||||| Sbjct: 504 atgaaa 509 Score = 131 bits (66), Expect = 3e-27 Identities = 147/170 (86%), Gaps = 3/170 (1%) Strand = Plus / Plus Query: 2 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 61 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| | | Sbjct: 88 aaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgcttatt 146 Query: 62 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 121 ||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| | Sbjct: 147 ccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaata 204 Query: 122 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 171 ||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 205 aagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 540 gg 541 || Sbjct: 602 gg 603
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 220 bits (111), Expect = 4e-54 Identities = 167/186 (89%) Strand = Plus / Plus Query: 256 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 315 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 316 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 375 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 376 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaatagaac 435 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 436 gtgaaa 441 ||||| Sbjct: 504 atgaaa 509 Score = 131 bits (66), Expect = 3e-27 Identities = 147/170 (86%), Gaps = 3/170 (1%) Strand = Plus / Plus Query: 2 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 61 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| | | Sbjct: 88 aaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgcttatt 146 Query: 62 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 121 ||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| | Sbjct: 147 ccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaata 204 Query: 122 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 171 ||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 205 aagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 540 gg 541 || Sbjct: 602 gg 603
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 220 bits (111), Expect = 4e-54 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 471 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 472 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 531 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 532 tggttaagg 540 ||||||||| Sbjct: 621 tggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 89 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 148 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 149 cgagcgaaatgggagcagcctaaacc 174 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 220 bits (111), Expect = 4e-54 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 471 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 472 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 531 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 532 tggttaagg 540 ||||||||| Sbjct: 621 tggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 89 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 148 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 149 cgagcgaaatgggagcagcctaaacc 174 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 216 bits (109), Expect = 6e-53 Identities = 206/237 (86%), Gaps = 5/237 (2%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 473 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 474 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 530 ||| ||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggc 748 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 74 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 133 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 134 ttcccgtagtagcggcgagcgaaatggga 162 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 214 bits (108), Expect = 2e-52 Identities = 140/151 (92%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 414 ccantgggtagtgaaatagaacgtgaaaccg 444 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 137 bits (69), Expect = 4e-29 Identities = 96/105 (91%) Strand = Plus / Plus Query: 70 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 129 |||||||||| |||| || |||||||||||||| ||||||| ||||||||||||||||| Sbjct: 136 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaac 195 Query: 130 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 174 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 196 gcgattcccatagtagcggcgagcgaaaagggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 482 ctgaccgcgtgcctgttgaagaatgagccggcgact 517 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 212 bits (107), Expect = 9e-52 Identities = 166/186 (89%) Strand = Plus / Plus Query: 256 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 315 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 316 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 375 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 376 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccantgggtagtgaaatagaac 435 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 436 gtgaaa 441 ||||| Sbjct: 504 atgaaa 509 Score = 131 bits (66), Expect = 3e-27 Identities = 141/162 (87%), Gaps = 3/162 (1%) Strand = Plus / Plus Query: 2 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 61 ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| | | Sbjct: 88 aaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgcttatt 146 Query: 62 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 121 ||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||||| | Sbjct: 147 ccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaaaata 204 Query: 122 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 163 ||||||||| |||||| |||||| ||||| ||||| ||||| Sbjct: 205 aagcaaaagttattcccatagtagtggcgaacgaaaagggag 246 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 480 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 540 gg 541 || Sbjct: 602 gg 603
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 208 bits (105), Expect = 1e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgt 445 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 70 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 129 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 130 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 174 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 482 ctgaccgcgtgcctgttgaagaatgagccggcgact 517 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 208 bits (105), Expect = 1e-50 Identities = 207/238 (86%), Gaps = 10/238 (4%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 414 ccantgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 471 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 472 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 529 | | || | |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 665 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 89 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 148 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 149 cgagcgaaatgggagcagcctaaacc 174 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 204 bits (103), Expect = 2e-49 Identities = 135/146 (92%) Strand = Plus / Plus Query: 298 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 357 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 358 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccan 417 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 418 tgggtagtgaaatagaacgtgaaacc 443 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 135 bits (68), Expect = 2e-28 Identities = 107/120 (89%) Strand = Plus / Plus Query: 75 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 134 ||||| ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 1929 agagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgat 1988 Query: 135 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 194 |||| |||||| ||||||||||| |||| | ||||||||||| ||| ||||||||||||| Sbjct: 1989 tcccttagtagtggcgagcgaaacgggaaccgcctaaaccgttaaagcggggttgtggga 2048
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 202 bits (102), Expect = 9e-49 Identities = 140/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgt 445 || || ||||||||||||| ||||||||| Sbjct: 529 ccgtagg--agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 6e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 93 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 152 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 153 cgaaatgggagcagcctaaacc 174 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 530 ||||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 634
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 9e-49 Identities = 117/122 (95%) Strand = Plus / Plus Query: 293 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 352 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 353 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 412 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 413 cc 414 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 72 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 132 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 175 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 484 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 200 bits (101), Expect = 3e-48 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 354 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 412 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 413 cccantgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 470 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 471 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 530 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 531 tt 532 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 93 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 152 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 153 cgaa 156 |||| Sbjct: 238 cgaa 241
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 200 bits (101), Expect = 3e-48 Identities = 139/152 (91%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgt 445 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 93 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 152 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 153 cgaaatgggagcagcctaaacc 174 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 482 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 530 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 200 bits (101), Expect = 3e-48 Identities = 139/152 (91%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgt 445 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 6e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 89 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 148 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 149 cgagcgaaatgggagcagcctaaac 173 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 483 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 531 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 14 gatccggagattcccaaataggtcaacct 42 |||||| ||||||||||||||| |||||| Sbjct: 99 gatccgaagattcccaaatagggcaacct 127
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 200 bits (101), Expect = 3e-48 Identities = 139/152 (91%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgt 445 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 89 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 148 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 149 cgagcgaaatgggagcagcctaaacc 174 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 483 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 14 gatccggagattcccaaataggtcaacct 42 ||||||||||||||| |||||| |||||| Sbjct: 99 gatccggagattcccgaatagggcaacct 127
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 200 bits (101), Expect = 3e-48 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 354 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 412 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 413 cccantgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 470 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 471 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 530 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 616 Query: 531 tt 532 || Sbjct: 617 tt 618 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 93 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 152 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 153 cgaa 156 |||| Sbjct: 219 cgaa 222
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 200 bits (101), Expect = 3e-48 Identities = 139/152 (91%) Strand = Plus / Minus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgt 445 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 200 bits (101), Expect = 3e-48 Identities = 139/152 (91%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgt 445 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 89 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 148 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 149 cgagcgaaatgggagcagcctaaacc 174 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 89 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 148 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 149 cgagcgaaatgggagcagcctaaacc 174 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 483 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 151749 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 483 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 42454
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 200 bits (101), Expect = 3e-48 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 354 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 412 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 413 cccantgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 470 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 471 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 530 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 531 tt 532 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 93 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 152 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 153 cgaa 156 |||| Sbjct: 238 cgaa 241
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 200 bits (101), Expect = 3e-48 Identities = 139/152 (91%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgt 445 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 89 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 148 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 149 cgagcgaaatgggagcagcctaaacc 174 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 483 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 14 gatccggagattcccaaataggtcaacct 42 ||||||||||||||| |||||| |||||| Sbjct: 99 gatccggagattcccgaatagggcaacct 127
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 200 bits (101), Expect = 3e-48 Identities = 139/152 (91%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgt 445 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 6e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 89 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 148 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 149 cgagcgaaatgggagcagcctaaac 173 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 483 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 531 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 14 gatccggagattcccaaataggtcaacct 42 |||||| ||||||||||||||| |||||| Sbjct: 99 gatccgaagattcccaaatagggcaacct 127
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 200 bits (101), Expect = 3e-48 Identities = 139/152 (91%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgt 445 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 89 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 148 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 149 cgagcgaaatgggagcagcctaaacc 174 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 483 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 626
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 200 bits (101), Expect = 3e-48 Identities = 139/152 (91%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgt 445 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 89 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 148 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 149 cgagcgaaatgggagcagcctaaacc 174 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 483 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 711
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 198 bits (100), Expect = 1e-47 Identities = 197/229 (86%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 297 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 356 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 357 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 416 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 417 ntgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 476 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 477 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 525 | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 198 bits (100), Expect = 1e-47 Identities = 215/248 (86%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 412 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 413 cccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 472 ||| || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 cccgtagg--agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 473 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 532 ||| | |||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgacttataagaagtggcca 674 Query: 533 ggttaagg 540 |||||||| Sbjct: 675 ggttaagg 682 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 74 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 133 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 134 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 175 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 196 bits (99), Expect = 5e-47 Identities = 137/150 (91%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 414 ccantgggtagtgaaatagaacgtgaaacc 443 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 9e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 89 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 148 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 149 cgagcgaaatgggagcagcctaaacc 174 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 482 ctgaccgcgtgcctgttgaagaatgagccggcgact 517 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 14 gatccggagattcccaaataggtcaacct 42 ||||||||||||||| |||||| |||||| Sbjct: 80 gatccggagattcccgaatagggcaacct 108
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 196 bits (99), Expect = 5e-47 Identities = 134/146 (91%) Strand = Plus / Plus Query: 298 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 357 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 358 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccan 417 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 418 tgggtagtgaaatagaacgtgaaacc 443 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 163 bits (82), Expect = 7e-37 Identities = 160/186 (86%) Strand = Plus / Plus Query: 11 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 70 ||||||||| |||||||| |||||| |||||| || ||| |||| ||| ||| | || Sbjct: 98 atagatccgaagattcccgaatagggcaacctcttgtactacctgtaaaatacataatca 157 Query: 71 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 130 || ||||| ||||| | ||||||||||||||||||||| ||||||| | |||||||||| Sbjct: 158 ggttagagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaag 217 Query: 131 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 190 |||||||| |||||| ||||||||||| |||| ||||||||||||||||| ||||||||| Sbjct: 218 cgattcccttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgt 277 Query: 191 gggaga 196 |||||| Sbjct: 278 gggaga 283 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Plus Query: 483 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 542 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 543 a 543 | Sbjct: 627 a 627
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 196 bits (99), Expect = 5e-47 Identities = 134/146 (91%) Strand = Plus / Plus Query: 298 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 357 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 358 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccan 417 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 418 tgggtagtgaaatagaacgtgaaacc 443 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 155 bits (78), Expect = 2e-34 Identities = 111/122 (90%) Strand = Plus / Plus Query: 75 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 134 ||||| ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 3196 agagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgat 3255 Query: 135 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 194 |||| |||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||| Sbjct: 3256 tcccttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtggga 3315 Query: 195 ga 196 || Sbjct: 3316 ga 3317 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Plus Query: 483 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 542 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 543 a 543 | Sbjct: 3661 a 3661
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 196 bits (99), Expect = 5e-47 Identities = 137/150 (91%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 414 ccantgggtagtgaaatagaacgtgaaacc 443 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 89 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 148 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 149 cgagcgaaatgggagcagcctaaacc 174 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 482 ctgaccgcgtgcctgttgaagaatgagccggcgact 517 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 14 gatccggagattcccaaataggtcaacct 42 ||||||||||||||| |||||| |||||| Sbjct: 24889 gatccggagattcccgaatagggcaacct 24917
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 194 bits (98), Expect = 2e-46 Identities = 213/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Minus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 412 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 413 cccant-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 471 ||| | ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 472 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 531 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 155604 Query: 532 tggttaagg 540 |||||||| Sbjct: 155603 gggttaagg 155595 Score = 194 bits (98), Expect = 2e-46 Identities = 213/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 412 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 413 cccant-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 471 ||| | ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 472 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 531 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 78288 Query: 532 tggttaagg 540 |||||||| Sbjct: 78289 gggttaagg 78297 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 74 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 133 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 134 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 174 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 74 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 133 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 134 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 174 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 194 bits (98), Expect = 2e-46 Identities = 139/152 (91%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgt 445 || || ||||||||||||| ||||||||| Sbjct: 532 ccgtagg--agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 6e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 93 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 152 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 153 cgaaatgggagcagcctaaacc 174 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 75.8 bits (38), Expect = 1e-10 Identities = 54/58 (93%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 482 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 538 |||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggcattggttaa 650
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 192 bits (97), Expect = 8e-46 Identities = 138/152 (90%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgt 445 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 89 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 148 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 149 cgagcgaaatgggagcagcctaaacc 174 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 483 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 14 gatccggagattcccaaataggtcaacct 42 ||||||||||||||| |||||| |||||| Sbjct: 81 gatccggagattcccgaatagggcaacct 109
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 192 bits (97), Expect = 8e-46 Identities = 213/248 (85%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 473 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 474 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 532 ||| | || ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaa 799 Query: 533 ggttaagg 540 |||||||| Sbjct: 800 ggttaagg 807 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 75 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 134 |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 199 Query: 135 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 174 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 200 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 192 bits (97), Expect = 8e-46 Identities = 138/152 (90%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgt 445 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 89 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 148 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 149 cgagcgaaatgggagcagcctaaacc 174 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 483 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 541 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 190 bits (96), Expect = 3e-45 Identities = 99/100 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 19434019 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 19433960 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacat 100 |||||||||||||||||||||||||||||||||||||||| Sbjct: 19433959 tccatgagcaggcaagagacaacctggcgaactgaaacat 19433920 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 468 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 509 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12182494 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 12182453 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 386 taccgtgagggaaaggtgaaaagaacc 412 |||||||||||||||||||||| |||| Sbjct: 14553517 taccgtgagggaaaggtgaaaataacc 14553543
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 190 bits (96), Expect = 3e-45 Identities = 99/100 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 51546 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 51487 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacat 100 |||||||||||||||||||||||||||||||||||||||| Sbjct: 51486 tccatgagcaggcaagagacaacctggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 190 bits (96), Expect = 3e-45 Identities = 99/100 (99%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 119510 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 119451 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacat 100 |||||||||||||||||||||||||||||||||||||||| Sbjct: 119450 tccatgagcaggcaagagacaacctggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 190 bits (96), Expect = 3e-45 Identities = 99/100 (99%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 6112 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 6171 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacat 100 |||||||||||||||||||||||||||||||||||||||| Sbjct: 6172 tccatgagcaggcaagagacaacctggcgaactgaaacat 6211
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 188 bits (95), Expect = 1e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 469 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 188 bits (95), Expect = 1e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 469 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 75 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 134 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 135 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 175 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 75 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 134 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 135 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 175 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 482 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 170883 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 482 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 122043 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 14 gatccggagattcccaaataggtcaacct 42 ||||||||||||||| |||||| |||||| Sbjct: 171418 gatccggagattcccgaatagggcaacct 171390 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 14 gatccggagattcccaaataggtcaacct 42 ||||||||||||||| |||||| |||||| Sbjct: 121508 gatccggagattcccgaatagggcaacct 121536
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 188 bits (95), Expect = 1e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 469 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 75 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 134 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 135 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 175 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 482 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 634 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 14 gatccggagattcccaaataggtcaacct 42 ||||||||||||||| |||||| |||||| Sbjct: 99 gatccggagattcccgaatagggcaacct 127
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 188 bits (95), Expect = 1e-44 Identities = 106/110 (96%) Strand = Plus / Minus Query: 402 tgaaaagaacccccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 461 ||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 462 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 511 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 186 bits (94), Expect = 5e-44 Identities = 135/149 (90%) Strand = Plus / Plus Query: 297 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 356 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 357 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 416 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 417 ntgggtagtgaaatagaacgtgaaaccgt 445 ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 490 gtgcctgttgaagaatgagccggcgactcatagg 523 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 186 bits (94), Expect = 5e-44 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 412 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 413 cccantgggtagtgaaatagaacgtgaaaccgt 445 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 131 bits (66), Expect = 3e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 74 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 133 |||||| |||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagagataacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 134 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 175 ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatgggaacagcctaaaccg 249 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 482 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagg 687
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 186 bits (94), Expect = 5e-44 Identities = 195/225 (86%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 412 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 413 cccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 472 ||| | || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 473 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 517 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 74 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 133 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 134 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 175 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 186 bits (94), Expect = 5e-44 Identities = 97/98 (98%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1632 gaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaa 1691 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaac 98 |||||||||||||||||||||||||||||||||||||| Sbjct: 1692 tccatgagcaggcaagagacaacctggcgaactgaaac 1729
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 184 bits (93), Expect = 2e-43 Identities = 203/234 (86%), Gaps = 12/234 (5%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 412 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 413 ccc-antgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 469 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 470 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 523 | ||| || |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 608 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Plus Query: 87 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 146 ||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 155 gcgaattgaaacatcttagtagctgaaggaaaagaaagcaaaagcgattcccaaagtagc 214 Query: 147 ggcgagcgaaatgggagcagcctaaac 173 |||||||| ||||||| |||||||||| Sbjct: 215 ggcgagcggaatgggaacagcctaaac 241
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 184 bits (93), Expect = 2e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgt 445 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 147 bits (74), Expect = 4e-32 Identities = 140/162 (86%) Strand = Plus / Plus Query: 14 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 73 |||||| |||||||| |||||| ||||||| || ||| |||| ||||| ||| |||| Sbjct: 88 gatccgaagattcccgaatagggcaaccttatatacttcctgttgaattcatagacaggt 147 Query: 74 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 133 ||||||||||| |||||| |||||||||||||||||| | ||||||||||||||| |||| Sbjct: 148 aagagacaacccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcga 207 Query: 134 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 175 ||||| |||||| ||||||||||| |||| ||| |||||||| Sbjct: 208 ttcccttagtagtggcgagcgaaaagggatcagtctaaaccg 249 Score = 111 bits (56), Expect = 2e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 182 bits (92), Expect = 8e-43 Identities = 120/128 (93%), Gaps = 1/128 (0%) Strand = Plus / Minus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| |||||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 89794 gaaaataagcgtagatccggagattccggaataggttaaccttttgaactgc-tgctgaa 89736 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 89735 tccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccagaggaaaag 89676 Query: 121 aaagcaaa 128 |||||||| Sbjct: 89675 aaagcaaa 89668 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 368 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 120438 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 120483
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 182 bits (92), Expect = 8e-43 Identities = 120/128 (93%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 1 gaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaa 60 |||||||||| |||||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 476 gaaaataagcgtagatccggagattccggaataggttaaccttttgaactgc-tgctgaa 534 Query: 61 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 120 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 535 tccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccagaggaaaag 594 Query: 121 aaagcaaa 128 |||||||| Sbjct: 595 aaagcaaa 602 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 368 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 42056 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 42101
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 180 bits (91), Expect = 3e-42 Identities = 135/150 (90%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 414 ccantgggtagtgaaatagaacgtgaaacc 443 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 482 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 89 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 148 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 174 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 233 Query: 149 cgagcgaaatgggagcagcctaaacc 174 ||| |||| |||| |||||||||| Sbjct: 234 cgaacgaaccgggattagcctaaacc 259
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 180 bits (91), Expect = 3e-42 Identities = 135/150 (90%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 414 ccantgggtagtgaaatagaacgtgaaacc 443 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 89 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 148 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 149 cgagcgaaatgggagcagcctaaacc 174 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 482 ctgaccgcgtgcctgttgaagaatgagccggcgact 517 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 180 bits (91), Expect = 3e-42 Identities = 135/150 (90%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 414 ccantgggtagtgaaatagaacgtgaaacc 443 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 482 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 89 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 148 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 174 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 233 Query: 149 cgagcgaaatgggagcagcctaaacc 174 ||| |||| |||| |||||||||| Sbjct: 234 cgaacgaaccgggattagcctaaacc 259
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 180 bits (91), Expect = 3e-42 Identities = 210/246 (85%), Gaps = 8/246 (3%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||| |||||||||| |||||||||||||| ||| |||||||||| | ||||| Sbjct: 498 cccgagtagctaggggcacgtgaaatcccgtgtgaatgagcgaggaccacctcgtaaggc 557 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 ||||||||||| |||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 558 taaatactcctaggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 617 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-ga 472 | ||| ||||||| ||||| |||||||| | |||| ||||||||||||||| || Sbjct: 618 ctgtaggggagtgaaacagaacatgaaaccg---taagctgtcaagcagtgggagggcga 674 Query: 473 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 532 || | | |||||||||||||||||||||||||||||||||||| ||||| |||||| | Sbjct: 675 aa---agc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcgt 730 Query: 533 ggttaa 538 |||||| Sbjct: 731 ggttaa 736 Score = 105 bits (53), Expect = 2e-19 Identities = 132/157 (84%), Gaps = 1/157 (0%) Strand = Plus / Plus Query: 18 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 77 ||||||||||| |||||| |||||||||| ||| ||| ||||| ||| ||| |||| Sbjct: 205 cggagattcccgaatagggcaaccttttatactacctattgaattcatagataggaaaga 264 Query: 78 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 137 ||||||| | ||| |||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 265 gacaacccagtgaag-gaaacatcttagtagctggaggaaaagaaagcaaacgcgattcc 323 Query: 138 cgtagtagcggcgagcgaaatgggagcagcctaaacc 174 | ||||||||||||||||||| | ||||||||||| Sbjct: 324 cttagtagcggcgagcgaaatcccaacagcctaaacc 360
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 178 bits (90), Expect = 1e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 297 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 356 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 357 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 416 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 417 ntgggtagtgaaatagaacgtgaaaccgt 445 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 481 tctgaccgcgtgcctgttgaagaatgagccggcga 515 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L42990.1|CRECPRGOLD Chlamydomonas nivalis chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3403 Score = 176 bits (89), Expect = 5e-41 Identities = 136/152 (89%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 584 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 643 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||| ||||||||||||||||| ||| ||||||| ||||||||||||||||| |||| Sbjct: 644 taaatattcctgggtgaccgatagtgaaatagtaccacgagggaaaggtgaaaagtaccc 703 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgt 445 | ||| ||||||||||||| ||||||||| Sbjct: 704 ctgtgggggagtgaaatagaacatgaaaccgt 735 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Plus Query: 75 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 134 |||||||||| | |||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 141 agagacaacccagtgaactgaaacatctaagtagctggaggaaaagaaagcaaaagcgat 200 Query: 135 tcccgtagtagcggcgagcgaaatgggagcagcctaaa 172 ||||||||||| |||||||||| |||| ||||||||| Sbjct: 201 tcccgtagtagtggcgagcgaaccgggaacagcctaaa 238 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 483 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 529 |||||||||||||||||||||||||||| |||||| ||||| ||||| Sbjct: 769 tgaccgcgtgcctgttgaagaatgagcctgcgacttataggaagtgg 815
>gb|L44124.1|MNXCPRGOL Monomastix sp. (M722) chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5001 Score = 176 bits (89), Expect = 5e-41 Identities = 136/152 (89%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 381 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 440 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 441 taaatactcttgggtgaccgatagcgaaacagtaccgtgagggaaaggtgaaaagaacct 500 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgt 445 | ||| ||||||||||| | ||||||||| Sbjct: 501 catcaggggagtgaaatagaccatgaaaccgt 532 Score = 123 bits (62), Expect = 6e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 75 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 134 |||||||||| | ||| ||||||||||||||||| |||||| |||||||||||||||| Sbjct: 149 agagacaaccgagtgaattgaaacatcttagtagctcgaggaagagaaagcaaaagcgat 208 Query: 135 tcccgtagtagcggcgagcgaaatgggagcagcctaaa 172 ||||| |||||||||||||||||||||| ||||||||| Sbjct: 209 tcccggagtagcggcgagcgaaatgggaacagcctaaa 246 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 483 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 539 |||||| |||||||||||||||||||| ||||||| ||||| || |||||||||||| Sbjct: 565 tgaccgtgtgcctgttgaagaatgagctggcgacttatagggagaggcttggttaag 621
>gb|L43504.1|CRECPRRNLM Chlamydomonas starrii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3455 Score = 176 bits (89), Expect = 5e-41 Identities = 136/152 (89%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 624 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 683 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 684 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 743 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgt 445 | || ||||||||||||| ||||||||| Sbjct: 744 ttgttagggagtgaaatagaacatgaaaccgt 775 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 89 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 148 |||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaatagaaagcaaacgcgattcccgtagtagcgg 234 Query: 149 cgagcgaaatgggagcagcctaaacc 174 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 483 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 530 ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 808 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 855 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Plus Query: 7 aagcatagatccggagattcccaaataggtcaacct 42 |||||| ||||||||||||||| |||||| |||||| Sbjct: 92 aagcattgatccggagattcccgaatagggcaacct 127
>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CpaI, site-specific DNA endonuclease I-CpaIII, site-specific DNA endonuclease I-CpaIV, site-specific DNA endonuclease I-CpaV genes Length = 8217 Score = 176 bits (89), Expect = 5e-41 Identities = 136/152 (89%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 517 cccgagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 576 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| ||||||||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 577 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaatggtgaaaagaaccc 636 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgt 445 | ||| ||||||||||||| ||||||||| Sbjct: 637 ctgtgggggagtgaaatagaacatgaaaccgt 668 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 89 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 148 |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 174 gaactgaaacatctaagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcgg 233 Query: 149 cgagcgaaatgggagcagcctaaacc 174 |||||||| ||||| ||||||||||| Sbjct: 234 cgagcgaactgggatcagcctaaacc 259 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 482 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 700 ctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggcttggttaagg 758
>gb|L43354.1|CRECPRRNLE Chlamydomonas iyengarii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3923 Score = 176 bits (89), Expect = 5e-41 Identities = 136/152 (89%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 459 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 518 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 519 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 578 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgt 445 | || ||||||||||||| ||||||||| Sbjct: 579 ttgttagggagtgaaatagaacatgaaaccgt 610 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 89 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 148 |||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaatagaaagcaaacgcgattcccgtagtagcgg 234 Query: 149 cgagcgaaatgggagcagcctaaacc 174 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 483 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 530 ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 643 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 690 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Plus Query: 7 aagcatagatccggagattcccaaataggtcaacct 42 |||||| ||||||||||||||| |||||| |||||| Sbjct: 92 aagcattgatccggagattcccgaatagggcaacct 127
>gb|L42991.1|CRECPRGOLE Chlamydomonas radiata chloroplast large subunit ribosomal RNA (rrnL) gene Length = 2792 Score = 176 bits (89), Expect = 5e-41 Identities = 136/152 (89%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 509 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 568 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 569 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 628 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgt 445 || |||| ||||||||||||| ||||||||| Sbjct: 629 ccgttggggagtgaaatagaacatgaaaccgt 660 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 89 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 148 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||| || Sbjct: 156 gaactgaaacatctaagtagctggaggaaaagaaagcaaaagcgattcccgtagtagtgg 215 Query: 149 cgagcgaaatgggagcagcctaaacc 174 |||||||| |||| ||||||||||| Sbjct: 216 cgagcgaaccgggaacagcctaaacc 241 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 482 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 529 |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 691 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 738
>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2888 Score = 176 bits (89), Expect = 5e-41 Identities = 136/152 (89%) Strand = Plus / Plus Query: 294 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 353 ||||||||||||||| |||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 425 cccgagtagcatgggacacgtggaatcccgtgtgaatccgcgaggaccacctcgtaaggc 484 Query: 354 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 413 |||||||||||| ||||||||||| ||| ||||||| ||||||| |||||||||||||| Sbjct: 485 taaatactcctgagtgaccgatagagaaagagtaccgcgagggaacggtgaaaagaaccc 544 Query: 414 ccantgggtagtgaaatagaacgtgaaaccgt 445 | |||| ||||||||||||| ||||||||| Sbjct: 545 ctgttggggagtgaaatagaacatgaaaccgt 576 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 89 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 148 |||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 158 gaactgaaacatctaagtagccggaggaaaagaaagcaaacgcgattcccgtagtagcgg 217 Query: 149 cgagcgaaatgggagcagcctaaacc 174 |||||||| |||| |||||||||| Sbjct: 218 cgagcgaaccgggaagagcctaaacc 243 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 482 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 540 |||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 610 ctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggcttggttaagg 668
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 293 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 352 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 365 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 424 Query: 353 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 412 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 425 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 484 Query: 413 c 413 | Sbjct: 485 c 485 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 80 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 139 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 140 tagtagcggcgagcgaaatgggagcagcctaaaccg 175 |||||||||||||||| |||| |||||||||||| Sbjct: 210 cagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 89.7 bits (45), Expect = 9e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 482 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 530 ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcggtggc 599 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Plus Query: 216 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 265 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 287 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 336
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 293 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 352 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 437 Query: 353 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 412 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 438 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 497 Query: 413 c 413 | Sbjct: 498 c 498 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 80 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 139 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 163 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 222 Query: 140 tagtagcggcgagcgaaatgggagcagcctaaaccg 175 |||||||||||||||| |||| |||||||||||| Sbjct: 223 cagtagcggcgagcgaagagggaacagcctaaaccg 258 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Plus Query: 482 ctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 523 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 ctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 605 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Plus Query: 216 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 265 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 300 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 349
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 293 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 352 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 4952 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 5011 Query: 353 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 412 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 5012 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 5071 Query: 413 c 413 | Sbjct: 5072 c 5072 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 80 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 139 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 4737 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 4796 Query: 140 tagtagcggcgagcgaaatgggagcagcctaaaccg 175 |||||||||||||||| |||| |||||||||||| Sbjct: 4797 cagtagcggcgagcgaagagggaacagcctaaaccg 4832 Score = 89.7 bits (45), Expect = 9e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 482 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 530 ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5138 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcggtggc 5186 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Plus Query: 216 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 265 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 4874 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 4923 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,817,231 Number of Sequences: 3902068 Number of extensions: 3817231 Number of successful extensions: 115810 Number of sequences better than 10.0: 26557 Number of HSP's better than 10.0 without gapping: 26386 Number of HSP's successfully gapped in prelim test: 206 Number of HSP's that attempted gapping in prelim test: 72727 Number of HSP's gapped (non-prelim): 41605 length of query: 547 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 524 effective length of database: 17,143,297,704 effective search space: 8983087996896 effective search space used: 8983087996896 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
