| Clone Name | basd27b23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC134930.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0042J17, complete sequence Length = 124139 Score = 131 bits (66), Expect = 2e-27 Identities = 111/126 (88%) Strand = Plus / Minus Query: 275 tctgctctgcagatctttgggatctacatgatcaaagacaaggacaacgcgactctggag 334 |||| ||| |||||||||||||| |||||||| |||||||||||||||| |||| |||| Sbjct: 68648 tctgttctacagatctttgggatttacatgattaaagacaaggacaacgtgactttggac 68589 Query: 335 gacgtgctgcagcccgggaccgacatgatcgctgctggctactgcatgtacgggagttca 394 || || ||||| || || || |||||| | |||||||||||||||||||||||||||||| Sbjct: 68588 gatgtactgcaacctggaacagacatgcttgctgctggctactgcatgtacgggagttca 68529 Query: 395 tgcacg 400 |||||| Sbjct: 68528 tgcacg 68523
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 131 bits (66), Expect = 2e-27 Identities = 111/126 (88%) Strand = Plus / Minus Query: 275 tctgctctgcagatctttgggatctacatgatcaaagacaaggacaacgcgactctggag 334 |||| ||| |||||||||||||| |||||||| |||||||||||||||| |||| |||| Sbjct: 21351326 tctgttctacagatctttgggatttacatgattaaagacaaggacaacgtgactttggac 21351267 Query: 335 gacgtgctgcagcccgggaccgacatgatcgctgctggctactgcatgtacgggagttca 394 || || ||||| || || || |||||| | |||||||||||||||||||||||||||||| Sbjct: 21351266 gatgtactgcaacctggaacagacatgcttgctgctggctactgcatgtacgggagttca 21351207 Query: 395 tgcacg 400 |||||| Sbjct: 21351206 tgcacg 21351201 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tctggaggacgtgctgcagc 347 |||||||||||||||||||| Sbjct: 24967081 tctggaggacgtgctgcagc 24967062
>ref|XM_475314.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1032 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 286 gatctttgggatctacatgatcaaagacaaggacaacgcgactctggaggacgtgctgca 345 |||||||||||| |||||||| |||||||||||||||| |||| |||| || || ||||| Sbjct: 417 gatctttgggatttacatgattaaagacaaggacaacgtgactttggacgatgtactgca 476 Query: 346 gcccgggaccgacatgatcgctgctggctactgcatgtacgggagttcatgcacg 400 || || || |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 477 acctggaacagacatgcttgctgctggctactgcatgtacgggagttcatgcacg 531 Score = 71.9 bits (36), Expect = 2e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 17 ttctcgtgtctgaggagaacgaggcggccatattcgtggacgccccgctccgcgggaagt 76 |||| |||||||| |||||||||| |||||| |||| ||||| || |||||||| |||| Sbjct: 293 ttcttgtgtctgaagagaacgaggaggccattatcgtcgacgctcccctccgcggaaagt 352 Query: 77 actgcgtatgcttcgaccccttggacggctcctccaacatcgactgcggcgtctccatcg 136 | ||||| || || || || |||| |||||||| || ||||| || || |||||||||| Sbjct: 353 attgcgtttgttttgatccactggatggctcctcaaatatcgattgtggtgtctccatcg 412 Query: 137 ggac 140 |||| Sbjct: 413 ggac 416
>gb|AY035554.1| Oryza sativa cytosolic fructose-1,6-bisphosphatase mRNA, partial cds Length = 459 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 286 gatctttgggatctacatgatcaaagacaaggacaacgcgactctggaggacgtgctgca 345 |||||||||||| |||||||| |||||||||||||||| |||| |||| || || ||||| Sbjct: 27 gatctttgggatttacatgattaaagacaaggacaacgtgactttggacgatgtactgca 86 Query: 346 gcccgggaccgacatgatcgctgctggctactgcatgtacgggagttcatgcacg 400 || || || |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 87 acctggaacagacatgcttgctgctggctactgcatgtacgggagttcatgcacg 141
>gb|AF378182.1|AF378182 Oryza sativa cultivar Stejaree45 cytosolic fructose-1 mRNA, partial cds Length = 461 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 286 gatctttgggatctacatgatcaaagacaaggacaacgcgactctggaggacgtgctgca 345 |||||||||||| |||||||| |||||||||||||||| |||| |||| || || ||||| Sbjct: 27 gatctttgggatttacatgattaaagacaaggacaacgtgactttggacgatgtactgca 86 Query: 346 gcccgggaccgacatgatcgctgctggctactgcatgtacgggagttcatgcacg 400 || || || |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 87 acctggaacagacatgcttgctgctggctactgcatgtacgggagttcatgcacg 141
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Plus Query: 285 agatctttgggatctacatgatcaaagacaaggacaacgcgactctggaggacgtgctgc 344 |||||||||||||||||||||||||||| ||||| || | |||||| ||||||||| | | Sbjct: 37514159 agatctttgggatctacatgatcaaagataaggagaatgtgactcttgaggacgtgttac 37514218 Query: 345 agcccgggaccgacatgatcgctgctggctactgcatgtacgggagttcatgcacg 400 |||| || | ||||| | |||||||| |||||||||||||| ||||| |||||| Sbjct: 37514219 agcctggaaaaaacatggttgctgctggatactgcatgtacggcagttcctgcacg 37514274 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 100 gacggctcctccaacatcgactgcggcgtctccatcgg 137 ||||||||||||||||||||||| |||||||||||||| Sbjct: 37513715 gacggctcctccaacatcgactgtggcgtctccatcgg 37513752
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Plus Query: 285 agatctttgggatctacatgatcaaagacaaggacaacgcgactctggaggacgtgctgc 344 |||||||||||||||||||||||||||| ||||| || | |||||| ||||||||| | | Sbjct: 108696 agatctttgggatctacatgatcaaagataaggagaatgtgactcttgaggacgtgttac 108755 Query: 345 agcccgggaccgacatgatcgctgctggctactgcatgtacgggagttcatgcacg 400 |||| || | ||||| | |||||||| |||||||||||||| ||||| |||||| Sbjct: 108756 agcctggaaaaaacatggttgctgctggatactgcatgtacggcagttcctgcacg 108811 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 100 gacggctcctccaacatcgactgcggcgtctccatcgg 137 ||||||||||||||||||||||| |||||||||||||| Sbjct: 108252 gacggctcctccaacatcgactgtggcgtctccatcgg 108289
>ref|NM_190752.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1110 Score = 93.7 bits (47), Expect = 4e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 286 gatctttgggatctacatgatcaaagacaaggacaacgcgactctggaggacgtgctgca 345 ||||||||||||||||||||||||||| ||||| || | |||||| ||||||||| | || Sbjct: 471 gatctttgggatctacatgatcaaagataaggagaatgtgactcttgaggacgtgttaca 530 Query: 346 gcccgggaccgacatgatcgctgctggctactgcatgtacgggagttcatgcacg 400 ||| || | ||||| | |||||||| |||||||||||||| ||||| |||||| Sbjct: 531 gcctggaaaaaacatggttgctgctggatactgcatgtacggcagttcctgcacg 585 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 49 ttcgtggacgccccgctccgcgggaagtactgcgtatgcttcgaccccttggacggctcc 108 ||||||||| | |||| || |||||||| ||||| ||||| || || | ||||||||| Sbjct: 379 ttcgtggaccctgcgctgcgtgggaagtattgcgtgtgctttgatccactcgacggctcc 438 Query: 109 tccaacatcgactgcggcgtctccatcgg 137 |||||||||||||| |||||||||||||| Sbjct: 439 tccaacatcgactgtggcgtctccatcgg 467
>gb|AF378183.1|AF378183 Oryza sativa cultivar Milyang23 cytosolic fructose-1 mRNA, partial cds Length = 504 Score = 93.7 bits (47), Expect = 4e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 286 gatctttgggatctacatgatcaaagacaaggacaacgcgactctggaggacgtgctgca 345 ||||||||||||||||||||||||||| ||||| || | |||||| ||||||||| | || Sbjct: 36 gatctttgggatctacatgatcaaagataaggagaatgtgactcttgaggacgtgttaca 95 Query: 346 gcccgggaccgacatgatcgctgctggctactgcatgtacgggagttcatgcacg 400 ||| || | ||||| | |||||||| |||||||||||||| ||||| |||||| Sbjct: 96 gcctggaaaaaacatggttgctgctggatactgcatgtacggcagttcctgcacg 150
>dbj|AK119536.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-B07, full insert sequence Length = 1315 Score = 93.7 bits (47), Expect = 4e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 286 gatctttgggatctacatgatcaaagacaaggacaacgcgactctggaggacgtgctgca 345 ||||||||||||||||||||||||||| ||||| || | |||||| ||||||||| | || Sbjct: 514 gatctttgggatctacatgatcaaagataaggagaatgtgactcttgaggacgtgttaca 573 Query: 346 gcccgggaccgacatgatcgctgctggctactgcatgtacgggagttcatgcacg 400 ||| || | ||||| | |||||||| |||||||||||||| ||||| |||||| Sbjct: 574 gcctggaaaaaacatggttgctgctggatactgcatgtacggcagttcctgcacg 628 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 49 ttcgtggacgccccgctccgcgggaagtactgcgtatgcttcgaccccttggacggctcc 108 ||||||||| | |||| || |||||||| ||||| ||||| || || | ||||||||| Sbjct: 422 ttcgtggaccctgcgctgcgtgggaagtattgcgtgtgctttgatccactcgacggctcc 481 Query: 109 tccaacatcgactgcggcgtctccatcgg 137 |||||||||||||| |||||||||||||| Sbjct: 482 tccaacatcgactgtggcgtctccatcgg 510
>dbj|AK070516.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023057C24, full insert sequence Length = 1376 Score = 93.7 bits (47), Expect = 4e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 286 gatctttgggatctacatgatcaaagacaaggacaacgcgactctggaggacgtgctgca 345 ||||||||||||||||||||||||||| ||||| || | |||||| ||||||||| | || Sbjct: 522 gatctttgggatctacatgatcaaagataaggagaatgtgactcttgaggacgtgttaca 581 Query: 346 gcccgggaccgacatgatcgctgctggctactgcatgtacgggagttcatgcacg 400 ||| || | ||||| | |||||||| |||||||||||||| ||||| |||||| Sbjct: 582 gcctggaaaaaacatggttgctgctggatactgcatgtacggcagttcctgcacg 636 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 49 ttcgtggacgccccgctccgcgggaagtactgcgtatgcttcgaccccttggacggctcc 108 ||||||||| | |||| || |||||||| ||||| ||||| || || | ||||||||| Sbjct: 430 ttcgtggaccctgcgctgcgtgggaagtattgcgtgtgctttgatccactcgacggctcc 489 Query: 109 tccaacatcgactgcggcgtctccatcgg 137 |||||||||||||| |||||||||||||| Sbjct: 490 tccaacatcgactgtggcgtctccatcgg 518
>gb|AY104220.1| Zea mays PCO073762 mRNA sequence Length = 1416 Score = 93.7 bits (47), Expect = 4e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 286 gatctttgggatctacatgatcaaagacaaggacaacgcgactctggaggacgtgctgca 345 |||||||||||| ||||| ||||| ||||||||||||| |||||||||||||||||||| Sbjct: 849 gatctttgggatttacatcatcaaggacaaggacaacgtcactctggaggacgtgctgca 908 Query: 346 gcccgggaccgacatgatcgctgctggctactgcatgtacgggagttcatgcacg 400 || || | ||||| |||| || || |||||||||||||| ||||| |||||| Sbjct: 909 acctggcaagaacatgctcgccgccggatactgcatgtacggcagttcctgcacg 963 Score = 69.9 bits (35), Expect = 6e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 75 gtactgcgtatgcttcgaccccttggacggctcctccaacatcgactgcggcgtctccat 134 ||||||||| ||||| || ||| | ||||||||||||||||||||||| ||||||||| | Sbjct: 783 gtactgcgtctgctttgatcccctcgacggctcctccaacatcgactgtggcgtctcctt 842 Query: 135 cgg 137 ||| Sbjct: 843 cgg 845
>dbj|AB007193.1| Oryza sativa mRNA for fructose-1,6-bisphosphatase (cytosolic isoform), complete cds Length = 1544 Score = 93.7 bits (47), Expect = 4e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 286 gatctttgggatctacatgatcaaagacaaggacaacgcgactctggaggacgtgctgca 345 ||||||||||||||||||||||||||| ||||| || | |||||| ||||||||| | || Sbjct: 491 gatctttgggatctacatgatcaaagataaggagaatgtgactcttgaggacgtgttaca 550 Query: 346 gcccgggaccgacatgatcgctgctggctactgcatgtacgggagttcatgcacg 400 ||| || | ||||| | |||||||| |||||||||||||| ||||| |||||| Sbjct: 551 gcctggaaaaaacatggttgctgctggatactgcatgtacggcagttcctgcacg 605 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 49 ttcgtggacgccccgctccgcgggaagtactgcgtatgcttcgaccccttggacggctcc 108 ||||||||| | |||| || |||||||| ||||| ||||| || || | ||||||||| Sbjct: 399 ttcgtggaccctgcgctgcgtgggaagtattgcgtgtgctttgatccactcgacggctcc 458 Query: 109 tccaacatcgactgcggcgtctccatcgg 137 |||||||||||||| |||||||||||||| Sbjct: 459 tccaacatcgactgtggcgtctccatcgg 487
>gb|AF218845.1|AF218845 Porteresia coarctata fructose-1,6-bisphosphatase mRNA, complete cds Length = 1035 Score = 85.7 bits (43), Expect = 1e-13 Identities = 97/115 (84%) Strand = Plus / Plus Query: 286 gatctttgggatctacatgatcaaagacaaggacaacgcgactctggaggacgtgctgca 345 ||||||||||||||| ||||||||||| ||||| || | |||||| ||||||||| | || Sbjct: 411 gatctttgggatctatatgatcaaagataaggataatgtgactcttgaggacgtgttaca 470 Query: 346 gcccgggaccgacatgatcgctgctggctactgcatgtacgggagttcatgcacg 400 |||||| | | ||| | |||||||| |||||||||||||| ||||| |||||| Sbjct: 471 gcccggaaaaaatatggttgctgctggatactgcatgtacggcagttcctgcacg 525 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 100 gacggctcctccaacatcgactgcggcgtctccatcgg 137 ||||||||||||||||||||||| |||||||||||||| Sbjct: 370 gacggctcctccaacatcgactgtggcgtctccatcgg 407
>emb|X89006.1|SHRNAF16B Saccharum hybrid cultivar H65-7052 mRNA for cytosolic fructose-1,6-bisphosphatase Length = 1318 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 70 gggaagtactgcgtatgcttcgaccccttggacggctcctccaacatcgactgcggcgtc 129 ||||||||||| || ||||| || ||| | ||||| ||||||||||||||||| |||||| Sbjct: 410 gggaagtactgtgtttgctttgatcccctcgacggttcctccaacatcgactgtggcgtc 469 Query: 130 tccatcgg 137 |||||||| Sbjct: 470 tccatcgg 477 Score = 61.9 bits (31), Expect = 1e-06 Identities = 94/115 (81%) Strand = Plus / Plus Query: 286 gatctttgggatctacatgatcaaagacaaggacaacgcgactctggaggacgtgctgca 345 |||||||||||| ||||||||||| ||||||||||| | |||||| ||||| ||||| Sbjct: 481 gatctttgggatttacatgatcaaggacaaggacaatgtcactctgtccgacgtactgca 540 Query: 346 gcccgggaccgacatgatcgctgctggctactgcatgtacgggagttcatgcacg 400 || || | |||||| | || ||||| ||||||||||| || ||||| |||||| Sbjct: 541 acctggcaaggacatgcttgccgctggatactgcatgtatggcagttcctgcacg 595
>emb|AJ295035.1|FRU295035 Fugu rubripes partial cosmid ICRFc65H1793Q7 Length = 930 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 98 tggacggctcctccaacatcgactgcggcgtctccatcgg 137 |||||||||||||||||||||||||| ||| |||||||| Sbjct: 375 tggacggctcctccaacatcgactgcctcgtatccatcgg 336
>emb|CR730053.2|CNS0GQ97 Tetraodon nigroviridis full-length cDNA Length = 1070 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 100 gacggctcctccaacatcgactgcggcgtctccatcgg 137 |||||||||||||||||||||||| ||| |||||||| Sbjct: 384 gacggctcctccaacatcgactgcctcgtatccatcgg 421
>emb|CR724914.2|CNS0GMAG Tetraodon nigroviridis full-length cDNA Length = 1080 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 100 gacggctcctccaacatcgactgcggcgtctccatcgg 137 |||||||||||||||||||||||| ||| |||||||| Sbjct: 395 gacggctcctccaacatcgactgcctcgtatccatcgg 432
>emb|CR722441.2|CNS0GKDR Tetraodon nigroviridis full-length cDNA Length = 1090 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 100 gacggctcctccaacatcgactgcggcgtctccatcgg 137 |||||||||||||||||||||||| ||| |||||||| Sbjct: 399 gacggctcctccaacatcgactgcctcgtatccatcgg 436
>emb|CR719819.2|CNS0GICX Tetraodon nigroviridis full-length cDNA Length = 1034 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 100 gacggctcctccaacatcgactgcggcgtctccatcgg 137 |||||||||||||||||||||||| ||| |||||||| Sbjct: 348 gacggctcctccaacatcgactgcctcgtatccatcgg 385
>emb|CR676040.2|CNS0FKLQ Tetraodon nigroviridis full-length cDNA Length = 1060 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 100 gacggctcctccaacatcgactgcggcgtctccatcgg 137 |||||||||||||||||||||||| ||| |||||||| Sbjct: 373 gacggctcctccaacatcgactgcctcgtatccatcgg 410
>gb|AF424646.1| Phytophthora infestans clone MY-04-G-12 fructose-1 6-biphosphatase mRNA, complete cds Length = 1126 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 87 cttcgaccccttggacggctcctccaacatcgactgc 123 ||||||||| ||||||||||| |||||||| |||||| Sbjct: 372 cttcgacccgttggacggctcatccaacattgactgc 408
>gb|BT012957.1| Lycopersicon esculentum clone 114145F, mRNA sequence Length = 1463 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Plus Query: 286 gatctttgggatctacatgatcaaagac 313 |||||||||||| ||||||||||||||| Sbjct: 429 gatctttgggatttacatgatcaaagac 456
>ref|XM_962709.1| PREDICTED: Tribolium castaneum similar to CG31692-PA, isoform A (LOC656164), mRNA Length = 1179 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 98 tggacggctcctccaacatcgactgcggcgtctccatcgg 137 |||||||||||||||||||||| ||| |||||| ||||| Sbjct: 479 tggacggctcctccaacatcgattgcctcgtctcaatcgg 518
>gb|AC009911.11| Drosophila melanogaster clone BACR01N17, complete sequence Length = 170190 Score = 46.1 bits (23), Expect = 0.087 Identities = 35/39 (89%) Strand = Plus / Plus Query: 85 tgcttcgaccccttggacggctcctccaacatcgactgc 123 |||||||| |||||||| || ||||||||||| |||||| Sbjct: 6187 tgcttcgatcccttggatggatcctccaacatagactgc 6225
>ref|NM_165314.1| Drosophila melanogaster fructose-1,6-bisphosphatase CG31692-RB, transcript variant B (fbp), mRNA Length = 1208 Score = 46.1 bits (23), Expect = 0.087 Identities = 35/39 (89%) Strand = Plus / Plus Query: 85 tgcttcgaccccttggacggctcctccaacatcgactgc 123 |||||||| |||||||| || ||||||||||| |||||| Sbjct: 497 tgcttcgatcccttggatggatcctccaacatagactgc 535
>ref|NM_136157.2| Drosophila melanogaster fructose-1,6-bisphosphatase CG31692-RA, transcript variant A (fbp), mRNA Length = 1136 Score = 46.1 bits (23), Expect = 0.087 Identities = 35/39 (89%) Strand = Plus / Plus Query: 85 tgcttcgaccccttggacggctcctccaacatcgactgc 123 |||||||| |||||||| || ||||||||||| |||||| Sbjct: 425 tgcttcgatcccttggatggatcctccaacatagactgc 463
>gb|AY047506.1| Drosophila melanogaster GH01546 full length cDNA Length = 1129 Score = 46.1 bits (23), Expect = 0.087 Identities = 35/39 (89%) Strand = Plus / Plus Query: 85 tgcttcgaccccttggacggctcctccaacatcgactgc 123 |||||||| |||||||| || ||||||||||| |||||| Sbjct: 408 tgcttcgatcccttggatggatcctccaacatagactgc 446
>gb|AC005719.2|AC005719 Drosophila melanogaster, chromosome 2L, region 38A5-38B4, BAC clone BACR48M05, complete sequence Length = 188341 Score = 46.1 bits (23), Expect = 0.087 Identities = 35/39 (89%) Strand = Plus / Plus Query: 85 tgcttcgaccccttggacggctcctccaacatcgactgc 123 |||||||| |||||||| || ||||||||||| |||||| Sbjct: 180246 tgcttcgatcccttggatggatcctccaacatagactgc 180284
>gb|AE003664.3| Drosophila melanogaster chromosome 2L, section 73 of 83 of the complete sequence Length = 266287 Score = 46.1 bits (23), Expect = 0.087 Identities = 35/39 (89%) Strand = Plus / Minus Query: 85 tgcttcgaccccttggacggctcctccaacatcgactgc 123 |||||||| |||||||| || ||||||||||| |||||| Sbjct: 30261 tgcttcgatcccttggatggatcctccaacatagactgc 30223
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Minus Query: 98 tggacggctcctccaacatcgac 120 ||||||||||||||||||||||| Sbjct: 6582108 tggacggctcctccaacatcgac 6582086
>ref|NM_187472.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1221 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Plus Query: 100 gacggctcctccaacatcgactgcggcgtctcca 133 ||||||||||||||||||||| || |||||||| Sbjct: 541 gacggctcctccaacatcgacgccgccgtctcca 574
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Minus Query: 100 gacggctcctccaacatcgactgcggcgtctcca 133 ||||||||||||||||||||| || |||||||| Sbjct: 8814593 gacggctcctccaacatcgacgccgccgtctcca 8814560
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Minus Query: 87 cttcgaccccttggacggctcctccaacatcgac 120 |||||| ||| |||||||||| |||||||||||| Sbjct: 1628950 cttcgatcccctggacggctcttccaacatcgac 1628917
>gb|AC110157.7| Mus musculus chromosome 14, clone RP23-151K23, complete sequence Length = 243114 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 149 ctccctgccaccctgcttctcc 170 |||||||||||||||||||||| Sbjct: 28081 ctccctgccaccctgcttctcc 28060
>emb|AL353741.16| Human DNA sequence from clone RP11-575C20 on chromosome 9 Contains a general transcription factor IIIA (GTF3A) pseudogene, a novel gene (DVS27) and a CpG island, complete sequence Length = 199517 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 276 ctgctctgcagatctttgggat 297 |||||||||||||||||||||| Sbjct: 157554 ctgctctgcagatctttgggat 157575
>emb|X53957.1|TAFBP1 Wheat FBP gene for chloroplast fructose-1,6-bisphosphatase Length = 3600 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Plus Query: 100 gacggctcctccaacatcgactgcggcgtctcca 133 ||||||||||||||||||||| || |||||||| Sbjct: 2363 gacggctcctccaacatcgacgccgccgtctcca 2396
>emb|X07780.1|TAFBP Wheat mRNA for fructose-1,6-bisphosphatase (EC 3.1.3.11) Length = 1399 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Plus Query: 100 gacggctcctccaacatcgactgcggcgtctcca 133 ||||||||||||||||||||| || |||||||| Sbjct: 620 gacggctcctccaacatcgacgccgccgtctcca 653
>emb|CR384090.7| Zebrafish DNA sequence from clone CH211-142J15 in linkage group 5, complete sequence Length = 70119 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Plus Query: 85 tgcttcgaccccttggacggctcctccaacatcgactg 122 ||||| || ||| |||| |||||||||||||||||||| Sbjct: 40387 tgctttgatcccctggatggctcctccaacatcgactg 40424
>ref|NM_001004008.1| Danio rerio zgc:101083 (zgc:101083), mRNA Length = 1220 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Plus Query: 85 tgcttcgaccccttggacggctcctccaacatcgactg 122 ||||| || ||| |||| |||||||||||||||||||| Sbjct: 405 tgctttgatcccctggatggctcctccaacatcgactg 442
>gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1364E02, complete sequence Length = 126027 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Minus Query: 100 gacggctcctccaacatcgactgcggcgtctcca 133 ||||||||||||||||||||| || |||||||| Sbjct: 5481 gacggctcctccaacatcgacgccgccgtctcca 5448
>gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1364E02, complete sequence Length = 112265 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Minus Query: 100 gacggctcctccaacatcgactgcggcgtctcca 133 ||||||||||||||||||||| || |||||||| Sbjct: 57746 gacggctcctccaacatcgacgccgccgtctcca 57713
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Minus Query: 100 gacggctcctccaacatcgactgcggcgtctcca 133 ||||||||||||||||||||| || |||||||| Sbjct: 8812428 gacggctcctccaacatcgacgccgccgtctcca 8812395
>gb|BC080232.1| Danio rerio zgc:101083, mRNA (cDNA clone MGC:101083 IMAGE:7154290), complete cds Length = 1220 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Plus Query: 85 tgcttcgaccccttggacggctcctccaacatcgactg 122 ||||| || ||| |||| |||||||||||||||||||| Sbjct: 405 tgctttgatcccctggatggctcctccaacatcgactg 442
>dbj|AK065201.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E24, full insert sequence Length = 1495 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Plus Query: 100 gacggctcctccaacatcgactgcggcgtctcca 133 ||||||||||||||||||||| || |||||||| Sbjct: 599 gacggctcctccaacatcgacgccgccgtctcca 632
>dbj|AK062233.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-D10, full insert sequence Length = 1404 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Plus Query: 100 gacggctcctccaacatcgactgcggcgtctcca 133 ||||||||||||||||||||| || |||||||| Sbjct: 613 gacggctcctccaacatcgacgccgccgtctcca 646
>dbj|AB007194.1| Oryza sativa mRNA for fructose-1,6-bisphosphatase (plastidic isoform), complete cds Length = 1424 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Plus Query: 100 gacggctcctccaacatcgactgcggcgtctcca 133 ||||||||||||||||||||| || |||||||| Sbjct: 581 gacggctcctccaacatcgacgccgccgtctcca 614
>emb|BX067027.1|CNS09NVR Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC50CB10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 969 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 98 tggacggctcctccaacatcgactg 122 ||||||| ||||||||||||||||| Sbjct: 558 tggacggttcctccaacatcgactg 582
>emb|BX066404.1|CNS09NEG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC5CG12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 837 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 98 tggacggctcctccaacatcgactg 122 ||||||| ||||||||||||||||| Sbjct: 542 tggacggttcctccaacatcgactg 566
>emb|BX018798.1|CNS08MO2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA28CB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1016 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 tggacggctcctccaacatcgactg 122 ||||||| ||||||||||||||||| Sbjct: 718 tggacggttcctccaacatcgactg 694
>emb|BX018797.1|CNS08MO1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA28CB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1038 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 98 tggacggctcctccaacatcgactg 122 ||||||| ||||||||||||||||| Sbjct: 623 tggacggttcctccaacatcgactg 647
>emb|BX007960.1|CNS08EB0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA13AH09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 950 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 tggacggctcctccaacatcgactg 122 ||||||| ||||||||||||||||| Sbjct: 709 tggacggttcctccaacatcgactg 685
>emb|BX007959.1|CNS08EAZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA13AH09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 908 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 98 tggacggctcctccaacatcgactg 122 ||||||| ||||||||||||||||| Sbjct: 586 tggacggttcctccaacatcgactg 610
>emb|BX007671.1|CNS08E2Z Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA12DB06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1024 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 98 tggacggctcctccaacatcgactg 122 ||||||| ||||||||||||||||| Sbjct: 643 tggacggttcctccaacatcgactg 667
>gb|AC130371.4| Homo sapiens chromosome 17, clone RP11-1197K16, complete sequence Length = 195613 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 gcttctccgagcagagctgct 183 ||||||||||||||||||||| Sbjct: 179976 gcttctccgagcagagctgct 179956
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 gacggctcctccaacatcgac 120 ||||||||||||||||||||| Sbjct: 2823547 gacggctcctccaacatcgac 2823567
>ref|XM_319938.2| Anopheles gambiae str. PEST ENSANGP00000023660 (ENSANGG00000014352), partial mRNA Length = 906 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 98 tggacggctcctccaacatcgactg 122 ||||||| ||||||||||||||||| Sbjct: 608 tggacggttcctccaacatcgactg 632
>ref|XM_319937.2| Anopheles gambiae str. PEST ENSANGP00000016841 (ENSANGG00000014352), mRNA Length = 1361 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 98 tggacggctcctccaacatcgactg 122 ||||||| ||||||||||||||||| Sbjct: 641 tggacggttcctccaacatcgactg 665
>gb|AY150332.1| Bradyrhizobium japonicum cbb locus, complete sequence Length = 11735 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 gacggctcctccaacatcgac 120 ||||||||||||||||||||| Sbjct: 2906 gacggctcctccaacatcgac 2926
>ref|XM_475667.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1500 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tctggaggacgtgctgcagc 347 |||||||||||||||||||| Sbjct: 361 tctggaggacgtgctgcagc 342
>ref|XM_960700.1| Neurospora crassa OR74A hypothetical protein (NCU00653.1) partial mRNA Length = 1767 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cttggacggctcctccaaca 115 |||||||||||||||||||| Sbjct: 1476 cttggacggctcctccaaca 1457
>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0108E17, complete sequence Length = 139829 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tctggaggacgtgctgcagc 347 |||||||||||||||||||| Sbjct: 35934 tctggaggacgtgctgcagc 35915
>ref|XM_324832.1| Neurospora crassa OR74A hypothetical protein (NCU00653.1) partial mRNA Length = 1767 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cttggacggctcctccaaca 115 |||||||||||||||||||| Sbjct: 1476 cttggacggctcctccaaca 1457
>emb|AL356580.13| Human DNA sequence from clone RP11-383H17 on chromosome 13 Contains a 60S ribosomal protein L7A (RPL7A) pseudogene, the 5' end of the KPNB3 gene for karyopherin (importin) beta 3, a pseudogene similar to part of ferritin light polypeptide (FTL) and a CpG island, complete sequence Length = 161072 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 ctggtttactcaccgctatcattc 261 |||||||||||||| ||||||||| Sbjct: 27160 ctggtttactcacctctatcattc 27183
>emb|X76946.1|STCYF1 S.tuberosum cy-F1 mRNA for cytosolic fructose-1,6-biphosphatase Length = 1487 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 286 gatctttgggatctacatgatcaaagac 313 ||||||||| || ||||||||||||||| Sbjct: 609 gatctttggaatttacatgatcaaagac 636
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 88 ttcgaccccttggacggctcctccaacatcga 119 |||||||| ||||||||||||| |||||||| Sbjct: 453411 ttcgacccgctggacggctcctcgaacatcga 453442
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 gacggctcctccaacatcga 119 |||||||||||||||||||| Sbjct: 3156312 gacggctcctccaacatcga 3156293
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 acatcgactgcggcgtctcc 132 |||||||||||||||||||| Sbjct: 2638387 acatcgactgcggcgtctcc 2638406
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 cgaccccttggacggctcctccaa 113 |||||||||| ||||||||||||| Sbjct: 1081850 cgaccccttgaacggctcctccaa 1081827
>dbj|AK106758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-D09, full insert sequence Length = 3740 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tctggaggacgtgctgcagc 347 |||||||||||||||||||| Sbjct: 1841 tctggaggacgtgctgcagc 1822
>dbj|AB013851.1| Aspergillus oryzae gene for beta-xylosidase A, complete cds Length = 4323 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 acatcgactgcggcgtctcc 132 |||||||||||||||||||| Sbjct: 2070 acatcgactgcggcgtctcc 2089
>dbj|AB009972.1| Aspergillus oryzae gene for beta-1,4-xylosidase, complete cds Length = 5021 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 acatcgactgcggcgtctcc 132 |||||||||||||||||||| Sbjct: 1333 acatcgactgcggcgtctcc 1352 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,277,496 Number of Sequences: 3902068 Number of extensions: 2277496 Number of successful extensions: 39618 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 72 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 39310 Number of HSP's gapped (non-prelim): 298 length of query: 400 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 378 effective length of database: 17,147,199,772 effective search space: 6481641513816 effective search space used: 6481641513816 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)