ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26m23 |
|---|---|
| Clone Library Name | barley_pub |
>FMO2_PONPY (Q5REK0) Dimethylaniline monooxygenase [N-oxide-forming] 2 (EC| 1.14.13.8) (Pulmonary flavin-containing monooxygenase 2) (FMO 2) (Dimethylaniline oxidase 2) (FMO 1B1) Length = 534 Score = 35.0 bits (79), Expect = 0.068 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +3 Query: 21 FPLFELQSHWVAGILXGRFQLPSEEEMMRDV 113 FP ELQ+ WV + G LPSE MM D+ Sbjct: 378 FPTAELQARWVTRVFKGLCSLPSERTMMMDI 408
>FMO2_PANTR (Q8HZ70) Dimethylaniline monooxygenase [N-oxide-forming] 2 (EC| 1.14.13.8) (Pulmonary flavin-containing monooxygenase 2) (FMO 2) (Dimethylaniline oxidase 2) (FMO 1B1) Length = 534 Score = 35.0 bits (79), Expect = 0.068 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +3 Query: 21 FPLFELQSHWVAGILXGRFQLPSEEEMMRDV 113 FP ELQ+ WV + G LPSE MM D+ Sbjct: 378 FPTAELQARWVTRVFKGLCSLPSERTMMMDI 408
>FMO2_MACMU (Q28505) Dimethylaniline monooxygenase [N-oxide-forming] 2 (EC| 1.14.13.8) (Pulmonary flavin-containing monooxygenase 2) (FMO 2) (Dimethylaniline oxidase 2) (FMO 1B1) Length = 534 Score = 35.0 bits (79), Expect = 0.068 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +3 Query: 21 FPLFELQSHWVAGILXGRFQLPSEEEMMRDV 113 FP ELQ+ WV + G LPSE MM D+ Sbjct: 378 FPTAELQARWVTRVFKGLCHLPSERTMMMDI 408
>FMO2_HUMAN (Q99518) Dimethylaniline monooxygenase [N-oxide-forming] 2 (EC| 1.14.13.8) (Pulmonary flavin-containing monooxygenase 2) (FMO 2) (Dimethylaniline oxidase 2) (FMO 1B1) Length = 534 Score = 35.0 bits (79), Expect = 0.068 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +3 Query: 21 FPLFELQSHWVAGILXGRFQLPSEEEMMRDV 113 FP ELQ+ WV + G LPSE MM D+ Sbjct: 378 FPTAELQARWVTRVFKGLCSLPSERTMMMDI 408
>FMO2_GORGO (Q8HZ69) Dimethylaniline monooxygenase [N-oxide-forming] 2 (EC| 1.14.13.8) (Pulmonary flavin-containing monooxygenase 2) (FMO 2) (Dimethylaniline oxidase 2) (FMO 1B1) Length = 534 Score = 35.0 bits (79), Expect = 0.068 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +3 Query: 21 FPLFELQSHWVAGILXGRFQLPSEEEMMRDV 113 FP ELQ+ WV + G LPSE MM D+ Sbjct: 378 FPTAELQARWVTRVFKGLCSLPSERTMMMDI 408
>FMO3_PANTR (Q7YS44) Dimethylaniline monooxygenase [N-oxide-forming] 3 (EC| 1.14.13.8) (Hepatic flavin-containing monooxygenase 3) (FMO 3) (Dimethylaniline oxidase 3) Length = 531 Score = 34.7 bits (78), Expect = 0.089 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +3 Query: 24 PLFELQSHWVAGILXGRFQLPSEEEMMRDV 113 P +LQS W A ++ G LPS E+MM D+ Sbjct: 379 PTVDLQSRWAAQVIKGTCTLPSMEDMMNDI 408
>FMO3_MACMU (Q8SPQ7) Dimethylaniline monooxygenase [N-oxide-forming] 3 (EC| 1.14.13.8) (Hepatic flavin-containing monooxygenase 3) (FMO 3) (Dimethylaniline oxidase 3) Length = 531 Score = 34.7 bits (78), Expect = 0.089 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +3 Query: 24 PLFELQSHWVAGILXGRFQLPSEEEMMRDV 113 P +LQS W A ++ G LPS E+MM D+ Sbjct: 379 PTVDLQSRWAARVIKGTCTLPSMEDMMNDI 408
>FMO3_HUMAN (P31513) Dimethylaniline monooxygenase [N-oxide-forming] 3 (EC| 1.14.13.8) (Hepatic flavin-containing monooxygenase 3) (FMO 3) (Dimethylaniline oxidase 3) (FMO form 2) (FMO II) Length = 531 Score = 34.7 bits (78), Expect = 0.089 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +3 Query: 24 PLFELQSHWVAGILXGRFQLPSEEEMMRDV 113 P +LQS W A ++ G LPS E+MM D+ Sbjct: 379 PTVDLQSRWAAQVIKGTCTLPSMEDMMNDI 408
>FMO2_CAVPO (P36366) Dimethylaniline monooxygenase [N-oxide-forming] 2 (EC| 1.14.13.8) (Pulmonary flavin-containing monooxygenase 2) (FMO 2) (Dimethylaniline oxidase 2) (FMO 1B1) Length = 534 Score = 34.7 bits (78), Expect = 0.089 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = +3 Query: 21 FPLFELQSHWVAGILXGRFQLPSEEEMMRDV 113 FP ELQ+ W + G LPSE+ MM D+ Sbjct: 378 FPTVELQARWATRVFKGLCHLPSEKTMMEDI 408
>FMO2_RABIT (P17635) Dimethylaniline monooxygenase [N-oxide-forming] 2 (EC| 1.14.13.8) (Pulmonary flavin-containing monooxygenase 2) (FMO 2) (Dimethylaniline oxidase 2) (FMO 1B1) Length = 534 Score = 34.3 bits (77), Expect = 0.12 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = +3 Query: 21 FPLFELQSHWVAGILXGRFQLPSEEEMMRDV 113 FP ELQ+ W + G LPS+E MM D+ Sbjct: 378 FPTVELQARWATRVFKGLCSLPSKETMMADI 408
>FMO5_CAVPO (P49109) Dimethylaniline monooxygenase [N-oxide-forming] 5 (EC| 1.14.13.8) (Hepatic flavin-containing monooxygenase 5) (FMO 5) (Dimethylaniline oxidase 5) Length = 532 Score = 33.9 bits (76), Expect = 0.15 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = +3 Query: 3 PLKVIPFPLFELQSHWVAGILXGRFQLPSEEEMMRDVTAFYSRLGAR 143 PL I P+ ELQ W + G LPS+ EMM ++T + R Sbjct: 373 PLGAI-MPISELQGRWAVQVFKGLKTLPSQSEMMAEITKAQEEIAKR 418
>FMO2_RAT (Q6IRI9) Dimethylaniline monooxygenase [N-oxide-forming] 2 (EC| 1.14.13.8) (Pulmonary flavin-containing monooxygenase 2) (FMO 2) (Dimethylaniline oxidase 2) Length = 534 Score = 33.5 bits (75), Expect = 0.20 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = +3 Query: 21 FPLFELQSHWVAGILXGRFQLPSEEEMMRDV 113 FP ELQ+ W + G +LPSE MM D+ Sbjct: 378 FPTVELQARWATRVFKGVCRLPSETTMMADI 408
>FMO2_MOUSE (Q8K2I3) Dimethylaniline monooxygenase [N-oxide-forming] 2 (EC| 1.14.13.8) (Pulmonary flavin-containing monooxygenase 2) (FMO 2) (Dimethylaniline oxidase 2) Length = 534 Score = 33.5 bits (75), Expect = 0.20 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +3 Query: 21 FPLFELQSHWVAGILXGRFQLPSEEEMMRDV 113 FP ELQ+ W + G LPSE MM D+ Sbjct: 378 FPTVELQARWATRVFKGLCSLPSETTMMADI 408
>FMO5_RABIT (Q04799) Dimethylaniline monooxygenase [N-oxide-forming] 5 (EC| 1.14.13.8) (Hepatic flavin-containing monooxygenase 5) (FMO 5) (Dimethylaniline oxidase 5) (FMO 1C1) (FMO form 3) Length = 532 Score = 33.1 bits (74), Expect = 0.26 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = +3 Query: 3 PLKVIPFPLFELQSHWVAGILXGRFQLPSEEEMMRDVTAFYSRLGAR 143 PL I P+ ELQ+ W + G LPS+ EMM +++ ++ R Sbjct: 373 PLGAI-MPISELQARWATLVFKGLKTLPSQSEMMTEISQVQEKMAKR 418
>IASPP_HUMAN (Q8WUF5) RelA-associated inhibitor (Inhibitor of ASPP protein)| (Protein iASPP) (PPP1R13B-like protein) (NFkB-interacting protein 1) Length = 828 Score = 32.3 bits (72), Expect = 0.44 Identities = 20/54 (37%), Positives = 24/54 (44%) Frame = +2 Query: 20 FSTIRAPEPLGGRHSXRAIPAPVRGGDDARRDGLLLTFGRSRMAPKIHPQTARS 181 +S+ PEP G R S R A DG FGRS AP +HP + S Sbjct: 70 YSSSSIPEPFGSRGSPRK----------AATDGADTPFGRSESAPTLHPYSPLS 113
>FMO5_RAT (Q8K4C0) Dimethylaniline monooxygenase [N-oxide-forming] 5 (EC| 1.14.13.8) (Hepatic flavin-containing monooxygenase 5) (FMO 5) (Dimethylaniline oxidase 5) Length = 532 Score = 32.3 bits (72), Expect = 0.44 Identities = 16/47 (34%), Positives = 23/47 (48%) Frame = +3 Query: 3 PLKVIPFPLFELQSHWVAGILXGRFQLPSEEEMMRDVTAFYSRLGAR 143 PL I P+ ELQ W + G +LPS+ EMM ++ + R Sbjct: 373 PLGAI-MPISELQGRWATQVFKGLKKLPSQSEMMAEINKTREEMAKR 418
>FMO5_MOUSE (P97872) Dimethylaniline monooxygenase [N-oxide-forming] 5 (EC| 1.14.13.8) (Hepatic flavin-containing monooxygenase 5) (FMO 5) (Dimethylaniline oxidase 5) Length = 532 Score = 32.3 bits (72), Expect = 0.44 Identities = 16/47 (34%), Positives = 23/47 (48%) Frame = +3 Query: 3 PLKVIPFPLFELQSHWVAGILXGRFQLPSEEEMMRDVTAFYSRLGAR 143 PL I P+ ELQ W + G +LPS+ EMM ++ + R Sbjct: 373 PLGAI-MPISELQGRWATQVFKGLKKLPSQSEMMAEINKAREEMAKR 418
>FMO5_HUMAN (P49326) Dimethylaniline monooxygenase [N-oxide-forming] 5 (EC| 1.14.13.8) (Hepatic flavin-containing monooxygenase 5) (FMO 5) (Dimethylaniline oxidase 5) Length = 532 Score = 32.0 bits (71), Expect = 0.58 Identities = 16/47 (34%), Positives = 23/47 (48%) Frame = +3 Query: 3 PLKVIPFPLFELQSHWVAGILXGRFQLPSEEEMMRDVTAFYSRLGAR 143 PL I P+ ELQ W + G LPS+ EMM +++ + R Sbjct: 373 PLGAI-MPISELQGRWATQVFKGLKTLPSQSEMMAEISKAQEEIDKR 418
>FMO3_MOUSE (P97501) Dimethylaniline monooxygenase [N-oxide-forming] 3 (EC| 1.14.13.8) (Hepatic flavin-containing monooxygenase 3) (FMO 3) (Dimethylaniline oxidase 3) Length = 534 Score = 31.6 bits (70), Expect = 0.76 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +3 Query: 24 PLFELQSHWVAGILXGRFQLPSEEEMMRDV 113 P+ +LQ+ W A ++ G LPS +MM D+ Sbjct: 380 PITDLQARWAAQVIKGTCTLPSVNDMMDDI 409
>FMO3_BOVIN (Q8HYJ9) Dimethylaniline monooxygenase [N-oxide-forming] 3 (EC| 1.14.13.8) (Hepatic flavin-containing monooxygenase 3) (FMO 3) (Dimethylaniline oxidase 3) Length = 532 Score = 31.2 bits (69), Expect = 0.99 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +3 Query: 24 PLFELQSHWVAGILXGRFQLPSEEEMMRDV 113 P +LQS W ++ G LPS ++MM D+ Sbjct: 380 PTTDLQSRWAVQVIKGTCPLPSVKDMMNDI 409
>IASPP_MOUSE (Q5I1X5) RelA-associated inhibitor (Inhibitor of ASPP protein)| (Protein iASPP) (PPP1R13B-like protein) (NFkB-interacting protein 1) Length = 824 Score = 31.2 bits (69), Expect = 0.99 Identities = 19/54 (35%), Positives = 24/54 (44%) Frame = +2 Query: 20 FSTIRAPEPLGGRHSXRAIPAPVRGGDDARRDGLLLTFGRSRMAPKIHPQTARS 181 +ST PE G R S + I DG+ FGRS AP +HP + S Sbjct: 70 YSTSPVPEHFGSRGSPQKIAT----------DGIEARFGRSESAPSLHPYSPLS 113
>SIP1_HUMAN (O60315) Zinc finger homeobox protein 1b (Smad-interacting protein 1)| (SMADIP1) Length = 1214 Score = 30.4 bits (67), Expect = 1.7 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = +3 Query: 174 RDREFXNEDWLAEQCRRDGPEEWRREMFAAAIEVMGERXETYRDEWDGGDY 326 ++ E ED + R+DG EE+ E + + M ET RDE + GD+ Sbjct: 1138 KEHEKEGEDGYGKLGRQDGDEEFEEEEEESENKSMDTDPETIRDEEETGDH 1188
>FMO3_RABIT (P32417) Dimethylaniline monooxygenase [N-oxide-forming] 3 (EC| 1.14.13.8) (Hepatic flavin-containing monooxygenase 3) (FMO 3) (Dimethylaniline oxidase 3) (FMO 1D1) (FMO form 2) (FMO II) Length = 530 Score = 29.6 bits (65), Expect = 2.9 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +3 Query: 24 PLFELQSHWVAGILXGRFQLPSEEEMMRDV 113 P +LQ+ W A ++ G LP ++MM D+ Sbjct: 379 PTTDLQARWAAQVIKGTCTLPPVKDMMNDI 408
>BMP4_DAMDA (Q29607) Bone morphogenetic protein 4 precursor (BMP-4)| Length = 408 Score = 29.6 bits (65), Expect = 2.9 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 12/56 (21%) Frame = +2 Query: 53 GRHSXRAIPAPVRGGDDARRDGLLLTFG------------RSRMAPKIHPQTARSR 184 G+H + P GD A+ LL+TFG R++ +PK HPQ AR + Sbjct: 249 GQHVRISRSLPQGSGDWAQLRPLLVTFGHDGRGHALTRHRRAKRSPKHHPQRARKK 304
>FMO3_RAT (Q9EQ76) Dimethylaniline monooxygenase [N-oxide-forming] 3 (EC| 1.14.13.8) (Hepatic flavin-containing monooxygenase 3) (FMO 3) (Dimethylaniline oxidase 3) Length = 531 Score = 29.6 bits (65), Expect = 2.9 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +3 Query: 24 PLFELQSHWVAGILXGRFQLPSEEEMMRDV 113 P +LQ+ W A ++ G LPS +MM D+ Sbjct: 380 PTTDLQARWAAQVIRGTCILPSVNDMMDDI 409
>TAF1L_HUMAN (Q8IZX4) Transcription initiation factor TFIID 210 kDa subunit| (TBP-associated factor 210 kDa) (TAF(II)210) (TBP-associated factor 1-like) Length = 1826 Score = 29.3 bits (64), Expect = 3.7 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%) Frame = +3 Query: 36 LQSHWVAGILXGRFQLPSEEEMMRDVT-----AFYSRLGARGWPRRYTHRLRDREFXNED 200 + S+W +L F+LP+EEE+ V+ A+YS + A+ RL+D + + Sbjct: 876 MDSNW--WVLKSDFRLPTEEEIRAKVSPEQCCAYYSMIAAK-------QRLKDAGYGEKS 926 Query: 201 WLAEQCRRDGPEEWRREMFAAAIE 272 + A PEE E F I+ Sbjct: 927 FFA-------PEEENEEDFQMKID 943
>FMO3_CANFA (Q95LA1) Dimethylaniline monooxygenase [N-oxide-forming] 3 (EC| 1.14.13.8) (Hepatic flavin-containing monooxygenase 3) (FMO 3) (Dimethylaniline oxidase 3) Length = 531 Score = 29.3 bits (64), Expect = 3.7 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +3 Query: 24 PLFELQSHWVAGILXGRFQLPSEEEMMRDV 113 P +LQ+ W ++ G LPS +MM D+ Sbjct: 379 PTTDLQARWAVQVIKGTCTLPSVTDMMNDI 408
>BMP4_MOUSE (P21275) Bone morphogenetic protein 4 precursor (BMP-4) (BMP-2B)| Length = 408 Score = 28.9 bits (63), Expect = 4.9 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 11/55 (20%) Frame = +2 Query: 53 GRHSXRAIPAPVRGGDDARRDGLLLTFG-----------RSRMAPKIHPQTARSR 184 G+H + P GD A+ LL+TFG R++ +PK HPQ +R + Sbjct: 250 GQHVRISRSLPQGSGDWAQLRPLLVTFGHDGRGHTLTRRRAKRSPKHHPQRSRKK 304
>SIP1_MOUSE (Q9R0G7) Zinc finger homeobox protein 1b (Smad-interacting protein 1)| Length = 1215 Score = 28.9 bits (63), Expect = 4.9 Identities = 17/51 (33%), Positives = 25/51 (49%) Frame = +3 Query: 174 RDREFXNEDWLAEQCRRDGPEEWRREMFAAAIEVMGERXETYRDEWDGGDY 326 ++ E E+ + RRDG EE E + + M ET RDE + GD+ Sbjct: 1138 KEHEKEGEEGYGKLRRRDGDEEEEEEEEESENKSMDTDPETIRDEEETGDH 1188
>SYI_MYCMO (Q6KHN7) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 885 Score = 28.5 bits (62), Expect = 6.4 Identities = 19/75 (25%), Positives = 31/75 (41%) Frame = +3 Query: 90 EEEMMRDVTAFYSRLGARGWPRRYTHRLRDREFXNEDWLAEQCRRDGPEEWRREMFAAAI 269 EEE+ + S+ G W + T L ++ N++W E +D + W F + Sbjct: 479 EEELFDHIIDLVSKYGTDIWFEKSTDELLPEKYKNKNWTKE---KDIMDVW----FDSGT 531 Query: 270 EVMGERXETYRDEWD 314 MG + E WD Sbjct: 532 TSMGVKIEGAPVPWD 546
>SYF1_KLULA (Q6CYA2) Pre-mRNA-splicing factor SYF1| Length = 798 Score = 28.1 bits (61), Expect = 8.3 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Frame = +3 Query: 90 EEEMMRDVTAFYSRLGARGWPRRYTHRLRDREFXNEDWLAEQCRRDGPEEWR--REMFAA 263 EE++ + R A W R + + N DWL E+C ++ ++W +E Sbjct: 9 EEDIPFEYGVVRERDNAVSWSRYLATKRSAGDELNLDWLYERCLKEIKDDWHLWKEFLKW 68 Query: 264 AIEVMGE 284 IE++ + Sbjct: 69 RIELLND 75
>RAD4_YEAST (P14736) DNA repair protein RAD4| Length = 754 Score = 28.1 bits (61), Expect = 8.3 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 4/78 (5%) Frame = +3 Query: 90 EEEMMRDVTAFYSRLGARGWPRRYTH----RLRDREFXNEDWLAEQCRRDGPEEWRREMF 257 E M+R V A+ + G R RRY ++R R +D+ E+W R++ Sbjct: 356 ERNMLRYVIAYDRKYGCRDVTRRYAQWMNSKVRKRRITKDDF---------GEKWFRKVI 406 Query: 258 AAAIEVMGERXETYRDEW 311 A + + Y D++ Sbjct: 407 TALHHRKRTKIDDYEDQY 424
>MURD_ANASP (Q8YPS9) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 462 Score = 28.1 bits (61), Expect = 8.3 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 8/63 (12%) Frame = +3 Query: 117 AFYSRLGARGWPRRYTHRLRDRE--------FXNEDWLAEQCRRDGPEEWRREMFAAAIE 272 A+ S++GA WP Y ++ +E + + W+ EQ P+ R + A+A+ Sbjct: 217 AYLSKIGASHWPDAYWTSVQGKESLLGEKGFYIEDGWVVEQLPNSPPQ---RIVEASALR 273 Query: 273 VMG 281 ++G Sbjct: 274 MVG 276 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,565,221 Number of Sequences: 219361 Number of extensions: 921337 Number of successful extensions: 2532 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 2497 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2530 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
